View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0866_low_32 (Length: 278)
Name: NF0866_low_32
Description: NF0866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0866_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 38052476 - 38052220
Alignment:
| Q |
1 |
ttttttataaggtggtgggccatgttgttctgacaaaccaccttgttgaccccaccactgttctgttccattaggccaccatggaggagccaaacctatt |
100 |
Q |
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| T |
38052476 |
ttttttataaggtggtgggccatgttgttctgacaaaccaccttgttgaccccaccactgttctgttccattaggccaccatggaggagccaaacctatt |
38052377 |
T |
|
| Q |
101 |
tcaagagggaatcttctttgtggtggcacacagtgttgcattagagctgaaagaagagaacctaaagtagtatcttgcaagtcataaagtaaatgcatat |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38052376 |
tcaagagggaatcttctttgtggtggtacacagtgttgcattagagctgaaagaagagaacctaaagtagtatcttgcaagtcataaagtaaatgcatat |
38052277 |
T |
|
| Q |
201 |
atgatgaaatgggatctaataattctaactcttgttgattttctaagagtgatgatg |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38052276 |
atgatgaaatgggatctaataattctaactcttgttgattttctaagagtgatgatg |
38052220 |
T |
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