View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0874_high_45 (Length: 201)
Name: NF0874_high_45
Description: NF0874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0874_high_45 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 64; Significance: 3e-28; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38299399 - 38299462
Alignment:
| Q |
1 |
ccagattctcatttacatcaccctaaaccattataacaagaaagcgttatgttctacatctgtg |
64 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38299399 |
ccagattctcatttacatcaccctaaaccattataacaagaaagcgttatgttctacatctgtg |
38299462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 3925 times since January 2019
Visitors: 6176