View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0867_high_24 (Length: 268)
Name: NF0867_high_24
Description: NF0867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0867_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 54635294 - 54635055
Alignment:
| Q |
1 |
acaacacattgtgttgaccaagtgaaagccaactttcactagaccttaaaaagtggtgaatgagctccattttaagcacaggacaaccttcataatgcct |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54635294 |
acaacacattgtgttgaccaagtgaaagccaactttcactagaccttaaaaagtggtgaatgagctccattttaagcacaggacaaccttcataatgcct |
54635195 |
T |
|
| Q |
101 |
aggataatccattatagtaatgtcatactcagatattatatttgccatcaaactcttggtctcttcctcgcgaaaattgaaaaccaaaatagaagcatca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
54635194 |
aggataatccattatagtaatgtcatactcagatattatatttgccatcaaactcttggtctcttcctcgcgaaaattgaaaaccaaaatagaagcatca |
54635095 |
T |
|
| Q |
201 |
ggcacattctctctaagctgacctactataccatccatat |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
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| T |
54635094 |
ggcacattctctctaagctgacctactataccatccatat |
54635055 |
T |
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