View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0866_low_40 (Length: 252)
Name: NF0866_low_40
Description: NF0866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0866_low_40 |
 |  |
|
[»] scaffold0129 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 164; Significance: 9e-88; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 28 - 250
Target Start/End: Original strand, 26537235 - 26537462
Alignment:
Q |
28 |
catatgatatgttatggattgcagttattgtagtatgaattaatcatgacattgcatagctcttaaataatgtataataacttaaatatttgatagattt |
127 |
Q |
|
|
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
T |
26537235 |
catatgatacgttatggattgcagttactgtagtatgaattaatcatgacattgcatagctcttaaataatgtataataacttaaatctttcatagattt |
26537334 |
T |
 |
Q |
128 |
aaagttctaaactaaagaaagatattaaaagag-----ataacattatgtaattcatgttcaaatatgtattaaatatgggcttaaataagtaaaaggtc |
222 |
Q |
|
|
||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
26537335 |
gaagttctaaactagagaaagatattaaaagagataacataacattatgtaattcatattcaaatatgtattaaatatgggcttaaataagtaaaaggtc |
26537434 |
T |
 |
Q |
223 |
catgtaagttagcatatttttggtttta |
250 |
Q |
|
|
||| |||| ||||| |||||||||||| |
|
|
T |
26537435 |
catataagctagcacgtttttggtttta |
26537462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 3026940 - 3026892
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||||||||||||||| |||||||| ||| |||||||||||| |
|
|
T |
3026940 |
ggcttaaataagtaaaaggtccctgtaagttggcacgtttttggtttta |
3026892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 19596501 - 19596579
Alignment:
Q |
119 |
gatagatttaaagttctaaactaaagaaagatattaaaagagataacattatgtaattcatgttcaaatatgtattaaa |
197 |
Q |
|
|
||||||| | ||||||||||||| ||||| | | |||| |||||||||||||||| | |||||||||| |||| |||| |
|
|
T |
19596501 |
gatagatctgaagttctaaactagagaaatagactaaagaagataacattatgtaacttatgttcaaatttgtactaaa |
19596579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 25529976 - 25529928
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||||||||||||||| |||||||| || |||||||||||| |
|
|
T |
25529976 |
ggcttaaataagtaaaaggtccttgtaagttggcgcgtttttggtttta |
25529928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 55196574 - 55196622
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||||| ||||||||| |||||||| || ||||||||||||| |
|
|
T |
55196574 |
ggcttaaataagaaaaaggtccttgtaagttcgcgcatttttggtttta |
55196622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 31743050 - 31742998
Alignment:
Q |
63 |
tgaattaatcatgacattgcatagctcttaaataatgtataataacttaaata |
115 |
Q |
|
|
||||||||||| |||||||| || |||||||||||||||||||||||||||| |
|
|
T |
31743050 |
tgaattaatcacaacattgcacagttcttaaataatgtataataacttaaata |
31742998 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 33049287 - 33049235
Alignment:
Q |
63 |
tgaattaatcatgacattgcatagctcttaaataatgtataataacttaaata |
115 |
Q |
|
|
||||||||||| |||||||| | ||||||||||||||||||||||||||||| |
|
|
T |
33049287 |
tgaattaatcaaaacattgcacaactcttaaataatgtataataacttaaata |
33049235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 38758376 - 38758328
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
T |
38758376 |
ggcttaaataagtaaaaggtccctgtaagttagcgcgtttttggtttta |
38758328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 39653555 - 39653597
Alignment:
Q |
155 |
aaagagataacattatgtaattcatgttcaaatatgtattaaa |
197 |
Q |
|
|
|||||||||||||||||||||| ||| ||||||||||| |||| |
|
|
T |
39653555 |
aaagagataacattatgtaatttatgatcaaatatgtactaaa |
39653597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 45435463 - 45435421
Alignment:
Q |
155 |
aaagagataacattatgtaattcatgttcaaatatgtattaaa |
197 |
Q |
|
|
|||||||||||||||||||||| ||| ||||||||||| |||| |
|
|
T |
45435463 |
aaagagataacattatgtaatttatgatcaaatatgtactaaa |
45435421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 706738 - 706791
Alignment:
Q |
197 |
atatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||| |||||||||| ||||||||||| ||||| ||||| | |||||||||||| |
|
|
T |
706738 |
atataggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggtttta |
706791 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 708211 - 708163
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||| ||||||||||| ||||| ||||| | |||||||||||| |
|
|
T |
708211 |
ggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggtttta |
708163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 13222914 - 13222962
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||||||||||||||| |||||||||||| |||||||||||| |
|
|
T |
13222914 |
ggcttaaataagtaaaaggtccctgtaagttagcacgtttttggtttta |
13222962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 26734426 - 26734473
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttt |
249 |
Q |
|
|
|||||||||| |||||||||||||||||||| || |||||||||||| |
|
|
T |
26734426 |
ggcttaaatatgtaaaaggtccatgtaagttcgcgcatttttggtttt |
26734473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 232
Target Start/End: Complemental strand, 43883864 - 43883834
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagtt |
232 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
43883864 |
ggcttaaataagtaaaaggtccatgtaagtt |
43883834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 12097999 - 12097951
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||||||||||||||| ||||||| || ||||||||||||| |
|
|
T |
12097999 |
ggcttaaataagtaaaaggtccccgtaagttcgcgcatttttggtttta |
12097951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 32847814 - 32847862
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||||||||||||||| |||||||| || |||||||||||| |
|
|
T |
32847814 |
ggcttaaataagtaaaaggtccctgtaagttggcgcgtttttggtttta |
32847862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 22060229 - 22060172
Alignment:
Q |
192 |
attaaatatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttt |
249 |
Q |
|
|
|||||| || |||||||||| |||||||||||||||||||| || |||||||||||| |
|
|
T |
22060229 |
attaaagattggcttaaatatgtaaaaggtccatgtaagttcgcgcatttttggtttt |
22060172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 28165658 - 28165706
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
T |
28165658 |
ggcttaaatatgtaaaaggtccatgtaagttagcgcgtttttggtttta |
28165706 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 40303286 - 40303340
Alignment:
Q |
195 |
aaatatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttt |
249 |
Q |
|
|
|||||| |||||||||| ||||||||||| |||||||| || | ||||||||||| |
|
|
T |
40303286 |
aaatataggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggtttt |
40303340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 44906194 - 44906144
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggttttaat |
252 |
Q |
|
|
|||||||||||||||||||||| | ||||||||| |||||||||||||| |
|
|
T |
44906194 |
ggcttaaataagtaaaaggtccctataagttagcgcgtttttggttttaat |
44906144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 28167386 - 28167341
Alignment:
Q |
205 |
ttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
T |
28167386 |
ttaaataagtaaaaggtccctgtaagttagcgcgtttttggtttta |
28167341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 5696428 - 5696380
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||||| |||||||||||||||||| || |||||| |||||| |
|
|
T |
5696428 |
ggcttaaataagaaaaaggtccatgtaagtttgcgcatttttagtttta |
5696380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 11148350 - 11148398
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
T |
11148350 |
ggcttaaataagtaaaaggtccctgtaagttagcgcgtttttggtttta |
11148398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 28426836 - 28426882
Alignment:
Q |
204 |
cttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
||||||||||||||||||||||||||||| || |||||| |||||| |
|
|
T |
28426836 |
cttaaataagtaaaaggtccatgtaagttggcgcattttttgtttta |
28426882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 34539856 - 34539807
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggttttaat |
252 |
Q |
|
|
|||||||||||||||| ||||||||||||||||| |||||||||||||| |
|
|
T |
34539856 |
ggcttaaataagtaaa-ggtccatgtaagttagcgcgtttttggttttaat |
34539807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 22307666 - 22307719
Alignment:
Q |
197 |
atatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||| |||||||||| | ||||||||| |||||||| |||| |||||||||||| |
|
|
T |
22307666 |
atataggcttaaatatgcaaaaggtccctgtaagttcgcatgtttttggtttta |
22307719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 2671541 - 2671589
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||||| ||||||||| |||||||| || ||||||||||||| |
|
|
T |
2671541 |
ggcttaaataagaaaaaggtccctgtaagttcgcgcatttttggtttta |
2671589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 2673022 - 2672974
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||||||||||| || ||||||||| || ||||||||||||| |
|
|
T |
2673022 |
ggcttaaataagtaaaagatctatgtaagttggcgcatttttggtttta |
2672974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 34538126 - 34538174
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||| ||||||||||| ||||||||||| |||||||||||| |
|
|
T |
34538126 |
ggcttaaatatgtaaaaggtcccggtaagttagcacgtttttggtttta |
34538174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 32; Significance: 0.000000005; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 7272889 - 7272948
Alignment:
Q |
191 |
tattaaatatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
||||| |||| ||||||||||||||||||||| |||||||| || ||||||||||||| |
|
|
T |
7272889 |
tattatatataggcttaaataagtaaaaggtctctgtaagttggcgcatttttggtttta |
7272948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 17707512 - 17707459
Alignment:
Q |
197 |
atatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||| |||||||||| ||||| ||||||||||| ||||| | |||||||||||| |
|
|
T |
17707512 |
atataggcttaaatatgtaaatggtccatgtaatttagcgtgtttttggtttta |
17707459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 39886144 - 39886087
Alignment:
Q |
193 |
ttaaatatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||| |||||||||| ||||| ||||| |||||||| || | |||||||||||| |
|
|
T |
39886144 |
ttaaatataggcttaaatatgtaaatggtccctgtaagttcgcgtgtttttggtttta |
39886087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 17706165 - 17706213
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||| ||||||||||| ||||| ||||| | |||||||||||| |
|
|
T |
17706165 |
ggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggtttta |
17706213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 36899898 - 36899946
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttta |
250 |
Q |
|
|
|||||||||| ||||||||||| ||||| ||||| | |||||||||||| |
|
|
T |
36899898 |
ggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggtttta |
36899946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 38626229 - 38626182
Alignment:
Q |
202 |
ggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttt |
249 |
Q |
|
|
|||||||||| ||||||||||| |||||||| |||| ||||||||||| |
|
|
T |
38626229 |
ggcttaaatatgtaaaaggtccctgtaagttcgcatgtttttggtttt |
38626182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0129 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0129
Description:
Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 4326 - 4269
Alignment:
Q |
192 |
attaaatatgggcttaaataagtaaaaggtccatgtaagttagcatatttttggtttt |
249 |
Q |
|
|
||||||| | |||||||||| ||||||||||| |||||||| || |||||||||||| |
|
|
T |
4326 |
attaaatttaggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggtttt |
4269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 3815 times since January 2019
Visitors: 6175