View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0869_high_4 (Length: 338)

Name: NF0869_high_4
Description: NF0869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0869_high_4
NF0869_high_4
[»] chr7 (5 HSPs)
chr7 (29-326)||(20707494-20707792)
chr7 (29-326)||(20875538-20875836)
chr7 (108-278)||(41595380-41595550)
chr7 (29-92)||(41594671-41594734)
chr7 (167-278)||(31420677-31420788)
[»] chr5 (5 HSPs)
chr5 (108-278)||(23122289-23122459)
chr5 (108-278)||(14008231-14008401)
chr5 (29-92)||(14007522-14007585)
chr5 (167-278)||(22271618-22271729)
chr5 (29-92)||(23123110-23123173)
[»] chr2 (4 HSPs)
chr2 (108-278)||(43523986-43524156)
chr2 (167-278)||(5087406-5087517)
chr2 (29-92)||(43523278-43523341)
chr2 (32-84)||(5086643-5086695)
[»] chr3 (5 HSPs)
chr3 (108-274)||(22510896-22511062)
chr3 (29-90)||(22511700-22511761)
chr3 (167-278)||(2735308-2735419)
chr3 (167-278)||(40924354-40924465)
chr3 (134-278)||(22127789-22127933)
[»] chr4 (2 HSPs)
chr4 (108-278)||(50413725-50413895)
chr4 (167-259)||(14798457-14798549)
[»] chr6 (1 HSPs)
chr6 (167-278)||(95980-96091)
[»] scaffold0005 (1 HSPs)
scaffold0005 (167-259)||(41179-41271)
[»] chr1 (1 HSPs)
chr1 (167-246)||(27132127-27132206)


Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 29 - 326
Target Start/End: Original strand, 20707494 - 20707792
Alignment:
Q  29 agacggtttcaagacacttggtttagcaaatttctttcatggctagaatattcaccttcaaagggtgctgcannnnnnnatatcagatatgttacaaaca 128  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| || |||||||       |||||||||||||||||||||    
T  20707494 agacggtttcaagacacttggtttagcatatttctttcatggctagaatatttaccttcaacggatgctgcattttttaatatcagatatgttacaaaca 20707593  T
Q  129 ctacatctttaagtcttacggaaccagtgtatgatgtcctttctcgacataacattgacgtgtctaaccttcacggtcaagggtatgatggtgcaagcaa 228  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20707594 ctacatctttaagtcttacggaaccagtgtatgatgtactttcttgacataacattgaagtgtctaaccttcacgatcaagggtatgatggtgcaagcaa 20707693  T
Q  229 tatgaaataagaatggaacaatttacaagcattgtttatgaaggattgtctctaagcatac-acactcannnnnnngctcatatattacaacttgcctt 326  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||       |||||||||||||||||||||||    
T  20707694 tatgaaagaagaatggaacaatttacaagcgttgtttatgaaggattgtctctaagcatactacactcatttttttgctcatatattacaacttgcctt 20707792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 29 - 326
Target Start/End: Original strand, 20875538 - 20875836
Alignment:
Q  29 agacggtttcaagacacttggtttagcaaatttctttcatggctagaatattcaccttcaaagggtgctgcannnnnnnatatcagatatgttacaaaca 128  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| || |||||||       |||||||||||||||||||||    
T  20875538 agacggtttcaagacacttggtttagcatatttctttcatggctagaatatttaccttcaacggatgctgcattttttaatatcagatatgttacaaaca 20875637  T
Q  129 ctacatctttaagtcttacggaaccagtgtatgatgtcctttctcgacataacattgacgtgtctaaccttcacggtcaagggtatgatggtgcaagcaa 228  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20875638 ctacatctttaagtcttacggaaccagtgtatgatgtactttcttgacataacattgaagtgtctaaccttcacgatcaagggtatgatggtgcaagcaa 20875737  T
Q  229 tatgaaataagaatggaacaatttacaagcattgtttatgaaggattgtctctaagcatac-acactcannnnnnngctcatatattacaacttgcctt 326  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||       |||||||||||||||||||||||    
T  20875738 tatgaaagaagaatggaacaatttacaagcgttgtttatgaaggattgtctctaagcatactacactcatttttttgctcatatattacaacttgcctt 20875836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 108 - 278
Target Start/End: Original strand, 41595380 - 41595550
Alignment:
Q  108 atatcagatatgttacaaacactacatctttaagtcttacggaaccagtgtatgatgtcctttctcgacataacattgacgtgtctaaccttcacggtca 207  Q
    |||| |||| |||||| | |||||||||||||||||||| |||| |||||| |||| | ||||||||||||||| |||| || ||||||||||  |||||    
T  41595380 atatgagatgtgttaccagcactacatctttaagtcttaaggaagcagtgtgtgatatactttctcgacataaccttgatgtttctaaccttcgtggtca 41595479  T
Q  208 agggtatgatggtgcaagcaatatgaaataagaatggaacaatttacaagcattgtttatgaaggattgtc 278  Q
    |||||||||||||||||||||||||| |  ||||||||||  |||||||||||||||||||||||||||||    
T  41595480 agggtatgatggtgcaagcaatatgagaggagaatggaacggtttacaagcattgtttatgaaggattgtc 41595550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 41594671 - 41594734
Alignment:
Q  29 agacggtttcaagacacttggtttagcaaatttctttcatggctagaatattcaccttcaaagg 92  Q
    ||||||||| |||||||||||||||||  ||||| |||||||||||||||||||||||||||||    
T  41594671 agacggtttaaagacacttggtttagcttatttcattcatggctagaatattcaccttcaaagg 41594734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 278
Target Start/End: Original strand, 31420677 - 31420788
Alignment:
Q  167 ctttctcgacataacattgacgtgtctaaccttcacggtcaagggtatgatggtgcaagcaatatgaaataagaatggaacaatttacaagcattgttta 266  Q
    ||||||||||||||| |||| || |||||| |||  |||||||||||||| ||||| |||||||||| |  |||||||||   |||||||||| | ||||    
T  31420677 ctttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttacaagcacttttta 31420776  T
Q  267 tgaaggattgtc 278  Q
    |||| |||||||    
T  31420777 tgaaagattgtc 31420788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 108 - 278
Target Start/End: Complemental strand, 23122459 - 23122289
Alignment:
Q  108 atatcagatatgttacaaacactacatctttaagtcttacggaaccagtgtatgatgtcctttctcgacataacattgacgtgtctaaccttcacggtca 207  Q
    |||| |||| |||||| | |||||||||||||||||||| |||| |||||| |||| | ||||||||||||||| |||| || ||||||||||  |||||    
T  23122459 atatgagatgtgttactagcactacatctttaagtcttaaggaagcagtgtgtgatatactttctcgacataaccttgatgtttctaaccttcgtggtca 23122360  T
Q  208 agggtatgatggtgcaagcaatatgaaataagaatggaacaatttacaagcattgtttatgaaggattgtc 278  Q
    |||||||||||||||||||||||||| |  ||||||||||  |||||||||||||||||||||||||||||    
T  23122359 agggtatgatggtgcaagcaatatgagaggagaatggaacggtttacaagcattgtttatgaaggattgtc 23122289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 108 - 278
Target Start/End: Original strand, 14008231 - 14008401
Alignment:
Q  108 atatcagatatgttacaaacactacatctttaagtcttacggaaccagtgtatgatgtcctttctcgacataacattgacgtgtctaaccttcacggtca 207  Q
    |||| |||| |||||| | |||||||||||||||||||| |||| | |||| |||| | ||||||||||||||| |||| || ||||||||||  |||||    
T  14008231 atatgagatgtgttaccagcactacatctttaagtcttaaggaagcggtgtgtgatatactttctcgacataaccttgatgtttctaaccttcgtggtca 14008330  T
Q  208 agggtatgatggtgcaagcaatatgaaataagaatggaacaatttacaagcattgtttatgaaggattgtc 278  Q
    | |||||||||||||||||||||||| |  ||||||||||  |||||||||||||||||||||||||||||    
T  14008331 atggtatgatggtgcaagcaatatgagaggagaatggaacggtttacaagcattgtttatgaaggattgtc 14008401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 14007522 - 14007585
Alignment:
Q  29 agacggtttcaagacacttggtttagcaaatttctttcatggctagaatattcaccttcaaagg 92  Q
    ||||||||| |||||||||||||||||  ||||| |||||||||||||||||||||||||||||    
T  14007522 agacggtttaaagacacttggtttagcttatttcattcatggctagaatattcaccttcaaagg 14007585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 22271729 - 22271618
Alignment:
Q  167 ctttctcgacataacattgacgtgtctaaccttcacggtcaagggtatgatggtgcaagcaatatgaaataagaatggaacaatttacaagcattgttta 266  Q
    ||||||||||||||| |||| || |||||| |||  |||||||||||||| ||||| |||||||||| |  |||||||||   |||||||||| | ||||    
T  22271729 ctttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttacaagcacttttta 22271630  T
Q  267 tgaaggattgtc 278  Q
    |||| |||||||    
T  22271629 tgaaagattgtc 22271618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 23123173 - 23123110
Alignment:
Q  29 agacggtttcaagacacttggtttagcaaatttctttcatggctagaatattcaccttcaaagg 92  Q
    ||||||||| |||||||||||||||||   |||  |||||||||||||||||||||||||||||    
T  23123173 agacggtttaaagacacttggtttagcttgttttattcatggctagaatattcaccttcaaagg 23123110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 5e-44; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 108 - 278
Target Start/End: Original strand, 43523986 - 43524156
Alignment:
Q  108 atatcagatatgttacaaacactacatctttaagtcttacggaaccagtgtatgatgtcctttctcgacataacattgacgtgtctaaccttcacggtca 207  Q
    |||| |||| |||||| | |||||||||||||||||||| |||| | |||| |||| | ||||||||||||||| |||| || ||||||||||  |||||    
T  43523986 atatgagatgtgttaccagcactacatctttaagtcttaaggaagcggtgtgtgatatactttctcgacataaccttgatgtttctaaccttcgtggtca 43524085  T
Q  208 agggtatgatggtgcaagcaatatgaaataagaatggaacaatttacaagcattgtttatgaaggattgtc 278  Q
    |||||||||||||||||||||||||| |  ||||||||||  |||||||||||||||||||||||||||||    
T  43524086 agggtatgatggtgcaagcaatatgagaggagaatggaacggtttacaagcattgtttatgaaggattgtc 43524156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 278
Target Start/End: Original strand, 5087406 - 5087517
Alignment:
Q  167 ctttctcgacataacattgacgtgtctaaccttcacggtcaagggtatgatggtgcaagcaatatgaaataagaatggaacaatttacaagcattgttta 266  Q
    ||||||||||||||| |||| || |||||| |||  |||||||||||||||||||| |||||||||| |  |||||||||   |||||||||| | ||||    
T  5087406 ctttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgatggtgctagcaatatgagaggagaatggaattgtttacaagcacttttta 5087505  T
Q  267 tgaaggattgtc 278  Q
    |||| |||||||    
T  5087506 tgaaagattgtc 5087517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 43523278 - 43523341
Alignment:
Q  29 agacggtttcaagacacttggtttagcaaatttctttcatggctagaatattcaccttcaaagg 92  Q
    ||||||||| |||| |||||||||| |  ||||| |||||||||||||||||||||||||||||    
T  43523278 agacggtttaaagatacttggtttaacttatttcattcatggctagaatattcaccttcaaagg 43523341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 5086643 - 5086695
Alignment:
Q  32 cggtttcaagacacttggtttagcaaatttctttcatggctagaatattcacc 84  Q
    |||||||||||||||||||| |||   |||| |||||||||||||||||||||    
T  5086643 cggtttcaagacacttggttcagcttgtttccttcatggctagaatattcacc 5086695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 108 - 274
Target Start/End: Complemental strand, 22511062 - 22510896
Alignment:
Q  108 atatcagatatgttacaaacactacatctttaagtcttacggaaccagtgtatgatgtcctttctcgacataacattgacgtgtctaaccttcacggtca 207  Q
    |||| |||| |||||| | |||||||||||||||||||| |||| | |||| |||| | ||||||||||||||| |||| || ||||||||||| |||||    
T  22511062 atatgagatgtgttactagcactacatctttaagtcttaaggaagcggtgtgtgatatactttctcgacataaccttgatgtttctaaccttcatggtca 22510963  T
Q  208 agggtatgatggtgcaagcaatatgaaataagaatggaacaatttacaagcattgtttatgaaggat 274  Q
    ||||||| |||||||||||||||||| |  ||||||||||  |||||||||||||||||||||||||    
T  22510962 agggtataatggtgcaagcaatatgagaggagaatggaacggtttacaagcattgtttatgaaggat 22510896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 22511761 - 22511700
Alignment:
Q  29 agacggtttcaagacacttggtttagcaaatttctttcatggctagaatattcaccttcaaa 90  Q
    ||||||||| |||||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  22511761 agacggtttaaagacacttggtttagcttatttcattcatggctagaatattcaccttcaaa 22511700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 278
Target Start/End: Original strand, 2735308 - 2735419
Alignment:
Q  167 ctttctcgacataacattgacgtgtctaaccttcacggtcaagggtatgatggtgcaagcaatatgaaataagaatggaacaatttacaagcattgttta 266  Q
    ||||||||||||||| |||| || |||||| |||  |||||||||||||| ||||| |||||||||| |  |||||||||   |||||||||| | ||||    
T  2735308 ctttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttacaagcacttttta 2735407  T
Q  267 tgaaggattgtc 278  Q
    |||| |||||||    
T  2735408 tgaaagattgtc 2735419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 278
Target Start/End: Original strand, 40924354 - 40924465
Alignment:
Q  167 ctttctcgacataacattgacgtgtctaaccttcacggtcaagggtatgatggtgcaagcaatatgaaataagaatggaacaatttacaagcattgttta 266  Q
    ||||||||||||||| |||| || |||||| |||  |||||||||||||| ||||| |||||||||| |  |||||||||   |||||||||| | ||||    
T  40924354 ctttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttacaagcacttttta 40924453  T
Q  267 tgaaggattgtc 278  Q
    |||| |||||||    
T  40924454 tgaaagattgtc 40924465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 278
Target Start/End: Complemental strand, 22127933 - 22127789
Alignment:
Q  134 tctttaagtcttacggaaccagtgtatgatgtcctttctcgacataacattgacgtgtctaaccttcacggtcaagggtatgatggtgcaagcaatatga 233  Q
    ||||||| ||||| |||| |||| | || | | |||| |||||||||| ||||||| |||||| ||   |||||||||||||| ||||| ||||||||||    
T  22127933 tctttaactcttaaggaagcagtatgtggtatactttttcgacataactttgacgtttctaacatttgtggtcaagggtatgacggtgctagcaatatga 22127834  T
Q  234 aataagaatggaacaatttacaagcattgtttatgaaggattgtc 278  Q
     |  |||||||||   |||||||||| | |||||||| |||||||    
T  22127833 gaggagaatggaatggtttacaagcactatttatgaaagattgtc 22127789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 108 - 278
Target Start/End: Original strand, 50413725 - 50413895
Alignment:
Q  108 atatcagatatgttacaaacactacatctttaagtcttacggaaccagtgtatgatgtcctttctcgacataacattgacgtgtctaaccttcacggtca 207  Q
    |||| |||||||||||||||||||||||||||| ||||| |||| |||||| |||| | |||||||||| |||| |||| ||||||||||||| ||||||    
T  50413725 atatgagatatgttacaaacactacatctttaactcttaaggaagcagtgtgtgatatgctttctcgacgtaaccttgatgtgtctaaccttcgcggtca 50413824  T
Q  208 agggtatgatggtgcaagcaatatgaaataagaatggaacaatttacaagcattgtttatgaaggattgtc 278  Q
    ||||| ||||| | ||||||||| || |  |||||||||   || | ||||||||||||| ||||||||||    
T  50413825 agggtgtgatgatacaagcaatacgagaggagaatggaatggttaataagcattgtttattaaggattgtc 50413895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 259
Target Start/End: Complemental strand, 14798549 - 14798457
Alignment:
Q  167 ctttctcgacataacattgacgtgtctaaccttcacggtcaagggtatgatggtgcaagcaatatgaaataagaatggaacaatttacaagca 259  Q
    ||||||||||||||| |||| || |||||| |||  |||||||||||||| ||||| |||||||||| |  |||||||||   ||||||||||    
T  14798549 ctttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttacaagca 14798457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 278
Target Start/End: Original strand, 95980 - 96091
Alignment:
Q  167 ctttctcgacataacattgacgtgtctaaccttcacggtcaagggtatgatggtgcaagcaatatgaaataagaatggaacaatttacaagcattgttta 266  Q
    ||||||||||||||| |||| || |||||| |||  |||||||||||||| ||||| |||||||||| |  |||||||||   |||||||||| | ||||    
T  95980 ctttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttacaagcacttttta 96079  T
Q  267 tgaaggattgtc 278  Q
    |||| |||||||    
T  96080 tgaaagattgtc 96091  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 259
Target Start/End: Original strand, 41179 - 41271
Alignment:
Q  167 ctttctcgacataacattgacgtgtctaaccttcacggtcaagggtatgatggtgcaagcaatatgaaataagaatggaacaatttacaagca 259  Q
    ||||||||||||||| |||| || |||||| |||  |||||||||||||| ||||| |||||||||| |  |||||||||   ||||||||||    
T  41179 ctttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttacaagca 41271  T

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Target: chr1 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 27132127 - 27132206
Alignment:
Q  167 ctttctcgacataacattgacgtgtctaaccttcacggtcaagggtatgatggtgcaagcaatatgaaataagaatggaa 246  Q
    ||||||||||||||| |||| || |||||| |||  |||||||||||||| |||||  ||||||||| |  |||||||||    
T  27132127 ctttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctggcaatatgagaggagaatggaa 27132206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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