View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0879_low_5 (Length: 338)

Name: NF0879_low_5
Description: NF0879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0879_low_5
NF0879_low_5
[»] chr3 (82 HSPs)
chr3 (1-325)||(10795360-10795684)
chr3 (131-262)||(13628790-13628921)
chr3 (131-262)||(46421034-46421166)
chr3 (131-262)||(13730602-13730733)
chr3 (131-262)||(29366720-29366851)
chr3 (134-262)||(40272812-40272938)
chr3 (132-261)||(22609795-22609921)
chr3 (131-262)||(516437-516569)
chr3 (135-262)||(14986989-14987116)
chr3 (131-241)||(8247708-8247818)
chr3 (149-263)||(45786213-45786327)
chr3 (131-262)||(34420643-34420773)
chr3 (131-260)||(26573155-26573282)
chr3 (131-262)||(1217118-1217245)
chr3 (132-262)||(31592878-31593004)
chr3 (146-262)||(49013473-49013589)
chr3 (136-262)||(12914035-12914159)
chr3 (143-262)||(54484730-54484848)
chr3 (131-262)||(16735469-16735597)
chr3 (135-262)||(26869739-26869863)
chr3 (131-262)||(5173719-5173849)
chr3 (133-261)||(22122918-22123042)
chr3 (135-263)||(39203548-39203672)
chr3 (131-262)||(53996565-53996695)
chr3 (135-258)||(54374349-54374471)
chr3 (135-262)||(12525439-12525564)
chr3 (134-262)||(25944500-25944627)
chr3 (134-246)||(33926114-33926224)
chr3 (131-250)||(45948850-45948967)
chr3 (161-260)||(353351-353450)
chr3 (135-241)||(9607235-9607341)
chr3 (131-237)||(45139502-45139607)
chr3 (134-250)||(6411834-6411947)
chr3 (131-262)||(52926219-52926339)
chr3 (152-262)||(15797271-15797377)
chr3 (135-241)||(55401208-55401313)
chr3 (131-258)||(7943018-7943143)
chr3 (144-262)||(25517170-25517287)
chr3 (131-241)||(30928168-30928276)
chr3 (170-262)||(34771364-34771454)
chr3 (136-248)||(43114882-43114994)
chr3 (131-262)||(4495676-4495793)
chr3 (134-237)||(9276289-9276395)
chr3 (135-250)||(44403567-44403681)
chr3 (149-231)||(47624088-47624167)
chr3 (131-262)||(54032571-54032688)
chr3 (131-199)||(7696948-7697014)
chr3 (131-198)||(45620890-45620958)
chr3 (136-250)||(829454-829567)
chr3 (141-262)||(50624953-50625072)
chr3 (142-261)||(31904857-31904975)
chr3 (131-199)||(52428538-52428607)
chr3 (131-187)||(10870025-10870080)
chr3 (139-250)||(19731038-19731147)
chr3 (207-262)||(10484616-10484671)
chr3 (199-262)||(24851301-24851364)
chr3 (202-262)||(30452892-30452952)
chr3 (136-261)||(33235564-33235687)
chr3 (131-194)||(39212018-39212081)
chr3 (139-196)||(19751614-19751671)
chr3 (202-262)||(14266372-14266431)
chr3 (132-195)||(21875042-21875106)
chr3 (214-262)||(47624208-47624256)
chr3 (153-262)||(26292382-26292487)
chr3 (145-199)||(31831241-31831293)
chr3 (199-262)||(46169967-46170030)
chr3 (221-262)||(40390357-40390398)
chr3 (135-198)||(8410929-8410990)
chr3 (131-199)||(29106577-29106645)
chr3 (131-175)||(35417944-35417988)
chr3 (157-248)||(16130329-16130419)
chr3 (206-261)||(45288056-45288111)
chr3 (212-262)||(23871473-23871523)
chr3 (140-263)||(28904980-28905101)
chr3 (198-248)||(40968611-40968661)
chr3 (208-250)||(51644074-51644116)
chr3 (131-177)||(53062066-53062112)
chr3 (131-200)||(1121285-1121354)
chr3 (142-199)||(31672732-31672789)
chr3 (219-263)||(4835856-4835900)
chr3 (198-262)||(10696213-10696277)
chr3 (131-199)||(26782394-26782462)
[»] chr2 (69 HSPs)
chr2 (131-262)||(10543704-10543835)
chr2 (131-263)||(14530324-14530456)
chr2 (131-262)||(8455316-8455445)
chr2 (131-262)||(24200623-24200754)
chr2 (131-262)||(14444735-14444863)
chr2 (131-262)||(9671187-9671314)
chr2 (131-262)||(10546168-10546298)
chr2 (131-262)||(21779261-21779388)
chr2 (131-262)||(5841034-5841165)
chr2 (141-262)||(36871509-36871626)
chr2 (145-262)||(40762234-40762349)
chr2 (134-258)||(7214543-7214667)
chr2 (131-262)||(11514442-11514570)
chr2 (131-262)||(25249738-25249866)
chr2 (131-231)||(12023950-12024047)
chr2 (131-262)||(17668008-17668137)
chr2 (145-263)||(14544083-14544202)
chr2 (134-263)||(23397775-23397900)
chr2 (131-262)||(17623570-17623699)
chr2 (131-262)||(25079717-25079847)
chr2 (131-262)||(39914306-39914435)
chr2 (134-262)||(15296406-15296533)
chr2 (131-251)||(19614998-19615117)
chr2 (131-262)||(19977714-19977843)
chr2 (131-241)||(32781309-32781417)
chr2 (131-231)||(22371063-22371158)
chr2 (131-262)||(17896265-17896395)
chr2 (149-250)||(31158451-31158552)
chr2 (131-263)||(40416870-40417000)
chr2 (137-259)||(4516354-4516474)
chr2 (136-241)||(21377094-21377197)
chr2 (131-241)||(33795291-33795399)
chr2 (131-225)||(5450291-5450384)
chr2 (131-241)||(17380258-17380365)
chr2 (131-246)||(99281-99392)
chr2 (181-262)||(23488537-23488618)
chr2 (131-246)||(25641508-25641620)
chr2 (132-250)||(24860000-24860114)
chr2 (160-262)||(25632544-25632644)
chr2 (140-262)||(30826052-30826170)
chr2 (131-224)||(23145736-23145827)
chr2 (131-224)||(23557526-23557617)
chr2 (131-262)||(44643528-44643658)
chr2 (135-262)||(27573631-27573755)
chr2 (182-241)||(19185764-19185823)
chr2 (201-260)||(41409936-41409995)
chr2 (131-197)||(17705501-17705567)
chr2 (165-249)||(24890451-24890533)
chr2 (207-263)||(8575975-8576031)
chr2 (135-250)||(17471558-17471673)
chr2 (131-200)||(29419945-29420018)
chr2 (201-261)||(40579750-40579810)
chr2 (135-250)||(26684632-26684747)
chr2 (131-259)||(45235820-45235947)
chr2 (149-238)||(44449407-44449495)
chr2 (202-262)||(34080176-34080236)
chr2 (202-262)||(34766330-34766390)
chr2 (131-261)||(13245096-13245215)
chr2 (140-250)||(30864429-30864536)
chr2 (131-199)||(2003597-2003666)
chr2 (214-262)||(22371199-22371247)
chr2 (131-250)||(31821355-31821470)
chr2 (172-252)||(39499240-39499318)
chr2 (214-258)||(124918-124962)
chr2 (131-199)||(12315713-12315780)
chr2 (131-199)||(44521434-44521502)
chr2 (135-179)||(44604864-44604907)
chr2 (208-262)||(3633708-3633762)
chr2 (201-246)||(24059012-24059057)
[»] chr6 (50 HSPs)
chr6 (131-262)||(29355855-29355986)
chr6 (131-262)||(12221914-12222046)
chr6 (135-262)||(9161133-9161259)
chr6 (131-262)||(1346970-1347097)
chr6 (135-262)||(1354757-1354880)
chr6 (131-262)||(2166410-2166541)
chr6 (131-262)||(2178043-2178174)
chr6 (143-262)||(26097178-26097293)
chr6 (135-263)||(7947370-7947497)
chr6 (135-240)||(14553521-14553626)
chr6 (143-262)||(25557743-25557858)
chr6 (131-262)||(18277193-18277322)
chr6 (131-250)||(33138839-33138956)
chr6 (199-262)||(13267797-13267860)
chr6 (131-255)||(3815084-3815206)
chr6 (181-262)||(12885967-12886048)
chr6 (140-248)||(19340843-19340949)
chr6 (140-262)||(1941870-1941990)
chr6 (135-263)||(17432350-17432484)
chr6 (131-262)||(24097587-24097712)
chr6 (131-224)||(6024239-6024332)
chr6 (134-237)||(15866064-15866163)
chr6 (135-255)||(32579436-32579553)
chr6 (182-262)||(12892064-12892144)
chr6 (139-249)||(23240837-23240943)
chr6 (131-217)||(28007634-28007716)
chr6 (131-193)||(8409249-8409311)
chr6 (181-262)||(3116129-3116210)
chr6 (134-234)||(15865885-15865982)
chr6 (200-262)||(6808468-6808530)
chr6 (165-235)||(24734682-24734752)
chr6 (183-263)||(383759-383837)
chr6 (139-262)||(23930127-23930246)
chr6 (135-263)||(12889436-12889563)
chr6 (136-263)||(22967182-22967312)
chr6 (136-263)||(23821081-23821211)
chr6 (131-258)||(14975094-14975209)
chr6 (135-232)||(11849063-11849159)
chr6 (131-231)||(13905011-13905108)
chr6 (131-210)||(4136567-4136646)
chr6 (135-261)||(2755422-2755549)
chr6 (149-262)||(9671084-9671196)
chr6 (202-263)||(10734904-10734965)
chr6 (209-258)||(30786378-30786427)
chr6 (136-262)||(32068107-32068229)
chr6 (202-263)||(11395836-11395896)
chr6 (135-195)||(20400677-20400737)
chr6 (158-234)||(24751101-24751176)
chr6 (131-190)||(17448330-17448389)
chr6 (164-196)||(14341134-14341166)
[»] chr5 (62 HSPs)
chr5 (131-262)||(38879587-38879718)
chr5 (131-262)||(41014325-41014453)
chr5 (131-262)||(43334208-43334339)
chr5 (131-262)||(4619104-4619235)
chr5 (134-263)||(13801766-13801895)
chr5 (131-262)||(24448896-24449025)
chr5 (131-262)||(8169984-8170111)
chr5 (131-262)||(32703430-32703557)
chr5 (135-241)||(27328762-27328868)
chr5 (144-261)||(20135623-20135740)
chr5 (131-262)||(35710319-35710446)
chr5 (130-249)||(19142956-19143072)
chr5 (131-250)||(43574612-43574729)
chr5 (131-262)||(28516433-28516563)
chr5 (150-263)||(16880646-16880757)
chr5 (140-259)||(7368413-7368528)
chr5 (149-263)||(7097759-7097870)
chr5 (134-261)||(12006329-12006455)
chr5 (136-250)||(208939-209051)
chr5 (143-263)||(12575659-12575779)
chr5 (145-262)||(29334415-29334531)
chr5 (132-241)||(22600461-22600568)
chr5 (133-268)||(1565439-1565572)
chr5 (135-263)||(22187295-22187423)
chr5 (131-250)||(42924842-42924963)
chr5 (148-248)||(2838802-2838899)
chr5 (171-263)||(34154813-34154903)
chr5 (131-262)||(1405193-1405322)
chr5 (131-250)||(1850646-1850762)
chr5 (131-238)||(39301129-39301235)
chr5 (185-262)||(16957374-16957449)
chr5 (191-262)||(25622524-25622595)
chr5 (136-241)||(24323726-24323829)
chr5 (136-241)||(24360350-24360453)
chr5 (140-263)||(5873321-5873441)
chr5 (131-190)||(37024626-37024683)
chr5 (131-234)||(41425954-41426055)
chr5 (134-183)||(22025552-22025601)
chr5 (137-263)||(30006337-30006461)
chr5 (165-262)||(3771379-3771474)
chr5 (187-241)||(10306495-10306548)
chr5 (176-250)||(12477132-12477205)
chr5 (131-185)||(23974786-23974840)
chr5 (134-214)||(22907913-22907990)
chr5 (136-240)||(34074584-34074686)
chr5 (203-262)||(16028624-16028683)
chr5 (198-259)||(21784335-21784396)
chr5 (203-263)||(30877563-30877623)
chr5 (202-258)||(39801591-39801647)
chr5 (175-262)||(11657699-11657785)
chr5 (211-262)||(32354211-32354262)
chr5 (199-240)||(21542489-21542530)
chr5 (185-249)||(39079764-39079827)
chr5 (181-250)||(13774921-13774988)
chr5 (219-261)||(19438758-19438800)
chr5 (198-251)||(4654426-4654479)
chr5 (220-261)||(29184062-29184103)
chr5 (135-263)||(31694107-31694233)
chr5 (206-262)||(10943845-10943900)
chr5 (198-262)||(19093884-19093948)
chr5 (136-262)||(24313572-24313699)
chr5 (136-262)||(24355909-24356036)
[»] chr8 (58 HSPs)
chr8 (131-262)||(39460994-39461125)
chr8 (131-262)||(36720802-36720931)
chr8 (131-263)||(13160708-13160837)
chr8 (131-262)||(28817626-28817755)
chr8 (131-262)||(35261685-35261814)
chr8 (131-262)||(44530155-44530284)
chr8 (131-262)||(6760828-6760959)
chr8 (131-261)||(45071271-45071398)
chr8 (131-249)||(44781517-44781635)
chr8 (134-262)||(7136527-7136655)
chr8 (143-262)||(20869941-20870060)
chr8 (131-262)||(12670250-12670377)
chr8 (131-256)||(20284075-20284202)
chr8 (131-262)||(26954138-26954270)
chr8 (131-262)||(29521685-29521814)
chr8 (142-265)||(29877111-29877232)
chr8 (131-256)||(21070703-21070831)
chr8 (131-262)||(2626525-2626657)
chr8 (131-262)||(30454097-30454224)
chr8 (131-262)||(5135290-5135418)
chr8 (136-262)||(25250533-25250659)
chr8 (131-262)||(12625895-12626025)
chr8 (131-267)||(17823582-17823716)
chr8 (131-262)||(8897764-8897893)
chr8 (131-258)||(18164764-18164888)
chr8 (134-250)||(8483950-8484064)
chr8 (136-249)||(17250888-17251001)
chr8 (151-263)||(16225045-16225157)
chr8 (131-241)||(24365080-24365189)
chr8 (136-259)||(44742521-44742643)
chr8 (142-262)||(10857845-10857964)
chr8 (131-225)||(35105929-35106022)
chr8 (131-239)||(20869523-20869625)
chr8 (134-250)||(5689640-5689754)
chr8 (131-250)||(389649-389768)
chr8 (131-253)||(22598163-22598282)
chr8 (131-248)||(42083712-42083828)
chr8 (131-262)||(31457179-31457307)
chr8 (149-217)||(43942348-43942416)
chr8 (134-241)||(14017989-14018095)
chr8 (131-241)||(24245457-24245563)
chr8 (131-262)||(28407422-28407538)
chr8 (131-217)||(11748305-11748391)
chr8 (146-262)||(19729363-19729475)
chr8 (182-262)||(16013511-16013591)
chr8 (140-265)||(23000225-23000338)
chr8 (186-262)||(26102578-26102652)
chr8 (133-263)||(33866957-33867088)
chr8 (202-261)||(27507985-27508044)
chr8 (199-262)||(35107311-35107374)
chr8 (213-262)||(27468092-27468141)
chr8 (137-186)||(30962847-30962896)
chr8 (172-255)||(26457776-26457855)
chr8 (151-212)||(23286375-23286432)
chr8 (136-199)||(36918135-36918198)
chr8 (201-261)||(36486567-36486627)
chr8 (195-258)||(18595906-18595969)
chr8 (219-263)||(30962770-30962814)
[»] chr7 (77 HSPs)
chr7 (131-263)||(47716465-47716597)
chr7 (131-262)||(42805530-42805661)
chr7 (131-262)||(7879644-7879773)
chr7 (131-263)||(2541018-2541148)
chr7 (131-262)||(21172009-21172136)
chr7 (134-262)||(43557481-43557610)
chr7 (131-262)||(27629640-27629769)
chr7 (135-261)||(11617589-11617713)
chr7 (131-263)||(10693072-10693200)
chr7 (131-262)||(42391100-42391227)
chr7 (135-262)||(32758271-32758394)
chr7 (131-262)||(19426890-19427018)
chr7 (133-263)||(33871909-33872036)
chr7 (134-263)||(22698966-22699096)
chr7 (131-233)||(46354200-46354302)
chr7 (131-262)||(40463883-40464011)
chr7 (131-262)||(42798675-42798804)
chr7 (135-265)||(23419671-23419799)
chr7 (131-261)||(29907425-29907552)
chr7 (131-263)||(48735121-48735250)
chr7 (131-260)||(18512455-18512581)
chr7 (137-262)||(34626208-34626330)
chr7 (131-261)||(18747492-18747621)
chr7 (131-237)||(7644962-7645066)
chr7 (131-241)||(35203445-35203555)
chr7 (131-262)||(39123896-39124030)
chr7 (131-262)||(31591109-31591236)
chr7 (131-261)||(42476879-42477005)
chr7 (132-241)||(13805109-13805215)
chr7 (144-241)||(38604546-38604640)
chr7 (150-262)||(35787269-35787378)
chr7 (134-241)||(19266459-19266564)
chr7 (131-262)||(38262196-38262325)
chr7 (135-250)||(21566445-21566559)
chr7 (131-260)||(35334818-35334943)
chr7 (138-261)||(3469176-3469301)
chr7 (131-261)||(16341284-16341413)
chr7 (137-233)||(1408469-1408563)
chr7 (134-238)||(48123508-48123610)
chr7 (134-250)||(14732833-14732948)
chr7 (131-262)||(19265821-19265948)
chr7 (177-262)||(45018923-45019010)
chr7 (134-262)||(32233135-32233260)
chr7 (170-247)||(33500558-33500635)
chr7 (141-264)||(23231573-23231694)
chr7 (135-240)||(2662958-2663058)
chr7 (135-241)||(28362166-28362270)
chr7 (177-262)||(27889316-27889399)
chr7 (134-261)||(11741804-11741927)
chr7 (134-238)||(14099030-14099132)
chr7 (134-238)||(14409047-14409149)
chr7 (131-250)||(47077867-47077982)
chr7 (134-201)||(12473313-12473380)
chr7 (136-247)||(42101899-42102009)
chr7 (134-215)||(5180202-5180283)
chr7 (131-263)||(8148945-8149075)
chr7 (131-183)||(18327040-18327091)
chr7 (204-263)||(11888414-11888473)
chr7 (131-241)||(28078153-28078260)
chr7 (140-260)||(27697452-27697572)
chr7 (131-180)||(42495916-42495964)
chr7 (131-203)||(1423967-1424039)
chr7 (131-199)||(15108458-15108525)
chr7 (131-182)||(7794582-7794635)
chr7 (156-250)||(25434050-25434143)
chr7 (220-262)||(36602540-36602582)
chr7 (132-241)||(44123643-44123749)
chr7 (162-251)||(17048826-17048914)
chr7 (131-199)||(6736896-6736963)
chr7 (211-259)||(42495865-42495913)
chr7 (131-194)||(43852049-43852111)
chr7 (156-249)||(21139761-21139851)
chr7 (178-250)||(36267829-36267900)
chr7 (161-250)||(13792162-13792250)
chr7 (131-167)||(7193091-7193127)
chr7 (190-262)||(23987383-23987455)
chr7 (170-262)||(39093439-39093530)
[»] chr4 (92 HSPs)
chr4 (131-262)||(5648265-5648393)
chr4 (142-262)||(20639658-20639777)
chr4 (131-262)||(16408601-16408732)
chr4 (131-263)||(44363129-44363261)
chr4 (131-262)||(47443963-47444092)
chr4 (131-261)||(40915835-40915962)
chr4 (131-261)||(6430627-6430754)
chr4 (131-262)||(16911568-16911699)
chr4 (135-259)||(21646974-21647098)
chr4 (151-262)||(23501813-23501924)
chr4 (134-262)||(20224993-20225117)
chr4 (131-262)||(48598825-48598952)
chr4 (135-262)||(30639390-30639514)
chr4 (131-260)||(29207900-29208025)
chr4 (131-262)||(9832313-9832440)
chr4 (135-259)||(17043398-17043519)
chr4 (135-262)||(47528530-47528653)
chr4 (131-262)||(54175069-54175200)
chr4 (131-265)||(30690173-30690312)
chr4 (131-262)||(5306660-5306792)
chr4 (134-262)||(35567179-35567305)
chr4 (131-262)||(14983840-14983969)
chr4 (131-250)||(54730255-54730375)
chr4 (131-262)||(30352580-30352720)
chr4 (135-262)||(13256399-13256522)
chr4 (169-263)||(20225118-20225212)
chr4 (145-262)||(25629069-25629184)
chr4 (131-262)||(11054148-11054275)
chr4 (131-250)||(19027854-19027971)
chr4 (137-241)||(21489099-21489202)
chr4 (135-259)||(25343197-25343321)
chr4 (131-262)||(25463128-25463256)
chr4 (136-262)||(20908636-20908761)
chr4 (135-248)||(37494861-37494972)
chr4 (149-250)||(51865050-51865149)
chr4 (143-261)||(7909281-7909397)
chr4 (133-261)||(8473621-8473747)
chr4 (145-244)||(49796818-49796914)
chr4 (137-250)||(9987846-9987957)
chr4 (135-241)||(39029081-39029186)
chr4 (131-258)||(39077800-39077923)
chr4 (135-259)||(36589753-36589876)
chr4 (148-262)||(20405109-20405224)
chr4 (131-239)||(7385499-7385605)
chr4 (136-241)||(10660415-10660519)
chr4 (136-241)||(10874560-10874664)
chr4 (134-246)||(30581481-30581593)
chr4 (186-262)||(33836487-33836563)
chr4 (170-262)||(36816384-36816475)
chr4 (135-263)||(32478791-32478910)
chr4 (135-241)||(49938614-49938715)
chr4 (135-262)||(7038063-7038187)
chr4 (200-263)||(38755907-38755970)
chr4 (131-249)||(41018807-41018922)
chr4 (131-250)||(487138-487264)
chr4 (199-263)||(11394924-11394988)
chr4 (199-263)||(11404651-11404715)
chr4 (156-264)||(48327761-48327869)
chr4 (131-250)||(23580220-23580337)
chr4 (135-241)||(47441551-47441655)
chr4 (136-262)||(55830721-55830844)
chr4 (201-263)||(40553936-40553998)
chr4 (136-241)||(54967032-54967134)
chr4 (131-238)||(10277781-10277884)
chr4 (201-262)||(32484307-32484368)
chr4 (134-262)||(55766466-55766591)
chr4 (170-246)||(16494262-16494338)
chr4 (131-250)||(30496334-30496449)
chr4 (200-263)||(25388249-25388312)
chr4 (199-262)||(38786681-38786744)
chr4 (194-241)||(47482871-47482918)
chr4 (170-262)||(2813170-2813263)
chr4 (137-197)||(51420586-51420646)
chr4 (131-238)||(32629293-32629397)
chr4 (131-211)||(14590843-14590922)
chr4 (212-262)||(35532077-35532127)
chr4 (131-185)||(42164224-42164277)
chr4 (201-263)||(44718641-44718703)
chr4 (134-222)||(17079691-17079777)
chr4 (159-231)||(35894492-35894563)
chr4 (155-241)||(3580861-3580945)
chr4 (200-262)||(50555656-50555718)
chr4 (131-184)||(43035254-43035307)
chr4 (131-168)||(54640431-54640468)
chr4 (180-250)||(48033379-48033449)
chr4 (200-262)||(8820581-8820643)
chr4 (172-261)||(12711450-12711537)
chr4 (131-184)||(17315375-17315427)
chr4 (131-168)||(41549388-41549425)
chr4 (137-210)||(49938490-49938561)
chr4 (202-262)||(19027986-19028046)
chr4 (221-253)||(37038132-37038164)
[»] chr1 (94 HSPs)
chr1 (131-262)||(10668254-10668385)
chr1 (131-262)||(30395726-30395857)
chr1 (131-262)||(35005152-35005283)
chr1 (135-262)||(18944676-18944804)
chr1 (134-262)||(27201679-27201807)
chr1 (131-262)||(46247953-46248082)
chr1 (131-262)||(20004090-20004221)
chr1 (131-262)||(32632557-32632685)
chr1 (131-262)||(34725098-34725225)
chr1 (131-259)||(46991833-46991959)
chr1 (131-250)||(35117777-35117897)
chr1 (131-262)||(35253187-35253314)
chr1 (131-241)||(11596542-11596649)
chr1 (134-260)||(22324925-22325049)
chr1 (135-248)||(23768334-23768445)
chr1 (131-262)||(38478282-38478409)
chr1 (131-250)||(6925129-6925246)
chr1 (131-262)||(14617067-14617196)
chr1 (143-262)||(31382214-31382330)
chr1 (163-264)||(4349699-4349798)
chr1 (159-260)||(19932755-19932856)
chr1 (131-262)||(9939490-9939622)
chr1 (135-262)||(41319806-41319931)
chr1 (132-259)||(45402124-45402251)
chr1 (140-260)||(15511150-15511271)
chr1 (131-241)||(18724566-18724674)
chr1 (131-262)||(19701599-19701729)
chr1 (165-262)||(18741957-18742054)
chr1 (131-262)||(19414468-19414595)
chr1 (131-262)||(47214540-47214667)
chr1 (135-262)||(27474314-27474438)
chr1 (131-250)||(2435798-2435916)
chr1 (134-248)||(17470361-17470472)
chr1 (131-262)||(12126837-12126964)
chr1 (170-262)||(42304207-42304299)
chr1 (134-240)||(25468285-25468389)
chr1 (131-250)||(27136663-27136781)
chr1 (131-241)||(44485130-44485238)
chr1 (136-250)||(45264411-45264524)
chr1 (135-258)||(45812541-45812660)
chr1 (131-262)||(8197072-8197201)
chr1 (170-259)||(10378738-10378825)
chr1 (188-262)||(50606487-50606561)
chr1 (135-262)||(6983811-6983934)
chr1 (144-262)||(23796507-23796623)
chr1 (136-259)||(39214961-39215083)
chr1 (134-227)||(22930104-22930193)
chr1 (131-238)||(20036249-20036355)
chr1 (142-262)||(50811979-50812098)
chr1 (136-255)||(31442396-31442515)
chr1 (131-262)||(19974074-19974203)
chr1 (154-262)||(1517311-1517418)
chr1 (153-262)||(20999850-20999957)
chr1 (169-241)||(15505631-15505701)
chr1 (146-262)||(19656105-19656220)
chr1 (144-239)||(34148983-34149076)
chr1 (133-200)||(22327130-22327197)
chr1 (131-198)||(50760288-50760355)
chr1 (199-257)||(4587568-4587626)
chr1 (131-213)||(33223013-33223093)
chr1 (170-262)||(43768207-43768297)
chr1 (131-250)||(23371153-23371268)
chr1 (165-262)||(5549580-5549677)
chr1 (137-199)||(24564379-24564441)
chr1 (137-250)||(35019265-35019375)
chr1 (133-241)||(30682845-30682949)
chr1 (131-199)||(4430087-4430155)
chr1 (135-246)||(31272397-31272499)
chr1 (135-259)||(52910250-52910379)
chr1 (179-253)||(4430008-4430080)
chr1 (171-246)||(6358190-6358264)
chr1 (131-217)||(25290192-25290285)
chr1 (174-251)||(7074588-7074664)
chr1 (135-248)||(43207528-43207640)
chr1 (142-241)||(20169110-20169207)
chr1 (146-232)||(21723728-21723811)
chr1 (199-250)||(30555210-30555261)
chr1 (202-249)||(33594144-33594191)
chr1 (140-241)||(18335309-18335408)
chr1 (154-239)||(21910673-21910754)
chr1 (176-259)||(28894561-28894642)
chr1 (143-199)||(34679280-34679336)
chr1 (207-262)||(16120819-16120874)
chr1 (183-252)||(4249453-4249520)
chr1 (183-252)||(4249777-4249844)
chr1 (183-252)||(4250101-4250168)
chr1 (136-190)||(14987989-14988043)
chr1 (131-168)||(2435985-2436022)
chr1 (143-191)||(44745854-44745900)
chr1 (165-210)||(46859129-46859173)
chr1 (135-187)||(4251455-4251507)
chr1 (172-239)||(20982773-20982838)
chr1 (203-263)||(37299573-37299633)
chr1 (198-246)||(41440618-41440666)
[»] scaffold0049 (1 HSPs)
scaffold0049 (131-263)||(58983-59115)
[»] scaffold0057 (4 HSPs)
scaffold0057 (131-262)||(46837-46966)
scaffold0057 (150-262)||(24772-24882)
scaffold0057 (138-262)||(43672-43793)
scaffold0057 (172-259)||(46710-46796)
[»] scaffold0168 (1 HSPs)
scaffold0168 (135-262)||(30589-30712)
[»] scaffold0223 (1 HSPs)
scaffold0223 (131-265)||(11137-11267)
[»] scaffold0015 (1 HSPs)
scaffold0015 (134-262)||(48634-48758)
[»] scaffold0258 (1 HSPs)
scaffold0258 (135-262)||(13024-13148)
[»] scaffold0187 (2 HSPs)
scaffold0187 (131-260)||(10052-10177)
scaffold0187 (131-260)||(20380-20505)
[»] scaffold0018 (1 HSPs)
scaffold0018 (131-262)||(72867-72997)
[»] scaffold0311 (1 HSPs)
scaffold0311 (131-262)||(10816-10945)
[»] scaffold1176 (1 HSPs)
scaffold1176 (134-263)||(1586-1711)
[»] scaffold0254 (1 HSPs)
scaffold0254 (131-225)||(4163-4258)
[»] scaffold0954 (1 HSPs)
scaffold0954 (141-264)||(3560-3681)
[»] scaffold0180 (1 HSPs)
scaffold0180 (173-262)||(24133-24220)
[»] scaffold0036 (1 HSPs)
scaffold0036 (131-231)||(35048-35147)
[»] scaffold0167 (1 HSPs)
scaffold0167 (132-241)||(23606-23713)
[»] scaffold0005 (1 HSPs)
scaffold0005 (131-211)||(226456-226535)
[»] scaffold0194 (1 HSPs)
scaffold0194 (173-262)||(24696-24783)
[»] scaffold0050 (1 HSPs)
scaffold0050 (200-263)||(58629-58691)


Alignment Details
Target: chr3 (Bit Score: 317; Significance: 1e-179; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 10795684 - 10795360
Alignment:
Q  1 ttttcaggttaagacactctagctttctgcatctccttttcatattcggcataaaaatccagtgttcatcatataagtgcttattaatttctataacaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10795684 ttttcaggttaagacactctagctttctgcatctccttttcatattcggcataaaaatccagtgttcatcatataagtgcttattaatttctataacaaa 10795585  T
Q  101 atataatgtggtactcaaataaaccgatcccacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaa 200  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10795584 atataatgtgatactcaaataaaccgatcccacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaa 10795485  T
Q  201 atggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccctttactcaaataaaccgatccaaacatatatgatcagttgt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10795484 atggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccctttactcaaataaaccgatccaaacatatatgatcagttgt 10795385  T
Q  301 cgatgaattttcattgtcgcaacag 325  Q
    |||||||||||||||||| ||||||    
T  10795384 cgatgaattttcattgtctcaacag 10795360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 13628921 - 13628790
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  13628921 cacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgta 13628822  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  13628821 tgcgggagctttagtgcaccgggttgcccttt 13628790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 46421166 - 46421034
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  46421166 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgta 46421067  T
Q  231 tgcgggagc-ttcagtgcaccaggttgcccttt 262  Q
    ||||||||| || |||||||| | |||||||||    
T  46421066 tgcgggagctttaagtgcaccggtttgcccttt 46421034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 13730733 - 13730602
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||| |||||| || ||    
T  13730733 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggaccccgcata 13730634  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  13730633 tgcgggagctttagtgcaccgggttgcccttt 13730602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 29366851 - 29366720
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  29366851 cacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgta 29366752  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    || |||||||| |||||||  |||||||||||    
T  29366751 tgtgggagctttagtgcactgggttgcccttt 29366720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 134 - 262
Target Start/End: Complemental strand, 40272938 - 40272812
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||    
T  40272938 gggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccggaccctgcgtatgc 40272841  T
Q  234 gggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||| |||||||| |||||||||||    
T  40272840 gggagctttagtgcaccgggttgcccttt 40272812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 22609795 - 22609921
Alignment:
Q  132 acgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtat 231  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||| |||||||    
T  22609795 acgggttcaagtcttggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccttgcgtat 22609891  T
Q  232 gcgggagcttcagtgcaccaggttgccctt 261  Q
    ||||||||||||||||||| ||||||||||    
T  22609892 gcgggagcttcagtgcaccgggttgccctt 22609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 516437 - 516569
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacacc-aaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||| ||||||||||||  ||||||||||    
T  516437 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaataaaccaaaaaatggcgggaccccttccccgaccctgcgt 516536  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||| |||||||| |||||||||||    
T  516537 atgcgggagctttagtgcaccgggttgcccttt 516569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 14986989 - 14987116
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| ||| ||||||    
T  14986989 ggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcg 14987088  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||| |||||||| |||| ||||||    
T  14987089 ggagctttagtgcaccgggtttcccttt 14987116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 8247818 - 8247708
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  8247818 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggactccttcccggaccctgcgta 8247719  T
Q  231 tgcgggagctt 241  Q
    |||||||||||    
T  8247718 tgcgggagctt 8247708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 149 - 263
Target Start/End: Complemental strand, 45786327 - 45786213
Alignment:
Q  149 aaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgca 248  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| ||||||    
T  45786327 aaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagctttagtgca 45786228  T
Q  249 ccaggttgcccttta 263  Q
    || ||||||||||||    
T  45786227 ccgggttgcccttta 45786213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 34420773 - 34420643
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||||    
T  34420773 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtaccatacacc-aaaatggtgggaccccttcccggaccttgcgta 34420675  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    || |||||||| |||||||  || ||||||||    
T  34420674 tgtgggagctttagtgcacatggctgcccttt 34420643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 131 - 260
Target Start/End: Original strand, 26573155 - 26573282
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||  || |||||||||||| ||| ||||||||||||    
T  26573155 cacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgtacaatacacc--aattggtgggaccccatcccggaccctgcgta 26573252  T
Q  231 tgcgggagcttcagtgcaccaggttgccct 260  Q
    |||| |||||| ||||||||||| ||||||    
T  26573253 tgcgtgagctttagtgcaccaggctgccct 26573282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 1217118 - 1217245
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| |||||||||||| ||||||||| ||    
T  1217118 cacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggcgggaccccttcccggaccctgcata 1217213  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| |||||||||||    
T  1217214 tgcgggagctctagtgcaccgggttgcccttt 1217245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 132 - 262
Target Start/End: Original strand, 31592878 - 31593004
Alignment:
Q  132 acgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtat 231  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||| |||    
T  31592878 acgggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggactccttcccggaccctgcatat 31592973  T
Q  232 gcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||  |||||||| |||||||||||    
T  31592974 gcgggagctctagtgcaccgggttgcccttt 31593004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 49013589 - 49013473
Alignment:
Q  146 tggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagt 245  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || || |||||||||| |||    
T  49013589 tggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagctttagt 49013490  T
Q  246 gcaccaggttgcccttt 262  Q
    ||||| |||||||||||    
T  49013489 gcaccgggttgcccttt 49013473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 12914159 - 12914035
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||  |||||||| ||||||||||  |||||||| |||||||    
T  12914159 gttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggcgtacaatacacc--aaatggtgagaccccttcccagaccctgcatatgcgg 12914062  T
Q  236 gagcttcagtgcaccaggttgcccttt 262  Q
    |||||||| |||||| |||||||||||    
T  12914061 gagcttcaatgcaccgggttgcccttt 12914035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 54484730 - 54484848
Alignment:
Q  143 tcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagctt 241  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  54484730 tcctggaaacagcctcttgtgtaaaaaaacaaggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctt 54484827  T
Q  242 cagtgcaccaggttgcccttt 262  Q
     |||||||| |||||||||||    
T  54484828 tagtgcaccgggttgcccttt 54484848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 16735469 - 16735597
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||| |||||||||||||||  |||| ||||||||||||||||||||||||||||||  |||||||||||||||| |||| |||||||    
T  16735469 cacgggttcaagtcctcgaaacagcctcttgtagaaaa-acagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggacactgcgta 16735565  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||| |||||||||||||  |||||||||||    
T  16735566 tgcggtagcttcagtgcactgggttgcccttt 16735597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 26869739 - 26869863
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||||||||||| | ||||| ||||||||||    
T  26869739 ggttcaagtcctggaaacagcctctggtgtaaaa-acagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttgccggaccatgcgtatgcg 26869835  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||  ||||||| |||||||||||    
T  26869836 ggagctttggtgcaccgggttgcccttt 26869863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 5173849 - 5173719
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||| |||||||||||||| |||  |||||| ||| | ||||||||||||||||||||| |||||||| ||||| ||||||    
T  5173849 cacgggttcaagtcctggaaacaacctcttgtgtaaaa-acaaagtaaggttgcatgcaatacaccaaaaatggtggggccccttcccggaccttgcgta 5173751  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  5173750 tgcgggagctttagtgcaccgggttgcccttt 5173719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 133 - 261
Target Start/End: Complemental strand, 22123042 - 22122918
Alignment:
Q  133 cgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatg 232  Q
    |||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||    
T  22123042 cgggttcaagtcctggaaacagtctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatg 22122947  T
Q  233 cgggagcttcagtgcaccaggttgccctt 261  Q
    || |||||  |||||||| ||||||||||    
T  22122946 cgagagctctagtgcaccgggttgccctt 22122918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 135 - 263
Target Start/End: Original strand, 39203548 - 39203672
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||||||||||  |||||||||||||||| ||||| ||| ||||||    
T  39203548 ggttcaagtccttgaaacagcctcttgtgtaaaa--cagggtaaggttgcgtacaatacaccaaa--tggtgggaccccttcccggaccttgcatatgcg 39203643  T
Q  235 ggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||| |||||||| ||||||||||||    
T  39203644 ggagctttagtgcaccgggttgcccttta 39203672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 53996695 - 53996565
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||| ||||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||  ||| |||||||    
T  53996695 cacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggctgcttacaatacacc-aaaatggtgggaccccttccctgacactgcgta 53996597  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    || |||||||| |||||||| || ||||||||    
T  53996596 tgtgggagctttagtgcaccgggctgcccttt 53996565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 54374471 - 54374349
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||| |||||||| |||||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| ||||||    
T  54374471 ggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggctgcgtacaatccacc-aaaatggtgggaccccttcccggaccctgcatatgcg 54374373  T
Q  235 ggagcttcagtgcaccaggttgcc 258  Q
    ||||||| ||| ||||||| ||||    
T  54374372 ggagctttagttcaccaggctgcc 54374349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 12525439 - 12525564
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||||||||| |   |||||||||||||||||||| ||||||| ||||||| |||| ||    
T  12525439 ggttcgagtcctggaaacagcctcttgtgtaaaaatcagggtaaggctgcgaag--tacaccaaaaatggtgggacaccttcctagaccctgtgtatacg 12525536  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||| ||||||||||||| ||||    
T  12525537 ggagcttcactgcaccaggttgctcttt 12525564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 134 - 262
Target Start/End: Original strand, 25944500 - 25944627
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||||||||||| |||||| |||||||| || ||| ||||||| |||||||||||| ||||||||||||||||||||  |||||||||||||     
T  25944500 gggttcaagtcctggaaaccgcctctcgtgtaaaaaactgggcaaggctgagtacaatacacc-aaaatggtgggaccccttccctgaccctgcgtatgt 25944598  T
Q  234 gggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||| || |||||||| ||||||||    
T  25944599 gggagctttagcgcaccaggctgcccttt 25944627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 134 - 246
Target Start/End: Original strand, 33926114 - 33926224
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| || |||||||||||||||||||||||||| |||||    
T  33926114 gggttcaagtcctggaaatagcctcttgtgtaaaa-acagggtaaggctgtgtacaatacaccataa-tggtgggaccccttcctggaccctgcatatgc 33926211  T
Q  234 gggagcttcagtg 246  Q
    | |||||| ||||    
T  33926212 gagagctttagtg 33926224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 131 - 250
Target Start/End: Complemental strand, 45948967 - 45948850
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||| |||||||||||  || |||||||||||||||  ||||||||||||    
T  45948967 cacgggttcaattcctggaaacaacctcttgtgtaaaaaatagggtaaggctgcatacaatacacc--aattggtgggaccccttctcggaccctgcgta 45948870  T
Q  231 tgcgggagcttcagtgcacc 250  Q
    ||||||||||| ||||||||    
T  45948869 tgcgggagctttagtgcacc 45948850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 353450 - 353351
Alignment:
Q  161 gtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccct 260  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||||||||||||| |||||||| |||||||||    
T  353450 gtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccct 353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 9607235 - 9607341
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| |||| |||||||||||||  ||||| || ||||||    
T  9607235 ggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtagaatacaccaataatgttgggaccccttcccagaccccgcatatgcg 9607334  T
Q  235 ggagctt 241  Q
    |||||||    
T  9607335 ggagctt 9607341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 45139607 - 45139502
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||  |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||  || ||||||||    
T  45139607 cacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcccaga-cctgcgta 45139509  T
Q  231 tgcggga 237  Q
    |||||||    
T  45139508 tgcggga 45139502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 6411947 - 6411834
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||  || |||||||||||||  |||| |||||||||    
T  6411947 gggttcaagtcttgtaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaa--tgatgggaccccttcccagaccttgcgtatgc 6411851  T
Q  234 gggagcttcagtgcacc 250  Q
    |||||||| ||||||||    
T  6411850 gggagctttagtgcacc 6411834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 52926339 - 52926219
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||    
T  52926339 cacgggttcaagtcctggaaacagcctcttgtgta---------gtaaggctgcgtacaatacaccaaa--tggtgggacaccttcccggaccctgcgta 52926251  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| || ||||| |||||||||||    
T  52926250 tgcgggagctttagcgcaccgggttgcccttt 52926219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 15797271 - 15797377
Alignment:
Q  152 cagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcacca 251  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| |||| |||||||  ||||||||     
T  15797271 cagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccg 15797366  T
Q  252 ggttgcccttt 262  Q
    |||||||||||    
T  15797367 ggttgcccttt 15797377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 55401208 - 55401313
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||| ||||||| |||||||| |||||||||||||||||||  ||||| | ||||||||    
T  55401208 ggttcaagtcctgtaaacagcctcttgtgtaaaaaacaggttaagactgcgtataatacacc-aaaatggtgggaccccttctcggaccttccgtatgcg 55401306  T
Q  235 ggagctt 241  Q
    |||||||    
T  55401307 ggagctt 55401313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 258
Target Start/End: Original strand, 7943018 - 7943143
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||| ||||||||||||||||||| |||||| ||||| |||||||||| |||||||||||||| |  ||||||||||| ||||| |  |||| ||||||    
T  7943018 cacggattcaagtcctggaaacagcatcttgtctaaaaaacagggtaagactgcgtacaatacatc--aaatggtgggatccctttccagaccatgcgta 7943115  T
Q  231 tgcgggagcttcagtgcaccaggttgcc 258  Q
    ||||||||||| |||||||  |||||||    
T  7943116 tgcgggagctttagtgcactgggttgcc 7943143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 25517287 - 25517170
Alignment:
Q  144 cctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttc 242  Q
    |||||||||| |||||||||||||| | || | || |||||||||||||||||  |||||||||||||||||||| ||| ||||||||||| |||||||     
T  25517287 cctggaaacatcctcttgtgtaaaaaaacaagatatggctgcgtacaatacac--aaaatggtgggaccccttcccggatcctgcgtatgctggagcttt 25517190  T
Q  243 agtgcaccaggttgcccttt 262  Q
    |||||||| |||||||||||    
T  25517189 agtgcaccgggttgcccttt 25517170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 30928276 - 30928168
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||| || ||| ||||||||  || ||| |||||||||||| ||||||||| ||    
T  30928276 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgtgtaaaatacacc--aattggcgggaccccttcccggaccctgcata 30928179  T
Q  231 tgcgggagctt 241  Q
    || ||||||||    
T  30928178 tgtgggagctt 30928168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 34771454 - 34771364
Alignment:
Q  170 acagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||||||||||  |||||||| || ||||||||    
T  34771454 acagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 34771364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 43114994 - 43114882
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgt-aaaagacagggtaa-ggctgcgtacaatacaccaaaaatggtgggaccccttcctgga-ccctgcgtatg 232  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| |||| | |||||||||||  ||||||||||| ||||||||||| |||||||||||    
T  43114994 gttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaagggctacctacaatacacc--aaatggtggga-cccttcctggacccctgcgtatg 43114898  T
Q  233 cgggagcttcagtgca 248  Q
    ||||||||| ||||||    
T  43114897 cgggagctttagtgca 43114882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 4495793 - 4495676
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||| ||| ||||| |||||||||| |||||||||||||||||||||||||||  ||||||||            ||||||||||||    
T  4495793 cacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgcgtacaatacacc--aaatggtg------------ggaccctgcgta 4495708  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  4495707 tgcgggagctttagtgcaccgggttgcccttt 4495676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 9276289 - 9276395
Alignment:
Q  134 gggttcaagtcctggaaaca------gcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgc 227  Q
    ||||||||||||||||||||      ||||||||||||||| |||||||||||||||||||||||||||  ||||||| |||||| |||| |||||||||    
T  9276289 gggttcaagtcctggaaacaacctcagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc--aaatggt-ggaccctttcccggaccctgc 9276385  T
Q  228 gtatgcggga 237  Q
    ||||||||||    
T  9276386 gtatgcggga 9276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 44403681 - 44403567
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||| ||||||||| || |||||||||||||||||||| |||||||||||| | ||||| |  |||||||||||||||||||| ||||||| |||||||     
T  44403681 ggttaaagtcctgggaatagcctcttgtgtaaaagacaaggtaaggctgcggagaatac-cacaaaatggtgggaccccttcccggaccctacgtatgct 44403583  T
Q  235 ggagcttcagtgcacc 250  Q
    | ||||| ||||||||    
T  44403582 gaagctttagtgcacc 44403567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 47624088 - 47624167
Alignment:
Q  149 aaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtat 231  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||    
T  47624088 aaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccggaccctgtgtat 47624167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 54032688 - 54032571
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||   |||||||            ||||||||||||    
T  54032688 cacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaatacacc--gaatggtg------------ggaccctgcgta 54032603  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  54032602 tgcgggagctttagtgcaccgggttgcccttt 54032571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 7697014 - 7696948
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  7697014 cacgggttcaagtcctggaaacagtctcttgtgtaaa--acagggtaaggctgcgtacaatacaccaaa 7696948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 45620958 - 45620890
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgt-aaaagacagggtaaggctgcgtacaatacaccaa 198  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  45620958 cacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaa 45620890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 829567 - 829454
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    |||||||| || |||||| |||||||| ||||  |||  |||| | ||||||||||||||||||| |||||||||||||||| | ||||||||||||| |    
T  829567 gttcaagttctagaaacaacctcttgtctaaagaacatagtaaagttgcgtacaatacaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcag 829469  T
Q  236 gagcttcagtgcacc 250  Q
    |||||| ||||||||    
T  829468 gagctttagtgcacc 829454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 262
Target Start/End: Complemental strand, 50625072 - 50624953
Alignment:
Q  141 agtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagct 240  Q
    |||||| |||||||||||||||||| || | |||||||||  ||||||||||||||  |  ||||||||| ||||||||| ||||||||| | |||||||    
T  50625072 agtcctagaaacagcctcttgtgtataaaaaagggtaaggtagcgtacaatacacc--atttggtgggacgccttcctgggccctgcgtaagtgggagct 50624975  T
Q  241 tcagtgcaccaggttgcccttt 262  Q
    | |||||||| || ||||||||    
T  50624974 ttagtgcaccgggctgcccttt 50624953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 31904975 - 31904857
Alignment:
Q  142 gtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtggga-ccccttcctggaccctgcgtatgcgggagct 240  Q
    |||||||||||||||| || ||||||| |||||||| | ||||||||||||||||  ||||||||||| ||||||||  || | | ||| ||||||||||    
T  31904975 gtcctggaaacagcctattatgtaaaaaacagggtatgactgcgtacaatacacc--aaatggtgggacccccttcccagatcttacgtgtgcgggagct 31904878  T
Q  241 tcagtgcaccaggttgccctt 261  Q
    | ||||||||||| |||||||    
T  31904877 ttagtgcaccaggctgccctt 31904857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 52428607 - 52428538
Alignment:
Q  131 cacgggttcaagtc-ctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    |||||||| ||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52428607 cacgggtttaagtctctggaagcagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaaa 52428538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 10870080 - 10870025
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgta 187  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10870080 cacgggttcaagtcctggaaacagcctcttgtgtaaaa-acagggtaaggctgcgta 10870025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 19731038 - 19731147
Alignment:
Q  139 caagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggag 238  Q
    ||||||||||||| |||||||||||||||| ||| ||||||| |||||||||||||||   | ||||||||||| ||||  ||| ||| |||||| ||||    
T  19731038 caagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacacc--tattggtgggaccctttcccagactctgtgtatgcaggag 19731135  T
Q  239 cttcagtgcacc 250  Q
    ||| ||||||||    
T  19731136 ctttagtgcacc 19731147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 10484671 - 10484616
Alignment:
Q  207 ggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  10484671 ggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10484616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 24851364 - 24851301
Alignment:
Q  199 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||| |||||||| |||||||||||    
T  24851364 aaatggtgggaccccttcccggatcctgcatatgcgggagctttagtgcaccgggttgcccttt 24851301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 30452892 - 30452952
Alignment:
Q  202 tggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||| ||||||||| ||||||||||||  |||||||| |||||||||||    
T  30452892 tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 30452952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 261
Target Start/End: Original strand, 33235564 - 33235687
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||| || || ||| |||||||||||||||| | ||||||||| ||| ||||||||||| |||  |||||||||||||  | | ||| | ||||||||    
T  33235564 gttcaaatcgtgtaaagagcctcttgtgtaaaaaaacagggtaagactgtgtacaatacactaaa--tggtgggacccctcgcag-accttacgtatgcg 33235660  T
Q  235 ggagcttcagtgcaccaggttgccctt 261  Q
    | ||||| |||||||||||||||||||    
T  33235661 gaagctttagtgcaccaggttgccctt 33235687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 39212018 - 39212081
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaataca 194  Q
    ||||||||||||||||||||| | |||||||||||||  ||| |||||| ||||||||||||||    
T  39212018 cacgggttcaagtcctggaaataacctcttgtgtaaataacaaggtaagactgcgtacaataca 39212081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 19751614 - 19751671
Alignment:
Q  139 caagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacacc 196  Q
    ||||||||||||| ||||||||||||||||  || ||||||| |||||||||||||||    
T  19751614 caagtcctggaaatagcctcttgtgtaaaaatcaaggtaaggttgcgtacaatacacc 19751671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 14266431 - 14266372
Alignment:
Q  202 tggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||||  |||||||||||    
T  14266431 tggtgggaccc-ttcctgaaccctgcgtatgcgggagctttagtgcactgggttgcccttt 14266372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 21875042 - 21875106
Alignment:
Q  132 acgggttcaagtcctggaaacagcctcttgtgt-aaaagacagggtaaggctgcgtacaatacac 195  Q
    |||||||||| | ||||||||| |||||||||| |||| | ||||||||||||||||||||||||    
T  21875042 acgggttcaaattctggaaacaacctcttgtgttaaaaaagagggtaaggctgcgtacaatacac 21875106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 47624208 - 47624256
Alignment:
Q  214 ttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  47624208 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 47624256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 26292382 - 26292487
Alignment:
Q  153 agcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccag 252  Q
    |||||||||||||||  |||||||||| | |||||| |||||||  ||||| ||||| ||||||| | ||||||| ||||||||| ||  |||||||| |    
T  26292382 agcctcttgtgtaaa--acagggtaagaccgcgtacgatacacc--aaatgatgggatcccttcccgaaccctgcatatgcgggaactctagtgcaccgg 26292477  T
Q  253 gttgcccttt 262  Q
    |||| |||||    
T  26292478 gttgtccttt 26292487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 31831241 - 31831293
Alignment:
Q  145 ctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    |||||||||||||||||||||||  | ||||||||||||| ||||||||||||||    
T  31831241 ctggaaacagcctcttgtgtaaa--atagggtaaggctgcatacaatacaccaaa 31831293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 46170030 - 46169967
Alignment:
Q  199 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||| ||||||||||| ||||||||| |||| ||||||||||||||| ||| || ||||||    
T  46170030 aaatggtaggaccccttcccggaccctgcatatgtgggagcttcagtgcatcagattacccttt 46169967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 40390357 - 40390398
Alignment:
Q  221 accctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||||||||||| |||||||| |||||||||||    
T  40390357 accctgcgtatgcgggagctttagtgcaccgggttgcccttt 40390398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 8410990 - 8410929
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaa 198  Q
    |||||| ||||||||||| |||||  |||||||| |||||||||||||||  ||||||||||||    
T  8410990 ggttcaggtcctggaaactgcctc--gtgtaaaaaacagggtaaggctgctcacaatacaccaa 8410929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 29106577 - 29106645
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    ||||||| |||||| || ||||| |||||||||||||| | ||| ||||| | ||||||||||||||||    
T  29106577 cacgggtacaagtcttgaaaacaacctcttgtgtaaaaaataggataaggttacgtacaatacaccaaa 29106645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 35417944 - 35417988
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacaggg 175  Q
    |||| |||||| |||||||||||||||||||||||||| ||||||    
T  35417944 cacgagttcaaatcctggaaacagcctcttgtgtaaaaaacaggg 35417988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 16130329 - 16130419
Alignment:
Q  157 tcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgca 248  Q
    |||| |||||||  |||| |||||||||| |||||||||| |||||||||||||||  |||| |||| ||||||  | ||||||| ||||||    
T  16130329 tcttctgtaaaaagcaggataaggctgcgaacaatacacc-aaaatggtgggaccctgtcctagaccttgcgtacacaggagctttagtgca 16130419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 45288111 - 45288056
Alignment:
Q  206 gggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccctt 261  Q
    |||||| ||||| |||||||||||||||  |||||| ||||||||||| |||||||    
T  45288111 gggacctcttcccggaccctgcgtatgcaagagctttagtgcaccaggctgccctt 45288056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 23871473 - 23871523
Alignment:
Q  212 ccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||| |||| ||||||||||||||| ||| |||||||| |||||||||||    
T  23871473 ccttcatggatcctgcgtatgcgggaactttagtgcaccgggttgcccttt 23871523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 263
Target Start/End: Original strand, 28904980 - 28905101
Alignment:
Q  140 aagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggag 238  Q
    |||||| || ||||| ||||||||||||| | || |||||| ||| ||||| ||||||||| ||||   ||||| |||| |||||||||||| ||||||     
T  28904980 aagtccagggaacagtctcttgtgtaaaataacaaggtaagactgtgtacattacaccaaatatgg---gaccctttcccggaccctgcgtaagcgggaa 28905076  T
Q  239 cttcagtgcaccaggttgcccttta 263  Q
    ||| |||| | | || |||||||||    
T  28905077 ctttagtgtaacgggctgcccttta 28905101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 40968611 - 40968661
Alignment:
Q  198 aaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgca 248  Q
    ||||||||| ||||||||||| |||||| | ||||||||||||| ||||||    
T  40968611 aaaatggtgagaccccttcctagaccctacatatgcgggagctttagtgca 40968661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 51644074 - 51644116
Alignment:
Q  208 gaccccttcctggaccctgcgtatgcgggagcttcagtgcacc 250  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||    
T  51644074 gaccccttcctggaccctgggtatgcgagagctttagtgcacc 51644116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 53062066 - 53062112
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggta 177  Q
    |||| ||||||||||||||||||||||| ||||| ||| ||||||||    
T  53062066 cacgtgttcaagtcctggaaacagcctcctgtgtcaaaaacagggta 53062112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 1121354 - 1121285
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaa 200  Q
    |||| ||| |||||||||||||| | |||||||||| | | | ||| || ||||||||||||||||||||    
T  1121354 cacgtgtttaagtcctggaaacaacttcttgtgtaagaaataaggtgagactgcgtacaatacaccaaaa 1121285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 31672732 - 31672789
Alignment:
Q  142 gtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    |||||||||||||||| || ||||||| ||| || |||  ||||||||||||||||||    
T  31672732 gtcctggaaacagcctattatgtaaaaaacaaggcaagagtgcgtacaatacaccaaa 31672789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 4835856 - 4835900
Alignment:
Q  219 ggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||||||| || ||||||||||||||| ||||| ||||||    
T  4835856 ggaccctgcgtatacgtgagcttcagtgcaccgggttgtccttta 4835900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 10696277 - 10696213
Alignment:
Q  198 aaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||| |||||||||||||||  |||||||||| | ||||||| | ||||||| ||| ||||||||    
T  10696277 aaaagggtgggaccccttcccagaccctgcgtctacgggagcattagtgcactaggctgcccttt 10696213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 26782394 - 26782462
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    ||||| |||||||||| ||||||  ||||||||||||| | ||||||| ||||  || |||||||||||    
T  26782394 cacggattcaagtccttgaaacaatctcttgtgtaaaaaatagggtaatgctgtataaaatacaccaaa 26782462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 1e-56; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 10543704 - 10543835
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10543704 cacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgta 10543803  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  10543804 tgcgggagctttagtgcaccgggttgcccttt 10543835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 14530324 - 14530456
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  14530324 cacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctacgtacaatacaccaataatggtgggaccccttcccggaccctgcgta 14530423  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||||| |||||||| ||||||||||||    
T  14530424 tgcgggagctttagtgcaccgggttgcccttta 14530456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 8455445 - 8455316
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  8455445 cacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccggaccctgcgta 8455348  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||| ||||||| |||||||| |||||||||||    
T  8455347 tgccggagctttagtgcaccgggttgcccttt 8455316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 24200754 - 24200623
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||    
T  24200754 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaacccttcccggaccctgagta 24200655  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    || | |||||| |||||||| |||||||||||    
T  24200654 tgtgagagctttagtgcaccgggttgcccttt 24200623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 14444735 - 14444863
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||  |||||||||||||||| ||||||||||||    
T  14444735 cacgggttcaagtcctggaaacagcctcttgtgtaaaa-acagggtaaggctgtgtacgatacaccaaa--tggtgggaccccttcccggaccctgcgta 14444831  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| ||||||||||||||||||||    
T  14444832 tgcgggagctttagtgcaccaggttgcccttt 14444863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 9671187 - 9671314
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  9671187 cacgggttcaaatcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgta 9671282  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  9671283 tgcgggagctttagtgcaccgggttgcccttt 9671314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 10546168 - 10546298
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    ||||||||||||||||||||||| |||||||| ||||| | |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  10546168 cacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgt 10546265  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||| |||||||| |||||||||||    
T  10546266 atgcgggagctttagtgcaccgggttgcccttt 10546298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 21779388 - 21779261
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||| ||    
T  21779388 cacgggttcaagtcctggagacagcctcttgtgtaaaa--cagggtaaggttgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcata 21779293  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| |||||||||||    
T  21779292 tgcgggagctctagtgcaccgggttgcccttt 21779261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 5841034 - 5841165
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||| |||||||||| |||||||||| | ||||||||| ||||||||||||| ||| |||||||||||||||||| |||||| || ||    
T  5841034 cacgggttcaagtcctagaaacagccttttgtgtaaaaaatagggtaaggatgcgtacaatacatcaataatggtgggaccccttcccggaccccgcata 5841133  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| ||||||||  ||||||||||    
T  5841134 tgcgggagctttagtgcaccgagttgcccttt 5841165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 36871509 - 36871626
Alignment:
Q  141 agtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagct 240  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||||||    
T  36871509 agtcctggaaacagcctcttgtgtgaaa-acagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggacc-tgcgtatgcgggagct 36871604  T
Q  241 tcagtgcaccaggttgcccttt 262  Q
    | |||||||| |||||||||||    
T  36871605 ttagtgcaccgggttgcccttt 36871626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 145 - 262
Target Start/End: Complemental strand, 40762349 - 40762234
Alignment:
Q  145 ctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcag 244  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||| |||||||| ||    
T  40762349 ctggaaacagcctcttgtgtaaaaaactgggtaaggctacgtacaatacaccaaa--tggtgggaccctttcctggaccctgcgtatgtgggagctttag 40762252  T
Q  245 tgcaccaggttgcccttt 262  Q
    |||||| |||||||||||    
T  40762251 tgcaccgggttgcccttt 40762234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 134 - 258
Target Start/End: Original strand, 7214543 - 7214667
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||  |||| ||||||||||    
T  7214543 gggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgcgtacaatacacaaaaaatggtgagatcccttctcggacactgcgtatgc 7214642  T
Q  234 gggagcttcagtgcaccaggttgcc 258  Q
    | ||| || ||||||||||||||||    
T  7214643 gagagttttagtgcaccaggttgcc 7214667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 11514442 - 11514570
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||| |||||||||||||||||||||||||| |||  ||||||||||||||||||||||  ||||||||||| |||||||  |||||||||||    
T  11514442 cacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaaggctgcgtacaatacacc--aaatggtggga-cccttcccagaccctgcgta 11514538  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| | |||||||||    
T  11514539 tgcgggagctttagtgcaccggattgcccttt 11514570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 25249866 - 25249738
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||||||||||||||  |||||||| ||||||| | ||||||||||    
T  25249866 cacgggttcaagtcatggaaacagtctcttgtgtacaa-acagggtaaggctgcgtacaatacaccaaa--tggtgggatcccttcccgaaccctgcgta 25249770  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||| |||||| |||||||| |||||||||||    
T  25249769 tgcgtgagctttagtgcaccgggttgcccttt 25249738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 12024047 - 12023950
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||||    
T  12024047 cacgggttcaagtcctggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacacc--aaatggtgggaccccctcccggaccctgcgta 12023951  T

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Target: chr2; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 17668008 - 17668137
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||| | ||||||||||||||  ||||||||||||||||||||||||||  ||||||||| ||||||||  | ||||||||||    
T  17668008 cacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacacc--aaatggtggaaccccttctcgaaccctgcgta 17668105  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |  |||||||| |||||||| |||||||||||    
T  17668106 tatgggagctttagtgcaccgggttgcccttt 17668137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 145 - 263
Target Start/End: Original strand, 14544083 - 14544202
Alignment:
Q  145 ctggaaacagcctcttgtgta-aaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttca 243  Q
    ||||||||||||||||||||| ||| |||||||||| |||||| |||||  | ||||||||| ||||||||||| ||||||||||||||||||||||| |    
T  14544083 ctggaaacagcctcttgtgtagaaaaacagggtaagactgcgtgcaataaccaaaaaatggtcggaccccttccgggaccctgcgtatgcgggagcttta 14544182  T
Q  244 gtgcaccaggttgcccttta 263  Q
    |||||||| |||||||||||    
T  14544183 gtgcaccaagttgcccttta 14544202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 134 - 263
Target Start/End: Original strand, 23397775 - 23397900
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||||  |||||||||||||||  ||||||| | |||||    
T  23397775 gggttcaagtcctggaaacagcctcttgtgtaaaata--gggtaaggctacgtacaatacaccaaa--tggtgggaccccttctcggaccctacatatgc 23397870  T
Q  234 gggagcttcagtgcaccaggttgcccttta 263  Q
    |||||||  |||||||| ||||||||||||    
T  23397871 gggagctctagtgcaccgggttgcccttta 23397900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 17623570 - 17623699
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||||||||||||  ||||||||| ||||||||| | | ||||||||    
T  17623570 cacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacacc--aaatggtggaaccccttcccgaatcctgcgta 17623667  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    || || ||||| |||||||  |||||||||||    
T  17623668 tgtggaagctttagtgcactgggttgcccttt 17623699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 25079847 - 25079717
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||||||||||||| | |||||| |||||||||||||| | || ||||||| ||||||||||||||| ||  |||||||||||||||| |||||||||||    
T  25079847 cacgggttcaagtcttagaaacaacctcttgtgtaaaaaaacaaggtaaggatgcgtacaatacaccgaa--tggtgggaccccttcccggaccctgcgt 25079750  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||  |||||| |||||||| |||||||||||    
T  25079749 atgcaagagctttagtgcaccgggttgcccttt 25079717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 39914435 - 39914306
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||||| |||||| ||||||||| |||||||||||||| | |||||||||| || |||||||||||| ||  |||||||||||||||||| |||||||||    
T  39914435 cacgggatcaagtactggaaacaacctcttgtgtaaaaaaacagggtaaggatgtgtacaatacaccgaa--tggtgggaccccttcctg-accctgcgt 39914339  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||| |||||| | |||||||||||    
T  39914338 atgcgggagctttagtgcatcgggttgcccttt 39914306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 134 - 262
Target Start/End: Complemental strand, 15296533 - 15296406
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||| |||||| ||||||  ||||||||||||||     
T  15296533 gggttcaagtcccggaaacagcctgttgtgtaaaatacagggtaaggctgcgtacaatatacc-aaaatagtgggatcccttctcggaccctgcgtatgt 15296435  T
Q  234 gggagcttcagtgcaccaggttgcccttt 262  Q
    || |||||  |||| ||||| ||||||||    
T  15296434 ggaagctttggtgcgccaggctgcccttt 15296406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 19614998 - 19615117
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||| |||||| |||||||| ||||| |||||||||| |||||||||||| ||||| ||| || ||||||||||| | ||||||||||    
T  19614998 cacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtacaatataccaataatagt-ggaccccttcccgaaccctgcgta 19615096  T
Q  231 tgcgggagcttcagtgcacca 251  Q
    ||| ||||||| |||||||||    
T  19615097 tgcaggagctttagtgcacca 19615117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 19977843 - 19977714
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||| |||||||||||||||| ||||||| | ||| ||||| |||||||||||||||  ||||||||||| ||||||| | ||| || |||    
T  19977843 cacgggttcaagttctggaaacagcctcttttgtaaaaaataggataaggttgcgtacaatacacc--aaatggtgggatcccttcccgaaccttgtgta 19977746  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||||| || ||||||    
T  19977745 tgcgggagctttagtgcaccagattacccttt 19977714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 32781417 - 32781309
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||| |||||||||  ||||||| |||||||||||||| |||||||||| ||||||||||||||||  |||||||||||||||||||  ||||||| |||    
T  32781417 cacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacacc--aaatggtgggaccccttcccagaccctgtgta 32781320  T
Q  231 tgcgggagctt 241  Q
    |||||||||||    
T  32781319 tgcgggagctt 32781309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 22371063 - 22371158
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| |||    
T  22371063 cacgggttcaagtcctggaaacagcctc--gtgtaaaa-acagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccggaccctgtgta 22371157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 17896265 - 17896395
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagac-agggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    ||||| |||||||||| |||||| |||||||||||||| |  ||||||||||||||||||||| ||||||  |||||||||||||||  |||||||||||    
T  17896265 cacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaaggctgcgtacaatataccaaa--tggtgggaccccttctcggaccctgcgt 17896362  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||| |||||||| |||||| |  ||||||||||    
T  17896363 atgtgggagctttagtgcatcgagttgcccttt 17896395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 149 - 250
Target Start/End: Complemental strand, 31158552 - 31158451
Alignment:
Q  149 aaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgca 248  Q
    ||||||||||||| |||||| ||||||||||  ||| ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||    
T  31158552 aaacagcctcttgcgtaaaaaacagggtaagattgcatacaataaaccaaaaatggtgggaccccttcccagaccctgcgtatgcgggagctttagtaca 31158453  T
Q  249 cc 250  Q
    ||    
T  31158452 cc 31158451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 131 - 263
Target Start/End: Complemental strand, 40417000 - 40416870
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||| |||||||| |||||||| ||||| |||||| ||||||| ||||||||||||  || || |||||||| ||  |||||||||| ||    
T  40417000 cacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggctgtgtacaatacacc--aattgatgggacccttttttggaccctgcata 40416903  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttta 263  Q
    |||| |||||| |||||||| ||||||||||||    
T  40416902 tgcgagagctttagtgcaccgggttgcccttta 40416870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 259
Target Start/End: Complemental strand, 4516474 - 4516354
Alignment:
Q  137 ttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcggg 236  Q
    ||||||| || ||||||||||||||||||||| |||||| || |||||||||||||||||  || |||||||||||||||| |||||||||||||| ||     
T  4516474 ttcaagttctagaaacagcctcttgtgtaaaaaacagggcaacgctgcgtacaatacacc--aattggtgggaccccttcccggaccctgcgtatgtgga 4516377  T
Q  237 agcttcagtgcaccaggttgccc 259  Q
    ||||| |||| ||| || |||||    
T  4516376 agctttagtgtaccgggctgccc 4516354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 136 - 241
Target Start/End: Complemental strand, 21377197 - 21377094
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    ||||||||| | |||||| |||||||||||||| |||||||||||||| ||||||| ||||  ||||||||||||||||||| | |||||||||||| ||    
T  21377197 gttcaagtcatagaaacatcctcttgtgtaaaaaacagggtaaggctgggtacaatgcacc--aaatggtgggaccccttcccgaaccctgcgtatgtgg 21377100  T
Q  236 gagctt 241  Q
    ||||||    
T  21377099 gagctt 21377094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 33795291 - 33795399
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtac-aatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    ||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||||||| ||||||||    |||||||||||||||||  ||||||| ||    
T  33795291 cacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggctgcgtacaaatacacc---tatggtgggaccccttcccagaccctgtgt 33795387  T
Q  230 atgcgggagctt 241  Q
    ||||||||||||    
T  33795388 atgcgggagctt 33795399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 5450291 - 5450384
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgt-aaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccct 225  Q
    ||||||||||| ||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  5450291 cacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggtaaggctgcgtacaatacacc--aaagggtgggaccccttcctggaccct 5450384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 17380365 - 17380258
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||| |||||||| ||||||||||| || ||||||||||| || || ||||||||||||  || ||| |||||||||||||||||||| |    
T  17380365 cacgggttcaagtcttggaaacaacctcttgtgtataa-acagggtaaggttgtgtgcaatacaccaaa--tgatggaaccccttcctggaccctgcgga 17380269  T
Q  231 tgcgggagctt 241  Q
    |||||||||||    
T  17380268 tgcgggagctt 17380258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 131 - 246
Target Start/End: Complemental strand, 99392 - 99281
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||| ||||||||||||  ||||||| ||| || ||||||||||||||||||||  ||||||||| ||||||||   ||||||| |||    
T  99392 cacgggttcaagtcctagaaacagcctct--tgtaaaaaacatggcaaggctgcgtacaatacacc--aaatggtggaaccccttctcagaccctgtgta 99297  T
Q  231 tgcgggagcttcagtg 246  Q
    ||||||||||| ||||    
T  99296 tgcgggagctttagtg 99281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 23488537 - 23488618
Alignment:
Q  181 ctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||| |||||||| ||||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||||| ||||    
T  23488537 ctgcgtgcaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcgagagctttagtgcaccgggttgctcttt 23488618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 246
Target Start/End: Original strand, 25641508 - 25641620
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||| | |||||| ||| ||||||||| | |||||||||||||||  |||| |||||||||||||| | | ||||||||    
T  25641508 cacgggttcaagtcctggaaacagcattttgtgtgaaa-acagggtaaagttgcgtacaatacacc--aaattgtgggaccccttcccgaatcctgcgta 25641604  T
Q  231 tgcgggagcttcagtg 246  Q
    |||| |||||| ||||    
T  25641605 tgcgagagctttagtg 25641620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 132 - 250
Target Start/End: Complemental strand, 24860114 - 24860000
Alignment:
Q  132 acgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtat 231  Q
    ||||||| ||| |||||||||| ||||| |||||||| ||| |||| |||||||||||||||||||||  |||| | ||||||||  |||||||||||||    
T  24860114 acgggtttaagccctggaaacaacctctggtgtaaaa-acatggta-ggctgcgtacaatacaccaaa--tggtagaaccccttctcggaccctgcgtat 24860019  T
Q  232 gcgggagcttcagtgcacc 250  Q
    |||||||||| ||||||||    
T  24860018 gcgggagctttagtgcacc 24860000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 25632544 - 25632644
Alignment:
Q  160 tgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccc 259  Q
    ||||||||| ||||| |||||||||||||||||||||  |||||||||||  |||||| | ||| | ||||||||||||||| |||||||| ||||||||    
T  25632544 tgtgtaaaaaacaggataaggctgcgtacaatacacc--aaatggtgggattccttcccgaaccttacgtatgcgggagctttagtgcaccgggttgccc 25632641  T
Q  260 ttt 262  Q
    |||    
T  25632642 ttt 25632644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 140 - 262
Target Start/End: Original strand, 30826052 - 30826170
Alignment:
Q  140 aagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagc 239  Q
    ||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||  ||||||| ||| |||||||  |||||| | |||||||||||    
T  30826052 aagtcttggaaacagcctcttgtgtaaaa-atagggtaaggttgcgtacaatacacc--aaatggt-ggaacccttcccagaccctacatatgcgggagc 30826147  T
Q  240 ttcagtgcaccaggttgcccttt 262  Q
    || |||||||||| ||| |||||    
T  30826148 tttagtgcaccagattgtccttt 30826170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 23145827 - 23145736
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccc 224  Q
    |||||||||||||| || |||||| ||||||||||||| |||| ||||||||||||||||||||||  || ||||||||||| |||| ||||||    
T  23145827 cacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacacc--aattggtgggaccctttcccggaccc 23145736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 23557617 - 23557526
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccc 224  Q
    |||||||||||||| || |||||| ||||||||||||| |||| ||||||||||||||||||||||  || ||||||||||| |||| ||||||    
T  23557617 cacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacacc--aattggtgggaccctttcccggaccc 23557526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 44643528 - 44643658
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||| |||||||| || |||| ||||||||  |||||| | ||| |||||||||||||||||  ||||||  ||||||||||||||||  ||||||||||    
T  44643528 cacgtgttcaagttctagaaagagcctcttccgtaaaaaaacagagtaaggctgcgtacaatgtaccaaa--tggtgggaccccttcccagaccctgcgt 44643625  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||| | |||||||| || ||||||||    
T  44643626 atgcgggagccttagtgcaccgggctgcccttt 44643658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 27573631 - 27573755
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||| || |||||||||||||||| || ||| |||||||||||||||||||||||  ||||||||| |||  ||||   |||||| ||||| |    
T  27573631 ggttcaagtccgggcaacagcctcttgtgtataa-acatggtaaggctgcgtacaatacacc--aaatggtggaaccatttcccaaaccctgtgtatgtg 27573727  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||| |||||| | |||||||||||    
T  27573728 ggagctttagtgcatcgggttgcccttt 27573755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 19185823 - 19185764
Alignment:
Q  182 tgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagctt 241  Q
    |||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  19185823 tgcgtacaatgcacaaaaaatggtggaaccccttcctggaccctgcgtatgcgggagctt 19185764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 41409936 - 41409995
Alignment:
Q  201 atggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccct 260  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  41409936 atggtgggaccccttcccggaccctgcatatgcgggagcttcagtgcaccgggttgccct 41409995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 17705501 - 17705567
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacacca 197  Q
    |||||||||||||||||||||| ||||||||||||||  |||| ||||||||| |||||||||||||    
T  17705501 cacgggttcaagtcctggaaaccgcctcttgtgtaaacaacagagtaaggctgtgtacaatacacca 17705567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 24890451 - 24890533
Alignment:
Q  165 aaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcac 249  Q
    |||| ||| ||||||||||| |||||||||||||   |||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  24890451 aaaaaacaaggtaaggctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcac 24890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 8575975 - 8576031
Alignment:
Q  207 ggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||    
T  8575975 ggaccccttcccggaccctgcgtatgtgggagctttagtgcaccaggttgcccttta 8576031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 17471558 - 17471673
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgt-aaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||   ||||||||||||||||| |||| ||||| |||| |||||||||||| ||| |||||| || ||||||||||  |||||||| |||||    
T  17471558 ggttcaagtctcagaaacagcctcttgtgtaaaaaaacaggataagactgcgtacaatatacc-aaaatgatgagaccccttccctgaccctgcctatgc 17471656  T
Q  234 gggagcttcagtgcacc 250  Q
    ||||| || ||||||||    
T  17471657 gggagttttagtgcacc 17471673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 29420018 - 29419945
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagg----gtaaggctgcgtacaatacaccaaaa 200  Q
    |||| |||||||||||||||||| |||||||||||||| |||||    ||||||||||||||||||||||||||    
T  29420018 cacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagtaaggctgcgtacaatacaccaaaa 29419945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 40579810 - 40579750
Alignment:
Q  201 atggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccctt 261  Q
    ||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||    
T  40579810 atggtgggaccccttcccggaccctgagtatgcgggagctttagtgcaccgggttgccctt 40579750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 26684747 - 26684632
Alignment:
Q  135 ggttcaagtcctggaaacag-cctcttgtgtaaaagac-agggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatg 232  Q
    |||| |||||||| |||||| |||||||||||||| |  | ||||||||||||||||||| || |||  |||||||||| ||||| | ||||||||||||    
T  26684747 ggtttaagtcctgaaaacagacctcttgtgtaaaaaaatatggtaaggctgcgtacaatatactaaa--tggtgggacctcttcccgaaccctgcgtatg 26684650  T
Q  233 cgggagcttcagtgcacc 250  Q
    ||||||||| | ||||||    
T  26684649 cgggagctttaatgcacc 26684632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 259
Target Start/End: Complemental strand, 45235947 - 45235820
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagac-agggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||| ||||||||||| ||||||| ||||| ||||||| |  ||||||||||| |||  |||||||  |||||||||||||||||| |  |||||| |||    
T  45235947 cacgagttcaagtcctagaaacagtctcttctgtaaaataatagggtaaggctacgtgtaatacac--aaaatggtgggaccccttaccagaccctacgt 45235850  T
Q  230 atgcgggagcttcagtgcaccaggttgccc 259  Q
    |||| ||||||| |||| |||| |||||||    
T  45235849 atgcaggagctttagtgtaccaagttgccc 45235820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 44449495 - 44449407
Alignment:
Q  149 aaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggag 238  Q
    ||||| |||||||  | ||| ||||| ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| || |||||    
T  44449495 aaacaacctcttgaatgaaaaacaggataaggctgcgtacaatacacc-aaaatagtgggaccccttcccggaccctgcgtttgtgggag 44449407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 34080176 - 34080236
Alignment:
Q  202 tggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||| ||||||||| |||||||||| || |||||||| |||||||||||    
T  34080176 tggtgggaccccttcccggaccctgcatatgcgggagttttagtgcaccgggttgcccttt 34080236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 34766330 - 34766390
Alignment:
Q  202 tggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||| | |||| ||||||    
T  34766330 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggtttcccttt 34766390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 13245215 - 13245096
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||| |||||||||||||||||| ||||||||||         |||||||||||||||| ||||| |||  |||||||||||||||| ||||| ||| ||    
T  13245215 cacgagttcaagtcctggaaacaacctcttgtgt---------ggtaaggctgcgtacattacactaaa--tggtgggaccccttcccggaccatgcata 13245127  T
Q  231 tgcgggagcttcagtgcaccaggttgccctt 261  Q
    | ||||||||| |||| | | ||||||||||    
T  13245126 tacgggagctttagtgtatcgggttgccctt 13245096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 250
Target Start/End: Complemental strand, 30864536 - 30864429
Alignment:
Q  140 aagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagc 239  Q
    ||||| ||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||  ||||  || || ||||   ||||||||||||||| |||    
T  30864536 aagtcatggaaacagcctcttgtgtaaaa-atagggtaagggtgcgtacaatataccaaa--tggtaagatcctttcccaaaccctgcgtatgcggaagc 30864440  T
Q  240 ttcagtgcacc 250  Q
    ||| |||||||    
T  30864439 ttcggtgcacc 30864429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 2003666 - 2003597
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgt-aaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    ||||||| |||||||||||||||||| |||| || |||| ||||||||||| ||||||||||||| ||||    
T  2003666 cacgggtacaagtcctggaaacagccccttgcgtaaaaaaacagggtaaggatgcgtacaatacaacaaa 2003597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 22371199 - 22371247
Alignment:
Q  214 ttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  22371199 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 22371247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 250
Target Start/End: Complemental strand, 31821470 - 31821355
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||| ||||||||| | |||||||||   ||||||||| | ||||||||| || ||||||||||||  ||||| ||||||||||| | | | |||| |||    
T  31821470 cacgagttcaagtcgtagaaacagccg--tgtgtaaaaaatagggtaaggttgtgtacaatacacc--aaatgatgggacccctttccgaaacctgtgta 31821375  T
Q  231 tgcgggagcttcagtgcacc 250  Q
    ||||||||||| | ||||||    
T  31821374 tgcgggagctttaatgcacc 31821355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 252
Target Start/End: Complemental strand, 39499318 - 39499240
Alignment:
Q  172 agggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccag 252  Q
    ||||||| ||||||||||||||| ||||  |||||||| |||||   | | ||||||||||||||||||| ||||||||||    
T  39499318 agggtaaagctgcgtacaatacatcaaa--tggtgggatcccttttcgaatcctgcgtatgcgggagctttagtgcaccag 39499240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 124962 - 124918
Alignment:
Q  214 ttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcc 258  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||    
T  124962 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 124918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 12315780 - 12315713
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    |||| ||||||||| |||||||||| |||| | ||||| |||||||||| ||| |||||||||||||||    
T  12315780 cacgagttcaagtcatggaaacagcttcttat-taaaaaacagggtaagactgtgtacaatacaccaaa 12315713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 44521502 - 44521434
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    |||| |||||| || ||||||||  ||||||||||||| ||| ||||||||||| || |||||||||||    
T  44521502 cacgcgttcaaatcttggaaacaatctcttgtgtaaaaaacaaggtaaggctgcatataatacaccaaa 44521434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 44604864 - 44604907
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaag 179  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||    
T  44604864 ggttcaagtcctggaaacaacctcttgtgtaaaa-acagggtaag 44604907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 3633762 - 3633708
Alignment:
Q  208 gaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||| |||||| || ||||||||||||| ||||||||  ||||||||||    
T  3633762 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgcccttt 3633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 24059057 - 24059012
Alignment:
Q  201 atggtgggaccccttcctggaccctgcgtatgcgggagcttcagtg 246  Q
    ||||||||||||||| | |||||||||||||| |||||||| ||||    
T  24059057 atggtgggacccctttccggaccctgcgtatgtgggagctttagtg 24059012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 3e-54; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 29355986 - 29355855
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  29355986 cacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgta 29355887  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  29355886 tgcgggagctttagtgcaccgggttgcccttt 29355855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 12222046 - 12221914
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  12222046 cacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgta 12221947  T
Q  231 tgcgggagc-ttcagtgcaccaggttgcccttt 262  Q
    ||||||||| || |||||||| |||||||||||    
T  12221946 tgcgggagcttttagtgcaccgggttgcccttt 12221914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 9161133 - 9161259
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||||||    
T  9161133 ggttcaagtcctggaaacagcctcttgtgtaaaa-acagagtaaggctgcgtacaatacatcaataatggtgggaccccttctcggaccctgcgtatgcg 9161231  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    | ||||| ||||||||||||||||||||    
T  9161232 gaagctttagtgcaccaggttgcccttt 9161259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 1346970 - 1347097
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||    
T  1346970 cacgggttcaagtcctggaaacagccacttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcata 1347065  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| |||||||||||    
T  1347066 tgcgggagctctagtgcaccgggttgcccttt 1347097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 1354880 - 1354757
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||||    
T  1354880 ggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcg 1354785  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||  |||||||| |||||||||||    
T  1354784 ggagctctagtgcaccgggttgcccttt 1354757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 2166541 - 2166410
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||| |||||||   ||    
T  2166541 cacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataatggtgggaccccttcccggaccctatata 2166442  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    | ||||||||| |||||||| |||||||||||    
T  2166441 ttcgggagctttagtgcaccgggttgcccttt 2166410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 2178174 - 2178043
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||| |||||||   ||    
T  2178174 cacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataatggtgggaccccttcccggaccctatata 2178075  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    | ||||||||| |||||||| |||||||||||    
T  2178074 ttcgggagctttagtgcaccgggttgcccttt 2178043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 26097178 - 26097293
Alignment:
Q  143 tcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttc 242  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  ||  |||||||||||| ||||||||| ||||||||||||      
T  26097178 tcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tgaagggaccccttcccggaccctgcatatgcgggagctct 26097273  T
Q  243 agtgcaccaggttgcccttt 262  Q
    |||||||| |||||||||||    
T  26097274 agtgcaccgggttgcccttt 26097293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 7947497 - 7947370
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||| ||||||||||| |||| |||||||||  |||||||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||| |    
T  7947497 ggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaaggctgcgtacaatacacc-aaaatggtgggcccccttcccggaccttgcgtatgtg 7947399  T
Q  235 ggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||| |||||||  || |||||||||    
T  7947398 ggagctttagtgcacttggctgcccttta 7947370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 14553521 - 14553626
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||||||| ||| |||||||||||| | |||||||||||| ||| |||||||||||| ||||||||||||||| | ||||||| |||||||    
T  14553521 ggttcaagtcctggaaatagcttcttgtgtaaaaaatagggtaaggctgtgtataatacaccaaaactggtgggaccccttcgtagaccctgtgtatgcg 14553620  T
Q  235 ggagct 240  Q
    ||||||    
T  14553621 ggagct 14553626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 25557743 - 25557858
Alignment:
Q  143 tcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttc 242  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  ||  || ||||||||| ||||||||| ||||||||||||      
T  25557743 tcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tgaaggaaccccttcccggaccctgcatatgcgggagctct 25557838  T
Q  243 agtgcaccaggttgcccttt 262  Q
    |||||||| |||||||||||    
T  25557839 agtgcaccgggttgcccttt 25557858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 18277322 - 18277193
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||| || |||||||||||||||||||||||  |||||||||| || |||||  |||||  |||||||||||||||||||| ||| || ||||    
T  18277322 cacgggttcaaatcttggaaacagcctcttgtgtaaaaatcagggtaaggttgagtacagaacacc--aaatggtgggaccccttcctagactctacgta 18277225  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| | |||||| ||||| |||||    
T  18277224 tgcgggagctttactgcaccgggttgtccttt 18277193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 33138839 - 33138956
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||| |||||||| ||||| |||| ||||||| ||||||||||||||  |||||||||||||| || | |||||||| |||    
T  33138839 cacgggttcaagtcctggaaacaacctcttgtataaaaaacagagtaaggccgcgtacaatacacc--aaatggtgggacccttttccggaccctgtgta 33138936  T
Q  231 tgcgggagcttcagtgcacc 250  Q
    ||| | ||||| ||||||||    
T  33138937 tgcagtagctttagtgcacc 33138956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 13267797 - 13267860
Alignment:
Q  199 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13267797 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccgggttgcccttt 13267860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 255
Target Start/End: Complemental strand, 3815206 - 3815084
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||| || |||||||||| | | |||| | ||||||||||||||||  |||||||||||||| |||| | ||||| ||||    
T  3815206 cacgggttcaagtcctggaaacagactattgtgtaaaaaatatggtacgactgcgtacaatacacc--aaatggtgggaccctttcccgaaccctacgta 3815109  T
Q  231 tgcgggagcttcagtgcaccaggtt 255  Q
    ||||| ||||| |||||||| ||||    
T  3815108 tgcggaagctttagtgcaccgggtt 3815084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 12885967 - 12886048
Alignment:
Q  181 ctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||||| |||||||||||||||||||||  ||||||||||||| |||||||| |||||||| |||||||||||    
T  12885967 ctgcgtacaatacacaaaaaatggtgggaccccttcccagaccctgcgtatgtgggagctttagtgcaccgggttgcccttt 12886048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 140 - 248
Target Start/End: Original strand, 19340843 - 19340949
Alignment:
Q  140 aagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagc 239  Q
    ||||||| ||| ||||||||||||||||| ||||||||||| |||  |||||||||||||| || |||||||||||||||||||| |||||||||| |||    
T  19340843 aagtcctagaaccagcctcttgtgtaaaaaacagggtaaggttgca-acaatacaccaaaa-tgatgggaccccttcctggacccggcgtatgcggaagc 19340940  T
Q  240 ttcagtgca 248  Q
    || ||||||    
T  19340941 tttagtgca 19340949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 140 - 262
Target Start/End: Original strand, 1941870 - 1941990
Alignment:
Q  140 aagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagc 239  Q
    ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||||||| ||||||| | || |||||||||||     
T  1941870 aagtcatgtaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc--gaatggtgggaccccatcctggatcttgtgtatgcgggagt 1941967  T
Q  240 ttcagtgcaccaggttgcccttt 262  Q
    ||  |||||||  ||||||||||    
T  1941968 ttttgtgcaccgtgttgcccttt 1941990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 135 - 263
Target Start/End: Original strand, 17432350 - 17432484
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacaggg------taaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcg 228  Q
    ||||||||||||||||||| | |||||||||||| ||||||      |||||||| ||||||||||| |||||||||| ||||  |||| ||| |||| |    
T  17432350 ggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaagggtaaggctgtgtacaatacactaaaaatggtgagaccttttcccggatcctgtg 17432449  T
Q  229 tatgcgggagcttcagtgcaccaggttgcccttta 263  Q
     |||||||||||| |||||||| ||||||||||||    
T  17432450 catgcgggagctttagtgcaccgggttgcccttta 17432484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 24097587 - 24097712
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||| ||| ||||||| ||| ||||||||||| ||||| ||||||||||||||| |||||    |||||  |||||||||||||||| ||||||||||||    
T  24097587 cacgagtttaagtcctcgaaccagcctcttgtataaaaaacagggtaaggctgcttacaa----ccaaa--tggtgggaccccttcccggaccctgcgta 24097680  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||| ||||| ||||  ||||||||||||||    
T  24097681 tgcggaagctttagtgtcccaggttgcccttt 24097712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 6024239 - 6024332
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccc 224  Q
    ||||| ||||| |||| ||||||||||||||||||||| ||| |||||| |||||||||||||||||| |||| ||||||| ||||| ||||||    
T  6024239 cacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggtaagactgcgtacaatacaccaataatgatgggacctcttcccggaccc 6024332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 15866163 - 15866064
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    |||||||| ||||||||||||||||||  |||||| ||||||||| |||||||  ||||||||  ||||||||||||||||||| ||||||||||| |||    
T  15866163 gggttcaattcctggaaacagcctcttaagtaaaaaacagggtaaagctgcgt--aatacacc--aaatggtgggaccccttcccggaccctgcgtttgc 15866068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 135 - 255
Target Start/End: Original strand, 32579436 - 32579553
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||||||||||||||| || ||||| | | |||||| ||||||||||||| |||||  ||||||||||||||||  |||||||| ||||||    
T  32579436 ggttcaagtcctggaaacagcctctggtataaaa-atacggtaagcctgcgtacaataccccaaa--tggtgggaccccttcccagaccctgcatatgcg 32579532  T
Q  235 ggagcttcagtgcaccaggtt 255  Q
    ||||||| ||| | |||||||    
T  32579533 ggagctttagtactccaggtt 32579553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 12892064 - 12892144
Alignment:
Q  182 tgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||| |||||||||| |||||||||||||||||| |||||| || ||||||||||||| |||||||| |||||||||||    
T  12892064 tgcgtataatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 12892144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 23240943 - 23240837
Alignment:
Q  139 caagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggag 238  Q
    |||||||||||||||||||||||||||||  ||||||||||  ||||||||||| |||  || |||||||||||||||  ||||  ||||||||||||||    
T  23240943 caagtcctggaaacagcctcttgtgtaaa--acagggtaagtttgcgtacaatatacc--aattggtgggaccccttctaggacaatgcgtatgcgggag 23240848  T
Q  239 cttcagtgcac 249  Q
    ||| |||||||    
T  23240847 ctttagtgcac 23240837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 28007634 - 28007716
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcc 217  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||| |||||||||||||||||||  ||||| |||||||||||||    
T  28007634 cacgggttcaagtcctggaaagagcctcttgtgtaaa--acagggtcaggctgcgtacaatacacc--aaatgctgggaccccttcc 28007716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 8409249 - 8409311
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatac 193  Q
    ||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  8409249 cacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctgcgtacaatac 8409311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 3116210 - 3116129
Alignment:
Q  181 ctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||| ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||| ||| |||| | |||||||||    
T  3116210 ctgcgcacaatacaccaaaaatggtgggaccccttctcggaccttgcgtatgcgggagctttagtacaccggattgcccttt 3116129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 15865982 - 15865885
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatg 232  Q
    |||||||| ||||||||||||||||||  |||||| | |||||||| ||||||||  ||||||||||  |||||||||||||||||||||||||||| ||    
T  15865982 gggttcaattcctggaaacagcctcttacgtaaaaaaacagggtaaagctgcgta--atacaccaaa--tggtgggaccccttcctggaccctgcgtttg 15865887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 6808468 - 6808530
Alignment:
Q  200 aatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||    
T  6808468 aatggtgggaccccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgcccttt 6808530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 24734682 - 24734752
Alignment:
Q  165 aaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    |||| ||||||||||| ||||||||||||| |||||| ||||||||||||||| ||| |||||||||||||    
T  24734682 aaaaaacagggtaaggttgcgtacaatacaacaaaaaaggtgggaccccttcccggatcctgcgtatgcgg 24734752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 383837 - 383759
Alignment:
Q  183 gcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    |||||||||||||||||  | |||||||||||||   |||||||||||||||||||||||||| |||| ||||||||||||    
T  383837 gcgtacaatacaccaaa--ttgtgggaccccttctcagaccctgcgtatgcgggagcttcagtccaccgggttgcccttta 383759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 262
Target Start/End: Complemental strand, 23930246 - 23930127
Alignment:
Q  139 caagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggag 238  Q
    |||||| ||||||||| ||| ||||||||| ||| | ||  | |||||||||||||||| |  |||||||||||||||  ||||||||| ||||||||||    
T  23930246 caagtcatggaaacagtctcatgtgtaaaaaacaagata--gttgcgtacaatacaccaga--tggtgggaccccttcacggaccctgcttatgcgggag 23930151  T
Q  239 cttcagtgcaccaggttgcccttt 262  Q
    ||| ||||||||  ||||||||||    
T  23930150 ctttagtgcaccgagttgcccttt 23930127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 263
Target Start/End: Original strand, 12889436 - 12889563
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||| || |||||||||||||||| ||| |||||| |||||||| |||||||||||  ||| | ||||||||||| | |||||||  || || |    
T  12889436 ggttcaagtcttgaaaacagcctcttgtgttaaaaacagggcaaggctgcatacaatacacc-taaacgatgggacccctttccggaccctctgtgtgtg 12889534  T
Q  235 ggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||| |||||| | || |||||||||    
T  12889535 ggagctttagtgcatcgggctgcccttta 12889563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 263
Target Start/End: Original strand, 22967182 - 22967312
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaa------tacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    ||||||||| |||||||| | |||||||||||| | ||| ||||||||| |||||      |||||||||  ||||||||||||||| |||||||||| |    
T  22967182 gttcaagtcatggaaacaacttcttgtgtaaaa-ataggataaggctgcatacaaatacaatacaccaaa--tggtgggaccccttcttggaccctgcct 22967278  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||| |||| |||||||| ||| ||||||    
T  22967279 atgcgggagtttcattgcaccagattggccttta 22967312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 263
Target Start/End: Complemental strand, 23821211 - 23821081
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaa------tacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    ||||||||| |||||||| | |||||||||||| | ||| ||||||||| |||||      |||||||||  ||||||||||||||| |||||||||| |    
T  23821211 gttcaagtcatggaaacaacttcttgtgtaaaa-ataggataaggctgcatacaaatacaatacaccaaa--tggtgggaccccttcttggaccctgcct 23821115  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||| |||| |||||||| ||| ||||||    
T  23821114 atgcgggagtttcattgcaccagattggccttta 23821081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 258
Target Start/End: Complemental strand, 14975209 - 14975094
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||| |||||||||||||||||||||||||||||||| ||| ||            ||||||||||| |||||||||||||||||| | |||| || ||    
T  14975209 cacggattcaagtcctggaaacagcctcttgtgtaaaaaacaagg------------caatacaccaataatggtgggaccccttcccgaaccccgcata 14975122  T
Q  231 tgcgggagcttcagtgcaccaggttgcc 258  Q
    |||||||| || |||||||| |||||||    
T  14975121 tgcgggagttttagtgcaccgggttgcc 14975094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 11849063 - 11849159
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatg 232  Q
    ||||||||||| ||||||| |||||||||| ||| ||||| ||| | |||  |||||||||| |||||||||||||||||||| | || |||||||||    
T  11849063 ggttcaagtccaggaaacaacctcttgtgttaaaaacaggataaagttgcccacaatacacc-aaaatggtgggaccccttcccgaactctgcgtatg 11849159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 13905108 - 13905011
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||| |||||||||| ||||  |||||||||||||| ||||||||||||||| |||||| ||||  ||||||| |||||| |||| | ||||||||||    
T  13905108 cacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaaggctgcatacaattcacc--aaatggt-ggaccctttcccgaaccctgcgta 13905012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 4136646 - 4136567
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggac 210  Q
    ||||||||||||||||  ||||| | |||||||||||| ||||||||||| |||||| | ||||| |||| |||||||||    
T  4136646 cacgggttcaagtcctaaaaacaacatcttgtgtaaaatacagggtaaggttgcgtagagtacactaaaattggtgggac 4136567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 261
Target Start/End: Complemental strand, 2755549 - 2755422
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtat--g 232  Q
    |||||||||| || ||||| |||||| |   ||| | ||| ||||||||||||||||||||||||||||||||||  ||||||   | ||||| |||  |    
T  2755549 ggttcaagtcttgcaaacatcctcttataccaaaaataggctaaggctgcgtacaatacaccaaaaatggtgggagtccttcccaaatcctgcatatgcg 2755450  T
Q  233 cgggagcttcagtgcaccaggttgccctt 261  Q
    ||||||||| |||||||| ||||||||||    
T  2755449 cgggagctttagtgcacc-ggttgccctt 2755422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 9671196 - 9671084
Alignment:
Q  149 aaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgca 248  Q
    |||||||||||||||||||| ||||||||||||||| |||  |||| | |||||||| ||||||||| | | |||||||  || ||||||||| | ||||    
T  9671196 aaacagcctcttgtgtaaaaaacagggtaaggctgcctactttacatc-aaaatggtaggacccctttccgaaccctgcaaatacgggagctttaatgca 9671098  T
Q  249 ccaggttgcccttt 262  Q
     | || ||||||||    
T  9671097 tcgggctgcccttt 9671084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 10734965 - 10734904
Alignment:
Q  202 tggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||| |||| || |||||||||    
T  10734965 tggtgggcccccttcccggaccctgcgtatgcgggagctttagtccaccgggctgcccttta 10734904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 30786427 - 30786378
Alignment:
Q  209 accccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcc 258  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  30786427 accccttcctggaccgtgcgtatgcgggagctttagtgcaccgggttgcc 30786378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 32068107 - 32068229
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    ||||||||| |||||||   ||||||||||||| ||||| ||| ||||  ||||||||||| ||||||||||||||||||  ||||   |||||||||      
T  32068107 gttcaagtcttggaaac---ctcttgtgtaaaaaacaggataatgctgtttacaatacacc-aaaatggtgggacccctttttggattttgcgtatgcta 32068202  T
Q  236 gagcttcagtgcaccaggttgcccttt 262  Q
    |||| | ||||||||||  ||||||||    
T  32068203 gagcgttagtgcaccagactgcccttt 32068229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 11395836 - 11395896
Alignment:
Q  202 tggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||| |||| || |||||||||    
T  11395836 tggtgggaccccttcccggatcctgcgtatgcgggagctttagtccacc-ggctgcccttta 11395896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 20400677 - 20400737
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacac 195  Q
    |||||||||  ||||||||  ||||||||||||| |||||||||| ||||||||| |||||    
T  20400677 ggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaagactgcgtacagtacac 20400737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 24751176 - 24751101
Alignment:
Q  158 cttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||| | |||||||| |||||||||||||| | ||||||||| |||||||||  | ||| ||||||||||    
T  24751176 cttgtgtaaaaaatagggtaagactgcgtacaataca-ctaaaatggtgagaccccttcacgaaccgtgcgtatgcg 24751101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 17448330 - 17448389
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaa 190  Q
    |||||||||||||  || ||||| | | |||||||||| |||||||||||||||||||||    
T  17448330 cacgggttcaagttttgaaaacaacattttgtgtaaaaaacagggtaaggctgcgtacaa 17448389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 14341166 - 14341134
Alignment:
Q  164 taaaagacagggtaaggctgcgtacaatacacc 196  Q
    ||||| |||||||||||||||||||||||||||    
T  14341166 taaaaaacagggtaaggctgcgtacaatacacc 14341134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 3e-54; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 38879587 - 38879718
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  38879587 cacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgta 38879686  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  38879687 tgcgggagctttagtgcaccgggttgcccttt 38879718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 41014325 - 41014453
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||| || ||    
T  41014325 cacgggttcaagtcctggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcctggaccccgcata 41014421  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  41014422 tgcgggagctttagtgcaccgggttgcccttt 41014453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 43334208 - 43334339
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  43334208 cacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcg- 43334306  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||| |||||||| |||||||||||    
T  43334307 atgcgggagctttagtgcaccgggttgcccttt 43334339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 4619235 - 4619104
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||    
T  4619235 cacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcata 4619136  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||| |||||| |||||||| |||||||||||    
T  4619135 tgcgagagctttagtgcaccgggttgcccttt 4619104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 134 - 263
Target Start/End: Complemental strand, 13801895 - 13801766
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || |||||    
T  13801895 gggttcaagtcctggaagcagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 13801796  T
Q  234 gggagcttcagtgcaccaggttgcccttta 263  Q
    | |||||| |||||||| ||||||||||||    
T  13801795 gagagctttagtgcaccgggttgcccttta 13801766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 24448896 - 24449025
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  24448896 cacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccggaccctgcgta 24448993  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||| ||||||| |||||||| |||||||||||    
T  24448994 tgcaggagctttagtgcaccgggttgcccttt 24449025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 8170111 - 8169984
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||    
T  8170111 cacgggttcaagtcctggaaacagccttttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcata 8170016  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||| ||||||||||| |||||||||||    
T  8170015 tgcgggagtttcagtgcaccgggttgcccttt 8169984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 32703430 - 32703557
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||    
T  32703430 cacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcata 32703525  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| |||||||||||    
T  32703526 tgcgggagctctagtgcaccgggttgcccttt 32703557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 27328762 - 27328868
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||    
T  27328762 ggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgaaccctgcgtatgcg 27328861  T
Q  235 ggagctt 241  Q
    |||||||    
T  27328862 ggagctt 27328868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 144 - 261
Target Start/End: Original strand, 20135623 - 20135740
Alignment:
Q  144 cctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttca 243  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||||| |||||||||    
T  20135623 cctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcaggagcttca 20135722  T
Q  244 gtgcaccaggttgccctt 261  Q
    ||||||| ||||||||||    
T  20135723 gtgcaccgggttgccctt 20135740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 35710319 - 35710446
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||  ||||||||||||||||||| ||| | ||| ||    
T  35710319 cacgggttcaagtcctggaaacagcctcttgtgtaaa--atagggtaaggctgcgttcaatacacc--aaatggtgggaccccttcccggaacatgcata 35710414  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| |||||||||||    
T  35710415 tgcgggagctctagtgcaccgggttgcccttt 35710446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 130 - 249
Target Start/End: Complemental strand, 19143072 - 19142956
Alignment:
Q  130 ccacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||  |||||||||||||||| ||||| |||||    
T  19143072 ccacaggttcaagtcctggaaacaacctcttgtgtaaaa-acagggtaaggctgcgtacagtacaccaaa--tggtgggaccccttcccggaccatgcgt 19142976  T
Q  230 atgcgggagcttcagtgcac 249  Q
    ||||||||| || |||||||    
T  19142975 atgcgggagatttagtgcac 19142956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 43574612 - 43574729
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||| ||||||||||||||||||  |||||||||| || ||||||||||||||||||||||| |||  ||||||||||||||||||| ||||||||||||    
T  43574612 cacgtgttcaagtcctggaaacaatctcttgtgtagaaaacagggtaaggctgcgtacaatatacc--aaatggtgggaccccttcccggaccctgcgta 43574709  T
Q  231 tgcgggagcttcagtgcacc 250  Q
    ||||||||||| || |||||    
T  43574710 tgcgggagctttagagcacc 43574729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 28516563 - 28516433
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||||||| | ||||||||||||||| ||||  ||||||||| |    
T  28516563 cacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctagggctgcgtacaatacatc-aaaatggtgggacccattcccagaccctgcgca 28516465  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||| ||||||| |||| |||||||||||||||    
T  28516464 tgcaggagctttagtggaccaggttgcccttt 28516433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 150 - 263
Target Start/End: Complemental strand, 16880757 - 16880646
Alignment:
Q  150 aacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcac 249  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||  |||||||| |||| ||||| ||||| ||||||||||||||||| |||||||    
T  16880757 aacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc--aaatggtgtgaccacttcccggaccatgcgtatgcgggagctttagtgcac 16880660  T
Q  250 caggttgcccttta 263  Q
    | |||| |||||||    
T  16880659 cgggtttcccttta 16880646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 7368413 - 7368528
Alignment:
Q  140 aagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagc 239  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| |||| ||||||    
T  7368413 aagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaat--tggtgggaccccttcccggaccctgcatatgtgggagc 7368508  T
Q  240 ttcagtgcaccaggttgccc 259  Q
    |  |||||||| ||||||||    
T  7368509 tctagtgcaccgggttgccc 7368528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 263
Target Start/End: Complemental strand, 7097870 - 7097759
Alignment:
Q  149 aaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgca 248  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||| |||||||||| | ||||||||||||||||||||| ||||||    
T  7097870 aaacagcctcttgtgtaaaa-acagggtaaggttgcgtacaatacaccaaa--tggtgagaccccttcccgaaccctgcgtatgcgggagctttagtgca 7097774  T
Q  249 ccaggttgcccttta 263  Q
    ||| | |||||||||    
T  7097773 ccatgctgcccttta 7097759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 134 - 261
Target Start/End: Complemental strand, 12006455 - 12006329
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||| |||||||| |||||| ||||||| | ||||||||||| | ||||||||||||| ||||||||||||||||||  |||||||| |||||    
T  12006455 gggttcaagtc-tggaaacaacctcttatgtaaaaaatagggtaaggctccatacaatacaccaataatggtgggaccccttcccagaccctgcctatgc 12006357  T
Q  234 gggagcttcagtgcaccaggttgccctt 261  Q
    |||||||| ||||||||  |||||||||    
T  12006356 gggagctttagtgcaccgtgttgccctt 12006329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 209051 - 208939
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||      
T  209051 gttcaagtcctggcaacaacctcttgtgtaaaa-acagggtaaggctgcattcaatacaccaaaa-tggtgggaccccttcctggaccctgggtatgcaa 208954  T
Q  236 gagcttcagtgcacc 250  Q
    |||||| ||||||||    
T  208953 gagctttagtgcacc 208939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 263
Target Start/End: Complemental strand, 12575779 - 12575659
Alignment:
Q  143 tcctggaaacagcctcttgtgtaaa-agacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagctt 241  Q
    ||||||||||||||||||| ||||| | ||||| ||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  12575779 tcctggaaacagcctcttgcgtaaataaacaggctaaagttgcgtacaatacaccaaaa-tggtgggaccccttcctggaccctgcgtatgcaggagctt 12575681  T
Q  242 cagtgcaccaggttgcccttta 263  Q
      ||||||| || |||||||||    
T  12575680 tggtgcaccgggctgcccttta 12575659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 145 - 262
Target Start/End: Original strand, 29334415 - 29334531
Alignment:
Q  145 ctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcag 244  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||| | ||||||||||||| |||| |||||||||||||| |||| ||| |     
T  29334415 ctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacacc-agaatggtgggacccattcccggaccctgcgtatgtgggatctttaa 29334513  T
Q  245 tgcaccaggttgcccttt 262  Q
    |||||| || ||||||||    
T  29334514 tgcaccgggctgcccttt 29334531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 22600461 - 22600568
Alignment:
Q  132 acgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtat 231  Q
    ||||||||||||||||||||||   | |||||||||| |||||||||||||| ||||||||||||  ||||||||||| ||||||| ||| |||||||||    
T  22600461 acgggttcaagtcctggaaacaatattttgtgtaaaacacagggtaaggctgtgtacaatacacc--aaatggtgggatcccttcccggatcctgcgtat 22600558  T
Q  232 gcgggagctt 241  Q
    ||||||||||    
T  22600559 gcgggagctt 22600568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 133 - 268
Target Start/End: Original strand, 1565439 - 1565572
Alignment:
Q  133 cgggttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtat 231  Q
    ||||||||||||||||||||| ||||||| |||||| | ||   |||||||||||||||| |||||||  ||| |||||||||||| ||||||||| |||    
T  1565439 cgggttcaagtcctggaaacaacctcttgagtaaaaaaacatattaaggctgcgtacaatgcaccaaa--tggcgggaccccttcccggaccctgcatat 1565536  T
Q  232 gcgggagcttcagtgcaccaggttgccctttactcaa 268  Q
    | |||||||| |||||||| |||||||||||||||||    
T  1565537 gtgggagctt-agtgcaccgggttgccctttactcaa 1565572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 135 - 263
Target Start/End: Original strand, 22187295 - 22187423
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||| ||||||||||||||||||||||||||||| ||| | |||| |||||||||||||||||||||   || ||||||||||   ||||| | |||||     
T  22187295 ggtttaagtcctggaaacagcctcttgtgtaaaaaacatgataagactgcgtacaatacaccaaaaacaatgagaccccttcccaaaccctacatatgca 22187394  T
Q  235 ggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||| |||||| ||||||||||||||    
T  22187395 ggagctttagtgcatcaggttgcccttta 22187423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 131 - 250
Target Start/End: Complemental strand, 42924963 - 42924842
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctgg--accctgcg 228  Q
    |||| |||||||||||| ||||| | |||||||||||| ||||||||||| |||||||||||||||||||||| ||| | |||||||  |  ||||||||    
T  42924963 cacgagttcaagtcctgaaaacaacatcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaaaaatgatggaatcccttcccagacaccctgcg 42924864  T
Q  229 tatgcgggagcttcagtgcacc 250  Q
    ||||||| ||||| ||||||||    
T  42924863 tatgcggaagctttagtgcacc 42924842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 2838802 - 2838899
Alignment:
Q  148 gaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgc 247  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||  ||||||||||||||||||||| || ||||    
T  2838802 gaaacagcatcttgtgtaaaa-acagggtaaggctgcgtacaatacacc--aaatggtgggatcccttctcggaccctgcgtatgcgggagcatcggtgc 2838898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 34154903 - 34154813
Alignment:
Q  171 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||||| ||||  |||||||| ||||||||||||    
T  34154903 cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcggtagctctagtgcaccgggttgcccttta 34154813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 1405193 - 1405322
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||| |||||| | ||||| | || |||||  |||||||||||||||  |||||||||||||| |||||| ||||||| ||    
T  1405193 cacgggttcaagtcctggaaacaacctcttatataaaaaatagagtaagtttgcgtacaatacacc--aaatggtgggaccctttcctgaaccctgcata 1405290  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  ||| |||| | |||||||||    
T  1405291 tgcgggagctctagtacaccggattgcccttt 1405322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 1850646 - 1850762
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||| ||||| | |||||||||||||| ||||  ||||| ||||||||||||| ||||  |||||||||| |||||||||||||||| |    
T  1850646 cacgggttcaagtcccggaaataacctcttgtgtaaaa-acagaataagggtgcgtacaatacatcaaa--tggtgggaccacttcctggaccctgcgga 1850742  T
Q  231 tgcgggagcttcagtgcacc 250  Q
    ||||| ||||| ||||||||    
T  1850743 tgcggaagctttagtgcacc 1850762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 39301129 - 39301235
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||| ||| |||| ||||||||||| || ||||||||||| |||||| ||| ||||||||| ||||||||||||||| ||||||| ||||    
T  39301129 cacgggttcaagtcttgggaacaacctcttgtgtataaaacagggtaaggatgcgtataatgcaccaaaaa-ggtgggaccccttcccggaccctccgta 39301227  T
Q  231 tgcgggag 238  Q
    || |||||    
T  39301228 tgtgggag 39301235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 16957374 - 16957449
Alignment:
Q  185 gtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  16957374 gtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 16957449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 25622524 - 25622595
Alignment:
Q  191 tacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| | |||||||||    
T  25622524 tacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggattgcccttt 25622595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 241
Target Start/End: Complemental strand, 24323829 - 24323726
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    |||||||| ||||||||| |||||||||||||||||||||||||  |||||| ||||| ||  |||| ||||||||||||||  |||||||  |||||||    
T  24323829 gttcaagttctggaaacaacctcttgtgtaaaagacagggtaagcttgcgtataatactcc--aaatagtgggaccccttcccagaccctgtatatgcgg 24323732  T
Q  236 gagctt 241  Q
    ||||||    
T  24323731 gagctt 24323726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 241
Target Start/End: Complemental strand, 24360453 - 24360350
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    |||||||| ||||||||| |||||||||||||||||||||||||  |||||| ||||| ||  |||| ||||||||||||||  |||||||  |||||||    
T  24360453 gttcaagttctggaaacaacctcttgtgtaaaagacagggtaagcttgcgtataatactcc--aaatagtgggaccccttcccagaccctgtatatgcgg 24360356  T
Q  236 gagctt 241  Q
    ||||||    
T  24360355 gagctt 24360350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 140 - 263
Target Start/End: Complemental strand, 5873441 - 5873321
Alignment:
Q  140 aagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagc 239  Q
    ||||| ||||||||||||||||||||||| | |||||||||||  ||||| ||||||||   ||||||||| ||| || |||| ||||||||||||||||    
T  5873441 aagtcgtggaaacagcctcttgtgtaaaa-atagggtaaggctaagtacactacaccaat--tggtgggactcctccccggacactgcgtatgcgggagc 5873345  T
Q  240 ttcagtgcaccaggttgcccttta 263  Q
    || |||||| | || |||||||||    
T  5873344 tttagtgcatcgggatgcccttta 5873321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 37024683 - 37024626
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaa 190  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  37024683 cacgggttcaagtcctggaaacagcctcttgtgtaaa--acagggtaaggctgcgtacaa 37024626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 41425954 - 41426055
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||| ||||||||| | | |||||||||| ||||||||||||||| |||||||||||  || ||||||||||||||||  ||| ||||| |    
T  41425954 cacgggttcaagttctggaaacaacttattgtgtaaaaaacagggtaaggctgcatacaatacacc--aattggtgggaccccttcccagactctgcgga 41426051  T
Q  231 tgcg 234  Q
    ||||    
T  41426052 tgcg 41426055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 22025552 - 22025601
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctg 183  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22025552 gggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctg 22025601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 263
Target Start/End: Original strand, 30006337 - 30006461
Alignment:
Q  137 ttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcggg 236  Q
    ||||||||| | ||||| |||||| | ||||  |||||||||||||| ||||| ||||| |||  |||||||||||||||| ||  |||  |||||||||    
T  30006337 ttcaagtccggaaaacaacctcttatataaacaacagggtaaggctgtgtacattacactaaa--tggtgggaccccttcccggggcctatgtatgcggg 30006434  T
Q  237 agcttcagtgcaccaggttgcccttta 263  Q
    ||||| |||||||| ||||||| ||||    
T  30006435 agctttagtgcaccgggttgcctttta 30006461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 3771379 - 3771474
Alignment:
Q  165 aaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||| |||||||||||||| | ||||||||||||   |||||||||||||||| |||| ||| ||||| |||||||| |||||||| || ||||||||    
T  3771379 aaaaaacagggtaaggctgtgaacaatacaccaat--tggtgggaccccttcccggactctgtgtatgtgggagctttagtgcaccgggctgcccttt 3771474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 10306548 - 10306495
Alignment:
Q  187 acaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagctt 241  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  10306548 acaatacaccaaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctt 10306495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 12477205 - 12477132
Alignment:
Q  176 taaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcacc 250  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||  ||||||||||  |||||| ||||||||    
T  12477205 taaggctgcgtacaatacaccaaaa-tggtgggaccccttcccggattctgcgtatgcaagagctttagtgcacc 12477132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 23974786 - 23974840
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcg 185  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  23974786 cacgggttcaagtcctggaaacaacctcttgtgtaaaaaagagggtaaggctgcg 23974840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 22907990 - 22907913
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggacccct 214  Q
    ||||||||||||  ||||||||||||||||||||| |||| |||||| ||| |||||||||||  ||||||||||||||||    
T  22907990 gggttcaagtccaagaaacagcctcttgtgtaaaa-acagagtaaggttgcatacaatacacc--aaatggtgggacccct 22907913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 136 - 240
Target Start/End: Complemental strand, 34074686 - 34074584
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    ||||||||||| ||||||||||||||||||||| |||  |||||| ||||| |||||||||  ||||||  || ||||||||   |||||||||||| ||    
T  34074686 gttcaagtcctagaaacagcctcttgtgtaaaaaacacagtaaggttgcgttcaatacacc--aaatggcagggccccttcccaaaccctgcgtatgggg 34074589  T
Q  236 gagct 240  Q
    |||||    
T  34074588 gagct 34074584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 16028683 - 16028624
Alignment:
Q  203 ggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||||| ||||||||| ||||||||||||  |||||||| |||||||||||    
T  16028683 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 16028624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 21784396 - 21784335
Alignment:
Q  198 aaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccc 259  Q
    |||||||||||||||||| | |||||||||||||||||||| || ||||||||  |||||||    
T  21784396 aaaatggtgggacccctttccggaccctgcgtatgcgggaggtttagtgcaccgagttgccc 21784335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 30877623 - 30877563
Alignment:
Q  203 ggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||||||||| ||||||||| |||| |||||||  |||||||| ||||||||||||    
T  30877623 ggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgcccttta 30877563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 39801591 - 39801647
Alignment:
Q  202 tggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcc 258  Q
    ||||||||||||||||  |||||| ||||||||||||||| |||||||| |||||||    
T  39801591 tggtgggaccccttcccagaccctacgtatgcgggagctttagtgcaccgggttgcc 39801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 11657785 - 11657699
Alignment:
Q  175 gtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||| ||||||||||||||| |||||||||||||||| | |||||||  | |||||| ||| ||| |||| || ||||||||    
T  11657785 gtaaggctgcatacaatacaccaaaa-tggtgggaccccttcccgaaccctgcacacgcgggaactttagttcaccgggctgcccttt 11657699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 32354211 - 32354262
Alignment:
Q  211 cccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||| |||||||| |||||||||||||| |||||||| |||||||||||    
T  32354211 cccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgcccttt 32354262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 21542530 - 21542489
Alignment:
Q  199 aaatggtgggaccccttcctggaccctgcgtatgcgggagct 240  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  21542530 aaatggtgggaccccttcccggactctgcgtatgcgggagct 21542489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 39079827 - 39079764
Alignment:
Q  185 gtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcac 249  Q
    |||||||||||||||| |||||||||||||||| ||||| || |||| |||||| || |||||||    
T  39079827 gtacaatacaccaaaa-tggtgggaccccttcccggaccatgtgtatacgggagttttagtgcac 39079764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 13774921 - 13774988
Alignment:
Q  181 ctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcacc 250  Q
    ||||| |||||||||||||  |||  ||| ||||| | ||||||||||||||||||||||| ||||||||    
T  13774921 ctgcgcacaatacaccaaa--tggcaggatccctttccggaccctgcgtatgcgggagctttagtgcacc 13774988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 19438758 - 19438800
Alignment:
Q  219 ggaccctgcgtatgcgggagcttcagtgcaccaggttgccctt 261  Q
    ||||||||| ||||||||||||  |||||||||||||||||||    
T  19438758 ggaccctgcatatgcgggagctctagtgcaccaggttgccctt 19438800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 4654479 - 4654426
Alignment:
Q  198 aaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcacca 251  Q
    |||||||||||| ||||||  | ||||||| ||||||||||||| |||||||||    
T  4654479 aaaatggtgggatcccttctcgaaccctgcatatgcgggagctttagtgcacca 4654426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 29184103 - 29184062
Alignment:
Q  220 gaccctgcgtatgcgggagcttcagtgcaccaggttgccctt 261  Q
    |||| ||||||||||||||||| |||||||| ||||||||||    
T  29184103 gaccatgcgtatgcgggagctttagtgcaccgggttgccctt 29184062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 31694233 - 31694107
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||| || ||| || | || |||||||| | ||| ||| ||||| ||||||||||| |   || |||||| ||||||  |||| ||||||||||    
T  31694233 ggttcaagtcttgaaaaaagtcactcgtgtaaaaaataggctaaagctgcatacaatacacctat--tgatgggactccttcccagaccttgcgtatgcg 31694136  T
Q  235 ggagcttcagtgcaccaggttgcccttta 263  Q
    |||| || ||||||||||  |||||||||    
T  31694135 ggagatttagtgcaccagactgcccttta 31694107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 10943900 - 10943845
Alignment:
Q  206 gggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||| |||||||||  |||||||||||| |||||||| || ||||||||    
T  10943900 gggaccccttcccggaccctgca-atgcgggagctttagtgcaccgggctgcccttt 10943845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 19093884 - 19093948
Alignment:
Q  198 aaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||  ||||||| || ||||||||||||||  ||||||| |||||||| || ||||||||    
T  19093884 aaaatggtatgacccctacccggaccctgcgtatgttggagctttagtgcaccgggctgcccttt 19093948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 24313699 - 24313572
Alignment:
Q  136 gttcaagtcctggaaacagcctc-ttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctgg-accctgcgtatgc 233  Q
    ||||||||| |||||||| || | || |||| || ||| | ||||| ||||| ||||||||||||| |||||||||||||||| ||  || || ||||||    
T  24313699 gttcaagtcttggaaacaacccccttctgtagaaaacaagataaggttgcgttcaatacaccaaaa-tggtgggaccccttcccggcgccatgtgtatgc 24313601  T
Q  234 gggagcttcagtgcaccaggttgcccttt 262  Q
     | ||||| |||||||| || ||||||||    
T  24313600 tgtagctttagtgcaccgggctgcccttt 24313572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 24356036 - 24355909
Alignment:
Q  136 gttcaagtcctggaaacagcctc-ttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctgg-accctgcgtatgc 233  Q
    ||||||||| |||||||| || | || |||| || ||| | ||||| ||||| ||||||||||||| |||||||||||||||| ||  || || ||||||    
T  24356036 gttcaagtcttggaaacaacccccttctgtagaaaacaagataaggttgcgttcaatacaccaaaa-tggtgggaccccttcccggcgccatgtgtatgc 24355938  T
Q  234 gggagcttcagtgcaccaggttgcccttt 262  Q
     | ||||| |||||||| || ||||||||    
T  24355937 tgtagctttagtgcaccgggctgcccttt 24355909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 8e-52; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 39461125 - 39460994
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  39461125 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgagaccccttcccggaccctgcgta 39461026  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  39461025 tgcgggagctttagtgcaccgggttgcccttt 39460994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 36720802 - 36720931
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  36720802 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccggaccctgcgta 36720899  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||| ||||| |||||||| |||||||||||    
T  36720900 tgcggaagctttagtgcacccggttgcccttt 36720931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 13160708 - 13160837
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  13160708 cacgggttcaagtcctagaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgta 13160804  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||||||||||| || ||||||||||||    
T  13160805 tgcgggagcttcagtgcgccgggttgcccttta 13160837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 28817755 - 28817626
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||| ||||||||||||    
T  28817755 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc--caatggtgggaccccttcccggaccctgcgta 28817658  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||| | |||||||||||    
T  28817657 tgcgggagctttagtgcatcgggttgcccttt 28817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 35261685 - 35261814
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  35261685 cacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaaa--tggtgggaccccttcctggaccctgcgta 35261782  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  35261783 tgcgggagctttagtgcaccgggttgcccttt 35261814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 44530155 - 44530284
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  44530155 cacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcctggaccctgcgta 44530252  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| ||||| |||||    
T  44530253 tgcgggagctttagtgcaccgggttgaccttt 44530284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 6760828 - 6760959
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||  |||||| || ||    
T  6760828 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtacaatacaccaataatggtgggaccccttctcggaccccgcata 6760927  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  6760928 tgcgggagctttagtgcaccgggttgcccttt 6760959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 45071271 - 45071398
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||| ||||||    
T  45071271 cacgggttcaagttctggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccttgcgta 45071367  T
Q  231 tgcgggagcttcagtgcaccaggttgccctt 261  Q
    |||||||||||||||||||| ||||||||||    
T  45071368 tgcgggagcttcagtgcaccgggttgccctt 45071398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 131 - 249
Target Start/End: Complemental strand, 44781635 - 44781517
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||  |||||||||||    
T  44781635 cacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaaggctgtgtacaatacaccaaaaatgttgggaccccgtcccagaccctgcgta 44781536  T
Q  231 tgcgggagcttcagtgcac 249  Q
    ||||||||||| |||||||    
T  44781535 tgcgggagctttagtgcac 44781517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 134 - 262
Target Start/End: Complemental strand, 7136655 - 7136527
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||| |||||| || |||||    
T  7136655 gggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 7136556  T
Q  234 gggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||| |||||||| |||| ||||||    
T  7136555 gggagctttagtgcaccgggttacccttt 7136527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 20869941 - 20870060
Alignment:
Q  143 tcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttc 242  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || |||||||||||||     
T  20869941 tcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggagcttt 20870040  T
Q  243 agtgcaccaggttgcccttt 262  Q
    |||||||| |||||||||||    
T  20870041 agtgcaccgggttgcccttt 20870060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 12670377 - 12670250
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||    
T  12670377 cacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcata 12670282  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| |||| ||||||    
T  12670281 tgcgggagctctagtgcaccgggttacccttt 12670250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 131 - 256
Target Start/End: Complemental strand, 20284202 - 20284075
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagaca--gggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcg 228  Q
    |||||||||||||||||||||||||||||||| ||||| | |  |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  20284202 cacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcg 20284103  T
Q  229 tatgcgggagcttcagtgcaccaggttg 256  Q
    |||||||||| || |||||||| |||||    
T  20284102 tatgcgggagttttagtgcaccgggttg 20284075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 26954138 - 26954270
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||  ||||  || |    
T  26954138 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagacctcgcat 26954237  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||| |||||||  |||||||||||    
T  26954238 atgcgggagctttagtgcactgggttgcccttt 26954270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 29521814 - 29521685
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||  ||||||||||| ||| |||  |||||||||||    
T  29521814 cacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgcgtacaatacacc--aaatggtgggaacccatcccagaccctgcgta 29521717  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||| ||||    
T  29521716 tgcgggagctttagtgcaccgggttgctcttt 29521685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 29877111 - 29877232
Alignment:
Q  142 gtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagctt 241  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |    
T  29877111 gtcctggaaacagccttttgtgtaaaaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccggaccctgcgtatgcgggagcgt 29877208  T
Q  242 cagtgcaccaggttgccctttact 265  Q
     ||||||||||| |||||| ||||    
T  29877209 tagtgcaccaggctgccctatact 29877232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 131 - 256
Target Start/End: Complemental strand, 21070831 - 21070703
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagaca---gggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgc 227  Q
    |||||||||||||||||||||||||||||||| ||||| | |   |||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  21070831 cacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgc 21070732  T
Q  228 gtatgcgggagcttcagtgcaccaggttg 256  Q
    ||||||||||| || |||||||| |||||    
T  21070731 gtatgcgggagttttagtgcaccgggttg 21070703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 2626525 - 2626657
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaaga---cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgc 227  Q
    |||||||||||||||||||||||||||||||||||||| |   ||||||||| |||||||||||||||||||  || |||||||||||||  ||||||||    
T  2626525 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacaccaaa--tgatgggaccccttcccagaccctgc 2626622  T
Q  228 gtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
     |||||||||||||||||||||||| |||||||||    
T  2626623 atatgcgggagcttcagtgcaccagattgcccttt 2626657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 30454224 - 30454097
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||||||||| ||||||||||  |||||||||||||||| ||||||||| ||    
T  30454224 cacgggttcaagtcctggaaacagcctcttgtgtaaaa--caaggtaaggctgcgtacgatacaccaaa--tggtgggaccccttcccggaccctgcata 30454129  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| |||||||||||    
T  30454128 tgcgggagctctagtgcaccgggttgcccttt 30454097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 5135418 - 5135290
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||  ||||||||||||||||||| ||||||||||||    
T  5135418 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaagagggtaaggctgtgtacaatacacc--aaatggtgggaccccttcccggaccctgcgta 5135321  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||| |||||||  ||||||| || ||||||||    
T  5135320 tgcaggagctt-tgtgcaccgggctgcccttt 5135290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 25250533 - 25250659
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    |||||||||||||||||||||| |||||||||| | |||||| |||||||||||||||||||| |||||||||||||||||| | |||| || |||||||    
T  25250533 gttcaagtcctggaaacagcctattgtgtaaaaaatagggtatggctgcgtacaatacaccaataatggtgggaccccttcccgaaccccgcatatgcgg 25250632  T
Q  236 gagcttcagtgcaccaggttgcccttt 262  Q
    ||| || |||||||| |||||||||||    
T  25250633 gagatttagtgcaccgggttgcccttt 25250659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 12625895 - 12626025
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||||| |||||||||||||||| |||||||||||||| | ||||||||| |||| ||||||||||||||  |||||||||||| ||| |||||||||||    
T  12625895 cacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggtaagactgcatacaatacaccaaa--tggtgggaccccctcccggaccctgcgt 12625992  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||| |||||||| |||||||||||    
T  12625993 atgcgggagctttagtgcaccgggttgcccttt 12626025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 17823582 - 17823716
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||||||||||||||  |||| |||| ||||||| ||||||||  ||||||||| ||||||||| | ||||||| ||    
T  17823582 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggataagactgcgtaaaatacacc--aaatggtggaaccccttcccgaaccctgcata 17823679  T
Q  231 tgcgggagcttcagtgcaccaggttgccctttactca 267  Q
    ||| ||||||| |||||||| ||||||||||||||||    
T  17823680 tgcaggagctttagtgcaccgggttgccctttactca 17823716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 8897893 - 8897764
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||| |||||||||||||| || ||||||||||| | ||||||||||| |||||||||||||  ||||||||||||||||||| ||||||||| ||    
T  8897893 cacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtacaatacacc--aaatggtgggaccccttcccggaccctgcata 8897796  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| | |||||| |||||||||||    
T  8897795 tgcgggagctttactgcacccggttgcccttt 8897764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 131 - 258
Target Start/End: Complemental strand, 18164888 - 18164764
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||   | || ||||  |||| ||||||||||||    
T  18164888 cacgggttcaagtcctggaaacagcctcttgtgtaaaa-acagggtaaggttgcgtacaatacaccaaag--gatgtgaccatttcccggaccctgcgta 18164792  T
Q  231 tgcgggagcttcagtgcaccaggttgcc 258  Q
    ||||||||||| |||||||| |||||||    
T  18164791 tgcgggagctttagtgcaccgggttgcc 18164764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 8484064 - 8483950
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    |||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||  || |||||||||||| |||  ||||||||||||||    
T  8484064 gggttcaagtcctggaaacaacctcttgtgtaaaaaacagggcaaggctgcgtacaatacacc--aattggtgggaccccatcccagaccctgcgtatgc 8483967  T
Q  234 gggagcttcagtgcacc 250  Q
    |||||||| || |||||    
T  8483966 gggagctttagggcacc 8483950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 136 - 249
Target Start/End: Complemental strand, 17251001 - 17250888
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||||||||| ||||||||||||| |||| | ||||||||||||  |    
T  17251001 gttcaagtcctggaagcagcctcttgtgtaaaaaacaggttaaggcagcgtacaatacaccaataatggtgggaccctttcccgaaccctgcgtatgaag 17250902  T
Q  236 gagcttcagtgcac 249  Q
    |||||| |||||||    
T  17250901 gagctttagtgcac 17250888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 151 - 263
Target Start/End: Original strand, 16225045 - 16225157
Alignment:
Q  151 acagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcacc 250  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||| |||||||||| ||||||| |||||| || ||||||||||||| ||||||||    
T  16225045 acagcctcttatgtaaaaaacagggtaagactgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggagctttagtgcacc 16225144  T
Q  251 aggttgcccttta 263  Q
     ||||| ||||||    
T  16225145 gggttgtccttta 16225157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 24365189 - 24365080
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||| |||||||||||||  |||||||||||||||| |||||||||||    
T  24365189 cacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggtaaggctgcgaacaatacaccaaa--tggtgggaccccttcccggaccctgcgt 24365092  T
Q  230 atgcgggagctt 241  Q
    ||| ||||||||    
T  24365091 atgtgggagctt 24365080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 259
Target Start/End: Complemental strand, 44742643 - 44742521
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    |||||||| |||||||||  ||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| || ||||||    
T  44742643 gttcaagttctggaaacaatctcctgtgtaaaaaacagggtaaggctgcgtacaatacacc-aaaatggtgggaccccttcttggaccctacggatgcgg 44742545  T
Q  236 gagcttcagtgcaccaggttgccc 259  Q
    |||| | |||||||| || |||||    
T  44742544 gagcattagtgcaccggggtgccc 44742521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 142 - 262
Target Start/End: Original strand, 10857845 - 10857964
Alignment:
Q  142 gtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagct 240  Q
    |||| |||||| ||||||||||||||| | ||||||||||||||| ||||||||||||   |||||||||| ||||||||||| ||||||||||||||||    
T  10857845 gtccaggaaaccgcctcttgtgtaaaaaaacagggtaaggctgcgcacaatacaccaat--tggtgggaccacttcctggaccttgcgtatgcgggagct 10857942  T
Q  241 tcagtgcaccaggttgcccttt 262  Q
    | |||||||| |||||||||||    
T  10857943 ttagtgcaccgggttgcccttt 10857964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 35105929 - 35106022
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccct 225  Q
    ||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||||||    
T  35105929 cacgggttcaagtcctggaaacaacctcttgtgtaaaagagagtgtaaggctgcgtacaatacacc-agaatggtgggacctcttcctggaccct 35106022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 20869625 - 20869523
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||    |||| |||||||||| ||||||||| ||    
T  20869625 cacgggttcaagtcctggaaacagcctcttgtgtaaa--acagggtaaggctgtgtacaatacaccaa----ggtgagaccccttcccggaccctgcata 20869532  T
Q  231 tgcgggagc 239  Q
    |||||||||    
T  20869531 tgcgggagc 20869523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 5689640 - 5689754
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||| || ||| ||||||||||||||||  ||||||||||||||||||||||||||  ||||||||| ||||||||| | ||| ||||||||     
T  5689640 gggttcaagtcttgtaaatagcctcttgtgtaaaaagcagggtaaggctgcgtacaatacacc--aaatggtggaaccccttcccgaaccatgcgtatgt 5689737  T
Q  234 gggagcttcagtgcacc 250  Q
    |||||||| ||||||||    
T  5689738 gggagctttagtgcacc 5689754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 389649 - 389768
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgt--aaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcg 228  Q
    ||||||||||||||||||||||| ||||||||||  |||| ||||||||||| |||||||||||||||  ||||| ||||| ||||| |  |||||||||    
T  389649 cacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggtaaggttgcgtacaatacacc--aaatgatgggatccctttcctgaccctgcg 389746  T
Q  229 tatgcgggagcttcagtgcacc 250  Q
    |||||| |||||| ||||||||    
T  389747 tatgcgagagctttagtgcacc 389768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 253
Target Start/End: Original strand, 22598163 - 22598282
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||| ||||||||||| |||||||||||||| |||||||||||||  ||||||||||||  || ||||| ||||| |||| ||||| ||||||    
T  22598163 cacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaatacacc--aattggtgagaccctttcccggaccttgcgta 22598260  T
Q  231 tgcgggagcttcagtgcaccagg 253  Q
    ||||||| ||| |||||||||||    
T  22598261 tgcggga-ctttagtgcaccagg 22598282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 248
Target Start/End: Complemental strand, 42083828 - 42083712
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||| |||||||||| |  ||| ||||||||||||| || ||| |||||||||||||||||||| | |||||| |||    
T  42083828 cacgggttcaagtcctggaaacagccttttgtgtaaaaaatggggcaaggctgcgtacagtatacc-aaaatggtgggaccccttcccgaaccctgtgta 42083730  T
Q  231 tgcgggagcttcagtgca 248  Q
     | |||||||| ||||||    
T  42083729 cgtgggagctttagtgca 42083712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 31457179 - 31457307
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||| ||||| |||||||||||||| | |||  |||||||||||||||||| ||||  |||| |||||||||||   ||||||||||    
T  31457179 cacgggttcaagtcctgtaaacaacctcttgtgtaaaa-ataggaaaaggctgcgtacaatacatcaaa--tggtaggaccccttcccaaaccctgcgta 31457275  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| | |||||||||    
T  31457276 tgcgggagctctagtgcaccggattgcccttt 31457307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 43942348 - 43942416
Alignment:
Q  149 aaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcc 217  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43942348 aaacagcctcttatgtcaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcc 43942416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 134 - 241
Target Start/End: Complemental strand, 14018095 - 14017989
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||| || |||||||||||||| | ||| |||||||||| |||||||||||||||  ||||    
T  14018095 gggttcaagtcttggaaacagtctcttgtgtaaaaaacagggtgagactgcgtacaataca-ctaaattggtgggaccacttcctggaccctgcagatgc 14017997  T
Q  234 gggagctt 241  Q
    || |||||    
T  14017996 ggtagctt 14017989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 24245457 - 24245563
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacacc-aaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||||||||||||||||||||| | ||||| ||||    |||||||||| || |||||||| |||| |||||| ||||||||||||||||||||||||||    
T  24245457 cacgggttcaagtcctggaaac-gtctcttatgta----acagggtaagactacgtacaatgcaccaaaaaattgtgggaccccttcctggaccctgcgt 24245551  T
Q  230 atgcgggagctt 241  Q
    ||||||||||||    
T  24245552 atgcgggagctt 24245563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 28407422 - 28407538
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||            ||||||  |||||||||||||||| ||||||| ||||    
T  28407422 cacgggttcaagtcctggaaacagcctcttgtgtaaaa-acagggtaaggc------------accaaa--tggtgggaccccttcccggaccctacgta 28407506  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| | |||||| |||||||||||    
T  28407507 tgcgggagctttactgcaccgggttgcccttt 28407538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 11748305 - 11748391
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcc 217  Q
    |||||||||||||| ||||||||||||||| |||||||  ||||||||| | |||||||||| || ||||||||| |||||||||||    
T  11748305 cacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggtaagacagcgtacaatatacaaaaaatggtaggaccccttcc 11748391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 19729363 - 19729475
Alignment:
Q  146 tggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagt 245  Q
    ||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||| ||||||||  |||    
T  19729363 tggaaacagtctcttatgtaaaa--cagggtaaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatacgggagctctagt 19729458  T
Q  246 gcaccaggttgcccttt 262  Q
    ||||  | |||||||||    
T  19729459 gcactggattgcccttt 19729475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 16013511 - 16013591
Alignment:
Q  182 tgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||| |||||||||| ||||||||||  |||||||| ||||||||||||| |||||||| ||||| |||||    
T  16013511 tgcgtacaatacactaaaaatggtgcgaccccttcccagaccctgcctatgcgggagctttagtgcaccgggttgtccttt 16013591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 23000338 - 23000225
Alignment:
Q  140 aagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagc 239  Q
    ||||||||||||||||||||||||||||| ||| ||||||| | | |||||||||||  |||||||||||||||||||         || ||||||||||    
T  23000338 aagtcctggaaacagcctcttgtgtaaaa-acacggtaaggttccatacaatacacc--aaatggtgggaccccttcc---------cggatgcgggagc 23000251  T
Q  240 ttcagtgcaccaggttgccctttact 265  Q
    || |||||||| ||||||||||||||    
T  23000250 tttagtgcaccgggttgccctttact 23000225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 26102578 - 26102652
Alignment:
Q  186 tacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||||  |||||||||||||||| ||||||||| ||||||||||||  |||||||| |||||||||||    
T  26102578 tacaatacaccaaa--tggtgggaccccttcccggaccctgcttatgcgggagctctagtgcaccgggttgcccttt 26102652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 263
Target Start/End: Original strand, 33866957 - 33867088
Alignment:
Q  133 cgggttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtat 231  Q
    ||||||||||||||  ||||| | | |||||||||| | ||||||||| |||| |||||||||  ||||||||||  ||  ||||| | |||||||||||    
T  33866957 cgggttcaagtcctaaaaacaactttttgtgtaaaaaagcagggtaagactgcatacaatacataaaaaatggtgacacttcttcccgaaccctgcgtat 33867056  T
Q  232 gcgggagcttcagtgcaccaggttgcccttta 263  Q
    || | ||||| |||||||| ||||||||||||    
T  33867057 gcagaagctttagtgcaccgggttgcccttta 33867088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 27507985 - 27508044
Alignment:
Q  202 tggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccctt 261  Q
    |||||||||||||||| | ||||||||||||||||||||| |||||||| ||||| ||||    
T  27507985 tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcaccgggttgtcctt 27508044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 35107374 - 35107311
Alignment:
Q  199 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||||||||| |||| ||| |||||||| ||||| |||||||| |||||||||||    
T  35107374 aaatggtgggaccccttcccggacgctgtgtatgcggaagctttagtgcaccgggttgcccttt 35107311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 27468141 - 27468092
Alignment:
Q  213 cttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  27468141 cttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 27468092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 30962896 - 30962847
Alignment:
Q  137 ttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgt 186  Q
    |||||||||||||||||||||||||||||||| | ||||| |||||||||    
T  30962896 ttcaagtcctggaaacagcctcttgtgtaaaaaatagggttaggctgcgt 30962847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 255
Target Start/End: Original strand, 26457776 - 26457855
Alignment:
Q  172 agggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggtt 255  Q
    |||||||||||||||||||||||||  || |||||||||||| |||| |||| |||||||| |||||||| |||||||| ||||    
T  26457776 agggtaaggctgcgtacaatacacc--aattggtgggacccc-tcct-gaccttgcgtatgagggagctttagtgcaccgggtt 26457855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 23286432 - 23286375
Alignment:
Q  151 acagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccc 212  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||  ||||||||||||||    
T  23286432 acagcctcttgtgtaaaa--cagggtaaagctgcgtacaatacacc--aaatggtgggaccc 23286375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 36918135 - 36918198
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    |||||||| |||||||||   |||| ||||||| |||||||||||||| |||||||||||||||    
T  36918135 gttcaagttctggaaacaatttcttatgtaaaaaacagggtaaggctgtgtacaatacaccaaa 36918198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 36486627 - 36486567
Alignment:
Q  201 atggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccctt 261  Q
    ||||||||||| ||||| ||||| ||||||||| ||||||| ||||| || ||||||||||    
T  36486627 atggtgggacctcttcccggaccttgcgtatgcaggagctttagtgccccgggttgccctt 36486567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 18595906 - 18595969
Alignment:
Q  195 ccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcc 258  Q
    ||||||||| | ||||||||||| |||||||| ||||||||||| || |||||| | |||||||    
T  18595906 ccaaaaatgataggaccccttcccggaccctgtgtatgcgggagttttagtgcatcgggttgcc 18595969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 30962814 - 30962770
Alignment:
Q  219 ggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    |||||||||||||||||||| || |||| ||| ||||||||||||    
T  30962814 ggaccctgcgtatgcgggagatttagtgaaccgggttgcccttta 30962770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 5e-50; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 47716465 - 47716597
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||    
T  47716465 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcata 47716564  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttta 263  Q
    |||||||||||  ||||||| ||||||||||||    
T  47716565 tgcgggagctttggtgcaccgggttgcccttta 47716597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 42805530 - 42805661
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||| |||||| || ||    
T  42805530 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggaccccgcata 42805629  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  42805630 tgcgggagctttagtgcaccgggttgcccttt 42805661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 7879644 - 7879773
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||  ||||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  7879644 cacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgta 7879741  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||||||| |||||||||||    
T  7879742 tgcgggagcttcagtgcaccgggttgcccttt 7879773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 131 - 263
Target Start/End: Complemental strand, 2541148 - 2541018
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||  ||||||||||||||||||| || |||||||||    
T  2541148 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtactatacacc--aaatggtgggaccccttcccggtccctgcgta 2541051  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||||| |||||||| |||| |||||||    
T  2541050 tgcgggagctttagtgcaccgggtttcccttta 2541018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 21172136 - 21172009
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||    
T  21172136 cacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcata 21172041  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| |||||||||||    
T  21172040 tgcgggagctctagtgcaccgggttgcccttt 21172009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 134 - 262
Target Start/End: Original strand, 43557481 - 43557610
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| ||| |||| ||||||||||    
T  43557481 gggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgggaccccctcccggactctgcgtatgc 43557580  T
Q  234 gggagc-ttcagtgcaccaggttgcccttt 262  Q
    |||||| || |||||||| |||||||||||    
T  43557581 gggagcttttagtgcaccgggttgcccttt 43557610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 27629640 - 27629769
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||  ||||||||||||||||||| || |||||| ||    
T  27629640 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtaaaatacacc--aaatggtgggaccccttcccgggccctgcata 27629737  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||| |||||||||||||| |||||||||||    
T  27629738 tgcggtagcttcagtgcaccgggttgcccttt 27629769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 135 - 261
Target Start/End: Complemental strand, 11617713 - 11617589
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||     
T  11617713 ggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacacc--aaatggtgggaccccttcctggaccctgcgtatgca 11617616  T
Q  235 ggagcttcagtgcaccaggttgccctt 261  Q
    ||| ||| |||||||| ||||||||||    
T  11617615 ggacctttagtgcaccgggttgccctt 11617589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 131 - 263
Target Start/End: Complemental strand, 10693200 - 10693072
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||    
T  10693200 cacgggttcaagtcctggaaacagcctcttgtgtaaaaga--gggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcata 10693105  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||||  |||||||  ||||||||||||    
T  10693104 tgcgggagctctagtgcactgggttgcccttta 10693072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 42391227 - 42391100
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||    
T  42391227 cacgggttcaagtcctggaaacagcttcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcata 42391132  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| |||||||||||    
T  42391131 tgcgggagctctagtgcaccgggttgcccttt 42391100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 32758271 - 32758394
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||||    
T  32758271 ggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcg 32758366  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||  |||||||| |||||||||||    
T  32758367 ggagctctagtgcaccgggttgcccttt 32758394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 19427018 - 19426890
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||  ||||||||||| ||||||  ||||||||| ||    
T  19427018 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaagactgcgtacaatacacc--aaatggtggga-cccttctcggaccctgcata 19426922  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||| ||||||||||||||| |||||||||||    
T  19426921 tgcgagagcttcagtgcaccgggttgcccttt 19426890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 133 - 263
Target Start/End: Complemental strand, 33872036 - 33871909
Alignment:
Q  133 cgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatg 232  Q
    ||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||||||  ||||||| |||||    
T  33872036 cgggttcaagtcctggaaacaacctcttgtgtaaaa-acaggataaggctgcgtacaatacaccaaa--tggtgggaccccttcccagaccctgtgtatg 33871940  T
Q  233 cgggagcttcagtgcaccaggttgcccttta 263  Q
    || |||||| |||||||||||||||| ||||    
T  33871939 cgagagctttagtgcaccaggttgcctttta 33871909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 134 - 263
Target Start/End: Complemental strand, 22699096 - 22698966
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccc-cttcctggaccctgcgtatg 232  Q
    |||||||||||||||||| || ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||  |||| |||||||| |||||    
T  22699096 gggttcaagtcctggaaatagtctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaaaatggtgggacccttttcccggaccctgtgtatg 22698997  T
Q  233 cgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||  |||||||| |||| |||||||    
T  22698996 cgggagctatagtgcaccgggttacccttta 22698966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 46354200 - 46354302
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||    
T  46354200 cacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcata 46354299  T
Q  231 tgc 233  Q
    |||    
T  46354300 tgc 46354302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 40463883 - 40464011
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||| | ||||||| ||||||||||||| || ||||||||||||||| |||||||||||  |||||||||||||||  ||||||||||||    
T  40463883 cacgggttcaagtcatagaaacagtctcttgtgtaaaa-actgggtaaggctgcgtataatacaccaaa--tggtgggaccccttctcggaccctgcgta 40463979  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||||||||||  ||||||||||    
T  40463980 tgcgggagcttcagtgcaccgagttgcccttt 40464011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 42798675 - 42798804
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||| ||||||||| ||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||| |||| ||||||||| ||    
T  42798675 cacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgcgtacaatacacc--aaatggtgggaccctttcccggaccctgcata 42798772  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||| | |||||||||||    
T  42798773 tgcgggagctatagtgcatcgggttgcccttt 42798804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 135 - 265
Target Start/End: Complemental strand, 23419799 - 23419671
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||  |||||||||||||||||||| |||| ||||| ||||    
T  23419799 ggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacc--aaatggtgggaccccttcctagaccttgcgtgtgcg 23419702  T
Q  235 ggagcttcagtgcaccaggttgccctttact 265  Q
    || |||| |||||| | || |||||||||||    
T  23419701 ggggctttagtgcatcgggctgccctttact 23419671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 29907425 - 29907552
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||| ||||||||||||||||||||| | || |||||||||||| ||||||||| |||||||||||||||| ||| |||||||  |||    
T  29907425 cacgggttcaagtcctagaaacagcctcttgtgtaaaaaatagtgtaaggctgcgttcaatacacc-aaaatggtgggaccccatcccggaccct--gta 29907521  T
Q  231 tgcgggagcttcagtgcaccaggttgccctt 261  Q
    ||||||||||| |||||||| ||||||||||    
T  29907522 tgcgggagctttagtgcaccgggttgccctt 29907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 131 - 263
Target Start/End: Complemental strand, 48735250 - 48735121
Alignment:
Q  131 cacgggttcaagtcct-ggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||||||||||||||| ||||||| |||||||||||||| ||  ||||||||||||||||||||||||||  |||||||||||||||| ||||||||| |    
T  48735250 cacgggttcaagtccttggaaacaacctcttgtgtaaaacac--ggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcat 48735155  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttta 263  Q
    |||||||||||  |||||||| ||||||||||||    
T  48735154 atgcgggagctctagtgcaccgggttgcccttta 48735121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 131 - 260
Target Start/End: Complemental strand, 18512581 - 18512455
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||| | |||||||||||| | ||||||||||||||||||||||||| ||  |||||||||||||||| ||||||||||||    
T  18512581 cacgggttcaagtcctggaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacaccgaa--tggtgggaccccttcccggaccctgcgta 18512485  T
Q  231 tgcgggagcttcagtgcaccaggttgccct 260  Q
    |||||||||||  ||||||  |||||||||    
T  18512484 tgcgggagctttggtgcactgggttgccct 18512455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 34626330 - 34626208
Alignment:
Q  137 ttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcggg 236  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||  |||||||| ||||||| ||||||||||||||||||    
T  34626330 ttcaagtcctggaaacagcctcctgtgtaaaa-acagggtaaggctgcgttcaatacaccaaa--tggtgggatcccttcccggaccctgcgtatgcggg 34626234  T
Q  237 agcttcagtgcaccaggttgcccttt 262  Q
    ||||| ||| || | |||||||||||    
T  34626233 agctttagttcatcgggttgcccttt 34626208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 18747492 - 18747621
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||||| ||||||| |||||||||||| |||||||||| | ||||||||||||||||| ||||||||||   |||||||||||||||||| |||||||||    
T  18747492 cacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggtaaggctgcgtataatacaccaat--tggtgggaccccttcctgaaccctgcgt 18747589  T
Q  230 atgcgggagcttcagtgcaccaggttgccctt 261  Q
    |||||||||||| |||||||| || |||||||    
T  18747590 atgcgggagctttagtgcaccgggctgccctt 18747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 7644962 - 7645066
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||   |||||||||||||| ||||| ||||||||||||||| |||||||||||    
T  7644962 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagatagcgtacaatacacc-aaaattgtgggaccccttcct-gaccctgcgta 7645059  T
Q  231 tgcggga 237  Q
    |||||||    
T  7645060 tgcggga 7645066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 35203445 - 35203555
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||  ||||||||||||| ||||| |||| |||||||||||| |||||||||||||||| ||||||||| || || ||||    
T  35203445 cacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggataagactgcgtacaatataccaaaaatggtgggatcccttcctgaactctacgta 35203544  T
Q  231 tgcgggagctt 241  Q
    |||||||||||    
T  35203545 tgcgggagctt 35203555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 39123896 - 39124030
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggta----aggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctg 226  Q
    |||||||||||||||| ||||| | ||||||||||||| ||||||||    |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  39123896 cacgggttcaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 39123994  T
Q  227 cgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||| ||||||||  |||||||| | ||||||||    
T  39123995 cgtatgagggagctttggtgcaccaagctgcccttt 39124030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 31591236 - 31591109
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||| |||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||||  | ||||||||||||||||||| ||||| ||| ||    
T  31591236 cacgagttcaagtcctggaaacaacctcttgtgtaaaa--cagagtaaggctgcgtacaataca--ataaatggtgggaccccttcccggaccttgcata 31591141  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| |||||||||||    
T  31591140 tgcgggagctctagtgcaccgggttgcccttt 31591109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 42476879 - 42477005
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||| ||||||| |||||||||| |||||||||||||  || ||||||||||||||||||||||||||  ||||||||||||||||| | | |||| ||    
T  42476879 cacggattcaagttctggaaacagtctcttgtgtaaaa--caaggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcctaggctctgcata 42476974  T
Q  231 tgcgggagcttcagtgcaccaggttgccctt 261  Q
    ||||||||||  |||||||||||||||||||    
T  42476975 tgcgggagctctagtgcaccaggttgccctt 42477005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 13805109 - 13805215
Alignment:
Q  132 acgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtat 231  Q
    |||||||||||||||||||| ||||||| |||||||| |  ||||||||||| |||||||||||||||  |||||||||| |||||||||||||||||||    
T  13805109 acgggttcaagtcctggaaatagcctctggtgtaaaacag-gggtaaggctgtgtacaatacaccaaa--tggtgggaccacttcctggaccctgcgtat 13805205  T
Q  232 gcgggagctt 241  Q
    ||||||||||    
T  13805206 gcgggagctt 13805215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 38604546 - 38604640
Alignment:
Q  144 cctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagctt 241  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| |||||||| | |||||||||||||||||||||||    
T  38604546 cctggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaa--tggtgagacccctttccggaccctgcgtatgcgggagctt 38604640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 150 - 262
Target Start/End: Complemental strand, 35787378 - 35787269
Alignment:
Q  150 aacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcac 249  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||||||||||  ||| |||||||||||| ||||| ||||||||||||||||||| |||||    
T  35787378 aacagcctcttgtgtaaaa-acatggtaaggttgcgtacaatacaccaaa--tggcgggaccccttcccggaccttgcgtatgcgggagcttcaatgcac 35787282  T
Q  250 caggttgcccttt 262  Q
    | |||||||||||    
T  35787281 cgggttgcccttt 35787269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 134 - 241
Target Start/End: Original strand, 19266459 - 19266564
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    |||||||||||||| ||| |||| |||| |||||| |||||||||||||||||||||||||||  |||| |||||| ||||||| |||||||||||||||    
T  19266459 gggttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaaggctgcgtacaatacacc--aaattgtgggatcccttcccggaccctgcgtatgc 19266556  T
Q  234 gggagctt 241  Q
    ||||||||    
T  19266557 gggagctt 19266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 38262325 - 38262196
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||| ||||||||||||| | | ||||| | ||| |||||||||||  ||||| ||||||||||||| | || |||||||    
T  38262325 cacgggttcaagtcctggaaacagtctcttgtgtaaaaaatatggtaatgttgcatacaatacacc--aaatgatgggaccccttcccgaacactgcgta 38262228  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| | |||||||||    
T  38262227 tgcgggagctttagtgcaccggattgcccttt 38262196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 21566445 - 21566559
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||| ||||||| ||||||||||||||| |||| | ||| |||||||||||||||| |||||||| ||||||||||| | ||||||| ||||||    
T  21566445 ggttcaagtcttggaaaccgcctcttgtgtaaaaaacagaggaagactgcgtacaatacacc-aaaatggtaggaccccttcccgaaccctgcatatgcg 21566543  T
Q  235 ggagcttcagtgcacc 250  Q
    ||||||| ||||||||    
T  21566544 ggagctttagtgcacc 21566559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 131 - 260
Target Start/End: Complemental strand, 35334943 - 35334818
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||| ||||||||||||||||||| |||  |||||||| |||||||||| ||| |||||||||||| ||  |||||||||||||||| ||||||||||||    
T  35334943 cacgagttcaagtcctggaaacagtctc--gtgtaaaaaacagggtaagactgtgtacaatacaccgaa--tggtgggaccccttcccggaccctgcgta 35334848  T
Q  231 tgcgggagcttcagtgcaccaggttgccct 260  Q
    ||| ||||||| |||||||| |||| ||||    
T  35334847 tgcaggagctttagtgcaccgggtttccct 35334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 261
Target Start/End: Complemental strand, 3469301 - 3469176
Alignment:
Q  138 tcaagtcctggaaacagcctcttgtgtaaaaga--cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    ||||||||| ||||||  ||||||||||||| |  ||||||| || ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  3469301 tcaagtcctagaaacattctcttgtgtaaaaaaaacagggtacggttgcgtacaatacaccaaaaatggcgggaccccttcctagaccctgtgtatgcgg 3469202  T
Q  236 gagcttcagtgcaccaggttgccctt 261  Q
    |||||| ||||| |  ||||||||||    
T  3469201 gagctttagtgcgctgggttgccctt 3469176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 16341284 - 16341413
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||| || ||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||| || ||||| |||||   | ||    
T  16341284 cacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggtaaggctacgtacaatacacc-aaaatggtgggccctcttcccggacctatcata 16341382  T
Q  231 tgcgggagcttcagtgcaccaggttgccctt 261  Q
    |||||||||||  ||||||| || |||||||    
T  16341383 tgcgggagctttggtgcaccgggctgccctt 16341413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 137 - 233
Target Start/End: Original strand, 1408469 - 1408563
Alignment:
Q  137 ttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||| |  ||||||||||||||||||| |||||||||||||||    
T  1408469 ttcaagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggctgtgtacaatacagc--aaatggtgggaccccttcccggaccctgcgtatgc 1408563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 48123610 - 48123508
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||||||||||||||||||||||||||  |||||||||  |||| |||||||||||  ||||||||||||||||| ||||||| ||| |||||    
T  48123610 gggttcaagtcctggaaacagcctcttgtgtaaataacagggtaaaactgcatacaatacacc--aaatggtgggacccctttctggaccatgcatatgc 48123513  T
Q  234 gggag 238  Q
    |||||    
T  48123512 gggag 48123508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 14732948 - 14732833
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    |||||||||||||||||||||||||   ||||||| ||||||||||||||||| |||||||||||||||||||  || |||||| | ||||||  |||||    
T  14732948 gggttcaagtcctggaaacagcctcccatgtaaaaaacagggtaaggctgcgt-caatacaccaaaaatggtgaaactccttcccgaaccctgtttatgc 14732850  T
Q  234 gggagcttcagtgcacc 250  Q
    |||||||| ||||||||    
T  14732849 gggagctttagtgcacc 14732833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 19265821 - 19265948
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||| |||| |||||| ||||||||||| | |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||| | ||    
T  19265821 cacgggttcaagtcttggatacagccgcttgtgtaaaa-agagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccgga-cctacata 19265916  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    || |||||||| |||||||| || ||||||||    
T  19265917 tgtgggagctttagtgcaccgggctgcccttt 19265948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 45019010 - 45018923
Alignment:
Q  177 aaggctgcgtacaatacaccaaaaa--tggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||| ||||||||  |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  45019010 aaggctgcgtacaatataccaaaaaactggtggaaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggttgcccttt 45018923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 262
Target Start/End: Complemental strand, 32233260 - 32233135
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| ||||| | ||||||  |||||||||||  ||||||   ||||||| ||||     
T  32233260 gggttcaagtcctggaaacaacctcttgtgtaaaa-acagggtaaggcagcgtatattacacc--aaatggtgggattccttcccaaaccctgcatatga 32233164  T
Q  234 gggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||||||| || ||||||||    
T  32233163 gggagcttcagtgcaccgggctgcccttt 32233135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 33500558 - 33500635
Alignment:
Q  170 acagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgc 247  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  33500558 acagggtaagactgcgtactatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcgggatcttcagtgc 33500635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 141 - 264
Target Start/End: Original strand, 23231573 - 23231694
Alignment:
Q  141 agtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagct 240  Q
    ||||||||||| |||||||||||||||| | | |||||||||||||| ||||||||   |||| ||||||||||||| | ||||||||||||||| ||||    
T  23231573 agtcctggaaagagcctcttgtgtaaaatataaggtaaggctgcgtataatacacc--gaatgatgggaccccttcccgaaccctgcgtatgcggcagct 23231670  T
Q  241 tcagtgcaccaggttgccctttac 264  Q
    | ||||||||  ||| ||||||||    
T  23231671 ttagtgcaccgagtttccctttac 23231694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 135 - 240
Target Start/End: Complemental strand, 2663058 - 2662958
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||  |||||||||||||| || |  |||||||| ||||||    
T  2663058 ggttcaagtcctggaaacagcctcttgtgtaaa--atagggtaaggctgcgtacaatacacc--aaatggtgggacccttttc-agaccctgcatatgcg 2662964  T
Q  235 ggagct 240  Q
    ||||||    
T  2662963 ggagct 2662958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 28362270 - 28362166
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||||| ||||| ||||||||||||||| ||  |||||||||||||||||||||||  |||||||||||||||||||  |||| ||| |||| |    
T  28362270 ggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccagaccttgcatatgtg 28362173  T
Q  235 ggagctt 241  Q
    |||||||    
T  28362172 ggagctt 28362166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 27889399 - 27889316
Alignment:
Q  177 aaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||  || |||| |||||||||||    
T  27889399 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttggtacaccgggttgcccttt 27889316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 134 - 261
Target Start/End: Original strand, 11741804 - 11741927
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    |||||||||||||| ||||||| ||| |||||||| |  ||||||||||||||||||||||||  ||||||||||| ||||||| |||  ||||  ||||    
T  11741804 gggttcaagtcctgaaaacagcttctagtgtaaaata--gggtaaggctgcgtacaatacacc--aaatggtgggatcccttcccggattctgcacatgc 11741899  T
Q  234 gggagcttcagtgcaccaggttgccctt 261  Q
    |||||||  |||||||| ||||||||||    
T  11741900 gggagctctagtgcaccgggttgccctt 11741927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 14099132 - 14099030
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||| |||||||||||| ||||| |||||||||| ||||| |||| ||||||||||||||||  ||||||||||||||||||| | ||||| |||||||    
T  14099132 gggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatacacc--aaatggtgggaccccttcccgaaccctacgtatgc 14099035  T
Q  234 gggag 238  Q
     ||||    
T  14099034 aggag 14099030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 14409149 - 14409047
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||| |||||||||||| ||||| |||||||||| ||||| |||| ||||||||||||||||  ||||||||||||||||||| | ||||| |||||||    
T  14409149 gggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatacacc--aaatggtgggaccccttcccgaaccctacgtatgc 14409052  T
Q  234 gggag 238  Q
     ||||    
T  14409051 aggag 14409047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 250
Target Start/End: Complemental strand, 47077982 - 47077867
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||| ||||||||||||  | || |||| | ||||||||||||||  ||||||||||||||||||||   ||||| | ||    
T  47077982 cacgggttcaagtcctggaaacagtctcttgtgtaaa--atagagtaaagttgcgtacaatacac--aaaatggtgggaccccttcccaaaccctacata 47077887  T
Q  231 tgcgggagcttcagtgcacc 250  Q
    ||||||||||  ||||||||    
T  47077886 tgcgggagctctagtgcacc 47077867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 12473313 - 12473380
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaa 201  Q
    |||||||||||||| ||||| |||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  12473313 gggttcaagtcctgcaaacaacctcttgtgtcaaaaacagggtaaggatgcgtacaatacaccaaaaa 12473380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 247
Target Start/End: Complemental strand, 42102009 - 42101899
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    |||||||||||||||||||||||||  |||||| |||||||||  ||||||||| |||  | ||| ||||||||||| |||| ||||||||||||| |||    
T  42102009 gttcaagtcctggaaacagcctcttccgtaaaaaacagggtaacactgcgtacagtac-tctaaagtggtgggaccctttcccggaccctgcgtatccgg 42101911  T
Q  236 gagcttcagtgc 247  Q
     ||||| |||||    
T  42101910 cagctttagtgc 42101899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 5180283 - 5180202
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggacccctt 215  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||| ||| |||||| |||||||||||| | |||||||||    
T  5180283 gggttcaacttctggaaacagcctcttgtgtcaaaaacagggtaagactgtgtacaacacaccaaaaatgattggacccctt 5180202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 263
Target Start/End: Complemental strand, 8149075 - 8148945
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgt-aaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||| |||||||||||| ||||  |||||||||| |||| | ||||||||| |||||||||||||||  |||||||||||||||||||  || | |||||    
T  8149075 cacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaaggttgcgtacaatacacc--aaatggtgggaccccttcccaga-cttgcgt 8148979  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||| ||| || |||||| ||| || |||||||    
T  8148978 atgcgagagttttagtgcatcagattacccttta 8148945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 18327040 - 18327091
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctg 183  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  18327040 cacgggttcaagtcccggaaacagcctcttgtgtaaaa-acagggtaaggctg 18327091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 11888414 - 11888473
Alignment:
Q  204 gtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||  ||||||||||||    
T  11888414 gtgggacccctttctggaccctgtgtatgcaggagcttcagtgcactgggttgcccttta 11888473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 28078260 - 28078153
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||| ||||||| ||| |||  |||| ||||||||||| ||| | ||||||||||||  |||||||||||||||| | | ||||| ||    
T  28078260 cacgggttcaagtcctagaaacagtctcgtgtaaaaaa-acagggtaaggttgcatgcaatacaccaaa--tggtgggaccccttcccgaatcctgcata 28078164  T
Q  231 tgcgggagctt 241  Q
    |||| ||||||    
T  28078163 tgcgagagctt 28078153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 27697452 - 27697572
Alignment:
Q  140 aagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtggg--accccttcctg-gaccctgcgtatgcggg 236  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||| |||  ||||||||||| |||||||  |||| ||||   |||||||||||||||||    
T  27697452 aagtcctggaaacaacctcttgtgtaaaaatcagggcaaggctgtgta--atacaccaaaa-tggtgggggaccctttccccagaccctgcgtatgcggg 27697548  T
Q  237 agcttcagtgcaccaggttgccct 260  Q
    ||||| | |||||| || ||||||    
T  27697549 agcttaaatgcaccgggatgccct 27697572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 42495964 - 42495916
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaagg 180  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  42495964 cacgggttcaagtcctggaaacagcctcttgtataaaa-acagggtaagg 42495916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 1424039 - 1423967
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatg 203  Q
    ||||| ||||| |||||||||||| || |||||||||| ||||||||| ||||| |||| |||||||| ||||    
T  1424039 cacggattcaaatcctggaaacagtctgttgtgtaaaaaacagggtaatgctgcatacactacaccaataatg 1423967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 15108525 - 15108458
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    |||| |||||||||||||||||||  |||||||||||| ||| |||||||||| |||||||||| ||||    
T  15108525 cacgagttcaagtcctggaaacagtttcttgtgtaaaa-acaaggtaaggctgtgtacaatacatcaaa 15108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 7794635 - 7794582
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgt--aaaagacagggtaaggct 182  Q
    |||||||||||||||||||||||||||||| |||  |||| |||||||||||||    
T  7794635 cacgggttcaagtcctggaaacagcctcttatgtaaaaaaaacagggtaaggct 7794582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 25434050 - 25434143
Alignment:
Q  156 ctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcacc 250  Q
    |||||||| |||| ||| ||||||  ||| ||||| ||||||||| ||||  |||  |||| |||||||||||||||||||||||| ||||||||    
T  25434050 ctcttgtgcaaaaaacatggtaagagtgcatacaacacaccaaaa-tggtatgacttcttcttggaccctgcgtatgcgggagctttagtgcacc 25434143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 36602540 - 36602582
Alignment:
Q  220 gaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  36602540 gaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 36602582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 44123749 - 44123643
Alignment:
Q  132 acgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtat 231  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||||||| ||| |  ||||||||  | ||  |||||||| |||  |||| ||||||||    
T  44123749 acgggttcaagtactggaaacagcctcttgtgtaaaa-acaaggtaaggttgcatgaaatacacc--atataatgggacccgttctcggacactgcgtat 44123653  T
Q  232 gcgggagctt 241  Q
    || |||||||    
T  44123652 gcaggagctt 44123643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 251
Target Start/End: Complemental strand, 17048914 - 17048826
Alignment:
Q  162 tgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcacca 251  Q
    ||||||| ||||||||||| | ||||||||||||| |||||||||| ||||||||| ||| | ||| ||||  ||||||| |||| ||||    
T  17048914 tgtaaaaaacagggtaaggttacgtacaatacacc-aaaatggtggaaccccttcccggaacttgcttatgtaggagctttagtgaacca 17048826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 6736896 - 6736963
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    ||||||||||||||||  ||||| |||||||| ||||| ||| |||||| |||| ||||||||||||||    
T  6736896 cacgggttcaagtcctcaaaacaacctcttgtataaaa-acaaggtaagactgcatacaatacaccaaa 6736963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 42495913 - 42495865
Alignment:
Q  211 cccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccc 259  Q
    ||||||| ||||||||||||||||||||||| ||||||||  |||||||    
T  42495913 cccttcccggaccctgcgtatgcgggagctttagtgcaccccgttgccc 42495865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 43852049 - 43852111
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaataca 194  Q
    ||||||||||||||||| ||| | |||||| ||||||| |||||||||||||  ||||||||||    
T  43852049 cacgggttcaagtcctgaaaaaa-cctcttctgtaaaaaacagggtaaggctatgtacaataca 43852111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 21139851 - 21139761
Alignment:
Q  156 ctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcac 249  Q
    ||||||||||||| |||| |||||| ||  |||| |||||||||  |||||||||||||||| | || ||| |||||||| ||||| |||||||    
T  21139851 ctcttgtgtaaaa-acagagtaaggttggatacagtacaccaaa--tggtgggaccccttcccgaactctgtgtatgcggaagctttagtgcac 21139761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 36267900 - 36267829
Alignment:
Q  178 aggctgcgtacaatacaccaaaaatggtgggacccctt-cctggaccctgcgtatgcgggagcttcagtgcacc 250  Q
    ||||||||||||||||||||||  |||| |||||| || || | |||||| |||||||||||||| ||||||||    
T  36267900 aggctgcgtacaatacaccaaa--tggttggacccatttcccgaaccctgtgtatgcgggagctttagtgcacc 36267829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 13792250 - 13792162
Alignment:
Q  161 gtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcacc 250  Q
    |||||||| ||  |||||| |||| ||||||||||| ||| ||| |||||||||||  | ||||||||||||| |||||||  |||||||    
T  13792250 gtgtaaaaaacttggtaagactgcatacaatacacccaaa-tggcgggaccccttctcgaaccctgcgtatgctggagcttttgtgcacc 13792162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 7193091 - 7193127
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaa 167  Q
    |||||||||||||||| |||||| |||||||||||||    
T  7193091 cacgggttcaagtcctcgaaacaacctcttgtgtaaa 7193127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 262
Target Start/End: Complemental strand, 23987455 - 23987383
Alignment:
Q  190 atacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||| |||||||||    |||||||||||| || ||| || ||||||||| |||| |||||    
T  23987455 atacaccaaaaatggtaggaccccttttcagaccctgcgtatacgagagttttagtgcaccaagttgtccttt 23987383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 39093530 - 39093439
Alignment:
Q  170 acagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||| ||| |||||||||||| | ||| |||||| ||||||| ||| | ||| ||||| | ||||| |||||||| || ||||||||    
T  39093530 acagggtaagactgtgtacaatacacc-ataatagtgggaacccttcccggaacttgcatatgcagaagctttagtgcaccgggctgcccttt 39093439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 5e-50; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 5648265 - 5648393
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  5648265 cacgggttcaagtcctggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgta 5648361  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||||||  |||||||||||    
T  5648362 tgcgggagcttcagtgcactgggttgcccttt 5648393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 142 - 262
Target Start/End: Complemental strand, 20639777 - 20639658
Alignment:
Q  142 gtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagctt 241  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc-aaaatggtgggaccccttcccggaccctgcgtatgcgggagctt 20639679  T
Q  242 cagtgcaccaggttgcccttt 262  Q
     |||||||| |||||||||||    
T  20639678 tagtgcaccgggttgcccttt 20639658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 16408732 - 16408601
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||| ||||||||| |||||| || ||    
T  16408732 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccccgcata 16408633  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  16408632 tgcgggagctttagtgcaccgggttgcccttt 16408601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 131 - 263
Target Start/End: Complemental strand, 44363261 - 44363129
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||| |||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||  ||||||||||||||||||||||||| ||||||||||||    
T  44363261 cacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgtacaacgcaccaaaaatggtgggaccccttcccggaccctgcgta 44363162  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||||| |||||||| ||||||||||||    
T  44363161 tgcgggagctttagtgcaccgggttgcccttta 44363129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 47443963 - 47444092
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||| ||    
T  47443963 cacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccggaccctgcata 47444060  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||| |||||||||||||||  |||||||||||    
T  47444061 tgcaggagcttcagtgcactgggttgcccttt 47444092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 40915835 - 40915962
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||  |||||||| ||||||| ||||||||||||    
T  40915835 cacgggttcaagtcctggaaacagcctcttgtgtaaaa-acaaggtaaggctgcgtacaatacaccaaa--tggtgggagcccttcccggaccctgcgta 40915931  T
Q  231 tgcgggagcttcagtgcaccaggttgccctt 261  Q
    |||||||||||||||||||| | ||||||||    
T  40915932 tgcgggagcttcagtgcaccggattgccctt 40915962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 6430754 - 6430627
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||| ||||| ||||||||||||    
T  6430754 cacgggttcaagtcatggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaa--tggtgggaccacttcccggaccctgcgta 6430658  T
Q  231 tgcgggagcttcagtgcaccaggttgccctt 261  Q
    ||||||||||| || ||||| ||||||||||    
T  6430657 tgcgggagctttagcgcaccgggttgccctt 6430627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 16911568 - 16911699
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  16911568 cacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgta 16911667  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
     |||||||||| |||  ||| |||||||||||    
T  16911668 cgcgggagctttagtttaccgggttgcccttt 16911699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 135 - 259
Target Start/End: Original strand, 21646974 - 21647098
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||| ||||||||||||||||||  ||||| || ||||||    
T  21646974 ggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggctgcgtacaatataccaataatggtgggaccccttcccagaccccgcatatgcg 21647073  T
Q  235 ggagcttcagtgcaccaggttgccc 259  Q
    ||||||| |||||||| ||||||||    
T  21647074 ggagctttagtgcaccgggttgccc 21647098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 151 - 262
Target Start/End: Original strand, 23501813 - 23501924
Alignment:
Q  151 acagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcacc 250  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||||    
T  23501813 acagcctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcacc 23501912  T
Q  251 aggttgcccttt 262  Q
     |||||||||||    
T  23501913 gggttgcccttt 23501924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 134 - 262
Target Start/End: Original strand, 20224993 - 20225117
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| |||||    
T  20224993 gggttcaagtcctggaaacaacctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgc 20225088  T
Q  234 gggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||  |||||||| |||||||||||    
T  20225089 gggagctctagtgcaccgggttgcccttt 20225117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 48598952 - 48598825
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||| ||||| ||| ||    
T  48598952 cacgggttcaagtcctggaaacagcctcttgtgtaaa--acagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccggaccatgcata 48598857  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||| ||||||  |||||||| |||||||||||    
T  48598856 tgccggagctctagtgcaccgggttgcccttt 48598825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 30639390 - 30639514
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||| ||||||    
T  30639390 ggttcaagtcctggaaacagactcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaa--tggtgagaccccttcccggaccctgcatatgcg 30639486  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||| |||||||  |||||||||||    
T  30639487 ggagctttagtgcactgggttgcccttt 30639514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 131 - 260
Target Start/End: Complemental strand, 29208025 - 29207900
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||    
T  29208025 cacgggttcaagtcctggaaattgcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcata 29207930  T
Q  231 tgcgggagcttcagtgcaccaggttgccct 260  Q
    ||||||||||  |||||||| |||||||||    
T  29207929 tgcgggagctctagtgcaccgggttgccct 29207900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 9832440 - 9832313
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||    
T  9832440 cacgggttcaagtcctgaaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcata 9832345  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||| ||| ||  |||||||| |||||||||||    
T  9832344 tgcaggaactctagtgcaccgggttgcccttt 9832313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 135 - 259
Target Start/End: Complemental strand, 17043519 - 17043398
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||  |||||||| |||||     
T  17043519 ggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccagaccctgcatatgct 17043422  T
Q  235 ggagcttcagtgcaccaggttgccc 259  Q
    ||||||| | ||||||||| |||||    
T  17043421 ggagcttta-tgcaccaggctgccc 17043398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 47528653 - 47528530
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||  |||| |    
T  47528653 ggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgaatatgtg 47528558  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||  |||||||| |||||||||||    
T  47528557 ggagctctagtgcaccgggttgcccttt 47528530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 54175069 - 54175200
Alignment:
Q  131 cacgggttcaagtcctggaaa-cagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggacccctt-cctggaccctgcg 228  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||     
T  54175069 cacggattcaagtcctggaaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacacc-aaaatggtgggaccccttccccggaccctgca 54175166  T
Q  229 tatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||| |||||||| || ||||||||    
T  54175167 tatgcgggagctttagtgcaccgggctgcccttt 54175200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 131 - 265
Target Start/End: Complemental strand, 30690312 - 30690173
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaaga-------cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggacc 223  Q
    ||||||||||||||||||||| |||||||||||||||| |       |||||||||||||| |||||||||||||   |||||||||||||||| |||||    
T  30690312 cacgggttcaagtcctggaaaaagcctcttgtgtaaaaaataaaaaacagggtaaggctgcatacaatacaccaat--tggtgggaccccttcccggacc 30690215  T
Q  224 ctgcgtatgcgggagcttcagtgcaccaggttgccctttact 265  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  30690214 ctgcgtatgcgggagctttagtgcaccaggctgccctttact 30690173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 5306792 - 5306660
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  5306792 cacgggttcaagtcctggaaacagcctcttgtgtaaaa-tcagggtaaggttgcgtacaatacacc--aaatggtgggaccccttcccggaccctgcgta 5306696  T
Q  231 tg----cgggagcttcagtgcaccaggttgcccttt 262  Q
    ||    ||||||||| | |||||| |||||||||||    
T  5306695 tgtggacgggagctttaatgcaccgggttgcccttt 5306660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 134 - 262
Target Start/End: Original strand, 35567179 - 35567305
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||||| |||||  ||||||||||||||||||| | ||||||||| |||    
T  35567179 gggttcaagtcttggaaacagccacttgtgtaaaaaacagggtaaggctgtgtacaacacacc--aaatggtgggaccccttcccgaaccctgcgtctgc 35567276  T
Q  234 gggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||| |||||||| || ||||||||    
T  35567277 gggagctttagtgcaccgggctgcccttt 35567305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 14983840 - 14983969
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||| |||||||| | ||||||||||||||||||||| | ||||||||| ||| |||||||||| |||  |||||||||||||||| ||||||||||||    
T  14983840 cacggattcaagtctttgaaacagcctcttgtgtaaaaaatagggtaaggttgcctacaatacactaaa--tggtgggaccccttcccggaccctgcgta 14983937  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||| |||| ||||||||||    
T  14983938 tgcgggagctttagtgtaccatgttgcccttt 14983969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 54730255 - 54730375
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagac-agggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||||||||||||||| ||||||||||||||||||||| |  ||| |||||||||||| |||||||||| |||| ||| ||||||||| |||||||||||    
T  54730255 cacgggttcaagtcctagaaacagcctcttgtgtaaaaaaataggataaggctgcgtataatacaccaataatgatggaaccccttcccggaccctgcgt 54730354  T
Q  230 atgcgggagcttcagtgcacc 250  Q
    |||||||||||| ||||||||    
T  54730355 atgcgggagctttagtgcacc 54730375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 30352720 - 30352580
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaaga-----cagggtaag----gctgcgtacaatacaccaaaaatggtgggaccccttcctgga 221  Q
    ||||||||  |||||||||||||||||||||||||||| |     |||||||||    |||||||||||||||||||||||||||||||||||||  |||    
T  30352720 cacgggttagagtcctggaaacagcctcttgtgtaaaaaaaaaaacagggtaagtaaagctgcgtacaatacaccaaaaatggtgggaccccttctcgga 30352621  T
Q  222 ccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||||||| ||||||||  ||||||||||    
T  30352620 ccctgcgtatgcgggagctttagtgcaccgtgttgcccttt 30352580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 13256522 - 13256399
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||| | |||| || | ||||    
T  13256522 ggttcaagtcctgga----gcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatagtgggaccccttcccgaaccccgcatctgcg 13256427  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||| |||||||| |||||||||||    
T  13256426 ggagctttagtgcaccgggttgcccttt 13256399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 20225118 - 20225212
Alignment:
Q  169 gacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||||||||||||| |||||||| ||||||||||||    
T  20225118 gacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttta 20225212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 145 - 262
Target Start/End: Original strand, 25629069 - 25629184
Alignment:
Q  145 ctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcag 244  Q
    |||||||||| ||||||||||||| | |||||||||||| |||||||||||||||  |||||||||||||||| ||||||| | ||||||||||||| ||    
T  25629069 ctggaaacagtctcttgtgtaaaaaatagggtaaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctacatatgcgggagctttag 25629166  T
Q  245 tgcaccaggttgcccttt 262  Q
    |||||| |||||||||||    
T  25629167 tgcaccgggttgcccttt 25629184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 11054275 - 11054148
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||| |||||| |||||||||||||  ||||||||| |||||||||||||||||||  ||| || ||||||||| ||||||||| ||    
T  11054275 cacgggttcaagtcctgaaaacagtctcttgtgtaaaa--cagggtaagactgcgtacaatacaccaaa--tggcggaaccccttcccggaccctgcata 11054180  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| |||||||||||    
T  11054179 tgcgggagctctagtgcaccgggttgcccttt 11054148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 19027854 - 19027971
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||  || |||||||||||||| |  ||| |||||||    
T  19027854 cacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggctgcgtacaatacacc--aattggtgggacccctttccagactctgcgta 19027951  T
Q  231 tgcgggagcttcagtgcacc 250  Q
    || |||||||| ||||||||    
T  19027952 tgtgggagctttagtgcacc 19027971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 21489099 - 21489202
Alignment:
Q  137 ttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcggg 236  Q
    ||||||||||||||||||||||||| |||||| |||| ||||| ||||||||||| |||| |||||||||||||||||||| | ||||||||||||||||    
T  21489099 ttcaagtcctggaaacagcctcttgcgtaaaaaacagagtaagactgcgtacaatgcacc-aaaatggtgggaccccttcccgaaccctgcgtatgcggg 21489197  T
Q  237 agctt 241  Q
    |||||    
T  21489198 agctt 21489202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 135 - 259
Target Start/End: Original strand, 25343197 - 25343321
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||| ||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| || |||||||||| |    
T  25343197 ggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaagggttggaccccttcctagatcctgcgtatgtg 25343296  T
Q  235 ggagcttcagtgcaccaggttgccc 259  Q
     |||||| || ||||| || |||||    
T  25343297 agagctttagagcacccggctgccc 25343321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 25463128 - 25463256
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||| |||||||||||||| || ||| |||| ||||||||| |||||  ||||||||||||||||||| ||||||||| ||    
T  25463128 cacgggttcaagtcctggaaacaacctcttgtgtaaaaaactgggaaaggttgcgtacaacacacc--aaatggtgggaccccttcccggaccctgcata 25463225  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||  |||||||||| | ||||||    
T  25463226 tgcgggagctt-tgtgcaccaggctacccttt 25463256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 20908761 - 20908636
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    ||||||||| |||||||| | |||| | ||||| | | ||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  20908761 gttcaagtcatggaaacatcgtcttttctaaaaaagaaggtaaggctgcgtacaatacaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcgg 20908663  T
Q  236 gagcttcagtgcaccaggttgcccttt 262  Q
    |||||| ||||||| ||| ||||||||    
T  20908662 gagctttagtgcacaaggctgcccttt 20908636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 37494861 - 37494972
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||| |||  ||||||||||||||||| | |||||||||||||||     
T  37494861 ggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggttgcatacaatatacc--aaatggtgggacccctttcgggaccctgcgtatgca 37494958  T
Q  235 ggagcttcagtgca 248  Q
    ||||||| ||||||    
T  37494959 ggagctttagtgca 37494972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 250
Target Start/End: Complemental strand, 51865149 - 51865050
Alignment:
Q  149 aaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgca 248  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||| | ||||    
T  51865149 aaacagcctcttgtgtaaaaaacatggtaaggctgcgtacaatacacc--aaatggtggggccccttcccggaccctgcgtatgcgggagctttattgca 51865052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 7909397 - 7909281
Alignment:
Q  143 tcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc-gggagctt 241  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||| | ||||||||||||| ||||||||    
T  7909397 tcctggaaacagtctcttgtgtaaaa-acagggtaaggttgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcggggagctt 7909301  T
Q  242 cagtgcaccaggttgccctt 261  Q
     |||||| | ||||||||||    
T  7909300 tagtgcatcgggttgccctt 7909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 133 - 261
Target Start/End: Complemental strand, 8473747 - 8473621
Alignment:
Q  133 cgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggacccctt-cctgga-ccctgcgta 230  Q
    ||||||||||||||||||||||||||||||||  |  ||||||||||||||| |||||||||||  ||||||||||||||||| || ||| |||||| ||    
T  8473747 cgggttcaagtcctggaaacagcctcttgtgttta--acagggtaaggctgcatacaatacacc--aaatggtgggaccccttccccggacccctgcata 8473652  T
Q  231 tgcgggagcttcagtgcaccaggttgccctt 261  Q
    ||||||||||| |||||||| ||||||||||    
T  8473651 tgcgggagctttagtgcaccgggttgccctt 8473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 244
Target Start/End: Original strand, 49796818 - 49796914
Alignment:
Q  145 ctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcag 244  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||||||||||||||||    
T  49796818 ctggaaacagcctcttgtgttaaa-acatggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcgggagcttcag 49796914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 9987957 - 9987846
Alignment:
Q  137 ttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcggg 236  Q
    ||||||||||||||||| |||||||||||||  | ||||||||||||| |||||||||||  |||||||||||||||||||| |||| ||| ||||||||    
T  9987957 ttcaagtcctggaaacaacctcttgtgtaaacaatagggtaaggctgcatacaatacacc--aaatggtgggaccccttccttgaccttgcatatgcggg 9987860  T
Q  237 agcttcagtgcacc 250  Q
    ||||| | ||||||    
T  9987859 agctttaatgcacc 9987846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 39029186 - 39029081
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||| |||||||||| | |||||||||||||| ||| | ||||||||| ||||||    
T  39029186 ggttcaagccttggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaataca-cgaaaatggtgggaccactttccggaccctgcatatgcg 39029088  T
Q  235 ggagctt 241  Q
    |||||||    
T  39029087 ggagctt 39029081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 131 - 258
Target Start/End: Complemental strand, 39077923 - 39077800
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||  |||||||| |||  ||| | ||||||||| ||    
T  39077923 cacgggttcaagtcctggaaacagcctcttgtgtaaa--acagggtaaggttgcgtacaatatacc--aaatggtgagacatctttccggaccctgcata 39077828  T
Q  231 tgcgggagcttcagtgcaccaggttgcc 258  Q
    ||||||||||  |||||||| |||||||    
T  39077827 tgcgggagctctagtgcaccgggttgcc 39077800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 135 - 259
Target Start/End: Original strand, 36589753 - 36589876
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||   ||| |||||| |||||||||||||||||||||| |||||  |||||||    
T  36589753 ggttcaagtcctggaaacagcctcttgtgtaaaaaacatggtaatgctgttgacagtacacc-aaaatggtgggaccccttcctgaaccctatgtatgcg 36589851  T
Q  235 ggagcttcagtgcaccaggttgccc 259  Q
    |||||||  ||||||| || |||||    
T  36589852 ggagctttggtgcaccgggctgccc 36589876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 262
Target Start/End: Original strand, 20405109 - 20405224
Alignment:
Q  148 gaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtg 246  Q
    ||||||||||||||||||||| | |||||||||  |||||||||||||| || |||||||||||||||||| |||||| || ||||||||||||| ||||    
T  20405109 gaaacagcctcttgtgtaaaaaaacagggtaagattgcgtacaatacactaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtg 20405208  T
Q  247 caccaggttgcccttt 262  Q
    ||   |||||||||||    
T  20405209 cattgggttgcccttt 20405224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 7385605 - 7385499
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||| ||||||||||||||| ||||||||| | ||||||||| || || |||||||||  |||||||||||||| |||| |||||||| |||    
T  7385605 cacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggtaaggttgtgtgcaatacacc--aaatggtgggaccctttcccggaccctgtgta 7385508  T
Q  231 tgcgggagc 239  Q
    |||||||||    
T  7385507 tgcgggagc 7385499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 241
Target Start/End: Original strand, 10660415 - 10660519
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    |||||||||||||||||| |||||| ||||||| | |||||| |||||| ||||||||||||| ||||||| ||||||||||  || |||||||||||||    
T  10660415 gttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcatacaatacaccaataatggtgagaccccttccaaga-cctgcgtatgcgg 10660513  T
Q  236 gagctt 241  Q
    ||||||    
T  10660514 gagctt 10660519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 241
Target Start/End: Original strand, 10874560 - 10874664
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    |||||||||||||||||| |||||| ||||||| | |||||| |||||| ||||||||||||| ||||||| ||||||||||  || |||||||||||||    
T  10874560 gttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcatacaatacaccaataatggtgagaccccttccaaga-cctgcgtatgcgg 10874658  T
Q  236 gagctt 241  Q
    ||||||    
T  10874659 gagctt 10874664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 246
Target Start/End: Complemental strand, 30581593 - 30581481
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatg 232  Q
    ||||||||||| |||||||| |||||||||||||| | |||||||||| || |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  30581593 gggttcaagtcgtggaaacaacctcttgtgtaaaaaaacagggtaagggtgtgtacaatacaccaaaa-tggtgggaccccttcccggaccctgcatatg 30581495  T
Q  233 cgggagcttcagtg 246  Q
      ||||||| ||||    
T  30581494 taggagctttagtg 30581481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 33836563 - 33836487
Alignment:
Q  186 tacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| | |||||||||||    
T  33836563 tacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggttgcccttt 33836487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 36816475 - 36816384
Alignment:
Q  170 acagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||| | ||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||| |||| ||| |||||||||||    
T  36816475 acagggcagggctgcgtacaatacaccaaaaa-ggtgggactccttcctggaccctgtgtatgcgggagctttagtgtaccgggttgcccttt 36816384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 32478910 - 32478791
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||     ||||||||  ||||||||||||||||||| |||||| |||||||||    
T  32478910 ggttcaagtcctggaaacaacctctagtgtaaaa-acagggtaaggctg-----aatacacc--aaatggtgggaccccttcccggacccagcgtatgcg 32478819  T
Q  235 ggagcttcagtgcaccaggttgcccttta 263  Q
    |||||||  ||||||| ||| ||||||||    
T  32478818 ggagctt-tgtgcaccgggtggcccttta 32478791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 49938715 - 49938614
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||||||||||||||||||||||||||| || |||||||   | |||||||||||| ||||||||||||||||||||   ||||||| ||||||    
T  49938715 ggttcaagtcctggaaacagcctcttgtgtaaaa-acggggtaag---gtgtacaatacacc-aaaatggtgggaccccttcccataccctgcatatgcg 49938621  T
Q  235 ggagctt 241  Q
    |||||||    
T  49938620 ggagctt 49938614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 7038063 - 7038187
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||| ||||||| |||||||||||| | |||||||| || ||||||||||||| ||||||||||| | ||| || ||||||||||||| |     
T  7038063 ggttcaagtcctg-aaacagcttcttgtgtaaaaaatagggtaagacttcgtacaatacacc-aaaatggtggggcacctacccggaccctgcgtatac- 7038159  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||| |||||||  |||||||||||    
T  7038160 ggagctttagtgcactgggttgcccttt 7038187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 38755970 - 38755907
Alignment:
Q  200 aatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  38755970 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 38755907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 131 - 249
Target Start/End: Complemental strand, 41018922 - 41018807
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||| ||||||||||||||   ||||||||||| |||||||||||||  |||| ||||||||||||||  |||| ||||||    
T  41018922 cacgggttcaagtcctggaaacaacctcttgtgtaaaa-ttagggtaaggctacgtacaatacacc--aaatagtgggaccccttcccagaccttgcgta 41018826  T
Q  231 tgcgggagcttcagtgcac 249  Q
    ||  || |||| |||||||    
T  41018825 tggaggggctttagtgcac 41018807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 250
Target Start/End: Complemental strand, 487264 - 487138
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaa-------atggtgggaccccttcctggacc 223  Q
    |||||||||||||| |||||||| ||||||||||| || ||| ||||| |||||||||||||||| ||||       |||| |||||||||||| |||      
T  487264 cacgggttcaagtcttggaaacaacctcttgtgtataaaacaaggtaaagctgcgtacaatacactaaaatggtgggatggcgggaccccttcccggatt 487165  T
Q  224 ctgcgtatgcgggagcttcagtgcacc 250  Q
    ||||| |||||||||||| ||||||||    
T  487164 ctgcgaatgcgggagctttagtgcacc 487138  T

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Target: chr4; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 11394924 - 11394988
Alignment:
Q  199 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||||||||||| | ||||||||||||||||||||||| |||||||| ||||||||||||    
T  11394924 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 11394988  T

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Target: chr4; HSP #57
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 11404651 - 11404715
Alignment:
Q  199 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||||||||||| | ||||||||||||||||||||||| |||||||| ||||||||||||    
T  11404651 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 11404715  T

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Target: chr4; HSP #58
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 264
Target Start/End: Complemental strand, 48327869 - 48327761
Alignment:
Q  156 ctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggtt 255  Q
    ||||||||||||| |||||||||| |||| ||||||||||||| |||||||||||| ||||| | ||||  | ||||||| || || |||||||| ||||    
T  48327869 ctcttgtgtaaaaaacagggtaagactgcatacaatacaccaataatggtgggacctcttcccgaaccccacatatgcggaagttttagtgcaccgggtt 48327770  T
Q  256 gccctttac 264  Q
     ||||||||    
T  48327769 accctttac 48327761  T

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Target: chr4; HSP #59
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 250
Target Start/End: Complemental strand, 23580337 - 23580220
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||| || |||| |||||||||||||||| |||||| ||| |||||||  ||||||| ||||||| | ||||||||| |||| |||| |||    
T  23580337 cacgggttcaagttctagaaagagcctcttgtgtaaaaaacaggggaagactgcgtaggatacacc-aaaatggcgagaccccttcttgga-cctgtgta 23580240  T
Q  231 tgcgggagcttcagtgcacc 250  Q
    || |||||||| ||||||||    
T  23580239 tgtgggagctttagtgcacc 23580220  T

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Target: chr4; HSP #60
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 47441655 - 47441551
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||||  ||||||| ||||| |||||||  ||||||||||||| ||||||||||||  ||||||| ||||||||||| |||||||| ||| ||     
T  47441655 ggttcaagtccaagaaacagtctcttttgtaaaaatcagggtaaggctgtgtacaatacacc--aaatggttggaccccttcccggaccctgagtaagca 47441558  T
Q  235 ggagctt 241  Q
    |||||||    
T  47441557 ggagctt 47441551  T

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Target: chr4; HSP #61
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 55830844 - 55830721
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    ||||||||  ||||||||| |||||||||  || ||||||||| ||||||||||||||||  ||  |||||| ||||| ||| ||||| ||||||||||     
T  55830844 gttcaagttttggaaacagtctcttgtgtgtaa-acagggtaatgctgcgtacaatacactgaa--tggtggaaccccatcccggaccttgcgtatgcga 55830748  T
Q  236 gagcttcagtgcaccaggttgcccttt 262  Q
    |||||| ||||||||||| ||||||||    
T  55830747 gagctttagtgcaccaggatgcccttt 55830721  T

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Target: chr4; HSP #62
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 40553998 - 40553936
Alignment:
Q  201 atggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  40553998 atggtgtgaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttta 40553936  T

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Target: chr4; HSP #63
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 136 - 241
Target Start/End: Original strand, 54967032 - 54967134
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    |||||||| ||||||| | |||||||||||||| ||||||||||| ||| ||||||| |||  ||||||||||||||||||| | ||||| | |||||||    
T  54967032 gttcaagttctggaaagaacctcttgtgtaaaaaacagggtaaggttgc-tacaatatacc--aaatggtgggaccccttcccgtaccctacatatgcgg 54967128  T
Q  236 gagctt 241  Q
    ||||||    
T  54967129 gagctt 54967134  T

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Target: chr4; HSP #64
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 10277884 - 10277781
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||| |||| ||||||||||||||| ||||  | ||| |||||||||||||||||||||  ||||||||  |||||||||  |||||||| ||    
T  10277884 cacgggttcaaatccttgaaacagcctcttgtataaa--ataggataaggctgcgtacaatacacc--aaatggtgaaaccccttcccagaccctgcata 10277789  T
Q  231 tgcgggag 238  Q
    ||||||||    
T  10277788 tgcgggag 10277781  T

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Target: chr4; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 32484307 - 32484368
Alignment:
Q  201 atggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||||||| ||||||||| ||||||||||||| |||||||| |||||||||||    
T  32484307 atggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgcccttt 32484368  T

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Target: chr4; HSP #66
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 262
Target Start/End: Complemental strand, 55766591 - 55766466
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||  |||||||||  ||||||||  || ||||||||||||||||||||||||||    |||||||| ||||| ||| ||||| |||||||||    
T  55766591 gggttcaagttttggaaacagtttcttgtgtgtaa-acagggtaaggctgcgtacaatacac--tgaatggtggaaccccatcccggaccttgcgtatgc 55766495  T
Q  234 gggagcttcagtgcaccaggttgcccttt 262  Q
    | |||||| |||||||| || ||||||||    
T  55766494 gagagctttagtgcaccgggatgcccttt 55766466  T

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Target: chr4; HSP #67
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 16494262 - 16494338
Alignment:
Q  170 acagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtg 246  Q
    ||||||||| ||||| ||||||||||||||||||||||||||| ||||  ||||||| |||||||| ||||| ||||    
T  16494262 acagggtaaagctgcatacaatacaccaaaaatggtgggaccctttcccagaccctgtgtatgcggaagctttagtg 16494338  T

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Target: chr4; HSP #68
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 250
Target Start/End: Complemental strand, 30496449 - 30496334
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||| ||||||||| ||||||||||||||||||| ||| || |||||||||||| |||||||||||  |||||| ||||| |||||| ||||| ||| ||    
T  30496449 cacgtgttcaagtcatggaaacagcctcttgtgt-aaacac-gggtaaggctgcatacaatacacc--aaatggggggactccttcccggaccgtgctta 30496354  T
Q  231 tgcgggagcttcagtgcacc 250  Q
    ||  ||||||| ||||||||    
T  30496353 tgatggagctttagtgcacc 30496334  T

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Target: chr4; HSP #69
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 25388249 - 25388312
Alignment:
Q  200 aatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||| ||||||||||||    
T  25388249 aatggtgggaccccttcccggaccctgcgtatgcatgagctttagtgcaccgggttgcccttta 25388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 38786681 - 38786744
Alignment:
Q  199 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||||||||| ||||||||| ||||||||||||  |||||||| |||||||||||    
T  38786681 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 38786744  T

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Target: chr4; HSP #71
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 47482918 - 47482871
Alignment:
Q  194 accaaaaatggtgggaccccttcctggaccctgcgtatgcgggagctt 241  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  47482918 accaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctt 47482871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 262
Target Start/End: Original strand, 2813170 - 2813263
Alignment:
Q  170 acagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagc-ttcagtgcaccaggttgcccttt 262  Q
    |||||||||| |||||||||||||| ||| ||||||||||||| |||| | ||  ||||||||||||||| || |||||||| | |||||||||    
T  2813170 acagggtaagactgcgtacaatacatcaataatggtgggaccctttcccgaacgatgcgtatgcgggagctttaagtgcaccggattgcccttt 2813263  T

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Target: chr4; HSP #73
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 51420586 - 51420646
Alignment:
Q  137 ttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacacca 197  Q
    |||||||| |||||||| ||||||||||| || |||||||||||||| |||||||||||||    
T  51420586 ttcaagtcatggaaacaacctcttgtgtagaaaacagggtaaggctgggtacaatacacca 51420646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 32629397 - 32629293
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||| |||| |||||||||||||||  |||| |||||||||||| || ||| ||||||| ||| ||| |||||||||||| ||||| ||||||    
T  32629397 cacgggttcaaatcctcgaaacagcctcttgt-aaaaaaacagggtaaggccgcctac-atacacc-aaattggcgggaccccttcccggaccttgcgta 32629301  T
Q  231 tgcgggag 238  Q
    || |||||    
T  32629300 tgtgggag 32629293  T

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Target: chr4; HSP #75
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 14590843 - 14590922
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgt-aaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggacc 211  Q
    ||||| |||||||||| ||||||||||||||| | |||| ||||||||||||||| ||||||||| |  |||||||||||||    
T  14590843 cacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgcatacaatacatc--aaatggtgggacc 14590922  T

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Target: chr4; HSP #76
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 35532077 - 35532127
Alignment:
Q  212 ccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  35532077 ccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 35532127  T

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Target: chr4; HSP #77
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 42164277 - 42164224
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcg 185  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  42164277 cacgggttcaagtcttggaaacaacctcttgtgtaaaa-acagggtaaggctgcg 42164224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 44718641 - 44718703
Alignment:
Q  201 atggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    |||||||||||||||||  |||||||||||||||||||||| ||  |||| ||||||||||||    
T  44718641 atggtgggaccccttcccagaccctgcgtatgcgggagctttagcacaccgggttgcccttta 44718703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 17079777 - 17079691
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggac 222  Q
    ||||||||||| ||||||||   ||||||||| || ||||||||||||||| |||||||| |   |||||||||||||| |||||||||    
T  17079777 gggttcaagtcttggaaacaatatcttgtgtataaaacagggtaaggctgcatacaatacgc--taaatggtgggaccctttcctggac 17079691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 35894563 - 35894492
Alignment:
Q  159 ttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtat 231  Q
    |||||||||| ||| ||||||  ||||||||||||||| |||||||||||||||||||| ||| | |||||||    
T  35894563 ttgtgtaaaaaacacggtaagtgtgcgtacaatacacc-aaaatggtgggaccccttcccggatcatgcgtat 35894492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 3580945 - 3580861
Alignment:
Q  155 cctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagctt 241  Q
    ||||||||||||||  || |||||||||| || |||||||||  ||||| | ||||||||||| ||||||||| |||| ||||||||    
T  3580945 cctcttgtgtaaaaaccatggtaaggctgtgtgcaatacacc--aaatgctaggaccccttcccggaccctgcatatgtgggagctt 3580861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 50555718 - 50555656
Alignment:
Q  200 aatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||| ||||||||| ||||||||||||||| |||| || |||||||| || ||||||||    
T  50555718 aatggtggaaccccttcccggaccctgcgtatgcaggagttttagtgcaccgggctgcccttt 50555656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 43035254 - 43035307
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgc 184  Q
    ||||||||||||||| ||||||| |||||||||||| | ||| |||||||||||    
T  43035254 cacgggttcaagtccaggaaacaacctcttgtgtaagaaacacggtaaggctgc 43035307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 54640468 - 54640431
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaa 168  Q
    |||||||||||||| |||||||||||||||||||||||    
T  54640468 cacgggttcaagtcttggaaacagcctcttgtgtaaaa 54640431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 250
Target Start/End: Original strand, 48033379 - 48033449
Alignment:
Q  180 gctgcgtacaatacaccaaaaatggt-gggaccccttcctggaccctgcgtatgcgggagcttcagtgcacc 250  Q
    |||| ||| |||||||| |||||||| ||||||||||  |||||| ||||||||||||||||| ||||||||    
T  48033379 gctgtgtataatacacc-aaaatggtggggacccctttgtggaccttgcgtatgcgggagctttagtgcacc 48033449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 8820581 - 8820643
Alignment:
Q  200 aatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||||||||  ||||||||||||||| ||| || |||||| ||| ||| |||||    
T  8820581 aatggtgggaccccttcccagaccctgcgtatgcgagagttttagtgcatcagattgtccttt 8820643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 12711537 - 12711450
Alignment:
Q  172 agggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccctt 261  Q
    |||||||| ||||||||||||||||  |||||| |||||||||||   ||||  |||||||||| | ||| ||||||||  |||||||||    
T  12711537 agggtaagactgcgtacaatacacc--aaatggcgggaccccttctcagacctagcgtatgcggaaactttagtgcacccagttgccctt 12711450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 17315427 - 17315375
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgc 184  Q
    ||||||||||| |||| |||||| |||||||||||||| ||| |||||||||||    
T  17315427 cacgggttcaattcctcgaaacaacctcttgtgtaaaa-acaaggtaaggctgc 17315375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 41549388 - 41549425
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaa 168  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  41549388 cacgggttcaagttctggaaacaacctcttgtgtaaaa 41549425  T

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Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 49938561 - 49938490
Alignment:
Q  137 ttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggac 210  Q
    |||||||| ||||| |||| | |||||||||| ||||||||||||||||| |||| || | |||||||||||||    
T  49938561 ttcaagtcttggaagcagcgtattgtgtaaaa-acagggtaaggctgcgtccaattcatc-aaaatggtgggac 49938490  T

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Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 19027986 - 19028046
Alignment:
Q  202 tggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||| |||||| ||||||  | ||||||||||||| |||||||| || ||||||||    
T  19027986 tggtgggactccttcccggaccccacttatgcgggagctttagtgcaccgggctgcccttt 19028046  T

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Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 37038164 - 37038132
Alignment:
Q  221 accctgcgtatgcgggagcttcagtgcaccagg 253  Q
    ||||||||||||||||||||| |||||||||||    
T  37038164 accctgcgtatgcgggagctttagtgcaccagg 37038132  T

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Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 94)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 10668254 - 10668385
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| |||||||||||||||||| || |||||||||    
T  10668254 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggtccctgcgta 10668353  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  10668354 tgcgggagctttagtgcaccgggttgcccttt 10668385  T

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Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 30395857 - 30395726
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||    
T  30395857 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcata 30395758  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| ||||||||  ||||||||||    
T  30395757 tgcgggagctttagtgcaccgagttgcccttt 30395726  T

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Target: chr1; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 35005152 - 35005283
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||| || |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  35005152 cacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcccggaccctgcgta 35005251  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||| |||| |||||||| |||||||||||    
T  35005252 tgcgggcgctttagtgcaccgggttgcccttt 35005283  T

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Target: chr1; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 18944676 - 18944804
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  18944676 ggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaacaatggtgggaccccttcccggaccctgcgtatgcg 18944775  T
Q  235 ggagc-ttcagtgcaccaggttgcccttt 262  Q
    ||||| || |||||||| |||||||||||    
T  18944776 ggagcttttagtgcaccgggttgcccttt 18944804  T

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Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 134 - 262
Target Start/End: Original strand, 27201679 - 27201807
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  27201679 gggttcaagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccttgcgtatgc 27201778  T
Q  234 gggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||| ||||||   |||||||||||    
T  27201779 gggagctttagtgcattgggttgcccttt 27201807  T

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Target: chr1; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 46248082 - 46247953
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  46248082 cacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacc--aaatggtgggaccccttcccggaccctgcgta 46247985  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||| ||| |||||||||||    
T  46247984 tgcgggagctttagtgtaccgggttgcccttt 46247953  T

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Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 20004221 - 20004090
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||  ||||| || ||    
T  20004221 cacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagaccccgcata 20004122  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  20004121 tgcgggagctttagtgcaccgggttgcccttt 20004090  T

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Target: chr1; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 32632685 - 32632557
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||   ||||||| ||    
T  32632685 cacgggttcaagtcctggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccaaaccctgcata 32632589  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| ||||||||||||| ||||||    
T  32632588 tgcgggagcttgagtgcaccaggtttcccttt 32632557  T

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Target: chr1; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 34725225 - 34725098
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||  |||||||||||||||| ||||||||| ||    
T  34725225 cacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacactaaa--tggtgggaccccttcccggaccctgcata 34725130  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| |||||||||||    
T  34725129 tgcgggagctctagtgcaccgggttgcccttt 34725098  T

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Target: chr1; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 46991833 - 46991959
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||   |||||||||||||||||| ||||||||||||    
T  46991833 cacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtacaatacacc--gaatggtgggaccccttcccggaccctgcgta 46991930  T
Q  231 tgcgggagcttcagtgcaccaggttgccc 259  Q
    || |||||||| |||||||| ||||||||    
T  46991931 tgtgggagctttagtgcaccgggttgccc 46991959  T

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Target: chr1; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 131 - 250
Target Start/End: Complemental strand, 35117897 - 35117777
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt- 229  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||     
T  35117897 cacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggctgtgtacaatacaccaaaaatgatgggaccccttcccggaccctgcgta 35117798  T
Q  230 atgcgggagcttcagtgcacc 250  Q
    |||| ||||||| ||||||||    
T  35117797 atgcaggagctttagtgcacc 35117777  T

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Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 35253314 - 35253187
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||    
T  35253314 cacgggttcaagtcctcgaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcata 35253219  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| | |||||||||    
T  35253218 tgcgggagctctagtgcaccggattgcccttt 35253187  T

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Target: chr1; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 11596542 - 11596649
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  11596542 cacgggttcaagtcctagaaacaacctcttgtgtaaaa-acagggtaaggctgcgtataatacaccaaa--tggtgggaccccttcctggaccctgcgta 11596638  T
Q  231 tgcgggagctt 241  Q
    |||||||||||    
T  11596639 tgcgggagctt 11596649  T

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Target: chr1; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 134 - 260
Target Start/End: Original strand, 22324925 - 22325049
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |||| |||  ||||||||||||||    
T  22324925 gggttcaagtcttggaaacagcctcttgtgtaaaa-acagggtaaggctgcatacaatacaccaaaaatggtggagccccgtcc-cgaccctgcgtatgc 22325022  T
Q  234 gggagcttcagtgcaccaggttgccct 260  Q
    |||||||| ||||||||||| ||||||    
T  22325023 gggagctttagtgcaccaggctgccct 22325049  T

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Target: chr1; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 23768445 - 23768334
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||  |||||||||||||||    
T  23768445 ggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc--aaatggtgggacaccttcccagaccctgcgtatgcg 23768348  T
Q  235 ggagcttcagtgca 248  Q
    ||||||| ||||||    
T  23768347 ggagctttagtgca 23768334  T

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Target: chr1; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 38478409 - 38478282
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||| ||||||||  ||||||||| ||    
T  38478409 cacgggttcaagtcctagaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtggaaccccttctcggaccctgcata 38478314  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| |||||||||||    
T  38478313 tgcgggagctctagtgcaccgggttgcccttt 38478282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 6925129 - 6925246
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||| |||||||||||||||| | |||||||||||||| ||||||||||   |||||||||||||||||| || |||||||||    
T  6925129 cacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggctgcggacaatacacc--gaatggtgggaccccttcccggtccctgcgta 6925226  T
Q  231 tgcgggagcttcagtgcacc 250  Q
    ||||||||||| ||||||||    
T  6925227 tgcgggagctttagtgcacc 6925246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 14617067 - 14617196
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||| ||||||||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||  ||||||||||| ||||||| ||||||||| ||    
T  14617067 cacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggtaaggttgcgtacaatacacc--aaatggtgggatcccttcccggaccctgcata 14617164  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||| ||||||    
T  14617165 tgcgggagctttagtgcaccgggttacccttt 14617196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 31382330 - 31382214
Alignment:
Q  143 tcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttc 242  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||     
T  31382330 tcctggaaacagcctcttgtgtaaaa-acaggataaggctgcgtacaatacaccaaa--tggtgggaccccttcctggaccctgcatatgcgggagcttt 31382234  T
Q  243 agtgcaccaggttgcccttt 262  Q
    | || ||| |||||||||||    
T  31382233 actgtaccgggttgcccttt 31382214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 264
Target Start/End: Original strand, 4349699 - 4349798
Alignment:
Q  163 gtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  4349699 gtaaaaaacagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 4349796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 19932856 - 19932755
Alignment:
Q  159 ttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcc 258  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  || | | ||||||||||||||||    
T  19932856 ttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcaagatcattagtgcaccaggttgcc 19932757  T
Q  259 ct 260  Q
    ||    
T  19932756 ct 19932755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 9939490 - 9939622
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtggga-ccccttcctggaccctgcgt 229  Q
    |||| |||||||||||||||||| |||||||| ||| | ||| ||||||| ||||| |||||||||||||||||||||| |||||||  |||||||||||    
T  9939490 cacgagttcaagtcctggaaacaacctcttgtttaagaaacatggtaaggttgcgtgcaatacaccaaaaatggtgggacccccttctcggaccctgcgt 9939589  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||| |||||||| |||| ||||||    
T  9939590 atgcgggagctttagtgcaccgggttacccttt 9939622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 41319931 - 41319806
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||||| | ||||| | ||||||    
T  41319931 ggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc--aaatgatgggaccccttcccgaacccttcatatgcg 41319834  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    |||| ||||||||||  |||||||||||    
T  41319833 ggagtttcagtgcactgggttgcccttt 41319806  T

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Target: chr1; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 259
Target Start/End: Original strand, 45402124 - 45402251
Alignment:
Q  132 acgggttcaagtcctggaaacagcctcttgtgtaaaagacagggt--aagg-ctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcg 228  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  |||  |||||||||||||||||||  ||||||||||||||||  |||||||||    
T  45402124 acgggttcaagtcctggaaacagcctcttgtgtaaaa-acagggttcaagttctgcgtacaatacaccaaa--tggtgggaccccttcccagaccctgcg 45402220  T
Q  229 tatgcgggagcttcagtgcaccaggttgccc 259  Q
    ||||||||||||| |||||||| ||||||||    
T  45402221 tatgcgggagctttagtgcaccgggttgccc 45402251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 15511271 - 15511150
Alignment:
Q  140 aagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcg--tacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcggga 237  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||  ||||||||||||||| |||||| |||||||||||||||||||||||| | ||    
T  15511271 aagtcctggaaaccgcctcttgtgtaaaaaacagggtaaggctgcggatacaatacaccaaaa-tggtggtaccccttcctggaccctgcgtatgtgtga 15511173  T
Q  238 gcttcagtgcaccaggttgccct 260  Q
    |||| |||||||| || ||||||    
T  15511172 gctttagtgcaccgggctgccct 15511150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 18724674 - 18724566
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||  ||||  ||||||||||||| ||||||| | ||    
T  18724674 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacacc--aaatcttgggaccccttcccggaccctacata 18724577  T
Q  231 tgcgggagctt 241  Q
    |||||||||||    
T  18724576 tgcgggagctt 18724566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 19701599 - 19701729
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||| ||||| || |||||||||||||||||||| ||  ||||||| || |||||||||||||||| ||||||| |||||||| ||||||||||||    
T  19701599 cacgggtttaagtcatgaaaacagcctcttgtgtaaaaaacttggtaaggatgggtacaatacaccaaaa-tggtggggccccttcccggaccctgcgta 19701697  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| ||||||||||| | ||||||    
T  19701698 tgcgggagctttagtgcaccaggctacccttt 19701729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 18742054 - 18741957
Alignment:
Q  165 aaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| |||||||| |||| ||||||    
T  18742054 aaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccagaccctgcgtatgcgagagctttagtgcaccgggtttcccttt 18741957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 19414468 - 19414595
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||| |||| |||||||| |||||||  |||| ||||||||||||||||||||||||  |||||||||||||||| | ||||||| ||    
T  19414468 cacgggttcaagtcctagaaagagcctcttatgtaaaa--caggttaaggctgcgtacaatacaccaaa--tggtgggaccccttcccgtaccctgcata 19414563  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||| |||||||||||    
T  19414564 tgcgggagctctagtgcaccgggttgcccttt 19414595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 47214540 - 47214667
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||| ||||||| |||||  |||||||||| ||||||||||||||||||  ||||||||||||||||  |||||||| ||    
T  47214540 cacgggttcaagtcctggaaacagtctcttgtttaaaa--cagggtaaggttgcgtacaatacaccaaa--tggtgggaccccttcccagaccctgcata 47214635  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||||| || ||||||    
T  47214636 tgcgggagctctagtgcaccagattacccttt 47214667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 27474314 - 27474438
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||||||||| ||||||||| ||||||||||||| |||||| || ||||||||||||||||  ||  |||||||||||||||| ||||||||||||||||    
T  27474314 ggttcaagtcttggaaacagtctcttgtgtaaaa-acagggcaaagctgcgtacaatacactgaa--tggtgggaccccttcccggaccctgcgtatgcg 27474410  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||| |||||||| | |||||||||    
T  27474411 ggagctttagtgcaccggattgcccttt 27474438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 250
Target Start/End: Complemental strand, 2435916 - 2435798
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||| ||||| ||| | |||||||| |||||||||||||||| |||||||||||||||||| | | ||||| || |    
T  2435916 cacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaagcctgcgtacaatacacc-aaaatggtgggacccctttccgtaccctccgca 2435818  T
Q  231 tgcgggagcttcagtgcacc 250  Q
    ||||||||||| ||||||||    
T  2435817 tgcgggagctttagtgcacc 2435798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 17470472 - 17470361
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||| ||||||   ||||||||||     
T  17470472 gggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc-aaaatagtgggacccgttcctg--acctgcgtatgt 17470376  T
Q  234 gggagcttcagtgca 248  Q
    |||||||| ||||||    
T  17470375 gggagctttagtgca 17470361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 12126964 - 12126837
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||| |||| ||||||||||| ||||||||||||  |||||||||||||||||||||||||||||  | |||||||||||||| ||||||||| ||    
T  12126964 cacgggtttaagttctggaaacagcttcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--ttgtgggaccccttcccggaccctgcata 12126869  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||  |||||||   ||||||||||    
T  12126868 tgcgggagctgtagtgcactgcgttgcccttt 12126837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 42304299 - 42304207
Alignment:
Q  170 acagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||||| | |||||||||    
T  42304299 acagggtaaggttgcgtacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccggattgcccttt 42304207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 134 - 240
Target Start/End: Complemental strand, 25468389 - 25468285
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||| |||||||||||||||  ||||||| ||||| |||||  ||||||||||||||    
T  25468389 gggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaatacacc--aaatggttggacctcttcccagaccctgcgtatgc 25468292  T
Q  234 gggagct 240  Q
    |||||||    
T  25468291 gggagct 25468285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 131 - 250
Target Start/End: Complemental strand, 27136781 - 27136663
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||| |||||||| |||| |||| |||||||||||||| ||| ||||||| ||||||||||||||| ||||||||||||||||||||| || | || |||    
T  27136781 cacgagttcaagttctgggaacaacctcttgtgtaaaaaacatggtaaggttgcgtacaatacacc-aaaatggtgggaccccttcctagatcatgtgta 27136683  T
Q  231 tgcgggagcttcagtgcacc 250  Q
    |||||||||| |||||||||    
T  27136682 tgcgggagctccagtgcacc 27136663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 44485238 - 44485130
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||  ||||||||||||| || ||||||||||||||| |||||||||||||||||||||||  ||||||| ||||||||||| ||| ||| ||||    
T  44485238 cacgggttatagtcctggaaacaaccacttgtgtaaaagacatggtaaggctgcgtacaatacacc--aaatggttggaccccttcccggatcctacgta 44485141  T
Q  231 tgcgggagctt 241  Q
    |||||||||||    
T  44485140 tgcgggagctt 44485130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 45264524 - 45264411
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    |||||||||||||||||| ||||||||| |||| |||| ||||||||| || ||||||||| |||||||||||||||||||   |||||||| |||||||    
T  45264524 gttcaagtcctggaaacaacctcttgtgcaaaaaacagagtaaggctgtgtgcaatacacc-aaaatggtgggaccccttctcagaccctgcatatgcgg 45264426  T
Q  236 gagcttcagtgcacc 250  Q
    |||||| ||||||||    
T  45264425 gagctttagtgcacc 45264411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 45812660 - 45812541
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||| |||||| |||||||||||||||  |||||||||||| ||||||||||||||  ||||||||||||||||   ||||||| ||||||    
T  45812660 ggttcaagtcctgaaaacagtctcttgtgtaaaaga--gggtaaggctgcatacaatacaccaaa--tggtgggaccccttcccaaaccctgcatatgcg 45812565  T
Q  235 ggagcttcagtgcaccaggttgcc 258  Q
    ||||||  |||||||| |||||||    
T  45812564 ggagctctagtgcaccgggttgcc 45812541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 8197072 - 8197201
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||| ||  ||||||||||||||| ||| ||||||||| |||||| ||||||  ||||||| ||||||||||  ||||||||||||    
T  8197072 cacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggtaaggctacgtacagtacacc--aaatggtaggaccccttctcggaccctgcgta 8197169  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||  ||||||| |||| ||| |||||||||||    
T  8197170 tgttggagctttagtgtaccgggttgcccttt 8197201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 10378825 - 10378738
Alignment:
Q  170 acagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccc 259  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||| ||||||||||||| |||||||| || |||||    
T  10378825 acagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcttggaccctgcatatgcgggagctttagtgcaccgggctgccc 10378738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 50606487 - 50606561
Alignment:
Q  188 caatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||| |||||||||||    
T  50606487 caatacaccaaaaatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgcccttt 50606561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 6983934 - 6983811
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||||||||||||||  || ||||| ||||||||||  ||||||||||||||||||  |||||||||||||| | |||||||||||| ||     
T  6983934 ggttcaagtcctggaaacagcctc--gtataaaaaacagggtaagtatgcgtacaatacaccaaa--tggtgggacccctttccggaccctgcgtaggca 6983839  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||  ||||||| || ||||||||    
T  6983838 ggagctttggtgcaccgggctgcccttt 6983811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 23796507 - 23796623
Alignment:
Q  144 cctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttca 243  Q
    |||||||||||||||||||||||||  ||  |||||| |||||||||||||||  |||||||| ||||||||||  |||||||| ||||| ||||||| |    
T  23796507 cctggaaacagcctcttgtgtaaaaatcaatgtaaggttgcgtacaatacacc--aaatggtgagaccccttcccagaccctgcatatgctggagcttta 23796604  T
Q  244 gtgcaccaggttgcccttt 262  Q
    ||||||| || ||||||||    
T  23796605 gtgcaccgggctgcccttt 23796623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 136 - 259
Target Start/End: Complemental strand, 39215083 - 39214961
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 235  Q
    |||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||  || ||||||||||| ||||||||   |||||||||||| ||    
T  39215083 gttcaagtactggaaacaacctcttgtgtaaaaaactgggtaaggctgcgtacaatattcc-aaaatggtgggtccccttcccaaaccctgcgtatgtgg 39214985  T
Q  236 gagcttcagtgcaccaggttgccc 259  Q
     ||||| |||||||| || |||||    
T  39214984 aagctttagtgcaccgggctgccc 39214961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 22930193 - 22930104
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgc 227  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| || | ||||||||||  |||||||||||||||||||||||||||||    
T  22930193 gggttcaagtcctggaaacagccttttgtgtaaaa-acagggtaaggttgtg-acaatacacc--aaatggtgggaccccttcctggaccctgc 22930104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 20036249 - 20036355
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaa-agacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||||||||||||||||||||||  |||||||||||| ||| ||||||||  ||||| |||||||||  ||||||||| ||||||||| |||||||||||    
T  20036249 cacgggttcaagtcctggaaacaaactcttgtgtaaagagaaagggtaagattgcgttcaatacacc--aaatggtggaaccccttcccggaccctgcgt 20036346  T
Q  230 atgcgggag 238  Q
    |||| ||||    
T  20036347 atgcaggag 20036355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 262
Target Start/End: Original strand, 50811979 - 50812098
Alignment:
Q  142 gtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagct 240  Q
    |||||||||||||| |||||||||||| | |||||||||| ||||||||||||||| |||||||| ||||||||||| |  |||||||||||||||||||    
T  50811979 gtcctggaaacagcttcttgtgtaaaaaaacagggtaaggttgcgtacaatacacc-aaaatggt-ggaccccttcccgcgccctgcgtatgcgggagct 50812076  T
Q  241 tcagtgcaccaggttgcccttt 262  Q
    | | |||||  || ||||||||    
T  50812077 ttaatgcactgggctgcccttt 50812098  T

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Target: chr1; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 255
Target Start/End: Complemental strand, 31442515 - 31442396
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||| | |||||||||| || ||||||| | |||||||||| ||||||||||||||||||| |||||||||||||||| |||| ||| ||||| |    
T  31442515 gttcaagtcttagaaacagccttttatgtaaaaaaacagggtaaggatgcgtacaatacaccaaaa-tggtgggaccccttcccggacactgtgtatgtg 31442417  T
Q  235 ggagcttcagtgcaccaggtt 255  Q
    |||||||  ||||||| ||||    
T  31442416 ggagctttggtgcaccgggtt 31442396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 19974203 - 19974074
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||| |||||||||||||  |||||||| | |||| |||| ||||||||||||||| |||||| |||||||| |||| |||| ||  |||    
T  19974203 cacgggttcaagtcttggaaacagcctcaagtgtaaaa-atagggcaaggttgcgtacaatacacc-aaaatgatgggacccattcccggactctatgta 19974106  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||  || ||||||||    
T  19974105 tgcgggagctttagtgcacggggctgcccttt 19974074  T

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Target: chr1; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 1517418 - 1517311
Alignment:
Q  154 gcctcttgtgt-aaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccag 252  Q
    ||||||||||| |||| ||| | |||||||||||||||||||||||   |||||||||||||||   |||||||||||||| ||||||| |||||||| |    
T  1517418 gcctcttgtgttaaaaaacatgataaggctgcgtacaatacaccaat--tggtgggaccccttctcagaccctgcgtatgcaggagctttagtgcaccgg 1517321  T
Q  253 gttgcccttt 262  Q
    ||||||||||    
T  1517320 gttgcccttt 1517311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 20999957 - 20999850
Alignment:
Q  153 agcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccag 252  Q
    |||| ||||||||||| ||| || ||||||||||||||||||||  ||||| |||| |||||||| | |||||||||| |||||||||| |||||||| |    
T  20999957 agccacttgtgtaaaaaacaaggcaaggctgcgtacaatacacc--aaatgatggggccccttccggcaccctgcgtacgcgggagctttagtgcaccgg 20999860  T
Q  253 gttgcccttt 262  Q
    | ||||||||    
T  20999859 gctgcccttt 20999850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 15505631 - 15505701
Alignment:
Q  169 gacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagctt 241  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||| | |||||||||||||||||||||    
T  15505631 gacagggtaagactgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcgggagctt 15505701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 19656220 - 19656105
Alignment:
Q  146 tggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagt 245  Q
    ||||||||||||||||||||||| ||| ||||| |||  |||||||||||| |||||||| |||||| ||| |||||||||| |||||  |||||| | |    
T  19656220 tggaaacagcctcttgtgtaaaaaacatggtaacgctatgtacaatacacc-aaaatggtaggaccctttcttggaccctgcatatgcaagagctttaat 19656122  T
Q  246 gcaccaggttgcccttt 262  Q
    ||||| || ||||||||    
T  19656121 gcaccgggctgcccttt 19656105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 239
Target Start/End: Complemental strand, 34149076 - 34148983
Alignment:
Q  144 cctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagc 239  Q
    |||||||||||||||||||||| || | ||||||||| ||||||||| | |||  |||||||| |||||||||||||||||||| ||||| |||||    
T  34149076 cctggaaacagcctcttgtgtagaaaatagggtaaggttgcgtacaaaagacc--aaatggtgagaccccttcctggaccctgcatatgcaggagc 34148983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 22327130 - 22327197
Alignment:
Q  133 cgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaa 200  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| || ||||||||    
T  22327130 cgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtacgatgcaccaaaa 22327197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 50760355 - 50760288
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaa 198  Q
    ||||||||||||||||| ||||||||||||||||| || || ||||||||||||||| ||||||||||    
T  50760355 cacgggttcaagtcctgaaaacagcctcttgtgtataaaactgggtaaggctgcgtataatacaccaa 50760288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 4587626 - 4587568
Alignment:
Q  199 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgc 257  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  4587626 aaatggtgggaccccttcccggaccctgcctatgcgggagcttcagtgcaccgggttgc 4587568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 33223013 - 33223093
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggacccc 213  Q
    ||||| || ||||| ||||||||||||||||||||||| |||||| |||| ||||||||||||||| ||||||||||||||||    
T  33223013 cacggatttaagtcatggaaacagcctcttgtgtaaaa-acagggaaaggttgcgtacaatacacc-aaaatggtgggacccc 33223093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 262
Target Start/End: Original strand, 43768207 - 43768297
Alignment:
Q  170 acagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||||||| |||||||||||||   ||||||||||||||||  |||||||||||| ||||||||| | |||||| || ||||||||    
T  43768207 acagggtaaggctgcctacaatacaccaat--tggtgggaccccttcccagaccctgcgtatacgggagctttaatgcaccgggctgcccttt 43768297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 23371153 - 23371268
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||| ||||||||| |||| |||||| || ||| |||| || ||||||||||||  ||||| |||||||||||||  |||||||||||    
T  23371153 cacgggttcaagtcctagaaacagccacttgggtaaaaaac-gggcaaggttgtgtacaatacacc--aaatgctgggaccccttcc-agaccctgcgta 23371248  T
Q  231 tgcgggagcttcagtgcacc 250  Q
    || || ||||| ||||||||    
T  23371249 tgtggtagctttagtgcacc 23371268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 5549580 - 5549677
Alignment:
Q  165 aaaagacagggtaaggctgcgtacaatacacc-aaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||| ||||||||| |||||| |||||||||| ||||||| ||||||||||| |||||| |||| ||||| ||||||| ||| || |||||||||||||    
T  5549580 aaaaaacagggtaaagctgcgcacaatacaccaaaaaatgatgggacccctttctggactctgcctatgcaggagctttagtaca-caggttgcccttt 5549677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 24564379 - 24564441
Alignment:
Q  137 ttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    |||||||| |||||||| |||||||||||||| ||||||||||| |||||||||| |||||||    
T  24564379 ttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaagggtgcgtacaattcaccaaa 24564441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 35019265 - 35019375
Alignment:
Q  137 ttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcggg 236  Q
    ||||||||||| ||||| |||||||| |||||  |||  ||||||||| |||||||||||  || |||||||||||| |||  ||||||||||||||| |    
T  35019265 ttcaagtcctgtaaacaacctcttgtataaaaatcagtataaggctgcatacaatacacc--aattggtgggacccc-tcccagaccctgcgtatgcgag 35019361  T
Q  237 agcttcagtgcacc 250  Q
    ||||| ||||||||    
T  35019362 agctttagtgcacc 35019375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 133 - 241
Target Start/End: Original strand, 30682845 - 30682949
Alignment:
Q  133 cgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatg 232  Q
    ||||||||| ||||| ||| |||||||||||||||| ||| ||||||  || |||| |||||  | ||||||||||||||||||| ||||| ||||||||    
T  30682845 cgggttcaaatcctgaaaatagcctcttgtgtaaaa-acaaggtaagattgtgtac-ataca--acaaatggtgggaccccttcccggaccgtgcgtatg 30682940  T
Q  233 cgggagctt 241  Q
    |||||||||    
T  30682941 cgggagctt 30682949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 4430155 - 4430087
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    |||||||| ||||| || ||||||  |||||||||||| |||||||||| |||||||||||||||||||    
T  4430155 cacgggtttaagtcttgaaaacagtatcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaa 4430087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 31272499 - 31272397
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||  ||| |  ||||||||||     |||| ||||||||||||||||    
T  31272499 ggttcaagtcctggaaacaacctcttgtgtaaaa-acatggtaaggctgcgtacagcacatc--aaatggtggg-----ttcc-ggaccctgcgtatgcg 31272409  T
Q  235 ggagcttcagtg 246  Q
    ||||||| ||||    
T  31272408 ggagctttagtg 31272397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 259
Target Start/End: Original strand, 52910250 - 52910379
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaaga-cagggtaaggctgcgtacaatacaccaaaa----atggtgggaccccttcctggaccctgcgt 229  Q
    ||||||| || |||||||||||||||  |||||| | ||||||| | ||| |||||||||||| ||     ||||||||||||||||||||| ||| |||    
T  52910250 ggttcaactcttggaaacagcctcttaggtaaaaaaacagggtaggactgtgtacaatacacctaatggttatggtgggaccccttcctggaacctccgt 52910349  T
Q  230 atgcgggagcttcagtgcaccaggttgccc 259  Q
    ||| |||| ||| ||||||||||| |||||    
T  52910350 atgtgggaactttagtgcaccaggctgccc 52910379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 4430080 - 4430008
Alignment:
Q  179 ggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccagg 253  Q
    |||||||||||||||||||||  |||||| ||||||| ||||| |||| |||||||||||||| ||||| |||||    
T  4430080 ggctgcgtacaatacaccaaa--tggtggaacccctttctggatcctgtgtatgcgggagctttagtgctccagg 4430008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 6358190 - 6358264
Alignment:
Q  171 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtg 246  Q
    |||||||| ||||||||||| ||||||||| ||||||||||||||||  |||||||||||||| ||| ||| ||||    
T  6358190 cagggtaaagctgcgtacaaaacaccaaaa-tggtgggaccccttcccagaccctgcgtatgcaggatctttagtg 6358264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 25290192 - 25290285
Alignment:
Q  131 cacgggttcaagtcctggaaaca--gcctcttgtgtaaaagacagggtaaggc-----tgcgtacaatacaccaaaaatggtgggaccccttcc 217  Q
    |||| ||||||||| ||||||||  ||||||||||||||| ||||||||||||     || ||||||||||||||||||| | |||||||||||    
T  25290192 cacgtgttcaagtcttggaaacacagcctcttgtgtaaaaaacagggtaaggcaaggttgtgtacaatacaccaaaaatgataggaccccttcc 25290285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 7074588 - 7074664
Alignment:
Q  174 ggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcacca 251  Q
    |||| |||||||||||||||||| ||||| |||||||| ||| || |||||||| ||| ||||||||| |||||||||    
T  7074588 ggtatggctgcgtacaatacacc-aaaattgtgggacctctttctagaccctgcatatccgggagctttagtgcacca 7074664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 43207528 - 43207640
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    |||| ||||| |||||||| |||||| ||| ||| |||||||||| | || ||||||||||| ||| |||||||||| |||||  ||||||  |||||||    
T  43207528 ggtttaagtcttggaaacaacctcttatgtgaaaaacagggtaagacggcatacaatacacc-aaattggtgggacctcttcccagaccctatgtatgcg 43207626  T
Q  235 ggagcttcagtgca 248  Q
     |||||| ||||||    
T  43207627 agagctttagtgca 43207640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 20169207 - 20169110
Alignment:
Q  142 gtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagctt 241  Q
    |||||| ||||| |||||||||||||| | | |||||| ||| ||||||||| ||||    |||||||| |||||| ||||||||| |||||||||||||    
T  20169207 gtcctgaaaacaccctcttgtgtaaaaaaaaaggtaagactgtgtacaataccccaatc--ggtgggactccttcccggaccctgcatatgcgggagctt 20169110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 21723728 - 21723811
Alignment:
Q  146 tggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatg 232  Q
    ||||||||||||||||| ||||| | |||||||||||| ||||||||||||  ||||||| | |||  |||| ||||||||||||||    
T  21723728 tggaaacagcctcttgtataaaa-atagggtaaggctgagtacaatacacc--aaatggtagaaccttttcccggaccctgcgtatg 21723811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 30555210 - 30555261
Alignment:
Q  199 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcacc 250  Q
    ||||||||||||||||||  |||||||||||||||| |||||| ||||||||    
T  30555210 aaatggtgggaccccttcacggaccctgcgtatgcgagagctttagtgcacc 30555261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 33594191 - 33594144
Alignment:
Q  202 tggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcac 249  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||||    
T  33594191 tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcac 33594144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 18335408 - 18335309
Alignment:
Q  140 aagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagc 239  Q
    ||||||||||||||| ||||||| |||||   ||||||| | ||||||||||||| |  ||||| |||||||| ||||| |||| || |||| |||||||    
T  18335408 aagtcctggaaacagtctcttgtttaaaaattagggtaaagttgcgtacaatacatc--aaatgatgggaccctttcctagaccatgtgtatacgggagc 18335311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 21910754 - 21910673
Alignment:
Q  154 gcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagc 239  Q
    ||||||| ||||||| | ||||||||| |||||||||||||||  ||||||||||||||||||| | ||||| ||| |||||||||    
T  21910754 gcctcttatgtaaaa-atagggtaaggttgcgtacaatacacc--aaatggtgggaccccttcccgaaccctacgt-tgcgggagc 21910673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 28894642 - 28894561
Alignment:
Q  176 taaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccc 259  Q
    ||||| ||||||||||||| ||||  ||||   |||||||||| |||||||| |||||| |||||| ||||||||||| |||||    
T  28894642 taaggttgcgtacaatacatcaaa--tggtaaaaccccttcctagaccctgcatatgcgagagctttagtgcaccaggctgccc 28894561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 34679336 - 34679280
Alignment:
Q  143 tcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 199  Q
    |||| |||||| |||||||||||||| |||||||||| |||||||| ||||| ||||    
T  34679336 tcctagaaacaacctcttgtgtaaaaaacagggtaagactgcgtactatacatcaaa 34679280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 16120819 - 16120874
Alignment:
Q  207 ggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| || |||||| ||||||||||||| | ||||||||| ||||||||    
T  16120819 ggaccccttcccggcccctgcatatgcgggagctttaatgcaccaggctgcccttt 16120874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 4249520 - 4249453
Alignment:
Q  183 gcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccag 252  Q
    |||||||||||||||||  |||||||| ||||||| | ||| || |||||||||||||| | ||||||||    
T  4249520 gcgtacaatacaccaaa--tggtgggatcccttcccgaaccttgtgtatgcgggagctttaatgcaccag 4249453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 4249844 - 4249777
Alignment:
Q  183 gcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccag 252  Q
    |||||||||||||||||  |||||||| ||||||| | ||| || |||||||||||||| | ||||||||    
T  4249844 gcgtacaatacaccaaa--tggtgggatcccttcccgaaccttgtgtatgcgggagctttaatgcaccag 4249777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 4250168 - 4250101
Alignment:
Q  183 gcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccag 252  Q
    |||||||||||||||||  |||||||| ||||||| | ||| || |||||||||||||| | ||||||||    
T  4250168 gcgtacaatacaccaaa--tggtgggatcccttcccgaaccttgtgtatgcgggagctttaatgcaccag 4250101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 14988043 - 14987989
Alignment:
Q  136 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaa 190  Q
    |||||||||||| ||||||  |||| ||||||| ||||| |||||||||||||||    
T  14988043 gttcaagtcctgaaaacagtatcttatgtaaaatacaggataaggctgcgtacaa 14987989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 2436022 - 2435985
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaa 168  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  2436022 cacgggttcaagtcctggaaacaacctcctgtgtaaaa 2435985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 44745900 - 44745854
Alignment:
Q  143 tcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaat 191  Q
    |||||||||||||||||||||||||  ||| ||||| ||||||||||||    
T  44745900 tcctggaaacagcctcttgtgtaaa--acaaggtaaagctgcgtacaat 44745854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 46859129 - 46859173
Alignment:
Q  165 aaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggac 210  Q
    |||| |||||||||| |||||||||||||||| |||||||||||||    
T  46859129 aaaaaacagggtaagactgcgtacaatacacc-aaaatggtgggac 46859173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 4251507 - 4251455
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgta 187  Q
    |||||||||||| |||||| ||| || ||||||| ||||||||||| ||||||    
T  4251507 ggttcaagtcctagaaacaaccttttatgtaaaaaacagggtaaggatgcgta 4251455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 20982838 - 20982773
Alignment:
Q  172 agggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagc 239  Q
    |||||||||||||  |||||||||| ||  |||||||| | ||||  |||||||||||||||||||||    
T  20982838 agggtaaggctgccaacaatacacctaa--tggtgggatctcttctcggaccctgcgtatgcgggagc 20982773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 37299573 - 37299633
Alignment:
Q  203 ggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||||||||| ||||| || | ||||| |||||| ||||||| ||| |||||||||    
T  37299573 ggtgggaccccttcccggaccatgtgcatgcgagagctttagtgcactaggctgcccttta 37299633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 41440666 - 41440618
Alignment:
Q  198 aaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtg 246  Q
    |||||||||| |||||||||| ||| ||| |||||||||||||| ||||    
T  41440666 aaaatggtggaaccccttcctagactctgtgtatgcgggagctttagtg 41440618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 58983 - 59115
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||  ||| |||||||    
T  58983 cacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgcgtacaatacaccaaaaatggtgggaccccttcccagactctgcgta 59082  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||||||| |||||| | ||||||||||||    
T  59083 tgcgggagctttagtgcatcgggttgcccttta 59115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 89; Significance: 7e-43; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 46837 - 46966
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||| ||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  46837 cacgggttcaagtgctggaaacaacctcttgtgtaaaaaatagggtaaggttgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgta 46934  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||| |||||||||||    
T  46935 tgcgggagctttagtgcaccgggttgcccttt 46966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 150 - 262
Target Start/End: Complemental strand, 24882 - 24772
Alignment:
Q  150 aacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcac 249  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||  |||||||||||||||| | ||||||||||||||||||||| ||||||     
T  24882 aacagcctcttgtgtaaaaaacagggtaaggctgcgtacaacacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcag 24785  T
Q  250 caggttgcccttt 262  Q
    | |||||||||||    
T  24784 ccggttgcccttt 24772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 138 - 262
Target Start/End: Original strand, 43672 - 43793
Alignment:
Q  138 tcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcct-ggaccctgcgtatgcggg 236  Q
    |||||| ||||||||||| ||||||||||||  || |||||||||||||||||||||||  ||||||||||||||||| || ||||||||| ||||||||    
T  43672 tcaagttctggaaacagcgtcttgtgtaaaa--caaggtaaggctgcgtacaatacacc--aaatggtgggacccctttctcggaccctgcatatgcggg 43767  T
Q  237 agcttcagtgcaccaggttgcccttt 262  Q
    ||||  |||||||   ||||||||||    
T  43768 agctctagtgcactgagttgcccttt 43793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 46796 - 46710
Alignment:
Q  172 agggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccc 259  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||  |||||||||||||||||||||| | |||| |||| |||||    
T  46796 agggtaaggatgcatacaatataccaaaa-tggtgggaccccttcccagaccctgcgtatgcgggagctttaatgcatcaggctgccc 46710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 30589 - 30712
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||  |||||||||||||||| ||||||||| ||||||    
T  30589 ggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtagggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcg 30684  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||  |||||||| |||||||||||    
T  30685 ggagctctagtgcaccgggttgcccttt 30712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 131 - 265
Target Start/End: Original strand, 11137 - 11267
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    |||||||||||||||||||||||||||||||||||||| | ||  ||||||||| ||||||||||||||  ||||||||| |||||| ||||||||| ||    
T  11137 cacgggttcaagtcctggaaacagcctcttgtgtaaaacaaag--taaggctgcttacaatacaccaaa--tggtgggacaccttcccggaccctgcata 11232  T
Q  231 tgcgggagcttcagtgcaccaggttgccctttact 265  Q
    ||||||||||  |||||||||||||||||||||||    
T  11233 tgcgggagctctagtgcaccaggttgccctttact 11267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 134 - 262
Target Start/End: Complemental strand, 48758 - 48634
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    ||||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| |||||    
T  48758 gggttcaagtggtggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgc 48663  T
Q  234 gggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||  |||||||| |||||||||||    
T  48662 gggagctctagtgcaccgggttgcccttt 48634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 13148 - 13024
Alignment:
Q  135 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcg 234  Q
    ||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||  ||||||||||||||||  |||||||||||||||    
T  13148 ggttcaagtcctggaaacagcctcttgcgtaaaa-acaaggtaaggctgcgtacaatacaccgaa--tggtgggaccccttcccagaccctgcgtatgcg 13052  T
Q  235 ggagcttcagtgcaccaggttgcccttt 262  Q
    || |||| |||||||| |||||||||||    
T  13051 ggggctttagtgcaccgggttgcccttt 13024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 131 - 260
Target Start/End: Complemental strand, 10177 - 10052
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||||||||||||||| |  |||||||||||||| ||||||||| ||    
T  10177 cacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagagtaagactgcgtacaatacaccaaata--gtgggaccccttcccggaccctgcata 10082  T
Q  231 tgcgggagcttcagtgcaccaggttgccct 260  Q
    ||| |||||| ||||||||| |||||||||    
T  10081 tgcaggagctccagtgcaccgggttgccct 10052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 131 - 260
Target Start/End: Complemental strand, 20505 - 20380
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||||||||||||||| |  |||||||||||||| ||||||||| ||    
T  20505 cacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagagtaagactgcgtacaatacaccaaata--gtgggaccccttcccggaccctgcata 20410  T
Q  231 tgcgggagcttcagtgcaccaggttgccct 260  Q
    ||| |||||| ||||||||| |||||||||    
T  20409 tgcaggagctccagtgcaccgggttgccct 20380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 72997 - 72867
Alignment:
Q  131 cacgggttcaagtcctggaaaca-gcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    |||||||||||||||| |||||| | ||||||||||||| ||| ||||||||||| ||||||||||||||  |||| | ||||||||| ||| |||||||    
T  72997 cacgggttcaagtcctagaaacaagtctcttgtgtaaaaaacacggtaaggctgcctacaatacaccaaa--tggtagtaccccttcccggaacctgcgt 72900  T
Q  230 atgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||| ||||||||||||||||||||    
T  72899 atgcgggagctttagtgcaccaggttgcccttt 72867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 10816 - 10945
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 230  Q
    ||||||||||||  ||| ||||| |||||||||||||| |||||||| |||||||| ||||||||||||  |||||||||||||||| ||||||||||||    
T  10816 cacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtagggctgcgtccaatacaccaaa--tggtgggaccccttcccggaccctgcgta 10913  T
Q  231 tgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||||||| |||||||  |||||| ||||    
T  10914 tgcgggagctttagtgcactgggttgctcttt 10945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 134 - 263
Target Start/End: Complemental strand, 1711 - 1586
Alignment:
Q  134 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 233  Q
    |||||||||||||| ||||| ||||||||||||||  |||| ||||||||| ||||||||||||||  || ||||||||||||| |||||| ||||||||    
T  1711 gggttcaagtcctgaaaacaacctcttgtgtaaaa--caggataaggctgcatacaatacaccaaa--tgatgggaccccttcccggacccggcgtatgc 1616  T
Q  234 gggagcttcagtgcaccaggttgcccttta 263  Q
    |||||||| |||||||||||||||| ||||    
T  1615 gggagctttagtgcaccaggttgcctttta 1586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 4163 - 4258
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaa-aaatggtgggaccccttcctggaccct 225  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||| |||||||    
T  4163 cacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataattggtgggaccccttcccggaccct 4258  T

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Target: scaffold0954 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 141 - 264
Target Start/End: Original strand, 3560 - 3681
Alignment:
Q  141 agtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagct 240  Q
    ||||||||||| |||||||||||||||| | | |||||||||||||| ||||||||   |||| ||||||||||||| | ||||||||||||||| ||||    
T  3560 agtcctggaaagagcctcttgtgtaaaatataaggtaaggctgcgtataatacacc--gaatgatgggaccccttcccgaaccctgcgtatgcggcagct 3657  T
Q  241 tcagtgcaccaggttgccctttac 264  Q
    | ||||||||  ||| ||||||||    
T  3658 ttagtgcaccgagtttccctttac 3681  T

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Target: scaffold0180 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 24220 - 24133
Alignment:
Q  173 gggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||||||||||  |||||||| | |||||||||    
T  24220 gggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccggattgcccttt 24133  T

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Target: scaffold0036 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 35147 - 35048
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgtaa-aagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgt 229  Q
    ||||||||||||||||| |||||| |||||||||   || |||||||||||||||||||||||||||  |||||||||||||| |||||||| | |||||    
T  35147 cacgggttcaagtcctgaaaacagtctcttgtgtgtgaaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccctttcctggatcttgcgt 35050  T

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Target: scaffold0167 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 23606 - 23713
Alignment:
Q  132 acgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtat 231  Q
    ||||||||||||| || ||||| |||||||||||||| ||||||| ||||||||||||||  | |  |||||||||||||||||||  |||| || ||||    
T  23606 acgggttcaagtcttgcaaacaacctcttgtgtaaaaaacagggtgaggctgcgtacaatgtagc--aaatggtgggaccccttcccagaccttgagtat 23703  T
Q  232 gcgggagctt 241  Q
    | ||||||||    
T  23704 gtgggagctt 23713  T

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Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 226535 - 226456
Alignment:
Q  131 cacgggttcaagtcctggaaacagcctcttgtgt-aaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggacc 211  Q
    ||||| |||||||||| ||||||||||||||| | |||| ||||||||||||||| ||||||||| |  |||||||||||||    
T  226535 cacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgcatacaatacatc--aaatggtgggacc 226456  T

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Target: scaffold0194 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 24696 - 24783
Alignment:
Q  173 gggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 262  Q
    ||||||| ||||||| ||||||||||| |  ||||  |||||| |  |||||||||||| |||||||||||||||||| | |||||||||    
T  24696 gggtaagactgcgtataatacaccaaata--gtggaccccctttccagaccctgcgtatacgggagcttcagtgcacctgattgcccttt 24783  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 58691 - 58629
Alignment:
Q  200 aatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttta 263  Q
    ||||||| |||||||||  |||||||| |||||||||||| || |||||||||| |||||||||    
T  58691 aatggtgagaccccttctcggaccctgtgtatgcgggagc-tctgtgcaccaggctgcccttta 58629  T

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