View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0874_high_27 (Length: 303)
Name: NF0874_high_27
Description: NF0874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0874_high_27 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 76 - 290
Target Start/End: Original strand, 6012199 - 6012413
Alignment:
| Q |
76 |
acatttaatggttgcttttacagggaaagagagtacagaaatgtgttgaaacactggatatactaaagacatctaatgctacaatgaagcatgttgttgt |
175 |
Q |
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| T |
6012199 |
acatttaatggttgcttttacagggaaagagagtacagaaatgtgttgaaacactggatatactaaagacatctaatgctacaatgaagcatgttgttgt |
6012298 |
T |
|
| Q |
176 |
tgcaactaagtgggagaccttttgatcattctccatcctcgacaagtgggaattatttgattgaatttcctcattcttctccatccatccatccatccct |
275 |
Q |
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| T |
6012299 |
tacaactaagtgggagaccttttgatcattctccatcctcgacaagtgggaattatttgattgaatttcctcattcttctccatccatccatccatccct |
6012398 |
T |
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| Q |
276 |
tccttctttgtattc |
290 |
Q |
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||||||||||||||| |
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| T |
6012399 |
tccttctttgtattc |
6012413 |
T |
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