View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0866_low_40 (Length: 252)

Name: NF0866_low_40
Description: NF0866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0866_low_40
NF0866_low_40
[»] chr3 (5 HSPs)
chr3 (28-250)||(26537235-26537462)
chr3 (202-250)||(3026892-3026940)
chr3 (119-197)||(19596501-19596579)
chr3 (202-250)||(25529928-25529976)
chr3 (202-250)||(55196574-55196622)
[»] chr7 (7 HSPs)
chr7 (63-115)||(31742998-31743050)
chr7 (63-115)||(33049235-33049287)
chr7 (202-250)||(38758328-38758376)
chr7 (155-197)||(39653555-39653597)
chr7 (155-197)||(45435421-45435463)
chr7 (197-250)||(706738-706791)
chr7 (202-250)||(708163-708211)
[»] chr1 (5 HSPs)
chr1 (202-250)||(13222914-13222962)
chr1 (202-249)||(26734426-26734473)
chr1 (202-232)||(43883834-43883864)
chr1 (202-250)||(12097951-12097999)
chr1 (202-250)||(32847814-32847862)
[»] chr2 (6 HSPs)
chr2 (192-249)||(22060172-22060229)
chr2 (202-250)||(28165658-28165706)
chr2 (195-249)||(40303286-40303340)
chr2 (202-252)||(44906144-44906194)
chr2 (205-250)||(28167341-28167386)
chr2 (202-250)||(5696380-5696428)
[»] chr4 (7 HSPs)
chr4 (202-250)||(11148350-11148398)
chr4 (204-250)||(28426836-28426882)
chr4 (202-252)||(34539807-34539856)
chr4 (197-250)||(22307666-22307719)
chr4 (202-250)||(2671541-2671589)
chr4 (202-250)||(2672974-2673022)
chr4 (202-250)||(34538126-34538174)
[»] chr8 (5 HSPs)
chr8 (191-250)||(7272889-7272948)
chr8 (197-250)||(17707459-17707512)
chr8 (193-250)||(39886087-39886144)
chr8 (202-250)||(17706165-17706213)
chr8 (202-250)||(36899898-36899946)
[»] chr5 (1 HSPs)
chr5 (202-249)||(38626182-38626229)
[»] scaffold0129 (1 HSPs)
scaffold0129 (192-249)||(4269-4326)


Alignment Details
Target: chr3 (Bit Score: 164; Significance: 9e-88; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 28 - 250
Target Start/End: Original strand, 26537235 - 26537462
Alignment:
28 catatgatatgttatggattgcagttattgtagtatgaattaatcatgacattgcatagctcttaaataatgtataataacttaaatatttgatagattt 127  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
26537235 catatgatacgttatggattgcagttactgtagtatgaattaatcatgacattgcatagctcttaaataatgtataataacttaaatctttcatagattt 26537334  T
128 aaagttctaaactaaagaaagatattaaaagag-----ataacattatgtaattcatgttcaaatatgtattaaatatgggcttaaataagtaaaaggtc 222  Q
     ||||||||||||| ||||||||||||||||||     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
26537335 gaagttctaaactagagaaagatattaaaagagataacataacattatgtaattcatattcaaatatgtattaaatatgggcttaaataagtaaaaggtc 26537434  T
223 catgtaagttagcatatttttggtttta 250  Q
    ||| |||| |||||  ||||||||||||    
26537435 catataagctagcacgtttttggtttta 26537462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 3026940 - 3026892
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||||||||||||||| |||||||| |||  ||||||||||||    
3026940 ggcttaaataagtaaaaggtccctgtaagttggcacgtttttggtttta 3026892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 19596501 - 19596579
Alignment:
119 gatagatttaaagttctaaactaaagaaagatattaaaagagataacattatgtaattcatgttcaaatatgtattaaa 197  Q
    ||||||| | ||||||||||||| ||||| | | ||||  |||||||||||||||| | |||||||||| |||| ||||    
19596501 gatagatctgaagttctaaactagagaaatagactaaagaagataacattatgtaacttatgttcaaatttgtactaaa 19596579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 25529976 - 25529928
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||||||||||||||| |||||||| ||   ||||||||||||    
25529976 ggcttaaataagtaaaaggtccttgtaagttggcgcgtttttggtttta 25529928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 55196574 - 55196622
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||||| ||||||||| |||||||| ||  |||||||||||||    
55196574 ggcttaaataagaaaaaggtccttgtaagttcgcgcatttttggtttta 55196622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 31743050 - 31742998
Alignment:
63 tgaattaatcatgacattgcatagctcttaaataatgtataataacttaaata 115  Q
    |||||||||||  |||||||| || ||||||||||||||||||||||||||||    
31743050 tgaattaatcacaacattgcacagttcttaaataatgtataataacttaaata 31742998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 33049287 - 33049235
Alignment:
63 tgaattaatcatgacattgcatagctcttaaataatgtataataacttaaata 115  Q
    |||||||||||  |||||||| | |||||||||||||||||||||||||||||    
33049287 tgaattaatcaaaacattgcacaactcttaaataatgtataataacttaaata 33049235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 38758376 - 38758328
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||||||||||||||| |||||||||||   ||||||||||||    
38758376 ggcttaaataagtaaaaggtccctgtaagttagcgcgtttttggtttta 38758328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 39653555 - 39653597
Alignment:
155 aaagagataacattatgtaattcatgttcaaatatgtattaaa 197  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||    
39653555 aaagagataacattatgtaatttatgatcaaatatgtactaaa 39653597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 45435463 - 45435421
Alignment:
155 aaagagataacattatgtaattcatgttcaaatatgtattaaa 197  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||    
45435463 aaagagataacattatgtaatttatgatcaaatatgtactaaa 45435421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 706738 - 706791
Alignment:
197 atatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||| |||||||||| ||||||||||| ||||| ||||| | ||||||||||||    
706738 atataggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggtttta 706791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 708211 - 708163
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||| ||||||||||| ||||| ||||| | ||||||||||||    
708211 ggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggtttta 708163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 13222914 - 13222962
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||    
13222914 ggcttaaataagtaaaaggtccctgtaagttagcacgtttttggtttta 13222962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 26734426 - 26734473
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttt 249  Q
    |||||||||| |||||||||||||||||||| ||  ||||||||||||    
26734426 ggcttaaatatgtaaaaggtccatgtaagttcgcgcatttttggtttt 26734473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 232
Target Start/End: Complemental strand, 43883864 - 43883834
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagtt 232  Q
    |||||||||||||||||||||||||||||||    
43883864 ggcttaaataagtaaaaggtccatgtaagtt 43883834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 12097999 - 12097951
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    ||||||||||||||||||||||  ||||||| ||  |||||||||||||    
12097999 ggcttaaataagtaaaaggtccccgtaagttcgcgcatttttggtttta 12097951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 32847814 - 32847862
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||||||||||||||| |||||||| ||   ||||||||||||    
32847814 ggcttaaataagtaaaaggtccctgtaagttggcgcgtttttggtttta 32847862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 22060229 - 22060172
Alignment:
192 attaaatatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttt 249  Q
    |||||| || |||||||||| |||||||||||||||||||| ||  ||||||||||||    
22060229 attaaagattggcttaaatatgtaaaaggtccatgtaagttcgcgcatttttggtttt 22060172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 28165658 - 28165706
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||| |||||||||||||||||||||||   ||||||||||||    
28165658 ggcttaaatatgtaaaaggtccatgtaagttagcgcgtttttggtttta 28165706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 40303286 - 40303340
Alignment:
195 aaatatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttt 249  Q
    |||||| |||||||||| ||||||||||| |||||||| || | |||||||||||    
40303286 aaatataggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggtttt 40303340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 44906194 - 44906144
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggttttaat 252  Q
    |||||||||||||||||||||| | |||||||||   ||||||||||||||    
44906194 ggcttaaataagtaaaaggtccctataagttagcgcgtttttggttttaat 44906144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 28167386 - 28167341
Alignment:
205 ttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    ||||||||||||||||||| |||||||||||   ||||||||||||    
28167386 ttaaataagtaaaaggtccctgtaagttagcgcgtttttggtttta 28167341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 5696428 - 5696380
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||||| |||||||||||||||||| ||  |||||| ||||||    
5696428 ggcttaaataagaaaaaggtccatgtaagtttgcgcatttttagtttta 5696380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 11148350 - 11148398
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||||||||||||||| |||||||||||   ||||||||||||    
11148350 ggcttaaataagtaaaaggtccctgtaagttagcgcgtttttggtttta 11148398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 28426836 - 28426882
Alignment:
204 cttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    ||||||||||||||||||||||||||||| ||  |||||| ||||||    
28426836 cttaaataagtaaaaggtccatgtaagttggcgcattttttgtttta 28426882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 34539856 - 34539807
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggttttaat 252  Q
    |||||||||||||||| |||||||||||||||||   ||||||||||||||    
34539856 ggcttaaataagtaaa-ggtccatgtaagttagcgcgtttttggttttaat 34539807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 22307666 - 22307719
Alignment:
197 atatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||| |||||||||| | ||||||||| |||||||| |||| ||||||||||||    
22307666 atataggcttaaatatgcaaaaggtccctgtaagttcgcatgtttttggtttta 22307719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 2671541 - 2671589
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||||| ||||||||| |||||||| ||  |||||||||||||    
2671541 ggcttaaataagaaaaaggtccctgtaagttcgcgcatttttggtttta 2671589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 2673022 - 2672974
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||||||||||| || ||||||||| ||  |||||||||||||    
2673022 ggcttaaataagtaaaagatctatgtaagttggcgcatttttggtttta 2672974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 34538126 - 34538174
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||| |||||||||||  |||||||||||  ||||||||||||    
34538126 ggcttaaatatgtaaaaggtcccggtaagttagcacgtttttggtttta 34538174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000005; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 7272889 - 7272948
Alignment:
191 tattaaatatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    ||||| |||| |||||||||||||||||||||  |||||||| ||  |||||||||||||    
7272889 tattatatataggcttaaataagtaaaaggtctctgtaagttggcgcatttttggtttta 7272948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 17707512 - 17707459
Alignment:
197 atatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||| |||||||||| ||||| ||||||||||| ||||| | ||||||||||||    
17707512 atataggcttaaatatgtaaatggtccatgtaatttagcgtgtttttggtttta 17707459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 39886144 - 39886087
Alignment:
193 ttaaatatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||| |||||||||| ||||| ||||| |||||||| || | ||||||||||||    
39886144 ttaaatataggcttaaatatgtaaatggtccctgtaagttcgcgtgtttttggtttta 39886087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 17706165 - 17706213
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||| ||||||||||| ||||| ||||| | ||||||||||||    
17706165 ggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggtttta 17706213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 36899898 - 36899946
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta 250  Q
    |||||||||| ||||||||||| ||||| ||||| | ||||||||||||    
36899898 ggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggtttta 36899946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 38626229 - 38626182
Alignment:
202 ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttt 249  Q
    |||||||||| ||||||||||| |||||||| |||| |||||||||||    
38626229 ggcttaaatatgtaaaaggtccctgtaagttcgcatgtttttggtttt 38626182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 4326 - 4269
Alignment:
192 attaaatatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttt 249  Q
    ||||||| | |||||||||| ||||||||||| |||||||| ||  ||||||||||||    
4326 attaaatttaggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggtttt 4269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 3815 times since January 2019
Visitors: 6175