View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0874_low_49 (Length: 260)
Name: NF0874_low_49
Description: NF0874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0874_low_49 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 39 - 238
Target Start/End: Complemental strand, 42699726 - 42699527
Alignment:
| Q |
39 |
acgaaggcacgaaaaaactccagccaatgaaaaacaaacaacttagtgactttaaagttttggagggtcgtactcatcaatcttccatatctataaattg |
138 |
Q |
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| T |
42699726 |
acgaaggcacgaaaaaactccagccaatgaaaaacaaacaagttagtgactttaaagttttggagggtcgtactcatcaatcttccatatctataaaatg |
42699627 |
T |
|
| Q |
139 |
agtctaattatggaaagcttcttcaaataatcataactatgtttgaatgtttcaatatgtcaatgtaagtgtgtctcagaacaccaatataggctagtat |
238 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
42699626 |
agtctaattatggaaagcttcttcaaataatcataactatgtttgaatgtttcaataggtcaatgtaagtgtgtctcagaacaccaatataggctagtat |
42699527 |
T |
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