View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0867_high_15 (Length: 363)

Name: NF0867_high_15
Description: NF0867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0867_high_15
NF0867_high_15
[»] chr6 (33 HSPs)
chr6 (1-353)||(30487096-30487449)
chr6 (1-102)||(31849210-31849311)
chr6 (3-147)||(9721134-9721280)
chr6 (3-140)||(9719034-9719173)
chr6 (2-149)||(1300721-1300870)
chr6 (5-143)||(10818320-10818460)
chr6 (2-96)||(4097561-4097655)
chr6 (1-135)||(10348808-10348942)
chr6 (29-141)||(1390447-1390561)
chr6 (2-142)||(21606855-21606987)
chr6 (7-142)||(33236057-33236193)
chr6 (8-101)||(2900017-2900110)
chr6 (1-141)||(34176435-34176576)
chr6 (2-142)||(665842-665984)
chr6 (2-140)||(5585304-5585445)
chr6 (2-142)||(14515572-14515714)
chr6 (7-138)||(19278039-19278176)
chr6 (2-143)||(16737996-16738139)
chr6 (72-140)||(4097684-4097754)
chr6 (29-94)||(33041590-33041655)
chr6 (41-142)||(9298625-9298734)
chr6 (2-77)||(13583820-13583895)
chr6 (77-142)||(9051710-9051775)
chr6 (78-140)||(26318482-26318546)
chr6 (113-148)||(4097504-4097539)
chr6 (103-142)||(31799131-31799170)
chr6 (2-96)||(1395737-1395831)
chr6 (3-85)||(2892664-2892745)
chr6 (3-88)||(2892900-2892985)
chr6 (73-140)||(31849113-31849182)
chr6 (72-142)||(10818230-10818302)
chr6 (61-94)||(12811034-12811067)
chr6 (102-142)||(14515474-14515514)
[»] chr2 (42 HSPs)
chr2 (1-142)||(23748195-23748338)
chr2 (1-142)||(9631660-9631803)
chr2 (2-141)||(40022471-40022615)
chr2 (2-142)||(34209565-34209707)
chr2 (2-142)||(36347542-36347684)
chr2 (2-105)||(42316804-42316907)
chr2 (2-96)||(15224743-15224837)
chr2 (2-102)||(39732772-39732872)
chr2 (6-143)||(36046204-36046343)
chr2 (2-83)||(17379913-17379994)
chr2 (2-142)||(19566821-19566964)
chr2 (2-96)||(16565878-16565972)
chr2 (2-140)||(31795772-31795912)
chr2 (5-96)||(36566899-36566991)
chr2 (7-142)||(35736297-35736430)
chr2 (2-137)||(12541867-12541999)
chr2 (49-102)||(1583225-1583278)
chr2 (2-47)||(2241511-2241556)
chr2 (43-141)||(8426881-8426981)
chr2 (6-94)||(9427090-9427179)
chr2 (2-55)||(37739981-37740034)
chr2 (73-138)||(8427043-8427110)
chr2 (43-142)||(7681386-7681485)
chr2 (2-142)||(39821770-39821902)
chr2 (16-94)||(27926668-27926746)
chr2 (72-142)||(22356175-22356247)
chr2 (77-141)||(36046378-36046443)
chr2 (77-142)||(15224870-15224937)
chr2 (5-88)||(28262500-28262583)
chr2 (78-126)||(39821686-39821736)
chr2 (67-142)||(17380007-17380084)
chr2 (2-40)||(18811429-18811467)
chr2 (51-142)||(41778774-41778867)
chr2 (2-95)||(12751916-12752009)
chr2 (76-141)||(3094528-3094595)
chr2 (1-41)||(6721726-6721766)
chr2 (102-142)||(17379847-17379887)
chr2 (77-142)||(34187576-34187643)
chr2 (102-142)||(35736176-35736216)
chr2 (77-142)||(36347717-36347784)
chr2 (77-142)||(42296479-42296546)
chr2 (77-142)||(45257483-45257550)
[»] chr4 (43 HSPs)
chr4 (1-142)||(49735469-49735612)
chr4 (5-142)||(45741994-45742133)
chr4 (2-142)||(54935169-54935312)
chr4 (2-141)||(27735846-27735987)
chr4 (4-142)||(31348317-31348462)
chr4 (2-142)||(54320535-54320677)
chr4 (5-142)||(41174449-41174588)
chr4 (1-139)||(29798384-29798521)
chr4 (2-142)||(5730831-5730973)
chr4 (2-135)||(17938115-17938250)
chr4 (6-142)||(24565347-24565485)
chr4 (4-102)||(2247846-2247944)
chr4 (4-142)||(1968352-1968500)
chr4 (49-142)||(6938395-6938490)
chr4 (89-148)||(53260713-53260772)
chr4 (2-102)||(46007742-46007844)
chr4 (7-88)||(16400906-16400987)
chr4 (2-82)||(26167038-26167118)
chr4 (2-102)||(34110906-34111005)
chr4 (2-135)||(35248787-35248922)
chr4 (2-96)||(36151677-36151770)
chr4 (2-88)||(45132559-45132644)
chr4 (63-142)||(37711285-37711366)
chr4 (5-49)||(2917059-2917103)
chr4 (2-94)||(6891461-6891553)
chr4 (2-94)||(47433760-47433851)
chr4 (77-147)||(54935063-54935136)
chr4 (73-140)||(46007873-46007942)
chr4 (77-142)||(54320436-54320502)
chr4 (77-142)||(1968535-1968602)
chr4 (6-94)||(36278356-36278444)
chr4 (77-142)||(56135750-56135817)
chr4 (62-142)||(37761625-37761707)
chr4 (102-140)||(4437428-4437466)
chr4 (2-44)||(37711244-37711286)
chr4 (2-96)||(44784093-44784186)
chr4 (62-141)||(54576329-54576410)
chr4 (76-142)||(22186720-22186788)
chr4 (80-142)||(31348500-31348564)
chr4 (77-142)||(7977673-7977740)
chr4 (73-142)||(47433881-47433952)
chr4 (102-142)||(49735695-49735735)
chr4 (77-142)||(54576505-54576572)
[»] chr1 (32 HSPs)
chr1 (1-142)||(38509895-38510038)
chr1 (2-142)||(2858933-2859075)
chr1 (2-142)||(40094934-40095076)
chr1 (9-142)||(35349467-35349598)
chr1 (2-142)||(41498505-41498648)
chr1 (2-142)||(30010433-30010575)
chr1 (2-139)||(8529900-8530039)
chr1 (2-142)||(32951322-32951461)
chr1 (1-141)||(12234110-12234252)
chr1 (1-105)||(36285614-36285718)
chr1 (2-93)||(50744332-50744424)
chr1 (1-140)||(7444595-7444736)
chr1 (2-96)||(51597769-51597863)
chr1 (7-140)||(20576136-20576269)
chr1 (1-140)||(26940847-26940987)
chr1 (5-139)||(10391976-10392108)
chr1 (5-91)||(49946642-49946728)
chr1 (2-91)||(45585739-45585828)
chr1 (30-142)||(28770852-28770964)
chr1 (2-76)||(42230639-42230713)
chr1 (2-102)||(41676380-41676482)
chr1 (28-142)||(43551997-43552109)
chr1 (102-142)||(20607420-20607460)
chr1 (77-142)||(35349638-35349705)
chr1 (73-142)||(40095106-40095177)
chr1 (78-142)||(41498405-41498471)
chr1 (76-142)||(525275-525343)
chr1 (102-139)||(35513000-35513037)
chr1 (2-39)||(44211011-44211048)
chr1 (77-142)||(12234011-12234078)
chr1 (102-142)||(26324015-26324055)
chr1 (102-142)||(30010333-30010373)
[»] chr7 (45 HSPs)
chr7 (5-142)||(4833532-4833671)
chr7 (8-142)||(18231693-18231829)
chr7 (2-142)||(40196533-40196675)
chr7 (2-142)||(41496958-41497100)
chr7 (2-140)||(34235010-34235150)
chr7 (2-102)||(33655151-33655251)
chr7 (5-148)||(47390959-47391105)
chr7 (2-142)||(13425121-13425263)
chr7 (3-138)||(10315735-10315872)
chr7 (2-96)||(24970214-24970308)
chr7 (2-88)||(22163167-22163252)
chr7 (2-88)||(22221875-22221960)
chr7 (2-102)||(1051543-1051641)
chr7 (2-142)||(13770949-13771089)
chr7 (2-142)||(25887293-25887435)
chr7 (27-140)||(42306456-42306571)
chr7 (9-142)||(30592254-30592389)
chr7 (2-70)||(37417708-37417776)
chr7 (9-141)||(45940658-45940792)
chr7 (40-142)||(31553186-31553287)
chr7 (62-142)||(33519209-33519291)
chr7 (2-44)||(31571569-31571611)
chr7 (63-142)||(48881559-48881640)
chr7 (2-55)||(34228408-34228461)
chr7 (2-140)||(43230337-43230476)
chr7 (77-142)||(37925842-37925909)
chr7 (77-142)||(39856041-39856108)
chr7 (2-142)||(17852972-17853103)
chr7 (2-142)||(41008284-41008421)
chr7 (4-70)||(47229907-47229973)
chr7 (27-141)||(32872788-32872899)
chr7 (102-142)||(36267554-36267594)
chr7 (106-141)||(16833684-16833719)
chr7 (2-96)||(23116308-23116403)
chr7 (262-312)||(25875200-25875251)
chr7 (62-142)||(28074104-28074186)
chr7 (77-140)||(43230239-43230304)
chr7 (56-138)||(33519053-33519137)
chr7 (76-142)||(36267728-36267796)
chr7 (77-142)||(4835480-4835547)
chr7 (102-142)||(25887193-25887233)
chr7 (4-40)||(26365871-26365907)
chr7 (92-140)||(31364237-31364285)
chr7 (77-142)||(31571646-31571713)
chr7 (2-94)||(42087096-42087188)
[»] chr3 (39 HSPs)
chr3 (2-141)||(41110323-41110464)
chr3 (5-142)||(24560321-24560460)
chr3 (1-141)||(16275707-16275849)
chr3 (6-142)||(41039951-41040089)
chr3 (2-142)||(9312477-9312614)
chr3 (5-137)||(27541937-27542071)
chr3 (2-142)||(36568905-36569046)
chr3 (1-94)||(220448-220541)
chr3 (1-147)||(37102155-37102292)
chr3 (2-102)||(21773883-21773983)
chr3 (2-142)||(18654601-18654743)
chr3 (2-96)||(37807181-37807275)
chr3 (5-141)||(52474019-52474157)
chr3 (1-142)||(30200099-30200235)
chr3 (29-139)||(10748299-10748406)
chr3 (40-140)||(28581189-28581291)
chr3 (78-142)||(24253722-24253789)
chr3 (62-142)||(34641151-34641233)
chr3 (9-56)||(52185124-52185171)
chr3 (2-88)||(2387817-2387903)
chr3 (2-122)||(25654991-25655115)
chr3 (2-141)||(13082856-13083005)
chr3 (3-101)||(46556245-46556345)
chr3 (5-94)||(55327474-55327563)
chr3 (49-142)||(24253870-24253965)
chr3 (77-137)||(10943790-10943852)
chr3 (7-70)||(43005814-43005877)
chr3 (2-96)||(40463920-40464014)
chr3 (2-53)||(14898077-14898128)
chr3 (1-44)||(28582610-28582653)
chr3 (105-139)||(27197687-27197721)
chr3 (63-141)||(26135959-26136039)
chr3 (3-136)||(51819146-51819267)
chr3 (77-142)||(220573-220640)
chr3 (77-142)||(25655148-25655215)
chr3 (77-142)||(28582685-28582752)
chr3 (103-139)||(31664391-31664427)
chr3 (103-139)||(31931969-31932005)
chr3 (77-142)||(41110497-41110564)
[»] chr8 (41 HSPs)
chr8 (1-139)||(30479721-30479861)
chr8 (2-142)||(31543073-31543215)
chr8 (2-137)||(36308944-36309081)
chr8 (1-140)||(16653049-16653190)
chr8 (2-135)||(11575415-11575549)
chr8 (8-142)||(11785633-11785769)
chr8 (5-142)||(9718490-9718619)
chr8 (18-147)||(34634260-34634391)
chr8 (1-128)||(1281243-1281372)
chr8 (2-142)||(31738524-31738666)
chr8 (2-95)||(7503004-7503097)
chr8 (2-142)||(24243051-24243190)
chr8 (2-102)||(1026892-1026992)
chr8 (2-94)||(6315163-6315255)
chr8 (2-94)||(30664462-30664554)
chr8 (2-142)||(37032480-37032623)
chr8 (2-93)||(28083843-28083934)
chr8 (2-101)||(29358384-29358482)
chr8 (62-142)||(43732848-43732930)
chr8 (2-142)||(41103505-41103649)
chr8 (1-102)||(2248552-2248653)
chr8 (9-96)||(7979248-7979335)
chr8 (2-142)||(40990182-40990327)
chr8 (43-142)||(3726864-3726965)
chr8 (2-96)||(29690971-29691065)
chr8 (2-96)||(37923127-37923221)
chr8 (77-142)||(8815317-8815384)
chr8 (4-140)||(11033520-11033659)
chr8 (7-59)||(33922626-33922678)
chr8 (2-70)||(42650408-42650479)
chr8 (62-142)||(30365291-30365373)
chr8 (80-142)||(11033420-11033482)
chr8 (77-139)||(7394637-7394701)
chr8 (62-142)||(34196470-34196550)
chr8 (77-142)||(1027024-1027091)
chr8 (2-101)||(4247562-4247660)
chr8 (78-142)||(31543249-31543315)
chr8 (51-142)||(12022293-12022386)
chr8 (62-140)||(16024315-16024394)
chr8 (77-142)||(30365131-30365198)
chr8 (52-96)||(38198199-38198243)
[»] chr5 (48 HSPs)
chr5 (5-142)||(37606998-37607137)
chr5 (5-142)||(37779207-37779346)
chr5 (1-141)||(7544236-7544378)
chr5 (4-142)||(37551510-37551648)
chr5 (4-142)||(37654340-37654478)
chr5 (4-142)||(13634814-13634954)
chr5 (1-138)||(36363132-36363271)
chr5 (2-141)||(26414994-26415136)
chr5 (2-101)||(36392194-36392293)
chr5 (2-142)||(8502836-8502978)
chr5 (2-142)||(16938580-16938722)
chr5 (2-96)||(28279525-28279619)
chr5 (1-93)||(9856980-9857072)
chr5 (5-140)||(9798615-9798752)
chr5 (43-141)||(1657955-1658055)
chr5 (29-142)||(14245089-14245204)
chr5 (2-94)||(20146917-20147009)
chr5 (2-96)||(20513494-20513592)
chr5 (8-96)||(17024273-17024361)
chr5 (2-142)||(10476129-10476271)
chr5 (1-94)||(16501841-16501934)
chr5 (2-147)||(10072653-10072790)
chr5 (2-96)||(4373615-4373709)
chr5 (4-102)||(2550395-2550493)
chr5 (72-140)||(11757074-11757144)
chr5 (7-102)||(29002249-29002344)
chr5 (17-142)||(22023483-22023602)
chr5 (61-142)||(14245206-14245289)
chr5 (77-147)||(20147051-20147118)
chr5 (35-148)||(11419187-11419302)
chr5 (9-96)||(13839777-13839864)
chr5 (77-141)||(34980812-34980878)
chr5 (80-142)||(13634712-13634776)
chr5 (63-142)||(40305671-40305747)
chr5 (77-142)||(26414894-26414961)
chr5 (51-142)||(10204577-10204670)
chr5 (61-141)||(10650429-10650513)
chr5 (31-142)||(10650544-10650657)
chr5 (51-142)||(15986774-15986867)
chr5 (102-140)||(21581150-21581188)
chr5 (113-142)||(2184028-2184057)
chr5 (4-89)||(32727833-32727918)
chr5 (29-96)||(43535-43603)
chr5 (82-139)||(2550533-2550592)
chr5 (101-141)||(16501994-16502034)
chr5 (102-142)||(16938480-16938520)
chr5 (102-142)||(34981013-34981053)
chr5 (2-38)||(40815397-40815433)
[»] scaffold0262 (1 HSPs)
scaffold0262 (2-142)||(16297-16439)
[»] scaffold0067 (2 HSPs)
scaffold0067 (12-142)||(39187-39320)
scaffold0067 (77-147)||(39366-39438)
[»] scaffold0294 (1 HSPs)
scaffold0294 (2-141)||(15364-15504)
[»] scaffold0171 (1 HSPs)
scaffold0171 (4-94)||(16053-16143)
[»] scaffold0240 (1 HSPs)
scaffold0240 (76-142)||(17715-17781)
[»] scaffold0198 (1 HSPs)
scaffold0198 (61-140)||(3150-3231)
[»] scaffold0026 (1 HSPs)
scaffold0026 (19-101)||(1290-1372)
[»] scaffold0096 (2 HSPs)
scaffold0096 (3-96)||(6686-6778)
scaffold0096 (73-142)||(6585-6656)
[»] scaffold0007 (1 HSPs)
scaffold0007 (51-139)||(242366-242456)
[»] scaffold0012 (1 HSPs)
scaffold0012 (78-139)||(184784-184847)


Alignment Details
Target: chr6 (Bit Score: 304; Significance: 1e-171; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 353
Target Start/End: Complemental strand, 30487449 - 30487096
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  30487449 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtcc-taatttaacaatgaaaagtgaac 30487351  T
Q  101 cc--ccctccctttccctcttaaaccctccatccaaacacacccataattgtcaattcccacttgaggccgagtaatgtcttcgtgggtcgaccgtccca 198  Q
    ||  ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30487350 cctcccctcccttcccctcctaaaccctccatccaaacacacccttaattgtcaattcccgcttgaggccgagtaatgtcttcgtgggtcgaccgtccca 30487251  T
Q  199 tatagtgactgatgtaattaagtcggccacctccacctcggtggtgcgtatcgtatacccttgcatggtatcacgagctcccgattttggggtcttgctt 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30487250 tatagtgactgatgtaattaagtcggccacctccacctcggtggtgcgtatcgtatacccttgcatggtatcacgagctcccgattttggggtcttgctt 30487151  T
Q  299 ccgcgtaaatcctaatagtcgtaatcacggtttcctctatttctatccacctttg 353  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  30487150 ccgcgtaaatcctaatagtcgtaatcacggtttcctctgtttctatccaactttg 30487096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31849210 - 31849311
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  31849210 caagtgtgattgaagtattatattattgtttatcacgttaatatgttaattttttaaaagacattttatagtgtccgtaatttaaaaatgaaaagtgaac 31849309  T
Q  101 cc 102  Q
    ||    
T  31849310 cc 31849311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 9721280 - 9721134
Alignment:
Q  3 agtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc- 101  Q
    ||||||||||||||||||||| |||||||||||  |||||||||| ||||||||||| ||||| |||| |||| |||||||||||||||||| | ||||     
T  9721280 agtgtgattgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaaccc 9721181  T
Q  102 -cccctccctttccctcttaaaccctccatccaaacacacccataat 147  Q
     |||||||||| ||||| |||||| || |||||||||||||| ||||    
T  9721180 tcccctcccttcccctcctaaaccttcaatccaaacacacccttaat 9721134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 9719173 - 9719034
Alignment:
Q  3 agtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa--c 100  Q
    ||||||||||||||||||||| |||||||||||  |||||||||| ||||||||||| ||||| |||| |||| |||||||||||||||||| | ||  |    
T  9719173 agtgtgattgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaatcc 9719074  T
Q  101 ccccctccctttccctcttaaaccctccatccaaacacac 140  Q
     |||||||||| ||||| ||||||||| ||||||||||||    
T  9719073 tcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 149
Target Start/End: Original strand, 1300721 - 1300870
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| || | |||||||| |||| |||||||||||||||||||| ||||    
T  1300721 aagtgtgattgaagtattatatgattgtttatcaggttaatatgttaactttttataaaatatttcatattgtccgtaatttaaaaatgaaaagtaaacc 1300820  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacacccataattg 149  Q
      ||||||| ||   ||   ||||||||||||||||||||||| ||||||    
T  1300821 ctcccctccattcatcttccaaaccctccatccaaacacacccttaattg 1300870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 10818320 - 10818460
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--c 102  Q
    ||||||||||||||||||| ||  ||||||||||||||||||| |  |||||||| |||||||||| |||| |||||||||||||||||||| ||||  |    
T  10818320 tgtgattgaagtattatatgatcatttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctc 10818419  T
Q  103 ccctccctttccctcttaaaccctccatccaaacacaccca 143  Q
    ||||||||  ||||| ||||| ||| |||||||||||||||    
T  10818420 ccctccctacccctcctaaactctcaatccaaacacaccca 10818460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 4097655 - 4097561
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    |||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||| | |||| ||||||||||||| ||||||    
T  4097655 aagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcaaagtgtccgtaatttaaaaattaaaagt 4097561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 10348942 - 10348808
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    |||||| ||||||||||||||||||| ||||||| | |||||||||| ||||||||||||| |||||||| | || |||||||||||||| ||||||||     
T  10348942 caagtgcgattgaagtattatattatcgtttatcgtattaatatgttaactttttaaaagatatttcatattatccgtaatttaaaaatg-aaagtgaat 10348844  T
Q  101 c--cccctccctttccctcttaaaccctccatccaaa 135  Q
    |  |||||||| ||||||| |||||||||||| ||||    
T  10348843 catcccctccc-ttccctcataaaccctccattcaaa 10348808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 1390447 - 1390561
Alignment:
Q  29 tttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa--cccccctccctttccctcttaaaccct 126  Q
    ||||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||||||||||||| ||  ||| ||||| || ||||| ||||||||    
T  1390447 tttatcatgttaatatgttaactttttaaaaaatatttcatagtgtcagtaatttaaaaatgaaaagtaaaacccctcctccattcccctcctaaaccct 1390546  T
Q  127 ccatccaaacacacc 141  Q
     ||||||||||||||    
T  1390547 tcatccaaacacacc 1390561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 21606987 - 21606855
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||| ||||||||||||  || |||||||||||||||||||| |||||||| || |||||||||| | || |||||||||||||||||||| ||||    
T  21606987 aagtgtgactgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtttccgtaatttaaaaatgaaaagtaaacc 21606888  T
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |        | ||||| ||||||||||||||||||||||||    
T  21606887 c--------tcccctcctaaaccctccatccaaacacaccc 21606855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 33236057 - 33236193
Alignment:
Q  7 tgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtga--accccc 104  Q
    ||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| | |||||||| |||| |||||||||||||||||||| |   | |||    
T  33236057 tgattgaagaattatatgattgtttatcatgttaatatgttaactttttaaaa-aaatttcatagtgtccgtaatttaaaaatgaaaagtaatctctccc 33236155  T
Q  105 ctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||| || | ||| ||||| ||||||||||| ||||||    
T  33236156 ctcctttcctctcataaactctccatccaaatacaccc 33236193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 2900017 - 2900110
Alignment:
Q  8 gattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||| ||||||||| ||||||||||||||||||||||| |||| ||| || |||||||||| ||||| ||||||||||||||||||| ||||    
T  2900017 gattgatgtattatatgattgtttatcatgttaatatgttaacttcttataaaacatttcatagtgtctataatttaaaaatgaaaagtaaacc 2900110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 34176435 - 34176576
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    |||||||||||| |||||||||  || |||||| ||||||||||||| |||||  |||| | |||||||| |||| |||||||||||||||||| | |||    
T  34176435 caagtgtgattgcagtattatacgatcgtttattatgttaatatgttaactttaaaaaaaatatttcatagtgtccgtaatttaaaaatgaaaactaaac 34176534  T
Q  101 ccccctccct-ttccctcttaaaccctccatccaaacacacc 141  Q
     | | || || ||||||| |||||||||||||||||||||||    
T  34176535 tctcatctctcttccctcataaaccctccatccaaacacacc 34176576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 665984 - 665842
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgtt-gactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    ||||||| |||||||||||||| ||  |||||||||||||||||||  | |||||||||||||||||||| | |   ||||||||||||||||| |||||    
T  665984 aagtgtggttgaagtattatatcatcatttatcatgttaatatgttaaaatttttaaaagacatttcataatattcataatttaaaaatgaaaaatgaac 665885  T
Q  101 c--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |  |||||| ||| ||||| |||||||| |||||||||||||||    
T  665884 cctcccctcacttcccctcctaaaccct-catccaaacacaccc 665842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 5585445 - 5585304
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatg-aaaagtgaac 100  Q
    ||||||||||||| |||| ||| || |||||| |||||||||||||  |||||||||| |||||||||| |||  |||||||||||| | |||||| |||    
T  5585445 aagtgtgattgaaatattgtataatcgtttattatgttaatatgttacctttttaaaaaacatttcatagtgttcgtaatttaaaaaagaaaaagtaaac 5585346  T
Q  101 cc--ccctccctttccctcttaaaccctccatccaaacacac 140  Q
     |  || | |||| ||||| ||||||||||||||||||||||    
T  5585345 tcttccattccttcccctcctaaaccctccatccaaacacac 5585304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 14515572 - 14515714
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||| ||||||||||||||||  ||||||||||| ||||||| ||| || |||| | |||| ||| |||   ||||||||||||||||  | ||||    
T  14515572 aagtgtgaatgaagtattatattatcatttatcatgttcatatgttaactcttcaaaaaatattttatagtgttcataatttaaaaatgaaatctaaacc 14515671  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      ||| | |||| ||||| ||||||||||||||||||||||||    
T  14515672 ctccctttccttcccctcctaaaccctccatccaaacacaccc 14515714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 19278176 - 19278039
Alignment:
Q  7 tgattgaagtattatattattgtttatcatgttaatat----gttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa--c 100  Q
    |||||||||||| |||| || |||||||||||||||||    ||  ||||||||||| | |||| ||| |||| |||||||||||||||||||| ||  |    
T  19278176 tgattgaagtatcatatgatcgtttatcatgttaatatatatgtcaactttttaaaaaatattttatagtgtcagtaatttaaaaatgaaaagtaaactc 19278077  T
Q  101 ccccctccctttccctcttaaaccctccatccaaacac 138  Q
     | ||| |||| ||||| ||||||||||||||||||||    
T  19278076 tctccttccttcccctcctaaaccctccatccaaacac 19278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 16738139 - 16737996
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||| ||| ||||||||||| || || |||||||||| ||| || | || | |||| |||||||||| | ||  ||||||||||| ||||||| || |    
T  16738139 aagtgttatttaagtattatatgatcgtatatcatgttattattttaatttatcaaaaaacatttcatagtttccataatttaaaaacgaaaagtaaatc 16738040  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccca 143  Q
      |||||| ||| | |||||||||||||||||||||||||||||    
T  16738039 ttcccctctcttcctctcttaaaccctccatccaaacacaccca 16737996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 4097684 - 4097754
Alignment:
Q  72 tgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacac 140  Q
    |||| |||||||||||| |||||||||||||  ||||||||| ||||||||||||||| ||||||||||||    
T  4097684 tgtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 33041590 - 33041655
Alignment:
Q  29 tttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    ||||||||||||||||||| ||||||||||| |||||||||| | || ||||||||||||| ||||    
T  33041590 tttatcatgttaatatgttaactttttaaaaaacatttcatagtatccgtaatttaaaaataaaaa 33041655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 142
Target Start/End: Original strand, 9298625 - 9298734
Alignment:
Q  41 atatgttgactttttaaaaga-catttcatactgtctgtaatttaaaaatgaaaagtgaacc-------cccctccctttccctcttaaaccctccatcc 132  Q
    ||||||| ||||||||||| | ||||||||| |||| ||||||||||| |||||||| ||||       |||||||||| ||||| ||| |||| |||||    
T  9298625 atatgttaactttttaaaaaaacatttcataatgtccgtaatttaaaattgaaaagtaaaccctcccctcccctcccttcccctcctaaccccttcatcc 9298724  T
Q  133 aaacacaccc 142  Q
    ||||||||||    
T  9298725 aaacacaccc 9298734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 13583820 - 13583895
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctg 77  Q
    ||||||||||||| |||||||| ||  ||||| ||||||| ||||| | ||||||||| |||||||||| ||||||    
T  13583820 aagtgtgattgaaatattatatgatcatttattatgttaacatgttaattttttaaaaaacatttcatagtgtctg 13583895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 9051710 - 9051775
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaacc-cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||||| |||||||| |  |||||||||| ||||||||||||||| ||||||||||||||    
T  9051710 gtaatttaaaaat-aaaagtgagcatcccctcccttcccctcttaaaccctcaatccaaacacaccc 9051775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 26318482 - 26318546
Alignment:
Q  78 taatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacac 140  Q
    ||||||||||| ||||||| || |  |||||||||||||||| ||||| ||||||||||||||||    
T  26318482 taatttaaaaaagaaaagtaaatcttcccctccctttccctcctaaactctccatccaaacacac 26318546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 148
Target Start/End: Original strand, 4097504 - 4097539
Alignment:
Q  113 ccctcttaaaccctccatccaaacacacccataatt 148  Q
    |||||||||||||||||||||||||||||| |||||    
T  4097504 ccctcttaaaccctccatccaaacacacccttaatt 4097539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 142
Target Start/End: Original strand, 31799131 - 31799170
Alignment:
Q  103 ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  31799131 ccctccctttccctcttaaactcttcatccaaacacaccc 31799170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 1395737 - 1395831
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    ||||||||||||| || || || ||  ||||||||| ||||||||| | ||||||||| |||||  | | |||  ||||||||||||||||||||    
T  1395737 aagtgtgattgaaataatacatgatcatttatcatgctaatatgttaattttttaaaaaacattctacagtgttagtaatttaaaaatgaaaagt 1395831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 2892745 - 2892664
Alignment:
Q  3 agtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaa 85  Q
    |||||||||||| |||||||| |||||||||||||||| ||| || | ||||||||| | || ||||| |||  |||||||||    
T  2892745 agtgtgattgaaatattatatgattgtttatcatgttattat-tttaatttttaaaaaatatctcatagtgtgcgtaatttaa 2892664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 2892985 - 2892900
Alignment:
Q  3 agtgtgattgaagtattatattattgtttatcatgttaatatgttgacttt-ttaaaagacatttcatactgtctgtaatttaaaaa 88  Q
    ||||||||||||||||||||| || ||||||||||||| ||| || ||||| ||| || | |||||||| |||  ||||||||||||    
T  2892985 agtgtgattgaagtattatatgatcgtttatcatgttattat-tttactttcttacaaaatatttcatagtgtgcgtaatttaaaaa 2892900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 31849182 - 31849113
Alignment:
Q  73 gtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacac 140  Q
    ||||||| |||||||| ||||| | |||||  ||||||||| ||||||||||||||| |||| |||||||    
T  31849182 gtctgtagtttaaaaaagaaaactaaaccctcccctcccttcccctcttaaaccctcaatcctaacacac 31849113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 10818302 - 10818230
Alignment:
Q  72 tgtctgtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||| |||||||||||| ||||| | |||   |||||||||| ||||| ||||||||| ||||||||||||||    
T  10818302 tgtccgtaatttaaaaaagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacacaccc 10818230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 12811067 - 12811034
Alignment:
Q  61 acatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    |||||||||| |||||||||||||||||||||||    
T  12811067 acatttcatagtgtctgtaatttaaaaatgaaaa 12811034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 14515514 - 14515474
Alignment:
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||| ||||| ||||||||| ||||||||||||||    
T  14515514 cccctcccttcccctcctaaaccctcaatccaaacacaccc 14515474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 23748195 - 23748338
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  23748195 caagtgtgattgaagtattatattatcgtttatcatgttaatatgttaactttttaaaagacatttcatagtgtccgtagtttaaaaatgaaaagtgaac 23748294  T
Q  101 c--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |  |||||||||| ||||| ||||||||||||||||||||||||    
T  23748295 cctcccctcccttcccctcctaaaccctccatccaaacacaccc 23748338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 9631660 - 9631803
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||  |||| |||||||||||| ||||||| |||    
T  9631660 caagtgtgaatgaagtattatattatcgtttatcatgttaatatgttaactttttaaaggacatttcatggtgtccgtaatttaaaaacgaaaagttaac 9631759  T
Q  101 cccc--ctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    || |  ||||||||||||| ||||||||||||||||||||||||    
T  9631760 cctcttctccctttccctcctaaaccctccatccaaacacaccc 9631803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 40022471 - 40022615
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgtta--atatgttgactttttaaaaga-catttcatactgtctgtaatttaaaaatgaaaagtga 98  Q
    |||||||||||||||||||||| |||||||| ||| |||  ||||||| ||||||||||| | ||||||||| |||||||||||||||||||||| || |    
T  40022471 aagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttaaaaaaacatttcatagtgtctgtaatttaaaaatgaaatgtaa 40022570  T
Q  99 acc--cccctccctttccctcttaaaccctccatccaaacacacc 141  Q
    |||  ||||||||||  ||||||||||||||||||||| ||||||    
T  40022571 accctcccctcccttctcctcttaaaccctccatccaagcacacc 40022615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 34209565 - 34209707
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| | |||||||| ||| ||||||||||||||||||||| | |     
T  34209565 aagtgtgattgaagtgttatatgattgtttatcatgttaatatgttaactttttaaaaaatatttcatagtgtttgtaatttaaaaatgaaaagtaatct 34209664  T
Q  102 c--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |  ||||||| | || |  |||||||| |||||||||||||||    
T  34209665 cttccctcccctcccattctaaacccttcatccaaacacaccc 34209707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 36347684 - 36347542
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | || ||||| | || ||||| ||||||||||||||||||     
T  36347684 aagtgtgattgaagtattatataattgtttatcatgttaatatgttaactatttaaaaaatatgtcatagtatccgtaatataaaaatgaaaagtgaact 36347585  T
Q  102 cccc--tccctttccctcttaaaccctccatccaaacacaccc 142  Q
    | |   |||||| ||||| |||||||| |||||||||||||||    
T  36347584 ctctcttcccttcccctcctaaacccttcatccaaacacaccc 36347542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 42316907 - 42316804
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| || |||||||||||||||| ||| ||||||||||| |||||||||| ||| || |||||||||||||||||| |||     
T  42316907 aagtgtgattgaagtattatatgatcgtttatcatgttaatacgttaactttttaaaaaacatttcatagtgtttgcaatttaaaaatgaaaagtaaact 42316808  T
Q  102 cccc 105  Q
    ||||    
T  42316807 cccc 42316804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 15224837 - 15224743
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||  |||||||||| |||||||||| |||| ||||||||||||||||||||    
T  15224837 aagtgtgattgaagtattatatgatcatttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 15224743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 39732872 - 39732772
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||| ||||||||||||||||| || |||||||||||||||||||| |||||||| || |||||||||| |||  |||||||||||||||||||| ||||    
T  39732872 aagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaacc 39732773  T
Q  102 c 102  Q
    |    
T  39732772 c 39732772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 36046343 - 36046204
Alignment:
Q  6 gtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa--cccc 103  Q
    |||||||||||||||| | ||  |||| |||||||||||||| ||||||||||| ||||||  || |||| |||||||||||||||||| | ||  | ||    
T  36046343 gtgattgaagtattatgtgatcatttaacatgttaatatgttaactttttaaaaaacattttctagtgtccgtaatttaaaaatgaaaaataaactctcc 36046244  T
Q  104 cctccctttccctcttaaaccctccatccaaacacaccca 143  Q
    ||||  || ||||| |||||||||||||||||||||||||    
T  36046243 cctcatttcccctcctaaaccctccatccaaacacaccca 36046204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 17379913 - 17379994
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaattt 83  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||| |||| |||||||    
T  17379913 aagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaattt 17379994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 19566964 - 19566821
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgacttttt-aaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    |||||||||||||||||||||  |  ||||||||| |||||||| | ||||||| |||| |||||||||| |||||||||||||||| ||| |||| |||    
T  19566964 aagtgtgattgaagtattatacgaccgtttatcattttaatatgctaactttttaaaaaaacatttcatagtgtctgtaatttaaaactgagaagtaaac 19566865  T
Q  101 ccccc--tccctttccctcttaaaccctccatccaaacacaccc 142  Q
    || ||  || ||||||||  ||||| |||| |||||||||||||    
T  19566864 cctccattctctttcccttctaaacactccgtccaaacacaccc 19566821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 16565878 - 16565972
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    |||||||||||||||||||||| || ||||||||| || ||||||| ||||||||||| || ||||||| | || ||||||||||||| ||||||    
T  16565878 aagtgtgattgaagtattatatgatcgtttatcatatttatatgttaactttttaaaaaacgtttcatagtatccgtaatttaaaaataaaaagt 16565972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 31795912 - 31795772
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt--gaa 99  Q
    |||||||||||||||||||||| || ||||||||||||  ||| ||   |||| |||| || ||||||| |||| |||||||||||| |||||||  |      
T  31795912 aagtgtgattgaagtattatatgatcgtttatcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacgaaaagtaagtc 31795813  T
Q  100 cccccctccctttccctcttaaaccctccatccaaacacac 140  Q
    | ||||||||||  |||| ||||||||||||||||||||||    
T  31795812 ctcccctcccttcacctcataaaccctccatccaaacacac 31795772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 36566991 - 36566899
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgacttttta-aaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    ||||||||||||||||||| ||  ||||||||||||||||||| |||||||| ||| |  ||||||| |||| ||||||||||||||||||||    
T  36566991 tgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttataaaaaactttcataatgtccgtaatttaaaaatgaaaagt 36566899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 35736297 - 35736430
Alignment:
Q  7 tgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaaccc--cc 104  Q
    |||| |||||||||||| || ||||||||||||| | | ||    |||||||| || ||||||| |||| | |||||||||| ||||||||| |||  ||    
T  35736297 tgatcgaagtattatatgatcgtttatcatgttattttatt----ttttaaaaaacttttcatagtgtccgaaatttaaaaacgaaaagtgagccctccc 35736392  T
Q  105 ctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||  |||| ||||||||||||||||||||||||    
T  35736393 ctcccttcacctcctaaaccctccatccaaacacaccc 35736430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 12541867 - 12541999
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa-c 100  Q
    ||||| |||||||||| ||||| || ||||||||||||||| |||| ||||||||||| |||||| ||| | ||||||||||    ||||||||| || |    
T  12541867 aagtgcgattgaagtactatatgatcgtttatcatgttaatgtgttaactttttaaaaaacattttatagtatctgtaattt----atgaaaagtaaatc 12541962  T
Q  101 ccccctccctttccctcttaaaccctccatccaaaca 137  Q
      |||||||||   ||| |||||||||||||||||||    
T  12541963 taccctcccttcttctcctaaaccctccatccaaaca 12541999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 1583225 - 1583278
Alignment:
Q  49 actttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaaccc 102  Q
    ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||    
T  1583225 actttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccc 1583278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 2241511 - 2241556
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgtt 47  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||    
T  2241511 aagtgtaattgaagtattatatgattgtttatcatgttaatatgtt 2241556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 141
Target Start/End: Complemental strand, 8426981 - 8426881
Alignment:
Q  43 atgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacac 140  Q
    ||||| ||||||||||| |||||||||| ||||  |||||||||||| |||||| ||||  ||| |||||| ||||| ||||| |||||| |||| ||||    
T  8426981 atgttaactttttaaaaaacatttcatagtgtccttaatttaaaaattaaaagtaaaccctcccttcccttcccctcctaaactctccattcaaatacac 8426882  T
Q  141 c 141  Q
    |    
T  8426881 c 8426881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 9427090 - 9427179
Alignment:
Q  6 gtgattgaagtattatattattgtttatcatgttaatatgttgacttt-ttaaaagacatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    ||||||||||||||||||  |||||||||||| ||||||| | |||||   |||| |||||| ||| |||| ||||||||||||||||||    
T  9427090 gtgattgaagtattatatgtttgtttatcatgctaatatgctaactttaaaaaaaaacattttatagtgtccgtaatttaaaaatgaaaa 9427179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 37740034 - 37739981
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgacttttt 55  Q
    |||||||||||||||||||||| || ||||||||||||||||| || |||||||    
T  37740034 aagtgtgattgaagtattatatgatcgtttatcatgttaatatcttaacttttt 37739981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 8427043 - 8427110
Alignment:
Q  73 gtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacac 138  Q
    ||||||| |||||||||||||||| ||| |  ||||||||||||||| ||||||||| ||||||||||    
T  8427043 gtctgtactttaaaaatgaaaagtaaactctcccctccctttccctcctaaaccctcaatccaaacac 8427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 7681386 - 7681485
Alignment:
Q  43 atgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||| |||||| |||| | |||||||| | || | ||||||||||| |||||| ||||| || ||||| ||| ||||||||||| ||||||||| ||||    
T  7681386 atgttaacttttaaaaaaatatttcataatatccgcaatttaaaaataaaaagtaaaccctccccccttccccgcttaaaccctcgatccaaacaaaccc 7681485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 39821770 - 39821902
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    ||||| |||| ||||||||||  ||  ||||||||||||||||||| ||| ||||||    |||||||| |||| |||||||||||| ||||| | ||||    
T  39821770 aagtgcgatttaagtattataagatcatttatcatgttaatatgttaactctttaaatattatttcatagtgtccgtaatttaaaaaagaaaactaaacc 39821869  T
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |        | ||||| ||||||||||||||||||||||||    
T  39821870 c--------tcccctcctaaaccctccatccaaacacaccc 39821902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 27926668 - 27926746
Alignment:
Q  16 tattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    |||||||| || |||||||||||||||||||| |||||||||   | |||| ||| | || ||||||||||||||||||    
T  27926668 tattatatgatcgtttatcatgttaatatgttaactttttaaccaaaatttaatagtatccgtaatttaaaaatgaaaa 27926746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 22356175 - 22356247
Alignment:
Q  72 tgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||| |||||||||||| ||||| |||||||  ||||||||| ||||| |||| |||| ||||||||||||||    
T  22356175 tgtccgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctcaatccaaacacaccc 22356247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 36046378 - 36046443
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaacc-cccctccctttccctcttaaaccctccatccaaacacacc 141  Q
    ||||||||||||  |||||| |||| |||||||||| ||||| ||||||||| |||||||||||||    
T  36046378 gtaatttaaaaaacaaaagtaaacctcccctcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 15224870 - 15224937
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| ||||||| ||||  |||||||||| ||||| ||||||||  ||||||||||||||    
T  15224870 gtaatttaaaaaagaaaagtaaaccatcccctcccttcccctcctaaacccttgatccaaacacaccc 15224937  T

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Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 28262583 - 28262500
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaa 88  Q
    |||||||||| ||||| || || ||||||||||||| ||| || ||||||||||| | |||||||| |||   |||||||||||    
T  28262583 tgtgattgaaatattacatgatcgtttatcatgttattatattaactttttaaaaaatatttcatagtgttcataatttaaaaa 28262500  T

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Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 39821736 - 39821686
Alignment:
Q  78 taatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccct 126  Q
    ||||||||||||||||||| |||||  |||||| |||||||||||||||||    
T  39821736 taatttaaaaatgaaaagtaaaccctcccctccatttccctcttaaaccct 39821686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 17380007 - 17380084
Alignment:
Q  67 catactgtctgtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||| |||| ||||||||||||||||||   ||||  |||||| ||| ||||| ||||||||| ||||||||||||||    
T  17380007 catagtgtccgtaatttaaaaatgaaaatcaaaccatcccctcacttcccctcctaaaccctcaatccaaacacaccc 17380084  T

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Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 18811429 - 18811467
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgtta 40  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  18811429 aagtgtgattgaaatattatatgattgtttatcatgtta 18811467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 41778867 - 41778774
Alignment:
Q  51 tttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||| |||| |||||| ||||||||  |||||||||    |||||| |||||  ||||||||||||||  ||||||||| ||||||||||||||    
T  41778867 ttttaaaaaaacattttatactgtccataatttaaagtacaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacaccc 41778774  T

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Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 12751916 - 12752009
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaag 95  Q
    |||||||||||||||||||||| || |||||| || ||| ||| || | |||| |||| | |||||||| ||||  |||||| |||| ||||||    
T  12751916 aagtgtgattgaagtattatatgatcgtttattatattattatattaatttttaaaaaaatatttcatagtgtccataattttaaaacgaaaag 12752009  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 3094528 - 3094595
Alignment:
Q  76 tgtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacacc 141  Q
    |||||||||||||  ||||||||  |  ||||||||||||| || ||||||||| |||||||||||||    
T  3094528 tgtaatttaaaaaataaaagtgagtcttcccctccctttccttcctaaaccctcaatccaaacacacc 3094595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6721766 - 6721726
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaa 41  Q
    |||||||||||||| |||||||||||  |||||||||||||    
T  6721766 caagtgtgattgaaatattatattatcatttatcatgttaa 6721726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 17379887 - 17379847
Alignment:
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||| ||||| ||||||||| ||||||||||||||    
T  17379887 cccctcccttcccctcctaaaccctcaatccaaacacaccc 17379847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 34187643 - 34187576
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||||| |||||||||||  ||||| |||| | ||| ||||| ||| ||||||||||||||    
T  34187643 gtaatttaaaaattaaaagtgaaccttccccttccttccactcctaaactctcaatccaaacacaccc 34187576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 35736216 - 35736176
Alignment:
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||| ||||| ||||||||| ||||||||||||||    
T  35736216 cccctcccttcccctcctaaaccctcaatccaaacacaccc 35736176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 36347717 - 36347784
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaacccccc--tccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| ||||||| ||| | ||  |||||| ||||| ||||||||| ||||||||||||||    
T  36347717 gtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacacaccc 36347784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 42296479 - 42296546
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccccc--ctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||||  |||||||||||| |  ||||||| ||||| ||| ||||| ||||||||||||||    
T  42296479 gtaatttaaaaaataaaagtgaaccctctcctcccttcccctcctaatccctcaatccaaacacaccc 42296546  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 45257483 - 45257550
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| ||||||| ||||  | |||||||| || || |||| |||||||||||||||||||    
T  45257483 gtaatttaaaaaagaaaagtaaaccatctcctcccttcccatcctaaaacctccatccaaacacaccc 45257550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 8e-43; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 49735612 - 49735469
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  49735612 caagtgtgatagaaatattatattatcgtttatcatgttaataggttaactttttaaaagacatttcatgttgtccgtaatttaaaaatgaaaagtgaac 49735513  T
Q  101 c--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |  |||||||||| ||||| ||||||||| ||||||||||||||    
T  49735512 cctcccctcccttcccctcctaaaccctcaatccaaacacaccc 49735469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 45741994 - 45742133
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa--ccc 102  Q
    ||||||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||| ||  | |    
T  45741994 tgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaactctc 45742093  T
Q  103 ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||||| | |||||||| |||||||||||||||    
T  45742094 ccctccctttcccgcctaaacccttcatccaaacacaccc 45742133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 54935169 - 54935312
Alignment:
Q  2 aagtgtgattgaagtatt-atattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    |||||||||||||||||| |||| || ||||||||| |||||||| | ||||||||||| |||||||||| |||| |||||||||||||||||| | |||    
T  54935169 aagtgtgattgaagtatttatatgatcgtttatcatattaatatgataactttttaaaatacatttcatagtgtccgtaatttaaaaatgaaaaataaac 54935268  T
Q  101 c--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |  |||||||||| ||||| ||||||||||||||||||||||||    
T  54935269 cctcccctcccttcccctcctaaaccctccatccaaacacaccc 54935312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 27735846 - 27735987
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| ||  ||||||||||||||||| | ||| ||||||| |||||| ||| |||| |||||||||||||||||| ||||||    
T  27735846 aagtgtgattgaagtattatatgatcatttatcatgttaatatgctaactctttaaaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaacc 27735945  T
Q  102 c--ccctccctttccctcttaaaccctccatccaaacacacc 141  Q
    |   |||||||| ||||| |||||||||||||||||||||||    
T  27735946 ctatcctcccttcccctcctaaaccctccatccaaacacacc 27735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 31348462 - 31348317
Alignment:
Q  4 gtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaaccc- 102  Q
    ||||||||||| |||||||| |||||||||||||||||||||||  |||||||||| |||||||||| |||| |||||||||||||||||||| |||||     
T  31348462 gtgtgattgaattattatatgattgtttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccct 31348363  T
Q  103 -ccctccctttccctc-----ttaaaccctccatccaaacacaccc 142  Q
     ||||||||| |||||      ||||||||||||||||||||||||    
T  31348362 tccctcccttcccctcataaactaaaccctccatccaaacacaccc 31348317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 54320535 - 54320677
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||| || ||||||| |||| ||||||||||||| ||||   ||||    
T  54320535 aagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacgtttcatagtgtccgtaatttaaaaattaaaatcaaacc 54320634  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      |||||||||| ||||| ||||||||| ||||||||||||||    
T  54320635 ctcccctcccttcccctcctaaaccctcaatccaaacacaccc 54320677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 41174449 - 41174588
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--c 102  Q
    ||||||||| ||||||||| ||  ||||| ||||||||||| | |||||||||||  ||||||||| ||||  ||| ||||||||||||| | ||||  |    
T  41174449 tgtgattgatgtattatatgatcatttattatgttaatatgctaactttttaaaaaccatttcatagtgtccctaaattaaaaatgaaaactaaaccatc 41174548  T
Q  103 ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  41174549 ccctcccttcccctcctaaaccctccatccaaacacaccc 41174588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 29798384 - 29798521
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgtt-aatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa 99  Q
    ||||||||||||||||||||||| || |||||| ||||| || ||||| | ||||||||| |||||||||| |||| |||||||||||||||||| ||||    
T  29798384 caagtgtgattgaagtattatatgatcgtttattatgtttaacatgttaattttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactgaa 29798483  T
Q  100 cccccctccctttccctcttaaaccctccatccaaacaca 139  Q
    ||| |  || |||  ||| ||||| |||||||||||||||    
T  29798484 ccctc--ccatttttctcctaaactctccatccaaacaca 29798521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 5730973 - 5730831
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||| ||| || |||| | |||| |||  ||| |||||||||||||||||  | ||||    
T  5730973 aagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagggtccgtaatttaaaaatgaaatctaaacc 5730874  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      ||| || ||||||||| ||||||||||||||||||||||||    
T  5730873 ctcccatctctttccctcctaaaccctccatccaaacacaccc 5730831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 17938250 - 17938115
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| || ||||||||||||| ||| || | ||||||||| ||||| |||| ||||  ||||||||||| ||||| | |||     
T  17938250 aagtgtgattgaagtattatatgatcgtttatcatgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaact 17938151  T
Q  102 c--ccctccctttccctcttaaaccctccatccaaa 135  Q
    |  |||||| || ||||| |||||||||||||||||    
T  17938150 cttccctccattcccctcctaaaccctccatccaaa 17938115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 24565485 - 24565347
Alignment:
Q  6 gtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--cc 103  Q
    ||||||||||||||||||  |||||||||| ||||||| ||| |||||||||||  |||||| || | || |||||||||||||||||||| ||||  ||    
T  24565485 gtgattgaagtattatatgtttgtttatcacgttaataagttaactttttaaaaagcatttcgtaatatccgtaatttaaaaatgaaaagtaaaccctcc 24565386  T
Q  104 cctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||   ||| || || |||||| |||||||||||||||||    
T  24565385 ccagtcttcccttcctaaaccttccatccaaacacaccc 24565347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 2247944 - 2247846
Alignment:
Q  4 gtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaaccc 102  Q
    |||||||||||||||||||| |||||||||||| |||||| ||| |  |||||| | |||||| ||| |||| |||||||||||||||||| |||||||    
T  2247944 gtgtgattgaagtattatataattgtttatcatattaataagttaagattttaataaacattttataatgtccgtaatttaaaaatgaaaaatgaaccc 2247846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 1968500 - 1968352
Alignment:
Q  4 gtgtgattgaagtattatattattgtttatcatgttaatatgttgactt--------tttaaaagacatttcatactgtctgtaatttaaaaatgaaaag 95  Q
    |||||||||||||||||||| || |||||||||||||||||||| ||||        || |||||| |||||||| ||||  |||||||| | |||||||    
T  1968500 gtgtgattgaagtattatatgatcgtttatcatgttaatatgttaacttttaaaaagttaaaaagatatttcatagtgtccataatttaatattgaaaag 1968401  T
Q  96 tgaacc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    | ||||  ||||||||||||||||| |||||||  |||||||| |||||    
T  1968400 taaaccctcccctccctttccctctcaaacccttaatccaaacgcaccc 1968352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 6938395 - 6938490
Alignment:
Q  49 actttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||| |||||| ||| | || |||||||||||||||||||||||||  ||||||| || ||||| |||||| |||||||||||||||||    
T  6938395 actttttaaaaaacattttataatatccgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacaccc 6938490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 53260772 - 53260713
Alignment:
Q  89 tgaaaagtgaacccccctccctttccctcttaaaccctccatccaaacacacccataatt 148  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  53260772 tgaaaagtgaacccccctcccttcccctcctaaaccctccatccaaacacacccttaatt 53260713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 46007844 - 46007742
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgacttttt-aaaagaca-tttcatactgtctgtaatttaaaaatgaaaagtgaa 99  Q
    ||||| |||||||||||||||| ||  ||||||||||||||||||| ||||||| |||| ||| ||||||  |||| |||||||||||||||||||| ||    
T  46007844 aagtgagattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaaacattttcattatgtcggtaatttaaaaatgaaaagtaaa 46007745  T
Q  100 ccc 102  Q
    |||    
T  46007744 ccc 46007742  T

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Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 16400906 - 16400987
Alignment:
Q  7 tgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaa 88  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||||||||   |||||||| ||||  |||||||||||    
T  16400906 tgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaactatttcatagtgtccctaatttaaaaa 16400987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 26167038 - 26167118
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatt 82  Q
    |||||||||||||||||||||| || |||||||||||||||||||| ||| || |||| |||||||| | |||| ||||||    
T  26167038 aagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactcttaaaaaaacatttcaaagtgtccgtaatt 26167118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 34110906 - 34111005
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    ||||||| || || |||||||| || |||||||||||||||||||| ||||||||||| |||||||| | | || ||||||||||||| |||||| ||||    
T  34110906 aagtgtgcttaaaatattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcacagtatc-gtaatttaaaaataaaaagtaaacc 34111004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 35248787 - 35248922
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||| |||||| |||| | |||    | ||||  |||||||||| |||||||| ||||    
T  35248787 aagtgtgattgaagtattatatgattatttatcatgttaatacgttaacttttaaaaaaatattcttgagtgtccataatttaaaattgaaaagtaaacc 35248886  T
Q  102 --cccctccctttccctcttaaaccctccatccaaa 135  Q
      |||||||||  | ||| |||||||||||||||||    
T  35248887 ctcccctccctacctctcctaaaccctccatccaaa 35248922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 36151677 - 36151770
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    |||||||||||||||||||||| || |||||||||||||||||||| |||||| ||||  |||||  || |||   |||||||||||||||||||    
T  36151677 aagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaacttttaaaaat-cattttctagtgttcataatttaaaaatgaaaagt 36151770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 45132644 - 45132559
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaa 88  Q
    |||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||| ||||||| || |||   |||||||||||    
T  45132644 aagtgtgattgaagtattatatgatcgtttatcattttaatatgttaactttttaaaa-acatttcgtagtgtacataatttaaaaa 45132559  T

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Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 37711285 - 37711366
Alignment:
Q  63 atttcatactgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||| ||| |||| |||||||||||||||||  | |||||  ||||||||| ||||| ||||||||||||||||||||||||    
T  37711285 attttatagtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccc 37711366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 2917103 - 2917059
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttga 49  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  2917103 tgtgattgaagtattatatgatcgtttatcatgttaatatgttga 2917059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 6891461 - 6891553
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    |||||||||||||||||||||| || |||||| |||||| ||| || | ||||| ||| ||| |||||| ||||  ||||||||||| |||||    
T  6891461 aagtgtgattgaagtattatatgatcgtttataatgttattattttaatttttttaaaaacaattcatagtgtccataatttaaaaacgaaaa 6891553  T

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Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 47433851 - 47433760
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    |||||||||||||||||||||| || |||||| |||||| ||| || | ||||||||| ||||| |||| ||||  ||||||||||| |||||    
T  47433851 aagtgtgattgaagtattatatgatcgtttat-atgttattattttaattttttaaaaaacattccataatgtccataatttaaaaacgaaaa 47433760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 54935136 - 54935063
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc---ccctccctttccctcttaaaccctccatccaaacacacccataat 147  Q
    |||||||||||| ||||||| |||||   ||||||||| ||||| ||||||||| |||||||||||||| ||||    
T  54935136 gtaatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaaccctcaatccaaacacacccttaat 54935063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 46007873 - 46007942
Alignment:
Q  73 gtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacac 140  Q
    ||||| |||||||||| ||||||| |||||  ||||||||| ||||| ||||||||| ||||||||||||    
T  46007873 gtctgcaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 54320502 - 54320436
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc-ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| |||||   ||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  54320502 gtaatttaaaaaagaaaatcaaaccctccctccctttccctcctaaaccctcaatccaaacacaccc 54320436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 1968535 - 1968602
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||||||||| | ||| |  ||||||||| ||||| ||||||||| ||||||||||||||    
T  1968535 gtaatttaaaaatgaaaattaaactcttccctcccttcccctcctaaaccctcaatccaaacacaccc 1968602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 36278356 - 36278444
Alignment:
Q  6 gtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    |||||||||||| ||||  ||| |||||||| |||||| ||| | ||| ||||| | ||||| || ||||||||||||||||| |||||    
T  36278356 gtgattgaagtactataagattatttatcatattaatacgttaaatttataaaaaatatttcgtagtgtctgtaatttaaaaacgaaaa 36278444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 56135817 - 56135750
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||||  |||| |||||||  ||||||||| ||||| ||||||||| ||||||||||||||    
T  56135817 gtaatttaaaaaataaaaatgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 56135750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 37761625 - 37761707
Alignment:
Q  62 catttcatactgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||| ||||  ||||||||||| ||||||  | |||  ||||||||| |||| ||||| |||||||||||||||||||    
T  37761625 catttcataatgtccataatttaaaaaagaaaaggaagccctcccctcccttccccttttaaatcctccatccaaacacaccc 37761707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 4437466 - 4437428
Alignment:
Q  102 cccctccctttccctcttaaaccctccatccaaacacac 140  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  4437466 cccctccctttccatcctaaaccctccatccaaacacac 4437428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 37711244 - 37711286
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatat 44  Q
    |||||||||||||||||||||| ||  ||||||||||||||||    
T  37711244 aagtgtgattgaagtattatatgatcatttatcatgttaatat 37711286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 44784093 - 44784186
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    |||||||||||||||||||||| || |||||| | ||||||||||| ||  |||| || | ||||| || |||  |||||||||||| |||||||    
T  44784093 aagtgtgattgaagtattatatgatcgtttataaggttaatatgttaac-gtttagaaaatatttcgtagtgttcgtaatttaaaaacgaaaagt 44784186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 54576410 - 54576329
Alignment:
Q  62 catttcatactgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacacc 141  Q
    ||||| ||| |||| ||||| |||||| ||||||| | |||  ||||||||| ||||  |||||||||||||||||||||||    
T  54576410 cattttataatgtccgtaatctaaaaaagaaaagtaagccctcccctcccttccccttctaaaccctccatccaaacacacc 54576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 22186788 - 22186720
Alignment:
Q  76 tgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||||| |||||||||| |  ||||||||| || || ||||||||| ||||||| ||||||    
T  22186788 tgtaatttaaaaattaaaagtgaactctgccctcccttcccttcctaaaccctcaatccaaatacaccc 22186720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 31348500 - 31348564
Alignment:
Q  80 atttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||| ||||||| |||||  ||||||||| ||||| ||||| ||| ||||||||||||||    
T  31348500 atttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaactctcaatccaaacacaccc 31348564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 7977673 - 7977740
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||||  |||| |||||||  |||||| || ||||| ||||||||| ||||||||||||||    
T  7977673 gtaatttaaaaaataaaattgaaccctcccctcctttcccctcataaaccctcaatccaaacacaccc 7977740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 47433881 - 47433952
Alignment:
Q  73 gtctgtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||||||| ||||||| ||||  || ||||||| ||||| |||||| || | ||||||||||||    
T  47433881 gtctgtaatttaaaaaagaaaagtaaaccctcctctcccttcccctcctaaaccgtcaacccaaacacaccc 47433952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 49735695 - 49735735
Alignment:
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||| ||||| ||||||||| ||||||||||||||    
T  49735695 cccctcccttcccctcctaaaccctcaatccaaacacaccc 49735735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 54576505 - 54576572
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||||| |||||||||| |  | ||||||| | ||||||||||||  ||||||||||||||    
T  54576505 gtaatttaaaaattaaaagtgaactcttctctcccttcctctcttaaacccttaatccaaacacaccc 54576572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 8e-43; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 38510038 - 38509895
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||||| | |||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  38510038 caagtgtgattgaagtattatattatcgtttatcgtgttaagatgttaattttttaaaagacatttcatagtgtccgtaatttaaaaatgaaaagtgaac 38509939  T
Q  101 c--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |  || ||||||| ||||| ||||||||| ||||||||||||||    
T  38509938 cctcctctcccttcccctcctaaaccctctatccaaacacaccc 38509895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 2859075 - 2858933
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| ||||||||| |||| | |||||| ||||||||||  ||||||||||  |||||||||||| ||||||||||| ||||    
T  2859075 aagtgtgattgaagtattatatgattgtttataatgtaagtatgttaactttttaaataacatttcatagggtctgtaatttagaaatgaaaagtaaacc 2858976  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      |||||||||||||||| ||||||||||||||||||||||||    
T  2858975 ctcccctccctttccctcctaaaccctccatccaaacacaccc 2858933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 40095076 - 40094934
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| || ||||||||||||||| |||| |||||||| || |||||||||| |||| |||||||||||||||||||| ||||    
T  40095076 aagtgtgattgaagtattatatgatcgtttatcatgttaatttgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaacc 40094977  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      ||||| |||| ||||| ||||||||||||||||||||||||    
T  40094976 ctccccttccttcccctcctaaaccctccatccaaacacaccc 40094934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 35349598 - 35349467
Alignment:
Q  9 attgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacccccctcc 108  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||| || ||||||||   |||| |||||||||||||||||||| ||||| || ||    
T  35349598 attgaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttcag--tgtccgtaatttaaaaatgaaaagtaaaccctccccc 35349501  T
Q  109 ctttccctcttaaaccctccatccaaacacaccc 142  Q
    | | ||||||||||||||||||||||||||||||    
T  35349500 cctcccctcttaaaccctccatccaaacacaccc 35349467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 41498505 - 41498648
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa-- 99  Q
    |||||||||||||||||||||| || |||||||||||||||||||| |||||||| || |||||||||| |||| |||||||||||||||||||| ||      
T  41498505 aagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaatc 41498604  T
Q  100 cccccctccctt-tccctcttaaaccctccatccaaacacaccc 142  Q
    | ||||||||||  ||||| ||||| ||||||||||||||||||    
T  41498605 ctcccctcccttacccctcctaaactctccatccaaacacaccc 41498648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 30010433 - 30010575
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    ||||||| |||||||||||||| || |||||| ||||||||||||| ||| ||||||| ||||||| || |||| ||||||| |||||||||||| ||||    
T  30010433 aagtgtggttgaagtattatatgatcgtttataatgttaatatgttaactatttaaaaaacatttcgtagtgtccgtaatttcaaaatgaaaagtaaacc 30010532  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      |||||||||| ||||  ||||||||||||||||||||||||    
T  30010533 ctcccctcccttccccttctaaaccctccatccaaacacaccc 30010575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 8529900 - 8530039
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac- 100  Q
    |||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||| | |||||||| |||| |||||||||||||||||||| |||     
T  8529900 aagtgtgattgaagtattatatgatcgtttaccatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaact 8529999  T
Q  101 -ccccctccctttccctcttaaaccctccatccaaacaca 139  Q
      | |||||||| ||||| ||||| || ||||||||||||    
T  8530000 ttcacctcccttcccctcctaaactcttcatccaaacaca 8530039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 32951461 - 32951322
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||  || |||||||||||||||||||| |||||||| || |||||||||  |||| |||||||||||||||||||| |  |    
T  32951461 aagtgtgattgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcattgtgtccgtaatttaaaaatgaaaagt-atac 32951363  T
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||| ||||||| |  ||| |||||||||||||||    
T  32951362 cccctcccttcccctcttgagtccttcatccaaacacaccc 32951322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 12234110 - 12234252
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    ||||||||||||| |||| |||| ||  | ||| ||||||||||| | ||||| ||||| ||||||| || |||| |||||||||||||||||| | |||    
T  12234110 caagtgtgattgatgtataatatgatcatatattatgttaatatgctaactttataaaaaacatttcgtagtgtccgtaatttaaaaatgaaaactaaac 12234209  T
Q  101 c--cccctccctttccctcttaaaccctccatccaaacacacc 141  Q
    |  |||||||||| ||||| |||||||||||||||||||||||    
T  12234210 cctcccctcccttcccctcctaaaccctccatccaaacacacc 12234252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 36285718 - 36285614
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    ||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| | |||| ||| |||  ||||||||||||||| || | |||    
T  36285718 caagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatattttatagtgttcgtaatttaaaaatgataaataaac 36285619  T
Q  101 ccccc 105  Q
    |||||    
T  36285618 ccccc 36285614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 50744424 - 50744332
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgact-ttttaaaagacatttcatactgtctgtaatttaaaaatgaaa 93  Q
    |||||||||||||||||||||| || |||||||||||||||||||| ||| ||| |||| |||||||||| |||| |||||||||||||||||    
T  50744424 aagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactctttaaaaaaacatttcatagtgtccgtaatttaaaaatgaaa 50744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 7444595 - 7444736
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    ||||||||||||||||||||||| || |||||| ||||||||||||| |||||||||||  ||||| ||| |||| ||||||| |||||||||| | |||    
T  7444595 caagtgtgattgaagtattatatgatcgtttattatgttaatatgttaactttttaaaaatcattttatagtgtccgtaattttaaaatgaaaactaaac 7444694  T
Q  101 c--cccctccctttccctcttaaaccctccatccaaacacac 140  Q
    |  |||||| ||| || |  ||||| || |||||||||||||    
T  7444695 cctcccctctcttccctttctaaactcttcatccaaacacac 7444736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 51597769 - 51597863
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    |||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||  ||||||||| |||   |||||||||| ||||||||    
T  51597769 aagtgtgattgaagtattatatgattgtttatcatcttaatatgttaactttttaaaaaccatttcatagtgttcataatttaaaattgaaaagt 51597863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 20576269 - 20576136
Alignment:
Q  7 tgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa--ccccc 104  Q
    ||||||||||||||||| || ||||||||||||||||| || ||| ||||||| |||||||  | |||| |||||||||||||||||  | ||  | |||    
T  20576269 tgattgaagtattatatgatcgtttatcatgttaatatattaactctttaaaaaacatttc--agtgtccgtaatttaaaaatgaaatctaaactctccc 20576172  T
Q  105 ctccctttccctcttaaaccctccatccaaacacac 140  Q
    ||||||| ||||| ||||||||| ||||||||||||    
T  20576171 ctcccttcccctcctaaaccctctatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 26940987 - 26940847
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    ||||||||||||||||||||||| | ||||||  ||||||||| ||| |||||| || | | |||||||| ||||| |||||||||||| ||||||||||    
T  26940987 caagtgtgattgaagtattatatgactgtttacgatgttaataagttaacttttaaacaaatatttcatagtgtctataatttaaaaataaaaagtgaac 26940888  T
Q  101 cc-ccctccctttccctcttaaaccctccatccaaacacac 140  Q
    || |||  |  ||| ||||||||||||| || |||||||||    
T  26940887 cctcccatctcttcactcttaaaccctcaattcaaacacac 26940847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 10391976 - 10392108
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgacttttt-aaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacccc 103  Q
    ||||||| ||||||||||| |  |||||||||||||||||||| ||||||| |||| |||||| ||| ||| ||||||||||||| ||||||| ||   |    
T  10391976 tgtgattaaagtattatatgaccgtttatcatgttaatatgttaactttttaaaaaaacatttaataatgtttgtaatttaaaaacgaaaagtaaa---c 10392072  T
Q  104 cctccctttccctcttaaaccctccatccaaacaca 139  Q
     ||| | | ||||| |||||||||||||||||||||    
T  10392073 tctctcctcccctcctaaaccctccatccaaacaca 10392108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 49946728 - 49946642
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatga 91  Q
    ||||||||||||||||||| ||  ||||||||||||||||||| |||||| |||| | |||| ||| |||| |||||||||||||||    
T  49946728 tgtgattgaagtattatatgataatttatcatgttaatatgttaacttttaaaaaaatattttatagtgtccgtaatttaaaaatga 49946642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 45585828 - 45585739
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatga 91  Q
    ||||||||| |||||| ||||| || |||||||||||||||||||| |||||| |||| |||||| ||| | ||| ||||||||||||||    
T  45585828 aagtgtgatcgaagtactatatgatcgtttatcatgttaatatgttaacttttaaaaaaacattttatagtatctataatttaaaaatga 45585739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 28770852 - 28770964
Alignment:
Q  30 ttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacccccc--tccctttccctcttaaaccctc 127  Q
    |||||||||||||||||| | |||||| || |||||||||| |||  ||||||||||||| |||| | ||||| ||  ||| |||||||| |||||| ||    
T  28770852 ttatcatgttaatatgttaattttttataaaacatttcataatgt--gtaatttaaaaataaaaaataaaccctccactccttttccctcctaaaccttc 28770949  T
Q  128 catccaaacacaccc 142  Q
    |||||||||||||||    
T  28770950 catccaaacacaccc 28770964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 42230639 - 42230713
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtct 76  Q
    |||||||||||||||||||||| ||||||||| |||||||||| || ||||| ||||| |||||| ||| |||||    
T  42230639 aagtgtgattgaagtattatatgattgtttattatgttaatattttaactttataaaaaacattttatagtgtct 42230713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 41676380 - 41676482
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactt--tttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa 99  Q
    ||||||||||| |||||||||| || |||||||||||||||||||| | ||     |||| |||||| ||| |||| |||||||||||||||||||| ||    
T  41676380 aagtgtgattgtagtattatatgatcgtttatcatgttaatatgttaatttaaaaaaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaa 41676479  T
Q  100 ccc 102  Q
    |||    
T  41676480 ccc 41676482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 43552109 - 43551997
Alignment:
Q  28 gtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaaccc-ccctccctttc-cctcttaaaccc 125  Q
    |||||||||||||||||||| ||||||||||| ||||||||||      |||||||||||||||||| | ||||| | |  |||||| || | ||||||     
T  43552109 gtttatcatgttaatatgttaactttttaaaaaacatttcata----acgtaatttaaaaatgaaaaataaaccctcacatcctttcgccgcctaaacct 43552014  T
Q  126 tccatccaaacacaccc 142  Q
    |||||||||||||||||    
T  43552013 tccatccaaacacaccc 43551997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 20607420 - 20607460
Alignment:
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  20607420 cccctcccttcccctcctaaaccctccatccaaacacaccc 20607460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 35349638 - 35349705
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| ||||||| |||||  ||||||||| ||||| ||||||||  ||||||||||||||    
T  35349638 gtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaacacaccc 35349705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 40095106 - 40095177
Alignment:
Q  73 gtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||||||| ||||||| |||||  || ||||||| |||  ||||||||| ||||||||||||||    
T  40095106 gtctgtaatttaaaaacgaaaagtaaacccttccttcccttttccttctaaaccctcaatccaaacacaccc 40095177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 41498471 - 41498405
Alignment:
Q  78 taatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||| ||||||| |||||  ||||| ||| ||||| ||||||||| ||||||||||||||    
T  41498471 taatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacaccc 41498405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 525275 - 525343
Alignment:
Q  76 tgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||||| |||||||||| |  || |||||| || || ||||||||| ||||||||||||||    
T  525275 tgtaatttaaaaattaaaagtgaactcttccttcccttcccgtcctaaaccctcaatccaaacacaccc 525343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 35513000 - 35513037
Alignment:
Q  102 cccctccctttccctcttaaaccctccatccaaacaca 139  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  35513000 cccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 44211048 - 44211011
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgtt 39  Q
    |||||||||||||||||||||| || ||||||||||||    
T  44211048 aagtgtgattgaagtattatatgatcgtttatcatgtt 44211011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 12234078 - 12234011
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| ||||| | | |||  ||||||||| ||||| ||||||||| ||||||||||||||    
T  12234078 gtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacaccc 12234011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 26324055 - 26324015
Alignment:
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||| ||||| ||||||||| ||||||||||||||    
T  26324055 cccctcccttcccctcctaaaccctcaatccaaacacaccc 26324015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 30010373 - 30010333
Alignment:
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||| ||||| ||||||||| ||||||||||||||    
T  30010373 cccctcccttcccctcctaaaccctcaatccaaacacaccc 30010333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 4833671 - 4833532
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--c 102  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||| |||||||| || |||||||||| ||||||||||||||||||||||||| ||||  |    
T  4833671 tgtgatttaagtattatatgattgtttatcatgttaataggttaactttttataaaacatttcatagtgtctgtaatttaaaaatgaaaagtaaaccctc 4833572  T
Q  103 ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||| ||||| ||||||||||||||||||| ||||    
T  4833571 ccctcccttcccctcctaaaccctccatccaaacataccc 4833532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 18231693 - 18231829
Alignment:
Q  8 gattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa--cccccc 105  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||||||| ||  | ||||    
T  18231693 gattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtttgtaatttaaaaatgaaaagtaaatcctcccc 18231792  T
Q  106 tccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||| ||||| ||||| ||||||||||||||||||    
T  18231793 tcccttcccctcctaaacgctccatccaaacacaccc 18231829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 40196675 - 40196533
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||| || |||||| ||| |||| |||||| ||||||||||||| ||||    
T  40196675 aagtgtgattgaagtattatatgattgtttatcaggttgatatgttaactttttataaaacattttatagtgtccgtaattcaaaaatgaaaagtaaacc 40196576  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      || ||||||| |||||  |||||||||||||||||||||||    
T  40196575 ctcctctcccttcccctcccaaaccctccatccaaacacaccc 40196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 41497100 - 41496958
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||| ||||||| ||  ||||||||||||||||||| | ||||||||| ||||||| || |||| ||||||||||||| |||||| || |    
T  41497100 aagtgtgattgaagaattatatgatcatttatcatgttaatatgttaaatttttaaaaaacatttcctattgtccgtaatttaaaaataaaaagtaaatc 41497001  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      |||||||||| ||||| ||||||||||||||||||||||||    
T  41497000 atcccctcccttcccctcctaaaccctccatccaaacacaccc 41496958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 34235150 - 34235010
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa-- 99  Q
    |||||||||||||||||||||| |||||||||||| |||||||||| |||||||| || |||||||||| |||| |||||||||||||||||||| ||      
T  34235150 aagtgtgattgaagtattatatgattgtttatcatattaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaatt 34235051  T
Q  100 cccccctccctttccctcttaaaccctccatccaaacacac 140  Q
    | |||||| | | ||  || |||||||||||||||||||||    
T  34235050 ctcccctctcgtccctactcaaaccctccatccaaacacac 34235010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 33655251 - 33655151
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||| ||||    
T  33655251 aagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaacc 33655152  T
Q  102 c 102  Q
    |    
T  33655151 c 33655151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 47390959 - 47391105
Alignment:
Q  5 tgtgattgaagtattatatta-ttgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa--cc 101  Q
    ||||||||||||||||||| | |||||||||||||||||||||| || |||||||| |  ||| ||| |||| ||||||||||||||||||   ||  |     
T  47390959 tgtgattgaagtattatatgacttgtttatcatgttaatatgttaacattttaaaaaatgttttatagtgtccgtaatttaaaaatgaaaaccaaactct 47391058  T
Q  102 cccctccctttccctcttaaaccctccatccaaacacacccataatt 148  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||    
T  47391059 cccctcccttcccctcttaaaccctccatccaaacacacccttaatt 47391105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 13425263 - 13425121
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||||||| |||| | ||||  || |||||||||||||||||| |||| | ||||    
T  13425263 aagtgtgaatgaagtataatatgattgtttatcatgttaatatgttgacttttgaaaaaatattttgtagtgtctgtaatttaaaaataaaaaataaacc 13425164  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      || || |||| ||||| ||||||||| ||||||||||||||    
T  13425163 atcctcttccttcccctcctaaaccctctatccaaacacaccc 13425121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 10315735 - 10315872
Alignment:
Q  3 agtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa--c 100  Q
    ||||||||||||||||||||| || ||||||| |||||||||||| | ||||||||| |||||||||| |||| ||| |||||||||||||| | ||       
T  10315735 agtgtgattgaagtattatataatcgtttatcttgttaatatgttaaatttttaaaaaacatttcatagtgtccgtattttaaaaatgaaaaataaatca 10315834  T
Q  101 ccccctccctttccctcttaaaccctccatccaaacac 138  Q
    ||| ||||||| ||||| |||||| |||||||||||||    
T  10315835 ccctctcccttcccctcctaaaccttccatccaaacac 10315872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 24970308 - 24970214
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    |||||||||||||||||||||| || |||||||| ||||||||||| ||||||||||| | |||||||| | || ||||||||||||||||||||    
T  24970308 aagtgtgattgaagtattatatgatcgtttatcaagttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagt 24970214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 22163252 - 22163167
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaa 88  Q
    |||||||||||||||||||||| || |||||||||||||||||||| ||||| ||||| |||||||||| |||| ||||||||||||    
T  22163252 aagtgtgattgaagtattatatgatcgtttatcatgttaatatgtt-actttctaaaaaacatttcatagtgtccgtaatttaaaaa 22163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 22221960 - 22221875
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaa 88  Q
    |||||||||||||||||||||| || |||||||||||||||||||| ||||| ||||| |||||||||| |||| ||||||||||||    
T  22221960 aagtgtgattgaagtattatatgatcgtttatcatgttaatatgtt-actttctaaaaaacatttcatagtgtccgtaatttaaaaa 22221875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 1051641 - 1051543
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||| |||||||||  |||| ||||||||||||||||| || ||||    
T  1051641 aagtgtgattgaagcattatatgattgtttatcatg-taatatgttaactttttaaaaaacatttcat-gtgtccgtaatttaaaaatgaaatgttaacc 1051544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 13771089 - 13770949
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa-- 99  Q
    ||||||||||  ||| |||||| ||||||||||||||||||||||| |||||||| |  | |||| ||| |||| ||||||||||||| | |||| ||      
T  13771089 aagtgtgattcgagtgttatatcattgtttatcatgttaatatgttaactttttata--atattttatagtgtccgtaatttaaaaataataagtaaatc 13770992  T
Q  100 cccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    | |||||||||| ||||| |||| |||| ||||||||||||||    
T  13770991 ctcccctcccttcccctcctaaatcctcaatccaaacacaccc 13770949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 25887293 - 25887435
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttt-taaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa- 99  Q
    ||||||||||| |||||||||| |||||||||||| |||||||||| ||||||  |||| |||||||||  | |  ||||||||||||||||| || ||     
T  25887293 aagtgtgattggagtattatatgattgtttatcatattaatatgttaacttttaaaaaaaacatttcatgattttcgtaatttaaaaatgaaatgtaaac 25887392  T
Q  100 -cccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
     | |||||||||| ||||| |||||||| || ||||||||||||    
T  25887393 tctcccctcccttcccctcctaaacccttca-ccaaacacaccc 25887435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 140
Target Start/End: Original strand, 42306456 - 42306571
Alignment:
Q  27 tgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaacc 124  Q
    ||||||| | ||||||||| | ||||||||||| |||||||||| |||| |||||||||||||||||| | ||||  ||||||  || ||||| ||||||    
T  42306456 tgtttatgaggttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaattaaaccatcccctcaattcccctcctaaacc 42306555  T
Q  125 ctccatccaaacacac 140  Q
    ||| ||||||||||||    
T  42306556 ctcaatccaaacacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 30592389 - 30592254
Alignment:
Q  9 attgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--cccct 106  Q
    ||||||||||||||| ||| |||||||| | | ||| |  | |||||||||  ||||| ||| ||||||||||||||||| ||||||| | ||  ||| |    
T  30592389 attgaagtattatatgattatttatcatatgattatttcaattttttaaaaatcattttatagtgtctgtaatttaaaaaagaaaagtaagccctccctt 30592290  T
Q  107 ccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||| |||| |||||||||||| ||||||    
T  30592289 ccctttccctcctaaatcctccatccaaatacaccc 30592254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 37417776 - 37417708
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcata 70  Q
    |||||||||||||||||||||| || ||||||||||| |||||||| |||||||| || ||||||||||    
T  37417776 aagtgtgattgaagtattatatgatcgtttatcatgtgaatatgttaactttttagaaaacatttcata 37417708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 45940792 - 45940658
Alignment:
Q  9 attgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac--ccccct 106  Q
    |||||||||||||||||| | |||| ||||||||||  |  |||| ||||| |||||||||| |||| ||||| ||||||| |||||| |||    ||||    
T  45940792 attgaagtattatattatcgcttattatgttaatatactatctttgtaaaaaacatttcatagtgtccgtaatataaaaataaaaagtaaactttgccct 45940693  T
Q  107 ccctttccctcttaaaccctccatccaaacacacc 141  Q
    ||||| ||||  |||||| ||||||||||||||||    
T  45940692 cccttccccttctaaaccttccatccaaacacacc 45940658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 31553287 - 31553186
Alignment:
Q  40 aatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc-cccctccctttccctcttaaaccctccatccaaacac 138  Q
    |||||||| ||||||||||| |||||||||| |||| || |||| ||||| |||||||| || | |||||||| ||||| |||| |||||||||||||||    
T  31553287 aatatgttaactttttaaaaaacatttcataatgtccgttattt-aaaattaaaagtgaccctctcctcccttcccctcctaaa-cctccatccaaacac 31553190  T
Q  139 accc 142  Q
    ||||    
T  31553189 accc 31553186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 33519209 - 33519291
Alignment:
Q  62 catttcatactgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||| ||| ||||||||||||||| | ||||||| | |||  ||||||||| ||||| ||||||||||||||||||||||||    
T  33519209 cattttataatgtctgtaatttaaagaagaaaagtaatccctcccctcccttcccctcctaaaccctccatccaaacacaccc 33519291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 31571611 - 31571569
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatat 44  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  31571611 aagtgtgattgaagtattatataattgtttatcatgttaatat 31571569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 48881640 - 48881559
Alignment:
Q  63 atttcatactgtctgtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||| ||| |||| |||||||||||| ||||||| | ||  |||||||||| ||||| ||||||||||||||||||||||||    
T  48881640 attttataatgtccgtaatttaaaaaagaaaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacaccc 48881559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 34228461 - 34228408
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgacttttt 55  Q
    |||||||||||||||||||||| |||| ||||||| |||||||||| |||||||    
T  34228461 aagtgtgattgaagtattatatgattgcttatcatattaatatgttaacttttt 34228408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 43230337 - 43230476
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa-- 99  Q
    ||||| |||||||| ||||||  || |||||||||||||||||||| |||||| |||| | | |||| | |||| ||||||||||||| |||||| ||      
T  43230337 aagtgcgattgaagaattatacgatcgtttatcatgttaatatgttaacttttaaaaaaaaaattca-agtgtccgtaatttaaaaataaaaagtaaact 43230435  T
Q  100 cccccctccctttccctcttaaaccctccatccaaacacac 140  Q
    | ||||| | || | ||| |||||||| |||||||||||||    
T  43230436 ctccccttctttcctctcataaaccctacatccaaacacac 43230476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 37925909 - 37925842
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||||  ||||||||||||  ||||||||| ||||| ||||||||| ||||||||||||||    
T  37925909 gtaatttaaaaaataaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 37925842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 39856041 - 39856108
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| ||||||| |||||  ||||||||| ||||| ||||||||| ||||||||||||||    
T  39856041 gtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 39856108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 17852972 - 17853103
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||| ||||||||| || ||||||||||||  ||| ||  |||||||||| || ||||||| ||   |||||||||||||||||||| | ||    
T  17852972 aagtgtgattgaggtattatatgatcgtttatcatgttgttattttatctttttaaaa-acttttcatagtgctcgtaatttaaaaatgaaaagtaagcc 17853070  T
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |        | ||||| ||||||||||||||||||||||||    
T  17853071 c--------tcccctcctaaaccctccatccaaacacaccc 17853103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 41008284 - 41008421
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgacttttta--aaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa 99  Q
    |||||||||||||||  ||||| ||||||||||||||||||||||| |||||| |  | | | |  ||||| | || ||||||||||||||||| || ||    
T  41008284 aagtgtgattgaagt--tatatgattgtttatcatgttaatatgttaacttttgaagacaaaaaaatcatagtatccgtaatttaaaaatgaaatgtaaa 41008381  T
Q  100 cccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
       | || |||| ||||| |||||||| |||||||||||||||    
T  41008382 ---ctcttccttcccctcctaaaccctgcatccaaacacaccc 41008421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 47229973 - 47229907
Alignment:
Q  4 gtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcata 70  Q
    ||||||||||| ||||| || |||||||||||||||||||||||  |||||||| | | ||||||||    
T  47229973 gtgtgattgaattattacatgattgtttatcatgttaatatgttcgctttttaagaaatatttcata 47229907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 32872899 - 32872788
Alignment:
Q  27 tgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacccccctccctttccctcttaaaccct 126  Q
    ||||||||||||||||||||| |||||||||||   |||| ||| | |  |||||||||||| ||||||| ||   | |||| || ||||| ||||||||    
T  32872899 tgtttatcatgttaatatgttaactttttaaaaagtattttataatattcgtaatttaaaaaagaaaagtaaa---ctctcctttcccctcctaaaccct 32872803  T
Q  127 ccatccaaacacacc 141  Q
     |||| |||||||||    
T  32872802 tcatctaaacacacc 32872788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 36267594 - 36267554
Alignment:
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  36267594 cccctcccttcccctcctaaaccctccatccaaacacaccc 36267554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 141
Target Start/End: Complemental strand, 16833719 - 16833684
Alignment:
Q  106 tccctttccctcttaaaccctccatccaaacacacc 141  Q
    |||||||||||||||||||||| |||||||||||||    
T  16833719 tccctttccctcttaaaccctcaatccaaacacacc 16833684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 23116403 - 23116308
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagaca-tttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    |||||||||||||||||||||| ||  |||||||||||  ||| |  | ||||||| | ||| ||| ||| ||||||||||||||||| |||||||    
T  23116403 aagtgtgattgaagtattatataatcatttatcatgttgctatttcaattttttaataaacacttttatagtgtctgtaatttaaaaaagaaaagt 23116308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 25875200 - 25875251
Alignment:
Q  262 catggtatcacgagctcccga-ttttggggtcttgcttccgcgtaaatccta 312  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||| ||||    
T  25875200 catggtatcacgagctcccgatttttggggtctcgcttccgcataaacccta 25875251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 28074186 - 28074104
Alignment:
Q  62 catttcatactgtctgtaatttaaaaatgaaaagtgaa--cccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||| ||| |||| |||||||||||| |||||||||   | |||||||||| ||||| |||||| || ||||||||||||||    
T  28074186 cattttataatgtccgtaatttaaaaaagaaaagtgagttctcccctcccttcccctcctaaaccttcaatccaaacacaccc 28074104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 43230304 - 43230239
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacac 140  Q
    |||||||||||| ||||||| |||||  |||| |||||| ||||||||||| | ||||||||||||    
T  43230304 gtaatttaaaaaagaaaagtaaaccctccccttcctttctctcttaaacccccaatccaaacacac 43230239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 33519137 - 33519053
Alignment:
Q  56 aaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacac 138  Q
    |||| |||||| ||| |||  ||||||||||||  |||||||| |||  ||||||||| ||||| |||| |||||||||||||||    
T  33519137 aaaaaacattttatattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaacctccatccaaacac 33519053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 36267728 - 36267796
Alignment:
Q  76 tgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||||  |||| ||| |||  ||||||||| ||||| ||||||||| ||||||||||||||    
T  36267728 tgtaatttaaaaaataaaaatgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 36267796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 4835547 - 4835480
Alignment:
Q  77 gtaatttaaaaatgaaaagtga--acccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| ||||||| |  || |||||||||||| ||| ||||||||| ||| ||||||||||    
T  4835547 gtaatttaaaaaagaaaagtaagcacacccctccctttctctcctaaaccctcaatctaaacacaccc 4835480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 25887233 - 25887193
Alignment:
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||| ||||| ||||||||| ||||||||||||||    
T  25887233 cccctcccttcccctcataaaccctcaatccaaacacaccc 25887193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 26365871 - 26365907
Alignment:
Q  4 gtgtgattgaagtattatattattgtttatcatgtta 40  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  26365871 gtgtgattgaagtattatatgattgtttctcatgtta 26365907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 31364237 - 31364285
Alignment:
Q  92 aaagtgaacccccctccctttccctcttaaaccctccatccaaacacac 140  Q
    ||||| ||||| |||||||| ||||| ||||||||| ||||||||||||    
T  31364237 aaagtaaaccctcctcccttcccctcctaaaccctcaatccaaacacac 31364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 31571646 - 31571713
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| ||||||| ||| |  ||||| ||| ||||| ||||||||| ||||||||||||||    
T  31571646 gtaatttaaaaaagaaaagtaaactctcccctcgcttcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 42087096 - 42087188
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    |||||| |||||| |||||||| || |||| ||| ||||||||| | ||||||||||| || ||  ||| |  | ||||||||||||||||||    
T  42087096 aagtgtaattgaattattatataatcgtttgtcacgttaatatgctaactttttaaaaaactttgtataatacccgtaatttaaaaatgaaaa 42087188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 41110464 - 41110323
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||| || | |||||||| |||| |||||||||||||||||||| ||||    
T  41110464 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaacc 41110365  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacacc 141  Q
      | |||||||| ||||| |||| ||||||||||||||||||    
T  41110364 ttctcctcccttcccctcctaaatcctccatccaaacacacc 41110323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 24560321 - 24560460
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa--ccc 102  Q
    ||||||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||| ||  | |    
T  24560321 tgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtcggtaatttaaaaatgaaaagtaaactctc 24560420  T
Q  103 ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    || ||| || ||||| ||||||||||||||||||||||||    
T  24560421 ccatccgttcccctcctaaaccctccatccaaacacaccc 24560460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 16275849 - 16275707
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa- 99  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||| |||||||| || |||||||||| |||| | |||||||||||||| ||||||     
T  16275849 caagtgtgattgaagtattatatggttgtttatcatgttaataagttaactttttataaaacatttcataatgtccgaaatttaaaaatgaatagtgaac 16275750  T
Q  100 -cccccctccctttccctcttaaaccctccatccaaacacacc 141  Q
     | |||||||||||||||  |||||| ||||||||||||||||    
T  16275749 tctcccctccctttcccttataaaccatccatccaaacacacc 16275707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 41040089 - 41039951
Alignment:
Q  6 gtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaaccc--c 103  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||| || | |||||||| |||||||||||||||| |||||| | || ||  |    
T  41040089 gtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtctgtaatttaaaattgaaaattaaagcctac 41039990  T
Q  104 cctccctttccctcttaaaccctccatccaaacacaccc 142  Q
     ||| ||| ||||| |||||| |||||||||||||||||    
T  41039989 gctctcttcccctcctaaaccttccatccaaacacaccc 41039951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 9312614 - 9312477
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||| |||||||| || | |||||||| |||||||||||||||||||||||   ||      
T  9312614 aagtgtgatttgagtattatatgattgtttatcatgttaatatgttaactttttacaaaatatttcatagtgtctgtaatttaaaaatgaaaatcaaa-- 9312517  T
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
     ||||||||| |||| |||||||||| ||||||||| ||||    
T  9312516 -ccctcccttcccctattaaaccctcaatccaaacataccc 9312477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 27542071 - 27541937
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--c 102  Q
    ||||||||||||||||||| || ||||||||||||||||||||   ||||||| |   |||||||| ||||| |||||||||||||||| |||||||  |    
T  27542071 tgtgattgaagtattatatgatcgtttatcatgttaatatgttagatttttaacaagtatttcatagtgtctctaatttaaaaatgaaatgtgaaccatc 27541972  T
Q  103 ccctccctttccctcttaaaccctccatccaaaca 137  Q
     |||||||| ||||| ||||||||| |||||||||    
T  27541971 tcctcccttcccctcctaaaccctcaatccaaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 36569046 - 36568905
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa-- 99  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||| ||||||| ||| |||||||||| |||  | |||||||||||||||| | ||      
T  36569046 aagtgtgattgaactattatacgattgtttatcatgttaatatgttaactttttgaaaaacatttcatagtgttcgaaatttaaaaatgaaaa-taaact 36568948  T
Q  100 cccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    | ||||||| || | ||| ||||||||||||||||||||||||    
T  36568947 ctcccctccattccactcctaaaccctccatccaaacacaccc 36568905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 220541 - 220448
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    ||||| |||||||||| |||||  ||||||||| ||||||||||||| ||||||||||| |||||||||| |||| ||||||||||||||||||    
T  220541 caagtatgattgaagtgttataagattgtttattatgttaatatgttaactttttaaaaaacatttcataatgtccgtaatttaaaaatgaaaa 220448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 37102292 - 37102155
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    |||||||| |||||||||||||| || ||| || ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||| | |||    
T  37102292 caagtgtggttgaagtattatatgatcgtt-attatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaac 37102194  T
Q  101 ccccctccctttccctcttaaaccctccatccaaacacacccataat 147  Q
    ||        | ||||| |||||||||||||||||||||||| ||||    
T  37102193 cc--------tcccctcctaaaccctccatccaaacacacccttaat 37102155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 21773883 - 21773983
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||| ||||||| || |||  ||||||||||||| |||||| ||||    
T  21773883 aagtgtgattgaagaattatatgattgtttatcatgtaaatatgttaactttttaaaaaacatttcctagtgttcgtaatttaaaaataaaaagtaaacc 21773982  T
Q  102 c 102  Q
    |    
T  21773983 c 21773983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 18654743 - 18654601
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||| ||| || |||| | |||| |||  ||| |||||||||||||||||  | ||||    
T  18654743 aagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagggtccgtaatttaaaaatgaaatctaaacc 18654644  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      ||| || ||||||||| ||||||||||||||||||||||||    
T  18654643 ctcccatctctttccctcctaaaccctccatccaaacacaccc 18654601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 37807181 - 37807275
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    |||||||||||||||||||||| || ||||||||||||||||| || ||||||||||| |||||||||| ||||   |||||||||| |||||||    
T  37807181 aagtgtgattgaagtattatatgatcgtttatcatgttaatatattaactttttaaaaaacatttcatagtgtccaaaatttaaaaacgaaaagt 37807275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 52474019 - 52474157
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--c 102  Q
    ||||||||||||||||||| | |||||||||| |||||||||| |||||||| || | ||||||||   || ||||||||||||| |||||| ||||  |    
T  52474019 tgtgattgaagtattatatgactgtttatcatattaatatgttaactttttacaaaatatttcataggatccgtaatttaaaaataaaaagtaaaccctc 52474118  T
Q  103 ccctccctttccctcttaaaccctccatccaaacacacc 141  Q
    | ||||||| ||||| |||||||  | ||||||||||||    
T  52474119 ctctcccttcccctcctaaacccatcctccaaacacacc 52474157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 30200235 - 30200099
Alignment:
Q  1 caagtgtgattgaagtattatattat---tgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtg 97  Q
    ||||||||||| ||||| ||||| ||   ||||||| ||||||||||||  ||||||||||| |||||||||| |||| |||||||||||||||||| |     
T  30200235 caagtgtgattaaagtactatatgatcgttgtttattatgttaatatgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaacta 30200136  T
Q  98 aacccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||        | ||||| ||||||||||||||||||||||||    
T  30200135 aaccc--------tcccctcctaaaccctccatccaaacacaccc 30200099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 10748406 - 10748299
Alignment:
Q  29 tttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacccccctccctttccctcttaaaccctcc 128  Q
    ||||||||||||||||||| ||||||||||| |||||| ||| || | |||||||||||||| ||| |   | |  ||||||| ||||| ||||||||||    
T  10748406 tttatcatgttaatatgttaactttttaaaaaacattttataatgcccgtaatttaaaaatgtaaact---ctcttctcccttcccctcctaaaccctcc 10748310  T
Q  129 atccaaacaca 139  Q
    |||||||||||    
T  10748309 atccaaacaca 10748299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 28581291 - 28581189
Alignment:
Q  40 aatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaaca 137  Q
    |||||||| ||||||||||| | |||||| | | ||||||||||||||||||||| | ||||  |||||||||| | ||  |||||||||||||||||||    
T  28581291 aatatgttaactttttaaaaaatatttcacaatatctgtaatttaaaaatgaaaactaaaccctcccctcccttcctcttctaaaccctccatccaaaca 28581192  T
Q  138 cac 140  Q
    |||    
T  28581191 cac 28581189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 24253789 - 24253722
Alignment:
Q  78 taatttaaaaatgaaaagtgaac---ccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| ||||||||||   ||||||||||||||||| ||||||||| ||||||||||||||    
T  24253789 taatttaaaaattaaaagtgaacactccccctccctttccctcctaaaccctcaatccaaacacaccc 24253722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 34641151 - 34641233
Alignment:
Q  62 catttcatactgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||| ||| |||| |||||||||||| ||||||| | |||  ||||||||| ||||| ||||||||||||||||||||||||    
T  34641151 cattttataatgtccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacacaccc 34641233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 52185124 - 52185171
Alignment:
Q  9 attgaagtattatattattgtttatcatgttaatatgttgacttttta 56  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  52185124 attgaagtattatatgattgtttatcatgttaatatgttaacttttta 52185171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 2387903 - 2387817
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaa 88  Q
    |||||||||| || |||||||| || ||||||||||||| ||| || |||| |||||| ||||| |||| |||| ||||||||||||    
T  2387903 aagtgtgattaaattattatatgatcgtttatcatgttattattttaacttattaaaaaacattccatagtgtccgtaatttaaaaa 2387817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 25655115 - 25654991
Alignment:
Q  2 aagtgtgattgaagtattatatt--attgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa 99  Q
    ||||||||||||||||||||||   ||  |||||||| |||||||||| ||| || |||| ||||||| || |||  ||||| |||||||||||||| ||    
T  25655115 aagtgtgattgaagtattatatatgatcatttatcatattaatatgttaactcttcaaaaaacatttcttagtgttcgtaatataaaaatgaaaagtaaa 25655016  T
Q  100 cc--cccctccctttccctcttaaa 122  Q
    ||  |||||||||| ||||| ||||    
T  25655015 ccctcccctcccttcccctcctaaa 25654991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 13083005 - 13082856
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttt--------taaaagacatttcatactgtctgtaatttaaaaatgaaa 93  Q
    |||||| ||||||||||||||| || |||||| ||||||||||||| ||||||         |||| |||||||||| |||| ||| ||||||||| |||    
T  13083005 aagtgtaattgaagtattatatgatcgtttattatgttaatatgttaacttttaaaaaataaaaaaaacatttcatagtgtccgtattttaaaaataaaa 13082906  T
Q  94 agtgaacc--cccctccctttccctcttaaaccctccatccaaacacacc 141  Q
    | | ||||  || ||| ||||| ||  |||||||||||||||||||||||    
T  13082905 attaaaccttcctctctctttctcttctaaaccctccatccaaacacacc 13082856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 46556245 - 46556345
Alignment:
Q  3 agtgtgattgaagtattatatt--attgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    |||||||||||||||||||||   |  |||| |||||||||||| || ||||||||||| | || ||||| |||| |||||| ||||||||||||| |||    
T  46556245 agtgtgattgaagtattatatatgaccgtttgtcatgttaatatcttaactttttaaaaaatatgtcatagtgtccgtaattgaaaaatgaaaagtaaac 46556344  T
Q  101 c 101  Q
    |    
T  46556345 c 46556345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 55327474 - 55327563
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    ||||||||||| |||||||  | |||||| ||||||||| | | ||||||||||| |||||||||| |||| || ||||||||| |||||    
T  55327474 tgtgattgaagcattatatgttcgtttattatgttaatacgctaactttttaaaaaacatttcataatgtccgtgatttaaaaacgaaaa 55327563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 24253870 - 24253965
Alignment:
Q  49 actttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||| |||||  ||||| ||| |||| |||||||||||| ||||||| || ||  ||||||||| ||||  ||||||||||||||||||||||||    
T  24253870 actttctaaaactcattttataatgtccgtaatttaaaaaagaaaagtaaatccttccctcccttccccttctaaaccctccatccaaacacaccc 24253965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 10943790 - 10943852
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaaca 137  Q
    ||||||||||||| |||||||||||  |||||| ||||||||| ||||||||| |||||||||    
T  10943790 gtaatttaaaaattaaaagtgaaccctcccctctctttccctcataaaccctcaatccaaaca 10943852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 43005877 - 43005814
Alignment:
Q  7 tgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcata 70  Q
    ||||||||||||||||| ||  |||||||| |||||||||| ||||||||||| | ||||||||    
T  43005877 tgattgaagtattatatgatattttatcatattaatatgttaactttttaaaaaatatttcata 43005814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 40464014 - 40463920
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    ||||| ||||||| | |||||| |||||||||||||||| | | || |  |||||||| ||| || ||| |||| ||||||||||||||||||||    
T  40464014 aagtgagattgaatttttatatgattgtttatcatgttattgttttaatattttaaaaaacaatttatagtgtccgtaatttaaaaatgaaaagt 40463920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 14898077 - 14898128
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgacttt 53  Q
    |||||||||||||||||||||| || ||||||| ||||||||| || |||||    
T  14898077 aagtgtgattgaagtattatatgatcgtttatcgtgttaatatattaacttt 14898128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28582653 - 28582610
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatat 44  Q
    |||||||| ||||||||||||||||| |||||| ||||||||||    
T  28582653 caagtgtggttgaagtattatattatcgtttattatgttaatat 28582610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 139
Target Start/End: Complemental strand, 27197721 - 27197687
Alignment:
Q  105 ctccctttccctcttaaaccctccatccaaacaca 139  Q
    ||||||||||||||||||||||| |||||||||||    
T  27197721 ctccctttccctcttaaaccctctatccaaacaca 27197687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 26135959 - 26136039
Alignment:
Q  63 atttcatactgtctgtaatttaaaaatgaaaagtgaacccccc--tccctttccctcttaaaccctccatccaaacacacc 141  Q
    |||| ||| |||| |||||||||||| ||||||| ||||| ||  |||||| ||||| |||||||||||| ||| ||||||    
T  26135959 attttataatgtccgtaatttaaaaaagaaaagtaaaccctccactcccttcccctcctaaaccctccattcaatcacacc 26136039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 51819267 - 51819146
Alignment:
Q  3 agtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa-cc 101  Q
    ||||||||||||||||||||  || |||||||||||||||        ||||||||| ||||||      |||||||||||||||||||||| | || ||    
T  51819267 agtgtgattgaagtattatacgatcgtttatcatgttaat--------tttttaaaaaacatttg-----gtctgtaatttaaaaatgaaaaataaatcc 51819181  T
Q  102 cccctccctttccctcttaaaccctccatccaaac 136  Q
    |||||| ||| ||||  |||||| |||||||||||    
T  51819180 cccctctcttccccttctaaaccttccatccaaac 51819146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 220573 - 220640
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaa--cccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| ||||||| ||  | ||||||||||  |||| ||||||||||||||||||| ||||    
T  220573 gtaatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaacagaccc 220640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 25655148 - 25655215
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||||||||  | |||||  |||||||||  |||||| ||||||| ||||||||||||||    
T  25655148 gtaatttaaaaatgaaagttaaaccctcccctcccttctcctcttcaaccctcaatccaaacacaccc 25655215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 28582685 - 28582752
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| ||||||| |||||  ||||||||| ||||| |||| ||||  |||||||||||||    
T  28582685 gtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaatcctcagtccaaacacaccc 28582752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 31664427 - 31664391
Alignment:
Q  103 ccctccctttccctcttaaaccctccatccaaacaca 139  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  31664427 ccctcccttcccctcttaaaccctcaatccaaacaca 31664391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 31931969 - 31932005
Alignment:
Q  103 ccctccctttccctcttaaaccctccatccaaacaca 139  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  31931969 ccctcccttcccctcttaaaccctcaatccaaacaca 31932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 41110497 - 41110564
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| ||||||| ||||  || ||||||| |||||  |||||||| ||||||||||||||    
T  41110497 gtaatttaaaaacgaaaagtaaaccttcctctcccttcccctcacaaaccctcaatccaaacacaccc 41110564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 30479861 - 30479721
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa- 99  Q
    ||||||||||||||||||||||||||  |||||||  |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  30479861 caagtgtgattgaagtattatattatcatttatcaccttaatatgttaactttttaaaagacatttcatagtgtctgtaatttaaaaatgaaaagtgaac 30479762  T
Q  100 -cccccctccctttccctcttaaaccctccatccaaacaca 139  Q
     | ||||||| |  ||||| |||| ||||||||||||||||    
T  30479761 tctcccctccatccccctcctaaatcctccatccaaacaca 30479721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 31543215 - 31543073
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| |  |||||| ||||||||||||| ||||||| ||| |||||||||| | || |||||||||||||||||||| ||||    
T  31543215 aagtgtgattgaagtattatatgaccgtttatgatgttaatatgttaacttttttaaaaacatttcatagtttccgtaatttaaaaatgaaaagtaaacc 31543116  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      |||||||||| ||||||||||||||||||||||||| ||||    
T  31543115 ctcccctcccttcccctcttaaaccctccatccaaacataccc 31543073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 36308944 - 36309081
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||| | |||||| | |||  |||||||||| ||||||||| ||||    
T  36308944 aagtgtgattgaagtattatatgattgtttatcatgttaatatgtttacttttaaaaatatatttcacaatgtacgtaatttaaagatgaaaagtaaacc 36309043  T
Q  102 --cccctccctttccctcttaaaccctccatccaaaca 137  Q
      |||||||||| ||||| |||||||||||||||||||    
T  36309044 ctcccctcccttcccctcctaaaccctccatccaaaca 36309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 16653049 - 16653190
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    ||||||||||||||||||||||| || ||||||  |||||||||||| ||||||| ||| |||||||||| |||| |||||||||||||||||| | |||    
T  16653049 caagtgtgattgaagtattatatgatcgtttattttgttaatatgttaactttttcaaaaacatttcataatgtccgtaatttaaaaatgaaaattaaac 16653148  T
Q  101 c--cccctccctttccctcttaaaccctccatccaaacacac 140  Q
    |  | |||||||| |||||||||||| | |||||||||||||    
T  16653149 cctctcctcccttcccctcttaaaccattcatccaaacacac 16653190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 11575549 - 11575415
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||| ||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||| | ||  |||||||| |||||||||| ||||    
T  11575549 aagtgtgattaaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtatccttaatttaagaatgaaaagtaaacc 11575450  T
Q  102 c-ccctccctttccctcttaaaccctccatccaaa 135  Q
    | ||||||||| | ||| |||| ||||||||||||    
T  11575449 ctccctcccttcctctcctaaatcctccatccaaa 11575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 11785633 - 11785769
Alignment:
Q  8 gattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--cccc 105  Q
    ||||||||||||||||  |||||||||||||||||||| | ||||||||||| | |||||||| |||| ||||||||||||||||||   ||||  |||     
T  11785633 gattgaagtattatatgtttgtttatcatgttaatatgctaactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaatcaaaccctccct 11785732  T
Q  106 tccctttccctcttaaaccctccatccaaacacaccc 142  Q
    || ||| ||||| ||||||||||||||||||||||||    
T  11785733 tctcttaccctcctaaaccctccatccaaacacaccc 11785769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 9718619 - 9718490
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaaccccc 104  Q
    ||||||||||||||||||| ||||||||||||||||||||| | |||||||||||  ||||||||| |||| ||||||||||||||||||  ||||||      
T  9718619 tgtgattgaagtattatatgattgtttatcatgttaatatgctaactttttaaaaaccatttcatagtgtccgtaatttaaaaatgaaaatcgaaccc-- 9718522  T
Q  105 ctccctttccctcttaaaccctccatccaaacacaccc 142  Q
          | ||||| ||||||||||||||||||||||||    
T  9718521 ------tcccctcctaaaccctccatccaaacacaccc 9718490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 34634260 - 34634391
Alignment:
Q  18 ttatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--cccctccctttccc 115  Q
    |||||||||||||||  ||||||||||||| ||||||||||||| |||||||| |||| ||||||||||||| |||| ||||||  | | |||||| |||    
T  34634260 ttatattattgtttacaatgttaatatgttaactttttaaaagatatttcatagtgtccgtaatttaaaaataaaaaatgaaccctcacatcccttcccc 34634359  T
Q  116 tcttaaaccctccatccaaacacacccataat 147  Q
    || ||||| |||||||||||||||||| ||||    
T  34634360 tcctaaactctccatccaaacacacccttaat 34634391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 1281243 - 1281372
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa- 99  Q
    |||||||| ||||||||||||||||| |||||| ||||||||||||| ||||||||||| | |||||||| |||| |||||||||||||||||| | ||     
T  1281243 caagtgtggttgaagtattatattatcgtttattatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaactaaat 1281342  T
Q  100 -cccccctccctttccctcttaaaccctcc 128  Q
     | |||||||||| |  |||||||||||||    
T  1281343 cctcccctcccttcctatcttaaaccctcc 1281372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 31738524 - 31738666
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||| ||| || |||| | |||| ||| |||| |||||||||||||||||  | ||||    
T  31738524 aagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagtgtccgtaatttaaaaatgaaatttaaacc 31738623  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      |||||  ||| ||||| ||||||||||||||||||||||||    
T  31738624 ctcccctttcttcccctcctaaaccctccatccaaacacaccc 31738666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 7503097 - 7503004
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaag 95  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||| | |  |||||||||||||| ||||    
T  7503097 aagtgtgattaaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttcatagttttggtaatttaaaaatggaaag 7503004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 24243190 - 24243051
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtga-ac 100  Q
    |||||||||||||||||||||| ||  |||||||||||| ||| || | |||||||||||||||| ||| |||| ||||||| |||||||||||| |  |    
T  24243190 aagtgtgattgaagtattatatgatcatttatcatgttattat-ttcaatttttaaaagacattttatagtgtc-gtaatttcaaaatgaaaagtaagtc 24243093  T
Q  101 ccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      |||| || ||||||||||||| ||||||||||||||||||    
T  24243092 atcccttcccttccctcttaaactctccatccaaacacaccc 24243051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 1026992 - 1026892
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||| ||||||||||||||||| || |||||||||||||||||||| |||||| | || | |||||||| |||| | |||||||||||||||||| ||||    
T  1026992 aagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttgataaaatatttcatagtgtccgcaatttaaaaatgaaaagtaaacc 1026893  T
Q  102 c 102  Q
    |    
T  1026892 c 1026892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 6315163 - 6315255
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    |||||||||||||||||||||  || |||||||| ||||||||||| | ||||| ||| |||||||||| |||| ||| ||||||||||||||    
T  6315163 aagtgtgattgaagtattatacgatcgtttatcaagttaatatgttaatttttttaaaaacatttcatagtgtccgtattttaaaaatgaaaa 6315255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 30664462 - 30664554
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    |||||||||||||||||||||| |  ||||||||| |||||||||| ||||||||||| | ||||  || |||| ||||||||||| ||||||    
T  30664462 aagtgtgattgaagtattatataaccgtttatcatattaatatgttaactttttaaaaaatattttgtaatgtccgtaatttaaaactgaaaa 30664554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 37032480 - 37032623
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaa--tttaaaaatgaaaagtgaa 99  Q
    |||||||||| ||||||||||| || ||||||||| |||||||||| ||||||||||| ||| ||| || |||| ||||  ||| ||||  |||||| ||    
T  37032480 aagtgtgattaaagtattatatgatagtttatcatcttaatatgttaactttttaaaaaacacttcctagtgtccgtaattttttaaaaaaaaaagtaaa 37032579  T
Q  100 ccc-ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||  ||  |||||| ||| ||||||||| ||||||||||||||    
T  37032580 cccttcccacctttctctcctaaaccctcaatccaaacacaccc 37032623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 28083843 - 28083934
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaa 93  Q
    ||||||||||| |||||||||| ||||||||||||||| | ||||| ||| ||||||| |||| ||||| | || |||||||||||| ||||    
T  28083843 aagtgtgattggagtattatatgattgtttatcatgttgacatgttaactctttaaaaaacatatcatagtatccgtaatttaaaaaagaaa 28083934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 29358482 - 29358384
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||  || |||||| ||||||||||||| | ||||||||| | |||| ||| |||| ||||||||||||| |||||| ||||    
T  29358482 aagtgtgattgaagtattataggatcgtttataatgttaatatgtt-aatttttaaaaaatattttatagtgtccgtaatttaaaaataaaaagtaaacc 29358384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 43732848 - 43732930
Alignment:
Q  62 catttcatactgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||| ||| |||| |||||||||||| ||||||| |||||  ||||||||| ||||| ||||||||||||||||||||||||    
T  43732848 cattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccc 43732930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 41103649 - 41103505
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaa--tttaaaaatgaaaagtgaa 99  Q
    |||||||||||||||||||||| || ||||||||||||| | | || | ||||| ||| || ||||||| ||||  |||  |||||||| |||||   ||    
T  41103649 aagtgtgattgaagtattatatgatcgtttatcatgttattgttttaatttttttaaaaacgtttcatagtgtccataatttttaaaaacgaaaatcaaa 41103550  T
Q  100 cc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||  |||||| ||| ||||| ||||||||||||||||||||||||    
T  41103549 ccctcccctctcttcccctcctaaaccctccatccaaacacaccc 41103505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2248552 - 2248653
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    |||||||||||| | |||||||| |  |||||  ||||||||| ||| |||||| |||| | |||||||| |||| ||||||||||||| ||||||||||    
T  2248552 caagtgtgattggaatattatatgaccgtttacgatgttaataagttaacttttaaaaaaatatttcatagtgtccgtaatttaaaaataaaaagtgaac 2248651  T
Q  101 cc 102  Q
    ||    
T  2248652 cc 2248653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 7979248 - 7979335
Alignment:
Q  9 attgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    ||||||||||||||| ||| ||||||||||||||| ||| |  |||||| | ||||||||   |||| ||||||||||||||||||||    
T  7979248 attgaagtattatatgattatttatcatgttaataagttaaacttttaataaacatttcacggtgtccgtaatttaaaaatgaaaagt 7979335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 40990327 - 40990182
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgacttttt--aaaagacatttcatactgtctgt-aatttaaaaatgaaaagtga 98  Q
    |||| ||||||||||||||||| || | |||||||||||||||||| ||| |||  |||| |||||||||| ||||| | |||| ||||||||||  | |    
T  40990327 aagtctgattgaagtattatatgatcgcttatcatgttaatatgttaactctttaaaaaaaacatttcatagtgtctataaattaaaaaatgaaatataa 40990228  T
Q  99 acc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||  ||||||| ||   |||  |||||||||||||||||||||||    
T  40990227 accctcccctcctttcttctcccaaaccctccatccaaacacaccc 40990182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 3726965 - 3726864
Alignment:
Q  43 atgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacccccct--ccctttccctcttaaaccctccatccaaacacac 140  Q
    ||||| ||| ||||||| ||||| |||  |||| |||||||||||||||||| | ||||  |||  ||||| ||||| ||||||||||||||||||||||    
T  3726965 atgttaactatttaaaaaacattccatggtgtccgtaatttaaaaatgaaaaataaaccgtcctttcccttcccctcctaaaccctccatccaaacacac 3726866  T
Q  141 cc 142  Q
    ||    
T  3726865 cc 3726864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 29691065 - 29690971
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    ||||||||||||||||| |||| || |||||||||||||||||||| ||||||| ||| | ||||| || | || |||  ||| |||||||||||    
T  29691065 aagtgtgattgaagtatcatatgatcgtttatcatgttaatatgttaacttttttaaaaatatttcctagtatcagtatgttataaatgaaaagt 29690971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 37923221 - 37923127
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    ||||| |||| || |||||||| ||  |||||||||||||||| || ||| ||||||| |||||||||| |||   |||||||||||||||||||    
T  37923221 aagtgcgattaaaatattatatgatcatttatcatgttaatattttaactctttaaaaaacatttcatagtgttcataatttaaaaatgaaaagt 37923127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 8815317 - 8815384
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||||| ||||||||||||  ||||||||  ||||| ||||||||| ||||||||||||||    
T  8815317 gtaatttaaaaattaaaagtgaaccctcccctccctccccctcctaaaccctcaatccaaacacaccc 8815384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 11033520 - 11033659
Alignment:
Q  4 gtgtgattgaagtattatattattgtttatcatgttaatatgttgacttttt-aaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc- 101  Q
    |||||||||||  ||||||| || |||||||||||||||||||| | ||||| |||| |||||||||| | |   |||||||||| |||||||| || |     
T  11033520 gtgtgattgaataattatatgatcgtttatcatgttaatatgttaattttttaaaaaaacatttcataatattcataatttaaaattgaaaagtaaatct 11033619  T
Q  102 -cccctccctttccctcttaaaccctccatccaaacacac 140  Q
     | ||||||||  |||| ||||||||||||| ||| ||||    
T  11033620 tctcctcccttctcctcctaaaccctccatctaaagacac 11033659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 33922626 - 33922678
Alignment:
Q  7 tgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaa 59  Q
    |||||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  33922626 tgattgaagtatgatatgattgtttatcatgataatatgttaactttttaaaa 33922678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 42650479 - 42650408
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgt-ta--atatgttgactttttaaaagacatttcata 70  Q
    |||||||||||||||||||||| |||||||||||||| ||  ||||||| |||||||| || ||||||||||    
T  42650479 aagtgtgattgaagtattatatgattgtttatcatgtataacatatgttaactttttataaaacatttcata 42650408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 30365291 - 30365373
Alignment:
Q  62 catttcatactgtctgtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||| ||||||||||||||||| ||||||  | ||  |||||||||| ||||  |||| |||||||||||||||||||    
T  30365291 catttcataatgtctgtaatttaaaaaagaaaaggaagccctcccctcccttacccttctaaatcctccatccaaacacaccc 30365373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 11033482 - 11033420
Alignment:
Q  80 atttaaaaatgaaaagtgaacccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||| ||||||| |||||||||||||| | ||  ||||||||| ||||||||||||||    
T  11033482 atttaaaaaagaaaagtaaacccccctcccttcctcttctaaaccctcaatccaaacacaccc 11033420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 7394637 - 7394701
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacaca 139  Q
    ||||||||||||  |||||||||||  |||||||||| ||||| ||||||||| |||||||||||    
T  7394637 gtaatttaaaaaataaaagtgaaccatcccctcccttcccctcctaaaccctcaatccaaacaca 7394701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 34196470 - 34196550
Alignment:
Q  62 catttcatactgtctgtaatttaaaaatgaaaagtgaaccc-ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||| ||| ||||||||||||||||| ||||||| | ||| ||| ||||| ||||| |||||||||||||||||| |||||    
T  34196470 cattttataatgtctgtaatttaaaaa-gaaaagtaagccctcccccccttcccctcctaaaccctccatccaaacgcaccc 34196550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 1027024 - 1027091
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| |||||||||||||  ||||||||| || || ||||||||  ||||||||||||||    
T  1027024 gtaatttaaaaaagaaaagtgaacccttccctcccttcccttcctaaacccttaatccaaacacaccc 1027091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 4247660 - 4247562
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||| ||||| ||||||||||| || |||||||||| ||||||||| |||| |||||| | |||| | | || | ||||||||||||| |||||| ||||    
T  4247660 aagtatgatttaagtattatatgatcgtttatcatgctaatatgttaacttcttaaaaaatattttaaagtg-ccgtaatttaaaaataaaaagtaaacc 4247562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 142
Target Start/End: Original strand, 31543249 - 31543315
Alignment:
Q  78 taatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||| ||||||| ||||  |||||||||| ||||| ||||||||| ||| ||||||||||    
T  31543249 taatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatcgaaacacaccc 31543315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 12022293 - 12022386
Alignment:
Q  51 tttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||| |||| |||||| | | |||| ||||||||||||  |||||||| |||  |||||| || ||||| ||||||||| ||||||||||||||    
T  12022293 ttttaaaaaaacattttacattgtccgtaatttaaaaaataaaagtgagccctcccctcctttcccctcctaaaccctcaatccaaacacaccc 12022386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 16024315 - 16024394
Alignment:
Q  62 catttcatactgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacac 140  Q
    ||||| ||| |||| |||||||||||| ||||||| ||| |  ||||||||| ||||| |||| |||||||||||||||||    
T  16024315 cattttataatgtccgtaatttaaaaa-gaaaagtaaactctcccctcccttcccctcctaaatcctccatccaaacacac 16024394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 30365198 - 30365131
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||||| |||||||||| |  |||||| ||  |||| ||||||||| ||||||||||||||    
T  30365198 gtaatttaaaaattaaaagtgaactctcccctcctttctcctcctaaaccctcaatccaaacacaccc 30365131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 38198199 - 38198243
Alignment:
Q  52 ttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    |||||||| ||| || ||| |||||||||||||||||||||||||    
T  38198199 ttttaaaaaacactttatagtgtctgtaatttaaaaatgaaaagt 38198243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 5e-38; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 37606998 - 37607137
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--c 102  Q
    ||||||||||||||||||| || |||||||||||||||||||| |||||||| || |||||||||| | |||||| |||||||||||||||| ||||  |    
T  37606998 tgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtatctgtattttaaaaatgaaaagtaaaccatc 37607097  T
Q  103 ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      ||||||||||||| ||||||||||||||||||||||||    
T  37607098 atctccctttccctcgtaaaccctccatccaaacacaccc 37607137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 37779207 - 37779346
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--c 102  Q
    ||||||||||||||||||| || |||||||||||||||||||| |||||||| || |||||||||| | |||||| |||||||||||||||| ||||  |    
T  37779207 tgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtatctgtagtttaaaaatgaaaagtaaaccatc 37779306  T
Q  103 ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      ||||||||||||| ||||||||||||||||||||||||    
T  37779307 atctccctttccctcgtaaaccctccatccaaacacaccc 37779346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 7544236 - 7544378
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac 100  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| | ||||||||||| |||||||||| |||| ||||||||||||||||||   |||    
T  7544236 caagtgtgattgaagtattatatgattgtttattatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaaccaaac 7544335  T
Q  101 c--cccctccctttccctcttaaaccctccatccaaacacacc 141  Q
    |  ||||| |||| ||||| |||||||||||||||||||||||    
T  7544336 cctccccttccttcccctcctaaaccctccatccaaacacacc 7544378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 37551510 - 37551648
Alignment:
Q  4 gtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc-- 101  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||||||| || |||||||  | |||||||| |||||||||||||||| ||||      
T  37551510 gtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttc--agtgtctgtagtttaaaaatgaaaagtaaaccat 37551607  T
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    || ||||||||||||| ||||||||||||||||||||||||    
T  37551608 cctctccctttccctcgtaaaccctccatccaaacacaccc 37551648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 37654340 - 37654478
Alignment:
Q  4 gtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc-- 101  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||||||| || |||||||  | |||||||| |||||||||||||||| ||||      
T  37654340 gtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttc--agtgtctgtagtttaaaaatgaaaagtaaaccat 37654437  T
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    || ||||||||||||| ||||||||||||||||||||||||    
T  37654438 cctctccctttccctcgtaaaccctccatccaaacacaccc 37654478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 13634814 - 13634954
Alignment:
Q  4 gtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc-- 101  Q
    ||||||||||| |||||||| || |||||||||||||||||||| ||||||||||| |||||||||| |||  |||||||||||||||||||| | ||      
T  13634814 gtgtgattgaattattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgttcgtaatttaaaaatgaaaagtaacccct 13634913  T
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||| ||||| ||||||||| ||||||||||||||    
T  13634914 cccctcccttcccctcctaaaccctcaatccaaacacaccc 13634954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 36363132 - 36363271
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa- 99  Q
    ||||||| |||||||| |||||| ||||||||||||| ||||||||| ||||| |||||||||||| ||| | || |||||||||||||||||||||||     
T  36363132 caagtgtcattgaagttttatatcattgtttatcatgctaatatgttaactttctaaaagacattttatagtatccgtaatttaaaaatgaaaagtgaac 36363231  T
Q  100 -cccccctccctttccctcttaaaccctccatccaaacac 138  Q
     | | |||||||| ||||| ||||||||||||||||||||    
T  36363232 tctctcctcccttcccctcctaaaccctccatccaaacac 36363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 26414994 - 26415136
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa-- 99  Q
    ||||||||||||||||||||||  | |||||||||||||||||||| |||||||| || |||||||||| ||||||||| ||||||||||||||| ||      
T  26414994 aagtgtgattgaagtattatatggtcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaacttaaaaatgaaaagtaaact 26415093  T
Q  100 cccccctccctt-tccctcttaaaccctccatccaaacacacc 141  Q
    | ||||||| ||  ||||| |||||||||||||||||||||||    
T  26415094 ctcccctcctttccccctcataaaccctccatccaaacacacc 26415136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 36392293 - 36392194
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| || |||||||||||||||||||| |||||||| || |||||||||| ||||||||||||||||||||||||| ||||    
T  36392293 aagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaatttaaaaatgaaaagtaaacc 36392194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 8502978 - 8502836
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||| | ||||| |||||| ||||| |||| ||||||||||| | |||||||| |||| |||||||||||||||||||||||||    
T  8502978 aagtgtgattgaagtattatgtaattgtgtatcatattaatttgttaactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaagtgaacc 8502879  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      ||| ||| || || || |||||| |||||||||||||||||    
T  8502878 ctcccatccattcccttcataaaccatccatccaaacacaccc 8502836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 16938580 - 16938722
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    ||||||||||||| |||||||| ||  ||||||||||||| ||||| ||| ||||||| |||||||||| |||| |||||||||||||||||  | ||||    
T  16938580 aagtgtgattgaaatattatatgatcatttatcatgttaacatgttaactctttaaaaaacatttcatagtgtcagtaatttaaaaatgaaatctaaacc 16938679  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      ||||||| || | ||| ||||||||||||||||||||||||    
T  16938680 ctcccctccattcctctcctaaaccctccatccaaacacaccc 16938722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 28279619 - 28279525
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||| |||||||||| ||||  |||||||||||||||||||    
T  28279619 aagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcataatgtccataatttaaaaatgaaaagt 28279525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 9856980 - 9857072
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaa 93  Q
    ||||||||||||||||||||||| || |||||| ||||||||||||| ||||||||||| |||||||||| |||| |||| ||||||||||||    
T  9856980 caagtgtgattgaagtattatatgatcgtttattatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaacttaaaaatgaaa 9857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 9798752 - 9798615
Alignment:
Q  5 tgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa--ccc 102  Q
    ||||||||||||||||||| || |||| ||||||||| || |||||||||||||| ||||||| || | || |||||||||||||||||||| ||  | |    
T  9798752 tgtgattgaagtattatatgatcgtttttcatgttaaaatattgactttttaaaaaacatttcgtagtatccgtaatttaaaaatgaaaagtaaactctc 9798653  T
Q  103 ccctccctttccctcttaaaccctccatccaaacacac 140  Q
     | ||||||| |||| |||| |||||||||||||||||    
T  9798652 acatcccttttcctcctaaatcctccatccaaacacac 9798615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 141
Target Start/End: Original strand, 1657955 - 1658055
Alignment:
Q  43 atgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacac 140  Q
    ||||| ||||||||||| |||||| ||| |||| |||||||||||||||||||| ||||  |||||||||| ||||| ||||||||||||||||||||||    
T  1657955 atgttaactttttaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacac 1658054  T
Q  141 c 141  Q
    |    
T  1658055 c 1658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 14245204 - 14245089
Alignment:
Q  29 tttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaa--cccccctccctttccctcttaaaccct 126  Q
    ||||||||||||||||||| ||||| ||||| |||||||| | |||| |||||||||||| ||||||| ||  | |||||||||| ||||| ||||||||    
T  14245204 tttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccct 14245105  T
Q  127 ccatccaaacacaccc 142  Q
    | ||||||||||||||    
T  14245104 caatccaaacacaccc 14245089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 20147009 - 20146917
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    ||||||||||||| |||||||| || | |||||||||||||||||| ||||||||||| |||||||||| || | ||||||||||||||||||    
T  20147009 aagtgtgattgaaatattatatgatcgcttatcatgttaatatgttaactttttaaaaaacatttcatagtgaccgtaatttaaaaatgaaaa 20146917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 20513592 - 20513494
Alignment:
Q  2 aagtgtgattgaagtattatatt----attgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    ||||||||||||||||||||||     || |||||||||| ||||||||| ||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  20513592 aagtgtgattgaagtattatatatatgatcgtttatcatgataatatgttaactttttaaaaaacatttcatagtgtctgtagtttaaaaatgaaaagt 20513494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 17024361 - 17024273
Alignment:
Q  8 gattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    |||||||||||||||| || |||| ||||||||||||| | ||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  17024361 gattgaagtattatatgatcgtttttcatgttaatatgataactttttaaagaacatttcataatgtctgcaatttaaaaatgaaaagt 17024273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 10476129 - 10476271
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtga--a 99  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||   ||||| | | | |||||||| ||   ||||||||||||| | |||| |  |    
T  10476129 aagtgtgattgaagtattatataatcgtttatcatcttaatatgtttttttttttataaatatttcatagtggtcgtaatttaaaaattataagtaaaca 10476228  T
Q  100 cccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    | |||||||||| ||||| ||||||||||||||||||||||||    
T  10476229 ctcccctcccttcccctcctaaaccctccatccaaacacaccc 10476271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 16501934 - 16501841
Alignment:
Q  1 caagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    ||||||||||| |||| |||||| ||  ||||| ||||||||||||| |||||| |||| |||||||||| |||| ||||||||||||||||||    
T  16501934 caagtgtgattaaagttttatatgatcatttattatgttaatatgttaacttttaaaaaaacatttcataatgtccgtaatttaaaaatgaaaa 16501841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 10072790 - 10072653
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||| ||||||||||||||||| || |||||||||||||||||||| ||||||||||| | |||||||| |      |||||||| ||||||||| ||||    
T  10072790 aagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatatttcatagtactcacaatttaaatatgaaaagtaaacc 10072691  T
Q  102 cccctccctttccctcttaaaccctccatccaaacacacccataat 147  Q
    |        | |||||||||||||||||||||||||||||| ||||    
T  10072690 c--------tcccctcttaaaccctccatccaaacacacccttaat 10072653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 4373709 - 4373615
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    ||||||||||||| |||||||| ||  ||||||||||||||||||| |||||| |||| | |||||| | |||| ||||||||||||| ||||||    
T  4373709 aagtgtgattgaaatattatatgatcatttatcatgttaatatgttaacttttaaaaaaatatttcacagtgtccgtaatttaaaaattaaaagt 4373615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 2550493 - 2550395
Alignment:
Q  4 gtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaaga-catttcatactgtctgtaatttaaaaatgaaaagtgaaccc 102  Q
    |||||||||||||||||||| |||||||||||||| | ||| || | | ||||||| | ||| ||||| ||||||||||||||||||||||||| |||||    
T  2550493 gtgtgattgaagtattatatgattgtttatcatgt-attattttaattgtttaaaaaaacatatcatagtgtctgtaatttaaaaatgaaaagtaaaccc 2550395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 11757074 - 11757144
Alignment:
Q  72 tgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacac 140  Q
    |||| |||||||||||||||||  | |||||  ||||||||| ||||||||||||||||||||||||||||    
T  11757074 tgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 29002344 - 29002249
Alignment:
Q  7 tgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaaccc 102  Q
    |||||| |||||||||| || |||||||||||||||||||||  |||  |||| |||||| ||| |||   ||||||||||||||||||| |||||    
T  29002344 tgattgtagtattatatgatcgtttatcatgttaatatgttgtttttaaaaaaaacattttatagtgttcataatttaaaaatgaaaagtaaaccc 29002249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 22023483 - 22023602
Alignment:
Q  17 attatattattgtttatcatgttaatatgttgac-tttttaaaagacatttcat-actgtctgtaatttaaaaatgaaaagtgaacccccctccctttcc 114  Q
    ||||||| || |||||||||||||||||||| || ||||||||| ||||||||| | | || |||||||| ||||||||||| |||||        | ||    
T  22023483 attatatgatcgtttatcatgttaatatgttaacttttttaaaaaacatttcataaatatccgtaatttataaatgaaaagtaaaccc--------tccc 22023574  T
Q  115 ctcttaaaccctccatccaaacacaccc 142  Q
    ||| ||||||||||||||||||||||||    
T  22023575 ctcctaaaccctccatccaaacacaccc 22023602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 14245206 - 14245289
Alignment:
Q  61 acatttcatactgtctgtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||| | |||| ||||||||||||||||||   |||||  ||||||||| ||||| ||||||||| ||||||||||||||    
T  14245206 acatttcacagtgtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 14245289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 20147051 - 20147118
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaacccccctccctttccctcttaaaccctccatccaaacacacccataat 147  Q
    |||||||||||||||||||| |||||   |||||| ||||| ||||||||| |||||||||||||| ||||    
T  20147051 gtaatttaaaaatgaaaagtaaaccc---tcccttcccctcctaaaccctcaatccaaacacacccttaat 20147118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 148
Target Start/End: Complemental strand, 11419302 - 11419187
Alignment:
Q  35 atgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacccccctccct-ttccc-tcttaaaccctccatcc 132  Q
    ||||||||||||| ||||||| ||| |||||| ||| ||||  |||||| |||||||||||| ||| | |||| || ||||| || ||||||||||||      
T  11419302 atgttaatatgtttacttttttaaaaacattttatattgtccttaatttgaaaatgaaaagtaaactctcctctctcttcccttcataaaccctccatgt 11419203  T
Q  133 aaacacacccataatt 148  Q
    |||||||||| |||||    
T  11419202 aaacacacccttaatt 11419187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 13839864 - 13839777
Alignment:
Q  9 attgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    ||||||||||||||| ||||| |||||||||| ||| |  |||||| |||| |||||| ||| ||||  ||||||||||| |||||||    
T  13839864 attgaagtattatatgattgtctatcatgttattatttcaacttttcaaaatacattttatagtgtccataatttaaaaaagaaaagt 13839777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 34980878 - 34980812
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacacc 141  Q
    ||||||||||||| ||||||||||||  ||||||||| ||||| |||||| || |||||||||||||    
T  34980878 gtaatttaaaaattaaaagtgaacccttccctcccttcccctcctaaaccttcaatccaaacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 13634776 - 13634712
Alignment:
Q  80 atttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||| ||||||| |||||  ||||||||| ||||| ||||||||| ||||||||||||||    
T  13634776 atttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 13634712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 40305747 - 40305671
Alignment:
Q  63 atttcatactgtctgtaatttaaaaatgaaaagtgaacccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||| ||| ||||||||||||||||| ||||| | |    ||||||||| ||||| ||||||||||||||||||||||||    
T  40305747 attttataatgtctgtaatttaaaaaagaaaactaa---gccctcccttcccctcctaaaccctccatccaaacacaccc 40305671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 26414961 - 26414894
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||| ||||||| |||||  |||||||||  |||| ||||||||| ||||||||||||||    
T  26414961 gtaatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaacacaccc 26414894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 10204670 - 10204577
Alignment:
Q  51 tttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaaccccc--ctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||| ||||||||||| | | |||  ||||||||||||  |||||||| ||| |  ||||||| ||||| ||||||||| ||||||||||||||    
T  10204670 ttttaaaaagacattttacattgttggtaatttaaaaaataaaagtgagccctcacctcccttcccctcctaaaccctcgatccaaacacaccc 10204577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 10650513 - 10650429
Alignment:
Q  61 acatttcatactgtctgtaatttaaaaatgaaaagtgaa--cccccctcccttt--ccctcttaaaccctccatccaaacacacc 141  Q
    |||||||||| |||| ||||||||||||| |||||| ||  | |||||||||||  ||||| |||| ||||||||||||| ||||    
T  10650513 acatttcatagtgtccgtaatttaaaaataaaaagtaaatcctcccctcccttttcccctcctaaatcctccatccaaacgcacc 10650429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 10650544 - 10650657
Alignment:
Q  31 tatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac--ccccctccctttccctcttaaaccctcc 128  Q
    ||||||| ||||||||| |||||||| || |||||||||| | || ||||||||||||  |||||| |||   | |||||||| |||||  ||||  ||     
T  10650544 tatcatggtaatatgttaactttttataaaacatttcatagtatccgtaatttaaaaacaaaaagtaaactttctcctcccttcccctcccaaactttca 10650643  T
Q  129 atccaaacacaccc 142  Q
    ||||||||||||||    
T  10650644 atccaaacacaccc 10650657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 15986774 - 15986867
Alignment:
Q  51 tttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacccccctc--cctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||| ||||||||||| | | |||  ||||||||||||  |||||||| ||| ||||  |||| ||||| ||||||||| ||||||||||||||    
T  15986774 ttttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcctcttccttcccctcctaaaccctcaatccaaacacaccc 15986867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 21581150 - 21581188
Alignment:
Q  102 cccctccctttccctcttaaaccctccatccaaacacac 140  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  21581150 cccctcccttcccctcctaaaccctccatccaaacacac 21581188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 142
Target Start/End: Original strand, 2184028 - 2184057
Alignment:
Q  113 ccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||||||||||||||||||||||    
T  2184028 ccctcttaaaccctccatccaaacacaccc 2184057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 32727918 - 32727833
Alignment:
Q  4 gtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaat 89  Q
    ||||| ||||| ||||| || || ||||||||||||||||||||   ||||||||| | |||||||| |  | |||||||||||||    
T  32727918 gtgtggttgaattattacatgatcgtttatcatgttaatatgttcgttttttaaaaaatatttcataatacccgtaatttaaaaat 32727833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 43535 - 43603
Alignment:
Q  29 tttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaa-tttaaaaatgaaaagt 96  Q
    ||||| ||||||||||||| |||||| |||| | |||||||| |||  |||| ||||||||||||||||    
T  43535 tttattatgttaatatgttaacttttcaaaaaatatttcatagtgttcgtaattttaaaaatgaaaagt 43603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 2550533 - 2550592
Alignment:
Q  82 ttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacaca 139  Q
    ||||||| ||||||| |||||  ||||||||| ||||| ||||||||| |||||||||||    
T  2550533 ttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 16501994 - 16502034
Alignment:
Q  101 ccccctccctttccctcttaaaccctccatccaaacacacc 141  Q
    ||||||| ||||||||| ||||||||| |||||||||||||    
T  16501994 ccccctctctttccctcctaaaccctcaatccaaacacacc 16502034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 16938520 - 16938480
Alignment:
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||| ||||| ||||||||| ||||||||||||||    
T  16938520 cccctcccttcccctcctaaaccctcaatccaaacacaccc 16938480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 34981013 - 34981053
Alignment:
Q  102 cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||| ||||||||||||||||||  ||||||||||    
T  34981013 cccctcccttcccctcttaaaccctccattaaaacacaccc 34981053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 40815397 - 40815433
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgt 38  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  40815397 aagtgtgattgaaatattatataattgtttatcatgt 40815433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 16439 - 16297
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || |||||||||| |||   ||||||||||||||||||| ||||    
T  16439 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaacgttttataaaacatttcatagtgttcataatttaaaaatgaaaagtaaacc 16340  T
Q  102 --cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
      ||||||| |||||||| ||||||||||||||||||| ||||    
T  16339 ctcccctccttttccctcctaaaccctccatccaaacaaaccc 16297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 39320 - 39187
Alignment:
Q  12 gaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaac---ccccctcc 108  Q
    |||||||||||| ||  ||||||||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||| |||   |||||||     
T  39320 gaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctccccctca 39221  T
Q  109 ctttccctcttaaaccctccatccaaacacaccc 142  Q
     || ||||| ||||||||||||||||||||||||    
T  39220 tttcccctcctaaaccctccatccaaacacaccc 39187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 39366 - 39438
Alignment:
Q  77 gtaatttaaaaatgaaaagtgaaccc--ccctccctttccctcttaaaccctccatccaaacacacccataat 147  Q
    |||||||||||| ||||||| |||||  ||||||||||||||  ||||||||| |||||||||||||| ||||    
T  39366 gtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacacccttaat 39438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 15364 - 15504
Alignment:
Q  2 aagtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    ||||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||| ||| |||||| |||| ||||||||||||| ||||||  | |    
T  15364 aagtgtggttgaagtattatatgattgtttatcacgttaatatgttgaccttttaaaaaaca-ttcatagtgtccgtaatttaaaaataaaaagtagatc 15462  T
Q  102 ccc--ctccctttccctcttaaaccctccatccaaacacacc 141  Q
    | |   |||||| || || |||||||||||||||||||||||    
T  15463 ctcatttcccttcccttcctaaaccctccatccaaacacacc 15504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 16053 - 16143
Alignment:
Q  4 gtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaa 94  Q
    |||||||||||||||| ||| ||||||| |||| |||||||||| ||||||||||| |||||||||| | || ||||||||||||||||||    
T  16053 gtgtgattgaagtattttataattgtttttcatattaatatgttaactttttaaaaaacatttcataatatccgtaatttaaaaatgaaaa 16143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 17715 - 17781
Alignment:
Q  76 tgtaatttaaaaatgaaaagtgaacccccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    ||||||||||||| ||||||| |||||||||||||| | ||| ||||||||||||||||||||||||    
T  17715 tgtaatttaaaaaagaaaagtaaacccccctcccttccactcctaaaccctccatccaaacacaccc 17781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 3231 - 3150
Alignment:
Q  61 acatttcatactgtctgtaatttaaaaatgaaaagtgaa--cccccctccctttccctcttaaaccctccatccaaacacac 140  Q
    |||||||||| ||||||||||||||||| ||||||| ||  | |||||||||| ||||| ||||| ||| ||||||||||||    
T  3231 acatttcatagtgtctgtaatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 1290 - 1372
Alignment:
Q  19 tatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc 101  Q
    ||||| || ||||||||||  |||||||| ||||||||||| |||||||||| |||   ||||||||||||||||||| ||||    
T  1290 tatatgatcgtttatcatgacaatatgttaactttttaaaaaacatttcatagtgttcataatttaaaaatgaaaagtaaacc 1372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 6686 - 6778
Alignment:
Q  3 agtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagt 96  Q
    ||||||||||||||||||||| || |||||| |||||||||| || | ||||| ||| | |||||||| |||  |||||||||||| |||||||    
T  6686 agtgtgattgaagtattatatgatcgtttat-atgttaatattttaatttttttaaaaatatttcatagtgtgcgtaatttaaaaacgaaaagt 6778  T

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Target: scaffold0096; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 6656 - 6585
Alignment:
Q  73 gtctgtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacacaccc 142  Q
    |||||||||||||||| ||||||| ||||  ||||||||||  |||| |||| | || ||||||||||||||    
T  6656 gtctgtaatttaaaaaagaaaagtaaaccctcccctcccttctcctcctaaaacttcaatccaaacacaccc 6585  T

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Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 242366 - 242456
Alignment:
Q  51 tttttaaaagacatttcatactgtctgtaatttaaaaatgaaaagtgaacc--cccctccctttccctcttaaaccctccatccaaacaca 139  Q
    |||||||||  ||||| ||| |||| |||||||||||| ||||||| ||||  |||||||||| ||||  |||||| ||||||||||||||    
T  242366 tttttaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttccccttataaaccatccatccaaacaca 242456  T

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Target: scaffold0012 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 184784 - 184847
Alignment:
Q  78 taatttaaaaatgaaaagtgaacccccc--tccctttccctcttaaaccctccatccaaacaca 139  Q
    ||||||||||| ||| ||| ||||| ||  |||||||||||| |||||||||||||||||||||    
T  184784 taatttaaaaaagaatagtaaaccctcccttccctttccctcctaaaccctccatccaaacaca 184847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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