View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0874_low_10 (Length: 507)
Name: NF0874_low_10
Description: NF0874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0874_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 414; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 1 - 422
Target Start/End: Original strand, 43193426 - 43193847
Alignment:
| Q |
1 |
caaatggcgaagcagctaccttgtgacgccgatggtgtttgcatggcgtgtaaaacgaagcctctagaaactgaaacccttcattgtcgaacatgtgcaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43193426 |
caaatggcgaagcagctaccttgtgacgccgatggtgtttgcatggcgtgtaaaacgaagcctctagaaactgaaacccttcattgtcgaacatgtgcaa |
43193525 |
T |
|
| Q |
101 |
ctccatggcatgttccttgtttacctctgattccaacctcaatcctcgattgggaatgctccgattgttctcaacccgtcgccggcgattccgctgctcc |
200 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43193526 |
ctccatggcatgttccttgtttacctctgattccaacctcaatcctcgattgggaatgctccgattgttctcaacccgtcgccggcgattccgctgctcc |
43193625 |
T |
|
| Q |
201 |
gtctgttgccggagatctcgtttccgctattcgcgccattgagaacgatgtttcgcttaccgatgatgaaaaagcgaagaaacgacaagaactcgttggt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43193626 |
gtctgttgccggagatctcgtttccgctattcgcgccattgagaacgatgtttcgcttaccgatgatgaaaaagcgaagaaacgacaagaactcgttggt |
43193725 |
T |
|
| Q |
301 |
gggacttctaattcacctgctgaaacaaacaatagacgcagtaacggtttgcttgatatcttcgatggtagccttaactgttccttctgcatccagctgc |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
43193726 |
gggacttctaattcacctgctgaaacaaacaatagacgcagtaacggcttgcttgatatcttcgatggtagccttaactgttccttctgcatccagttgc |
43193825 |
T |
|
| Q |
401 |
ctgagagacctgttactgttag |
422 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
43193826 |
ctgagagacctgttactgttag |
43193847 |
T |
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