View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0872_high_18 (Length: 251)
Name: NF0872_high_18
Description: NF0872
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0872_high_18 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 9 - 251
Target Start/End: Original strand, 35740683 - 35740927
Alignment:
| Q |
9 |
gaataatattacatggtgagctgatcaatgttgataatcttgtttgacctttttgttgatgatagtcataagggaactaacagttcaaattaattaattg |
108 |
Q |
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| T |
35740683 |
gaataatattacatgttgagctgatcaatgttgataatcttgtttgacctttttgttgatgatagtcataagggaactaacagttcaaattaatcaattg |
35740782 |
T |
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| Q |
109 |
catatttagatttgcggaggatttgtgaaaatcatagcaccatgattttctcaaacctatcgtgattacaagaatgc--atatatgtgtactcatattag |
206 |
Q |
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| T |
35740783 |
catatttagatttgcggaggatttgtgaaaatcatagcaccatgattttgtcaaacctatcgtaattacaagaatgcatatatatctgcactcatattag |
35740882 |
T |
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| Q |
207 |
ataatcatatcaccaaatagcgctagagataattggaaaagttca |
251 |
Q |
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| T |
35740883 |
ataatcatatcaccaaatagcgctagagataattagaaaagttca |
35740927 |
T |
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