View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0877_high_9 (Length: 284)
Name: NF0877_high_9
Description: NF0877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0877_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 33737123 - 33736881
Alignment:
| Q |
30 |
caacagtgatggagaaaattgatttcttcattatgaaatctcttgcttttgattgacctagaagtttgtcaatttgttttcttgttatggtgaagtaatc |
129 |
Q |
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| T |
33737123 |
caacagtgatggagaaaattgatttcttcattatgaaatctcttgcttttgattgacctagaagtttgtcaatttgttttcttgttatggtgaagtaatc |
33737024 |
T |
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| Q |
130 |
tatttgaatatccattcctatcctattcacctgaaacatgtaatataatccaatacatgtcatggaacaaataaatttttcattttacataatgaatgag |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33737023 |
tatttgaatatccattcctatcctattcacctgaaacatgtaatataatccaatacatgtcatggaacaaataaatttttcattttacataatgaatgag |
33736924 |
T |
|
| Q |
230 |
taagaaatagtaacannnnnnntttgaaatactaacaaatatt |
272 |
Q |
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||||||||||||||| ||||||||||||||||||||| |
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| T |
33736923 |
taagaaatagtaacagggggggtttgaaatactaacaaatatt |
33736881 |
T |
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