View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0880_low_2 (Length: 595)
Name: NF0880_low_2
Description: NF0880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0880_low_2 |
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[»] scaffold0015 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr4 (Bit Score: 541; Significance: 0; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 541; E-Value: 0
Query Start/End: Original strand, 21 - 589
Target Start/End: Original strand, 45164944 - 45165512
Alignment:
Q |
21 |
acatcatcactgctggaggaataaaagttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttca |
120 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
45164944 |
acatcatcactgctggaggaataaaagttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttca |
45165043 |
T |
 |
Q |
121 |
cggcttagcttctttctacagaaggttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataaatttaggtggtccgaa |
220 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
45165044 |
cggcttagcttctttctacagaaggttcattaaaaactttagctcgattgccaccccacttacagaatgcatcaaaggagataaatttaggtggtccgaa |
45165143 |
T |
 |
Q |
221 |
gaagctgataagagctttaaggaacttaagaagcgtttgactgaggcacctgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatg |
320 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
45165144 |
gaagctgataagagctttaaggaacttaagaagcgtttgactgaggcacccgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatg |
45165243 |
T |
 |
Q |
321 |
cttcgaacactggaattggagctgttctcatccaagagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacata |
420 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
45165244 |
cttcgaacactggaattggagctgttctcatccaagagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacata |
45165343 |
T |
 |
Q |
421 |
cgataaggagttttatgcagttgttcgtgcccttcaacattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaag |
520 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
45165344 |
cgataaggagttttatgcagttgttcgtgcccttcagcattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaag |
45165443 |
T |
 |
Q |
521 |
cacttgaactctcaacaaaagatcaggcgtagacacgctgcgtggagtgagtttctgcaatcttaccct |
589 |
Q |
|
|
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
45165444 |
cacttgaactctcaacaaaagatcagtagtagacacgctgcttggagtgagtttctgcaatcttaccct |
45165512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 21 - 531
Target Start/End: Original strand, 14024948 - 14025458
Alignment:
Q |
21 |
acatcatcactgctggaggaataaaagttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttca |
120 |
Q |
|
|
|||| |||||||||| ||| || |||||||||| |||||| |||| |||||||| || ||||| | ||||||||| | |||||| | || ||||| || |
|
|
T |
14024948 |
acataatcactgctgaaggtattcaagttgaccccagcaaggttgaggctatcaatagttggcctattccaaagtcatttcatgatgtgagaagtttcca |
14025047 |
T |
 |
Q |
121 |
cggcttagcttctttctacagaaggttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataaatttaggtggtccgaa |
220 |
Q |
|
|
|| |||||||| || || ||||||||||| || ||||||||||| ||||| ||||| |||| ||| ||||| || |||||||| || ||| |||| |
|
|
T |
14025048 |
tggattagcttcattttatagaaggttcatcaagaactttagctctgttgctaccccgcttacagattgcataaagggagataagttccaatggaccgag |
14025147 |
T |
 |
Q |
221 |
gaagctgataagagctttaaggaacttaagaagcgtttgactgaggcacctgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatg |
320 |
Q |
|
|
|||| | ||||| ||| | | || || | | ||||||||| |||| |||||||||||||| ||||||||||| || | |||||| |||||||| | |
|
|
T |
14025148 |
caagcacaaaagagttttgaccacctaaaacaacttttgactgaaacaccagtgctagcccttcccaactttgaccaggtgtccgaagtaagttgtgacg |
14025247 |
T |
 |
Q |
321 |
cttcgaacactggaattggagctgttctcatccaagagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacata |
420 |
Q |
|
|
|||| || | |||||||| || ||||| ||||| || |||||||||||||| |||||||| || |||| |||||| || || || ||||| ||||| |
|
|
T |
14025248 |
cttccaattcaggaattggtgcggttctatgtcaagaaggtcatcctatagccttctttagtgaaaagctcaacaatggtaaacttagatactcaacata |
14025347 |
T |
 |
Q |
421 |
cgataaggagttttatgcagttgttcgtgcccttcaacattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaag |
520 |
Q |
|
|
||||| || |||||||| |||| || ||| | ||||||||||| || |||||||||||||| | ||| ||||||| ||||||||||||||||||||| |
|
|
T |
14025348 |
tgataaagaattttatgccattgtccgagccttgcaacattggagtcattacttgttgaataaataatttattctttattctgatcatgaagccctcaag |
14025447 |
T |
 |
Q |
521 |
cacttgaactc |
531 |
Q |
|
|
|| |||||||| |
|
|
T |
14025448 |
catttgaactc |
14025458 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 538; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 538; E-Value: 0
Query Start/End: Original strand, 21 - 589
Target Start/End: Original strand, 37214073 - 37214642
Alignment:
Q |
21 |
acatcatcactgctggaggaataaaagttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttca |
120 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
37214073 |
acatcatcactgctggaggaataaaagttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttca |
37214172 |
T |
 |
Q |
121 |
cggcttagcttctttctacagaaggttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataaatttaggtggtccgaa |
220 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
37214173 |
cggcttagcttctttctacagaaggttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataaatttaggtggtccgaa |
37214272 |
T |
 |
Q |
221 |
gaagctgataagagctttaaggaacttaagaagcgtttgactgaggcacctgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatg |
320 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
37214273 |
gaagctgataagagctttaaggaacttaagaagcgtttgaccgaggcacccgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatg |
37214372 |
T |
 |
Q |
321 |
cttcgaacactggaattggagctgttctcatccaagagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacata |
420 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
37214373 |
cttcgaacactggaattggagctgttctcatccaagagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacata |
37214472 |
T |
 |
Q |
421 |
cgataaggagttttatgcagttgttcgtgcccttcaacattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaag |
520 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
37214473 |
cgataaggagttttatgcagttgttcgtgcccttcagcattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagtcctcaag |
37214572 |
T |
 |
Q |
521 |
cacttgaactctc-aacaaaagatcaggcgtagacacgctgcgtggagtgagtttctgcaatcttaccct |
589 |
Q |
|
|
||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
37214573 |
cacttgaactctcaaacaaaagatcagtcgtagacacgctgcttggagtgagtttctgcaatcttaccct |
37214642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 449; Significance: 0; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 21 - 585
Target Start/End: Complemental strand, 2407300 - 2406736
Alignment:
Q |
21 |
acatcatcactgctggaggaataaaagttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttca |
120 |
Q |
|
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
T |
2407300 |
acatcatcactgctagaggaataaaagttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgacataaggagttttca |
2407201 |
T |
 |
Q |
121 |
cggcttagcttctttctacagaaggttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataaatttaggtggtccgaa |
220 |
Q |
|
|
|||||||||||||||||||| |||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||| ||| |
|
|
T |
2407200 |
cggcttagcttctttctacaaaaggttcattaaaaactttatctcagtttccaccccacttacagaatgcatcaaaggagataaatttaggtggtctgaa |
2407101 |
T |
 |
Q |
221 |
gaagctgataagagctttaaggaacttaagaagcgtttgactgaggcacctgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatg |
320 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
2407100 |
gaagctgataagagctttaaggaacttaagaagcgtttgactgaggcacccgtgctagcccttcctaactttgaccaagtattcgaagttagttgcgatg |
2407001 |
T |
 |
Q |
321 |
cttcgaacactggaattggagctgttctcatccaagagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacata |
420 |
Q |
|
|
| ||||||||| ||||||||||||||| | ||| ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
2407000 |
atccgaacactgaaattggagctgttctgagccacaagggacatcatatagcctttttcagtgagaaactcaacaatgggaagctcaggtactctacata |
2406901 |
T |
 |
Q |
421 |
cgataaggagttttatgcagttgttcgtgcccttcaacattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaag |
520 |
Q |
|
|
|| ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
2406900 |
tgacaagcagttttatgcagttgttcgtgctcttcagcattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaag |
2406801 |
T |
 |
Q |
521 |
cacttgaactctcaacaaaagatcaggcgtagacacgctgcgtggagtgagtttctgcaatctta |
585 |
Q |
|
|
|||||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||| |
|
|
T |
2406800 |
cacttgaactctcaacaaaagatcagtcgcagacaagctgcttggagtgagtttctgcaatctta |
2406736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 21 - 574
Target Start/End: Complemental strand, 2792738 - 2792185
Alignment:
Q |
21 |
acatcatcactgctggaggaataaaagttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttca |
120 |
Q |
|
|
|||| |||||||||| ||| || ||||||||| |||||| |||| |||||||| || ||||| | ||||||||| | |||||| | || ||||| | |
|
|
T |
2792738 |
acataatcactgctgaaggtattcgagttgaccccagcaaggttgaggctatcaatagttggcctattccaaagtcaattcatgatgtgagaagtttcta |
2792639 |
T |
 |
Q |
121 |
cggcttagcttctttctacagaaggttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataaatttaggtggtccgaa |
220 |
Q |
|
|
|| |||||||| || || ||||||||||| || ||||||||||| ||||| |||| |||| ||| ||||| || |||||||| || ||| |||| |
|
|
T |
2792638 |
tggattagcttcattttatagaaggttcatcaagaactttagctctgttgctgccccgcttacagattgcataaagggagataagttccaatggaccgag |
2792539 |
T |
 |
Q |
221 |
gaagctgataagagctttaaggaacttaagaagcgtttgactgaggcacctgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatg |
320 |
Q |
|
|
|||| | ||||| ||| | | || || | | ||||||||| |||| |||||||||||||| ||||||||||| || |||||||| |||||||| | |
|
|
T |
2792538 |
caagcacaaaagagttttgaccacctaaaacaacttttgactgaaacaccagtgctagcccttcccaactttgaccaggtgttcgaagtaagttgtgacg |
2792439 |
T |
 |
Q |
321 |
cttcgaacactggaattggagctgttctcatccaagagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacata |
420 |
Q |
|
|
|||| || | |||||||| || ||||| ||||| || |||||||||||||| |||||||| || |||| |||||| || || || ||||| ||||| |
|
|
T |
2792438 |
cttccaattcaggaattggtgcggttctatgtcaagaaggtcatcctatagccttctttagtgaaaagctcaacaatggtaaacttagatactcaacata |
2792339 |
T |
 |
Q |
421 |
cgataaggagttttatgcagttgttcgtgcccttcaacattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaag |
520 |
Q |
|
|
||||| || |||||||| |||| || ||| | ||||||||||| || |||||||||||||| || ||| ||||||| ||||||||||||||||||||| |
|
|
T |
2792338 |
tgataaagaattttatgccattgtccgagccttgcaacattggagtcattacttgttgaataaagaatttattctttattctgatcatgaagccctcaag |
2792239 |
T |
 |
Q |
521 |
cacttgaactctcaacaaaagatcaggcgtagacacgctgcgtggagtgagttt |
574 |
Q |
|
|
|| ||||| |||||||||||||||| || || || || || |||||||||||| |
|
|
T |
2792238 |
catttgaattctcaacaaaagatcaatcgcaggcatgccgcttggagtgagttt |
2792185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 256 - 574
Target Start/End: Complemental strand, 14473539 - 14473221
Alignment:
Q |
256 |
tttgactgaggcacctgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatgcttcgaacactggaattggagctgttctcatccaa |
355 |
Q |
|
|
||||||||| |||| |||||||||||||| ||||||||||| || |||||||| |||||||| ||||| || | |||||||| || ||||| ||| |
|
|
T |
14473539 |
tttgactgaaacaccagtgctagcccttcccaactttgaccaggtgttcgaagtaagttgtgacgcttccaattcaggaattggtgcggttctatgtcaa |
14473440 |
T |
 |
Q |
356 |
gagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacatacgataaggagttttatgcagttgttcgtgcccttc |
455 |
Q |
|
|
|| || |||||||||||||| |||||||| || |||| |||||| || || || ||||| ||||| ||||| || |||||||| |||| || ||| | | |
|
|
T |
14473439 |
gaaggtcatcctatagccttctttagtgaaaagctcaacaatggtaaacttagatactcaacatatgataaagaattttatgccattgtccgagccttgc |
14473340 |
T |
 |
Q |
456 |
aacattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaagcacttgaactctcaacaaaagatcaggcgtagaca |
555 |
Q |
|
|
|||||||||| || |||||||||||||| || ||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| || || || |
|
|
T |
14473339 |
aacattggagtcattacttgttgaataaagaatttattctttattctgatcatgaagccctcaagcatttgaattctcaacaaaagatcaatcgcaggca |
14473240 |
T |
 |
Q |
556 |
cgctgcgtggagtgagttt |
574 |
Q |
|
|
|| || |||||||||||| |
|
|
T |
14473239 |
tgccgcttggagtgagttt |
14473221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 21 - 204
Target Start/End: Complemental strand, 14473774 - 14473591
Alignment:
Q |
21 |
acatcatcactgctggaggaataaaagttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttca |
120 |
Q |
|
|
|||| |||||||||| ||| || ||||||||| |||||| |||| || ||||| || ||||| | ||| ||||| | ||||| |||| | |||||| |
|
|
T |
14473774 |
acataatcactgctgaaggtattcgagttgaccccagcaaggttgaggccatcaatagttggcctattcccaagtcaattcatgacgtaagaaattttca |
14473675 |
T |
 |
Q |
121 |
cggcttagcttctttctacagaaggttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataa |
204 |
Q |
|
|
|| |||||||| || || ||||||||||| || ||||||||||| ||||| |||| |||| ||| ||||| || |||||||| |
|
|
T |
14473674 |
tggattagcttcattttatagaaggttcatcaagaactttagctctgttgctgccccgcttacagattgcataaagggagataa |
14473591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 125 - 552
Target Start/End: Original strand, 8533607 - 8534022
Alignment:
Q |
125 |
ttagcttctttctacagaaggttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataaatttaggtggtccgaagaag |
224 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||| ||||| |||| |||| | ||||||||||| |||| ||| | || ||||| ||||||| |
|
|
T |
8533607 |
ttagcttctttctacaaaaggttcattaaaaactttagctcgattgccgcccctcttacataatgcatcaaaagagagaaaatcagatggtcagaagaag |
8533706 |
T |
 |
Q |
225 |
ctgataagagctttaaggaacttaagaagcgtttgactgaggcacctgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatgcttc |
324 |
Q |
|
|
| |||||| |||| ||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||||||||| |||||||||| |
|
|
T |
8533707 |
ccaataagaactttgaggaactaaagaagcgtttgacggaggc-cccgtgctagcccttcctaactttgaccaagtatttgaagttagtggtgatgcttc |
8533805 |
T |
 |
Q |
325 |
gaacactggaattggagctgttctcatccaagagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacatacgat |
424 |
Q |
|
|
|||| ||||||| ||||| |||||| |||||||||| |||| | ||||||||||| |||||| ||||||| |||||||||| | || |
|
|
T |
8533806 |
aaacaatggaattagagctattctcaggtaagagggaca-----------ttttcattgagaaactcaacaatggaaagctcaagtactctacacatgaa |
8533894 |
T |
 |
Q |
425 |
aaggagttttatgcagttgttcgtgcccttcaacattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaagcact |
524 |
Q |
|
|
||||| ||||| | |||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
T |
8533895 |
aaggatttttacgtttttgttcgtgctcttcatcattggagccactacttgtcgaataaggtgtttgttctttactctgatcatgaatccctcaagcact |
8533994 |
T |
 |
Q |
525 |
tgaactctcaacaaaagatcaggcgtag |
552 |
Q |
|
|
||||| |||||||||||||||| ||||| |
|
|
T |
8533995 |
tgaaccctcaacaaaagatcagtcgtag |
8534022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 21 - 574
Target Start/End: Complemental strand, 5380244 - 5379691
Alignment:
Q |
21 |
acatcatcactgctggaggaataaaagttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttca |
120 |
Q |
|
|
|||| |||||||||| ||| || ||||||||| |||||| |||| |||||||| || ||||| | ||||||||| | |||||| | || ||||| || |
|
|
T |
5380244 |
acataatcactgctgaaggtattcgagttgaccccagcaaggttgaggctatcaatagttggcctattccaaagtcaattcatgatgtgagaagtttcca |
5380145 |
T |
 |
Q |
121 |
cggcttagcttctttctacagaaggttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataaatttaggtggtccgaa |
220 |
Q |
|
|
|| |||||||| || || ||||||||||| || ||||||||||| ||||| ||||||||| ||| ||||| ||||| ||||| || ||| |||| |
|
|
T |
5380144 |
tggattagcttcattttatagaaggttcatcaagaactttagctctgttgctgccccacttacagattgcataaaaggggataagttccaatggaccgag |
5380045 |
T |
 |
Q |
221 |
gaagctgataagagctttaaggaacttaagaagcgtttgactgaggcacctgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatg |
320 |
Q |
|
|
|||| | ||||| ||| | | || || | | |||||| || |||| |||||||||||||| ||||||||||| || |||||||| |||||||| | |
|
|
T |
5380044 |
caagcataaaagagttttgaccacctcaaacaacttttgaccgaaacaccagtgctagcccttcccaactttgaccaggtgttcgaagtaagttgtgacg |
5379945 |
T |
 |
Q |
321 |
cttcgaacactggaattggagctgttctcatccaagagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacata |
420 |
Q |
|
|
|||| || | |||||||| || ||||| ||||| || |||||||||||||| |||||||| || |||| |||||| || || || ||||| ||||| |
|
|
T |
5379944 |
cttccaattcaggaattggtgcggttctatgtcaagaaggtcatcctatagccttctttagtgaaaagctcaacaatggtaaacttagatactcaacata |
5379845 |
T |
 |
Q |
421 |
cgataaggagttttatgcagttgttcgtgcccttcaacattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaag |
520 |
Q |
|
|
||||| || |||||||| |||| || ||| | ||||||||||| || |||||||||||||| || ||| ||||||| ||||||||||||||||||||| |
|
|
T |
5379844 |
tgataaagaattttatgccattgtccgagccttgcaacattggagtcattacttgttgaataaagaatttattctttattctgatcatgaagccctcaag |
5379745 |
T |
 |
Q |
521 |
cacttgaactctcaacaaaagatcaggcgtagacacgctgcgtggagtgagttt |
574 |
Q |
|
|
|| ||||| |||||||||||||||| || ||||| || || |||||||||||| |
|
|
T |
5379744 |
catttgaattctcaacaaaagatcaatcgcagacatgccgcctggagtgagttt |
5379691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 287 - 574
Target Start/End: Original strand, 4101854 - 4102141
Alignment:
Q |
287 |
aactttgaccaagtattcgaagttagttgtgatgcttcgaacactggaattggagctgttctcatccaagagggacatcctatagccttttttagtgaga |
386 |
Q |
|
|
||||||||||| || |||||||| || ||||| ||||| || | |||||||| || ||||| ||||| || |||||||||||||| |||||||| | |
|
|
T |
4101854 |
aactttgaccaggtgttcgaagtaagctgtgacgcttctaattcaggaattggcgcggttctatgtcaagaaggtcatcctatagccttctttagtgaaa |
4101953 |
T |
 |
Q |
387 |
aactcagcaatgggaagctcaggtactctacatacgataaggagttttatgcagttgttcgtgcccttcaacattggagccactacttgttgaataagga |
486 |
Q |
|
|
| |||| |||||| || || || ||||| ||||| ||||| || |||||||| |||| || ||| | |||||||||| || |||||||||||||| || |
|
|
T |
4101954 |
agctcaacaatggtaaacttagatactcaacatatgataaagatttttatgccattgtccgagccttgtaacattggagtcattacttgttgaataaaga |
4102053 |
T |
 |
Q |
487 |
gtttgttctttactctgatcatgaagccctcaagcacttgaactctcaacaaaagatcaggcgtagacacgctgcgtggagtgagttt |
574 |
Q |
|
|
||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| ||||| || ||||| |||||||||||| |
|
|
T |
4102054 |
atttattctttattctgatcatgaagccctcaagcatttgaattctcaacaaaagatcaatcgtaggcatgctgcttggagtgagttt |
4102141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 8533467 - 8533564
Alignment:
Q |
21 |
acatcatcactgctggaggaataaaagttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagtttt |
118 |
Q |
|
|
|||||||||||| || ||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |
|
|
T |
8533467 |
acatcatcactgttgaaggcataaaagttgacccaagcaagattgaagctatcaacaattggtcaactccaaagtatgttcatgatataaggagtttt |
8533564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 13719984 - 13719828
Alignment:
Q |
48 |
ttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttcacggcttagcttctttctacagaaggtt |
147 |
Q |
|
|
||||||| |||||| |||| |||||||| || ||||| | ||| ||||| | |||||| | || | |||| | || |||||||| || || |||||||| |
|
|
T |
13719984 |
ttgaccctagcaaggttgaggctatcaatagttggcctattcctaagtcaattcatgatgttagaattttttatggattagcttcattttatagaaggtt |
13719885 |
T |
 |
Q |
148 |
cattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataa |
204 |
Q |
|
|
||| || ||||||||||| ||||| |||| |||| ||| ||||| || |||||||| |
|
|
T |
13719884 |
catcaagaactttagctctgttgctgccccgcttacagattgcataaagggagataa |
13719828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 4101692 - 4101771
Alignment:
Q |
125 |
ttagcttctttctacagaaggttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataa |
204 |
Q |
|
|
|||||||| || || ||||||||||| || |||||||| || ||||| ||||||||| ||| ||||| ||||||||||| |
|
|
T |
4101692 |
ttagcttcattttatagaaggttcatcaagaactttagttctgttgctgccccacttacagattgcataaaaggagataa |
4101771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 118; Significance: 6e-60; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 21 - 574
Target Start/End: Complemental strand, 26426 - 25873
Alignment:
Q |
21 |
acatcatcactgctggaggaataaaagttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttca |
120 |
Q |
|
|
|||| |||||||||| ||| || ||||||||| |||||| |||| |||||||| || ||||| | ||||||||| | |||||| | || ||||| || |
|
|
T |
26426 |
acataatcactgctgaaggtattcgagttgaccccagcaaggttgaggctatcaatagttggcctattccaaagtcaattcatgatgtgagaagtttcca |
26327 |
T |
 |
Q |
121 |
cggcttagcttctttctacagaaggttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataaatttaggtggtccgaa |
220 |
Q |
|
|
|| |||||||| || || ||||||||||| || ||||||||||| ||||| |||| |||| ||| ||||| || |||||||| || ||| |||| |
|
|
T |
26326 |
tggattagcttcattttatagaaggttcatcaagaactttagctctgttgctgccccgcttacagattgcataaagggagataagttccaatggaccgag |
26227 |
T |
 |
Q |
221 |
gaagctgataagagctttaaggaacttaagaagcgtttgactgaggcacctgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatg |
320 |
Q |
|
|
|||| | ||||| ||| | | || || | | ||||||||| |||| |||||||||||||| ||||||||||| || |||||||| |||||||| | |
|
|
T |
26226 |
caagcacaaaagagttttgaccacctaaaacaacttttgactgaaacaccagtgctagcccttcccaactttgaccaggtgttcgaagtaagttgtgacg |
26127 |
T |
 |
Q |
321 |
cttcgaacactggaattggagctgttctcatccaagagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacata |
420 |
Q |
|
|
|||| || | |||||||| || ||||| ||||| || |||||||||||||| |||||||| || |||| |||||| || || || ||||| ||||| |
|
|
T |
26126 |
cttccaattcaggaattggtgcggttctatgtcaagaaggtcatcctatagccttctttagtgaaaagctcaacaatggtaaacttagatactcaacata |
26027 |
T |
 |
Q |
421 |
cgataaggagttttatgcagttgttcgtgcccttcaacattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaag |
520 |
Q |
|
|
||||| || |||||||| |||| || ||| | ||||||||||| || |||||||||||||| || ||| ||||||| ||||||||||||||||||||| |
|
|
T |
26026 |
tgataaagaattttatgccattgtccgagccttgcaacattggagtcattacttgttgaataaagaatttattctttattctgatcatgaagccctcaag |
25927 |
T |
 |
Q |
521 |
cacttgaactctcaacaaaagatcaggcgtagacacgctgcgtggagtgagttt |
574 |
Q |
|
|
|| ||||| |||||||||||||||| || || || || || |||||||||||| |
|
|
T |
25926 |
catttgaattctcaacaaaagatcaatcgcaggcatgccgcttggagtgagttt |
25873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 118; Significance: 6e-60; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 21 - 574
Target Start/End: Original strand, 89663 - 90216
Alignment:
Q |
21 |
acatcatcactgctggaggaataaaagttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttca |
120 |
Q |
|
|
|||| |||||||||| ||| || ||||||||| |||||| |||| |||||||| || ||||| | ||||||||| | |||||| | || ||||| || |
|
|
T |
89663 |
acataatcactgctgaaggtattcgagttgaccccagcaaggttgaggctatcaatagttggcctattccaaagtcaattcatgatgtgagaagtttcca |
89762 |
T |
 |
Q |
121 |
cggcttagcttctttctacagaaggttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataaatttaggtggtccgaa |
220 |
Q |
|
|
|| |||||||| || || ||||||||||| || ||||||||||| ||||| |||| |||| ||| ||||| || |||||||| || ||| |||| |
|
|
T |
89763 |
tggattagcttcattttatagaaggttcatcaagaactttagctctgttgctgccccgcttacagattgcataaagggagataagttccaatggaccgag |
89862 |
T |
 |
Q |
221 |
gaagctgataagagctttaaggaacttaagaagcgtttgactgaggcacctgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatg |
320 |
Q |
|
|
|||| | ||||| ||| | | || || | | ||||||||| |||| |||||||||||||| ||||||||||| || |||||||| |||||||| | |
|
|
T |
89863 |
caagcacaaaagagttttgaccacctaaaacaacttttgactgaaacaccagtgctagcccttcccaactttgaccaggtgttcgaagtaagttgtgacg |
89962 |
T |
 |
Q |
321 |
cttcgaacactggaattggagctgttctcatccaagagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacata |
420 |
Q |
|
|
|||| || | |||||||| || ||||| ||||| || |||||||||||||| |||||||| || |||| |||||| || || || ||||| ||||| |
|
|
T |
89963 |
cttccaattcaggaattggtgcggttctatgtcaagaaggtcatcctatagccttctttagtgaaaagctcaacaatggtaaacttagatactcaacata |
90062 |
T |
 |
Q |
421 |
cgataaggagttttatgcagttgttcgtgcccttcaacattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaag |
520 |
Q |
|
|
||||| || |||||||| |||| || ||| | ||||||||||| || |||||||||||||| || ||| ||||||| ||||||||||||||||||||| |
|
|
T |
90063 |
tgataaagaattttatgccattgtccgagccttgcaacattggagtcattacttgttgaataaagaatttattctttattctgatcatgaagccctcaag |
90162 |
T |
 |
Q |
521 |
cacttgaactctcaacaaaagatcaggcgtagacacgctgcgtggagtgagttt |
574 |
Q |
|
|
|| ||||| |||||||||||||||| || || || || || |||||||||||| |
|
|
T |
90163 |
catttgaattctcaacaaaagatcaatcgcaggcatgccgcttggagtgagttt |
90216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 114; Significance: 2e-57; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 21 - 574
Target Start/End: Original strand, 11714517 - 11715070
Alignment:
Q |
21 |
acatcatcactgctggaggaataaaagttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttca |
120 |
Q |
|
|
|||| |||||||||| ||| || ||||||||| |||||| |||| |||||||| || ||||| | ||||||||| | |||||| | || ||||| || |
|
|
T |
11714517 |
acataatcactgctgaaggtattcgagttgaccccagcaaggttgaggctatcaatagttggcctattccaaagtcaattcatgatgtgagaagtttcca |
11714616 |
T |
 |
Q |
121 |
cggcttagcttctttctacagaaggttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataaatttaggtggtccgaa |
220 |
Q |
|
|
|| |||||||| || || ||||||||||| || ||||||||||| ||||| |||| |||| ||| ||||| || |||||||| || ||| |||| |
|
|
T |
11714617 |
tggattagcttcattttatagaaggttcatcaagaactttagctctgttgctgccccgcttacagattgcataaagggagataagttccaatggaccgag |
11714716 |
T |
 |
Q |
221 |
gaagctgataagagctttaaggaacttaagaagcgtttgactgaggcacctgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatg |
320 |
Q |
|
|
|||| | ||||| ||| | | || || | | ||||||||| |||| |||||||||||||| ||||||||||| || |||||||| |||||||| | |
|
|
T |
11714717 |
caagcacaaaagagttttgaccacctaaaacaacttttgactgaaacaccagtgctagcccttcccaactttgaccaggtgttcgaagtaagttgtgacg |
11714816 |
T |
 |
Q |
321 |
cttcgaacactggaattggagctgttctcatccaagagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacata |
420 |
Q |
|
|
|||| || | |||||||| || ||||| ||||| || |||||||||||||| |||||||| || |||| |||||| || || || ||||| ||||| |
|
|
T |
11714817 |
cttccaattcaggaattggtgcggttctatgtcaagaaggtcatcctatagccttctttagtgaaaagctcaacaatggtaaacttagatactcaacata |
11714916 |
T |
 |
Q |
421 |
cgataaggagttttatgcagttgttcgtgcccttcaacattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaag |
520 |
Q |
|
|
||||| || |||||||| |||| || ||| | ||||||||||| || |||||||||||||| || ||| ||||||| |||||||||||||||||||| |
|
|
T |
11714917 |
tgataaagaattttatgccattgtccgagccttgcaacattggagtcattacttgttgaataaagaatttattctttattctgatcatgaagccctcaat |
11715016 |
T |
 |
Q |
521 |
cacttgaactctcaacaaaagatcaggcgtagacacgctgcgtggagtgagttt |
574 |
Q |
|
|
|| ||||| |||||||||||||||| || || || || || |||||||||||| |
|
|
T |
11715017 |
catttgaattctcaacaaaagatcaatcgcaggcatgccgcttggagtgagttt |
11715070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 46 - 574
Target Start/End: Original strand, 11710180 - 11710708
Alignment:
Q |
46 |
agttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttcacggcttagcttctttctacagaagg |
145 |
Q |
|
|
||||||||| |||||| |||| |||||||| || ||||| | ||||||||| | |||||| | || ||||| || || |||||||| || || |||||| |
|
|
T |
11710180 |
agttgaccccagcaaggttgaggctatcaataggtggcctattccaaagtcaattcatgatgtgagaagtttccatggattagcttcattttatagaagg |
11710279 |
T |
 |
Q |
146 |
ttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataaatttaggtggtccgaagaagctgataagagctttaaggaac |
245 |
Q |
|
|
||||| || ||||||||||| ||||| |||| |||| ||| ||||| || |||||||| || ||| |||| || | | ||||| ||| | | | |
|
|
T |
11710280 |
ttcatcaagaactttagctctgttgctgccccgcttacagattgcataaagggagataagttccaatggaccgagcaatcacaaaagagttttgaccacc |
11710379 |
T |
 |
Q |
246 |
ttaagaagcgtttgactgaggcacctgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatgcttcgaacactggaattggagctgt |
345 |
Q |
|
|
| || | | ||||||||| ||||||||||||||||||| ||||||||||| || |||||||| |||||||| ||||| || | |||||||| || || |
|
|
T |
11710380 |
taaaacaacttttgactgaaacacctgtgctagcccttcccaactttgaccaggtgttcgaagtaagttgtgacgcttccaattcaggaattggtgcggt |
11710479 |
T |
 |
Q |
346 |
tctcatccaagagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacatacgataaggagttttatgcagttgtt |
445 |
Q |
|
|
||| ||||| || |||||||||||||| |||||||| || |||| |||||| || || || || || ||||| ||||| || |||||||| |||| |
|
|
T |
11710480 |
tctatgtcaagaaggtcatcctatagccttctttagtgaaaagctcaacaatggtaaacttagatattcaacatatgataaagaattttatgccattgtc |
11710579 |
T |
 |
Q |
446 |
cgtgcccttcaacattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaagcacttgaactctcaacaaaagatca |
545 |
Q |
|
|
|| ||| | ||||||||||| || |||||||||||||| || ||| ||||||| ||||||||||||||||| || || ||||| |||||||||||||||| |
|
|
T |
11710580 |
cgagccttgcaacattggagtcattacttgttgaataaagaatttattctttattctgatcatgaagcccttaaacatttgaattctcaacaaaagatca |
11710679 |
T |
 |
Q |
546 |
ggcgtagacacgctgcgtggagtgagttt |
574 |
Q |
|
|
|| || || || || |||||||||||| |
|
|
T |
11710680 |
atcgcaggcatgccgcttggagtgagttt |
11710708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 275 - 571
Target Start/End: Original strand, 13165137 - 13165433
Alignment:
Q |
275 |
ctagcccttcctaactttgaccaagtattcgaagttagttgtgatgcttcgaacactggaattggagctgttctcatccaagagggacatcctatagcct |
374 |
Q |
|
|
||||||||||| ||| ||||||| || |||||||| |||||||| ||||| | |||||||| || ||||| ||||| || ||||||||| ||| |
|
|
T |
13165137 |
ctagcccttcccaaccttgaccaggtgttcgaagtaagttgtgacgcttcccattaaggaattggtgcggttctatgtcaagaaggtcatcctatatcct |
13165236 |
T |
 |
Q |
375 |
tttttagtgagaaactcagcaatgggaagctcaggtactctacatacgataaggagttttatgcagttgttcgtgcccttcaacattggagccactactt |
474 |
Q |
|
|
| |||||||| || |||| |||||| || || || ||||| ||||| ||||| | |||||||| |||| || | | | ||||||||||| || ||| | |
|
|
T |
13165237 |
tctttagtgaaaagctcaacaatggtaaacttagatactcaacatatgataaaaaattttatgccattgtccgaggcttgcaacattggagtcattacat |
13165336 |
T |
 |
Q |
475 |
gttgaataaggagtttgttctttactctgatcatgaagccctcaagcacttgaactctcaacaaaagatcaggcgtagacacgctgcgtggagtgag |
571 |
Q |
|
|
||||||||| || ||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| || ||||| || || ||||||||| |
|
|
T |
13165337 |
gttgaataaagaatttattctttattctgatcatgaagccctcaagcatttgaattctcaacaaaagatcaatcgcagacatgccgcttggagtgag |
13165433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 256 - 574
Target Start/End: Complemental strand, 16774436 - 16774118
Alignment:
Q |
256 |
tttgactgaggcacctgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatgcttcgaacactggaattggagctgttctcatccaa |
355 |
Q |
|
|
||||||||| |||| |||||| ||||||| ||||||||||| || |||||||| |||||||| ||||| || | |||||||| || ||||| ||| |
|
|
T |
16774436 |
tttgactgaaacaccagtgctaacccttcccaactttgaccaggtgttcgaagtaagttgtgacgcttccaattcaggaattggtgcggttctatgtcaa |
16774337 |
T |
 |
Q |
356 |
gagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacatacgataaggagttttatgcagttgttcgtgcccttc |
455 |
Q |
|
|
|| || |||||||||||||| |||||||| || |||| |||||| || || || ||||| ||||| ||||| || |||||||| |||| || ||| | | |
|
|
T |
16774336 |
gaaggtcatcctatagccttctttagtgaaaagctcaacaatggtaaacttagatactcaacatatgataaagaattttatgccattgtccgagccttgc |
16774237 |
T |
 |
Q |
456 |
aacattggagccactacttgttgaataaggagtttgttctttactctgatcatgaagccctcaagcacttgaactctcaacaaaagatcaggcgtagaca |
555 |
Q |
|
|
|||||||||| || |||||||||||||| || ||| ||||||| ||||||||||| ||||||||||| ||||| |||||||||||||||| || || || |
|
|
T |
16774236 |
aacattggagtcattacttgttgaataaagaatttattctttattctgatcatgaggccctcaagcatttgaattctcaacaaaagatcaatcgcaggca |
16774137 |
T |
 |
Q |
556 |
cgctgcgtggagtgagttt |
574 |
Q |
|
|
|| || |||||||||||| |
|
|
T |
16774136 |
tgccgcttggagtgagttt |
16774118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 46 - 545
Target Start/End: Original strand, 32706191 - 32706691
Alignment:
Q |
46 |
agttgacccaagcaagattgaagctatcaacagctggccaactccaaagtctgtccatgatataaggagttttcacggcttagcttctttctacagaagg |
145 |
Q |
|
|
||||||||| | |||| |||| |||||||| || ||||| | ||||||||| | |||||| | || ||||| || || |||||||| || || |||||| |
|
|
T |
32706191 |
agttgaccccaacaaggttgaggctatcaatagttggcctattccaaagtcaattcatgatgtgagaagtttccatggattagcttcattttatagaagg |
32706290 |
T |
 |
Q |
146 |
ttcattaaaaactttagctcggttgccaccccacttatagaatgcatcaaaggagataaatttaggtggtccgaagaagctgataagagctttaaggaac |
245 |
Q |
|
|
||||| || ||||||||||| ||||| |||| |||| ||| ||||| || |||||||| || ||| ||| |||| | ||||| ||| | | | |
|
|
T |
32706291 |
ttcatcaagaactttagctctgttgctgccccgcttacagattgcataaagggagataagttacaatggatcgagcaagcacaaaagagttttgaccacc |
32706390 |
T |
 |
Q |
246 |
ttaagaagcgtttgactgaggcacctgtgctagcccttcctaactttgaccaagtattcgaagttagttgtgatgcttcgaacactggaattggagctgt |
345 |
Q |
|
|
| || | | ||| ||||| |||| |||||||||||||||||||||||||| || |||||||| |||||||| ||||| || | |||||||| || || |
|
|
T |
32706391 |
taaaacaacttttaactgaaacaccagtgctagcccttcctaactttgaccaggtgttcgaagtaagttgtgacgcttccaattcaggaattggtgcggt |
32706490 |
T |
 |
Q |
346 |
tctcatccaagagggacatcctatagccttttttagtgagaaactcagcaatgggaagctcaggtactctacatacgataaggagttttatgcagttgtt |
445 |
Q |
|
|
| | ||||| || ||||||||| |||| |||||||| || |||| |||||| || || || |||| | ||| ||||| || |||||||| |||| |
|
|
T |
32706491 |
tttatgtcaagaaggtcatcctatatccttctttagtgaaaagctcaacaatggtaaacttagatacttaatatatgataaagaattttatgccattgtc |
32706590 |
T |
 |
Q |
446 |
cgtgcccttcaacattggagccactacttgttgaataaggagtttg-ttctttactctgatcatgaagccctcaagcacttgaactctcaacaaaagatc |
544 |
Q |
|
|
|| ||| | ||||||||||| || |||||||||||||| || ||| ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
T |
32706591 |
cgagccttgcaacattggagtcattacttgttgaataaagaattttattctttattctgatcatgaagccctcaagcatttgaattctcaacaaaagatc |
32706690 |
T |
 |
Q |
545 |
a |
545 |
Q |
|
|
| |
|
|
T |
32706691 |
a |
32706691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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