View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0880_low_20 (Length: 290)

Name: NF0880_low_20
Description: NF0880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0880_low_20
NF0880_low_20
[»] chr8 (33 HSPs)
chr8 (89-290)||(22009125-22009326)
chr8 (89-289)||(21967922-21968122)
chr8 (89-289)||(21980762-21980962)
chr8 (89-289)||(21985745-21985945)
chr8 (89-290)||(44494152-44494345)
chr8 (140-290)||(11774296-11774446)
chr8 (124-289)||(22000713-22000873)
chr8 (140-290)||(8414905-8415055)
chr8 (89-290)||(34950043-34950236)
chr8 (89-287)||(11252019-11252204)
chr8 (153-286)||(21328579-21328712)
chr8 (153-290)||(42560810-42560947)
chr8 (139-219)||(21386158-21386238)
chr8 (140-219)||(23427826-23427905)
chr8 (140-219)||(23913265-23913344)
chr8 (140-219)||(44385833-44385912)
chr8 (140-219)||(14399092-14399171)
chr8 (89-160)||(42561025-42561096)
chr8 (140-202)||(27942702-27942764)
chr8 (140-199)||(363268-363327)
chr8 (140-202)||(18864121-18864183)
chr8 (140-219)||(21409900-21409980)
chr8 (140-219)||(21804392-21804472)
chr8 (142-202)||(30941581-30941641)
chr8 (140-219)||(21974183-21974262)
chr8 (140-219)||(43250202-43250281)
chr8 (140-202)||(21829477-21829539)
chr8 (140-183)||(8729645-8729688)
chr8 (140-219)||(21978293-21978372)
chr8 (89-128)||(22003050-22003089)
chr8 (140-202)||(22110601-22110663)
chr8 (211-263)||(44475805-44475857)
chr8 (211-263)||(44479067-44479119)
[»] chr7 (55 HSPs)
chr7 (90-290)||(16185474-16185674)
chr7 (140-290)||(41283645-41283795)
chr7 (89-290)||(11394807-11395000)
chr7 (153-290)||(15213061-15213198)
chr7 (140-219)||(13891630-13891709)
chr7 (140-219)||(20486742-20486821)
chr7 (140-219)||(7520215-7520294)
chr7 (140-219)||(10607320-10607399)
chr7 (140-219)||(11660282-11660361)
chr7 (140-219)||(25928371-25928450)
chr7 (140-219)||(39268313-39268392)
chr7 (140-202)||(146500-146562)
chr7 (140-202)||(838150-838212)
chr7 (140-202)||(1203330-1203392)
chr7 (153-219)||(13892026-13892092)
chr7 (140-202)||(14420787-14420849)
chr7 (140-202)||(16005004-16005066)
chr7 (140-202)||(18606338-18606400)
chr7 (140-202)||(18871297-18871359)
chr7 (140-219)||(9752507-9752586)
chr7 (140-219)||(18424235-18424314)
chr7 (140-202)||(1860038-1860100)
chr7 (140-202)||(10897913-10897975)
chr7 (140-202)||(13919429-13919491)
chr7 (140-202)||(16109992-16110054)
chr7 (140-219)||(26291156-26291236)
chr7 (140-219)||(39721195-39721275)
chr7 (140-219)||(2833481-2833560)
chr7 (140-219)||(16582421-16582500)
chr7 (140-202)||(834062-834124)
chr7 (140-202)||(1199242-1199304)
chr7 (140-202)||(45171517-45171579)
chr7 (162-219)||(18301373-18301430)
chr7 (140-219)||(15083225-15083305)
chr7 (140-219)||(31725-31804)
chr7 (140-219)||(12706122-12706201)
chr7 (140-219)||(12713540-12713619)
chr7 (140-219)||(12722198-12722277)
chr7 (89-160)||(15212912-15212983)
chr7 (140-219)||(16908509-16908588)
chr7 (140-219)||(18281958-18282037)
chr7 (140-202)||(2531349-2531410)
chr7 (140-202)||(18277994-18278056)
chr7 (211-263)||(14565152-14565204)
chr7 (140-219)||(12717287-12717366)
chr7 (140-183)||(15166250-15166293)
chr7 (140-202)||(72388-72450)
chr7 (140-202)||(76497-76559)
chr7 (141-183)||(11302308-11302350)
chr7 (211-268)||(146606-146663)
chr7 (211-268)||(10897812-10897869)
chr7 (211-268)||(18871403-18871460)
chr7 (211-268)||(29795269-29795326)
chr7 (211-268)||(29799088-29799145)
chr7 (211-263)||(11660388-11660440)
[»] chr1 (24 HSPs)
chr1 (90-290)||(11809878-11810078)
chr1 (89-289)||(11944951-11945143)
chr1 (89-289)||(43630922-43631114)
chr1 (140-263)||(29533887-29534011)
chr1 (186-289)||(636500-636596)
chr1 (89-214)||(20032180-20032297)
chr1 (139-219)||(21406252-21406332)
chr1 (140-219)||(22132098-22132177)
chr1 (140-219)||(41801278-41801357)
chr1 (140-202)||(16370925-16370987)
chr1 (140-219)||(41389664-41389743)
chr1 (140-202)||(32649067-32649129)
chr1 (140-219)||(20230138-20230218)
chr1 (140-219)||(33796033-33796112)
chr1 (155-219)||(39245170-39245234)
chr1 (155-219)||(39248725-39248789)
chr1 (140-219)||(1009262-1009341)
chr1 (140-219)||(1926795-1926874)
chr1 (140-219)||(16376815-16376894)
chr1 (140-219)||(20925809-20925888)
chr1 (155-219)||(52634283-52634347)
chr1 (255-290)||(20032150-20032185)
chr1 (141-183)||(20439188-20439230)
chr1 (211-263)||(28311671-28311723)
[»] chr5 (34 HSPs)
chr5 (89-289)||(19075846-19076038)
chr5 (140-290)||(33473860-33474010)
chr5 (89-289)||(31253140-31253332)
chr5 (153-290)||(36459561-36459698)
chr5 (103-214)||(43243764-43243867)
chr5 (140-219)||(15238117-15238196)
chr5 (140-219)||(22120591-22120670)
chr5 (140-202)||(28372098-28372160)
chr5 (140-202)||(37600025-37600087)
chr5 (140-202)||(19510462-19510524)
chr5 (140-202)||(22339012-22339074)
chr5 (140-202)||(38146435-38146497)
chr5 (143-219)||(10751820-10751896)
chr5 (140-219)||(20912252-20912331)
chr5 (139-202)||(22749160-22749223)
chr5 (89-160)||(36459412-36459483)
chr5 (140-202)||(22335482-22335544)
chr5 (140-202)||(23113419-23113481)
chr5 (140-202)||(41878668-41878730)
chr5 (140-219)||(18354797-18354876)
chr5 (140-219)||(24768562-24768641)
chr5 (140-202)||(11219555-11219617)
chr5 (140-219)||(19474172-19474251)
chr5 (140-219)||(20294514-20294593)
chr5 (140-202)||(11224141-11224203)
chr5 (140-202)||(11226157-11226219)
chr5 (140-202)||(11227963-11228025)
chr5 (140-202)||(11229953-11230015)
chr5 (140-219)||(22108449-22108527)
chr5 (255-290)||(43243734-43243769)
chr5 (211-268)||(22335654-22335711)
chr5 (211-268)||(23113318-23113375)
chr5 (211-268)||(28371931-28371988)
chr5 (211-268)||(41878567-41878624)
[»] chr3 (73 HSPs)
chr3 (89-289)||(45220892-45221084)
chr3 (140-290)||(41134-41284)
chr3 (89-284)||(2249151-2249338)
chr3 (89-290)||(5841123-5841316)
chr3 (140-290)||(16325970-16326120)
chr3 (153-290)||(16840132-16840269)
chr3 (153-290)||(11912440-11912577)
chr3 (140-263)||(10834896-10835020)
chr3 (139-219)||(4590160-4590240)
chr3 (139-219)||(8491732-8491812)
chr3 (140-219)||(12853363-12853442)
chr3 (140-219)||(14670026-14670105)
chr3 (140-219)||(16795503-16795582)
chr3 (139-217)||(17318511-17318589)
chr3 (140-219)||(13435818-13435897)
chr3 (140-202)||(3801970-3802032)
chr3 (140-202)||(12304174-12304236)
chr3 (103-214)||(14648275-14648378)
chr3 (140-202)||(14764812-14764874)
chr3 (140-202)||(18899453-18899515)
chr3 (140-202)||(20249866-20249928)
chr3 (140-202)||(54519597-54519659)
chr3 (140-201)||(14681550-14681611)
chr3 (139-202)||(23173296-23173359)
chr3 (141-215)||(8928871-8928945)
chr3 (140-202)||(9532258-9532320)
chr3 (140-202)||(14664425-14664487)
chr3 (140-202)||(14667589-14667651)
chr3 (140-202)||(15463878-15463940)
chr3 (140-202)||(23372560-23372622)
chr3 (140-202)||(51299533-51299595)
chr3 (140-201)||(19774198-19774259)
chr3 (139-219)||(14068062-14068142)
chr3 (140-219)||(18933355-18933435)
chr3 (140-219)||(30064384-30064464)
chr3 (140-219)||(5219847-5219926)
chr3 (211-290)||(8928761-8928840)
chr3 (89-160)||(11912291-11912362)
chr3 (89-160)||(51608665-51608736)
chr3 (140-202)||(11301682-11301744)
chr3 (108-166)||(16840341-16840399)
chr3 (140-202)||(29545955-29546017)
chr3 (140-202)||(38312874-38312936)
chr3 (142-219)||(16751901-16751978)
chr3 (143-219)||(11853709-11853785)
chr3 (211-290)||(13435924-13436003)
chr3 (140-219)||(7108238-7108317)
chr3 (140-219)||(7112173-7112252)
chr3 (140-219)||(11068613-11068692)
chr3 (140-219)||(14497947-14498026)
chr3 (140-219)||(22320129-22320208)
chr3 (140-219)||(22335184-22335263)
chr3 (140-219)||(55021376-55021455)
chr3 (211-268)||(3802076-3802133)
chr3 (211-268)||(9532364-9532421)
chr3 (140-202)||(4108805-4108868)
chr3 (140-202)||(4112654-4112717)
chr3 (140-219)||(11167093-11167172)
chr3 (255-290)||(14648245-14648280)
chr3 (140-219)||(15616177-15616256)
chr3 (140-199)||(28948461-28948520)
chr3 (140-202)||(12337257-12337318)
chr3 (140-202)||(15963497-15963559)
chr3 (140-202)||(15967421-15967483)
chr3 (140-202)||(15971345-15971407)
chr3 (93-143)||(16840452-16840502)
chr3 (211-268)||(12304280-12304337)
chr3 (211-268)||(14764711-14764768)
chr3 (211-268)||(18899538-18899595)
chr3 (211-268)||(23372459-23372516)
chr3 (211-268)||(29545833-29545890)
chr3 (211-268)||(51299639-51299696)
chr3 (211-268)||(54519703-54519760)
[»] chr6 (43 HSPs)
chr6 (140-290)||(23955369-23955519)
chr6 (89-290)||(28707816-28708009)
chr6 (91-287)||(9622845-9623032)
chr6 (153-290)||(25737905-25738042)
chr6 (153-290)||(34297701-34297838)
chr6 (139-219)||(18918580-18918660)
chr6 (140-202)||(12941221-12941283)
chr6 (103-214)||(14594666-14594769)
chr6 (140-202)||(27222832-27222894)
chr6 (140-219)||(2076286-2076365)
chr6 (140-202)||(4475795-4475857)
chr6 (153-219)||(23537994-23538060)
chr6 (153-202)||(1254172-1254221)
chr6 (103-209)||(7429398-7429496)
chr6 (139-200)||(18953502-18953563)
chr6 (142-199)||(28290914-28290971)
chr6 (140-219)||(23400677-23400757)
chr6 (89-160)||(1254019-1254090)
chr6 (140-219)||(31479462-31479541)
chr6 (140-202)||(22075407-22075469)
chr6 (89-160)||(34297916-34297987)
chr6 (140-202)||(19869187-19869249)
chr6 (140-202)||(23393641-23393703)
chr6 (140-202)||(23413549-23413611)
chr6 (140-202)||(27416544-27416606)
chr6 (155-219)||(16622850-16622914)
chr6 (140-219)||(8242412-8242491)
chr6 (140-219)||(11565401-11565480)
chr6 (140-219)||(11716940-11717019)
chr6 (140-219)||(12620333-12620412)
chr6 (140-219)||(27555540-27555618)
chr6 (140-202)||(14470881-14470943)
chr6 (108-166)||(25737775-25737833)
chr6 (211-268)||(4475902-4475959)
chr6 (211-268)||(12941327-12941384)
chr6 (153-202)||(22947680-22947729)
chr6 (153-202)||(22951636-22951685)
chr6 (153-202)||(23870124-23870173)
chr6 (153-202)||(23874080-23874129)
chr6 (140-219)||(22861755-22861834)
chr6 (140-219)||(23988303-23988382)
chr6 (140-202)||(16758715-16758777)
chr6 (258-290)||(7429499-7429531)
[»] chr2 (26 HSPs)
chr2 (140-289)||(37379036-37379185)
chr2 (140-202)||(9240674-9240736)
chr2 (140-216)||(21074510-21074586)
chr2 (140-219)||(9783994-9784073)
chr2 (140-202)||(19663574-19663636)
chr2 (140-202)||(20260257-20260319)
chr2 (140-202)||(6481784-6481846)
chr2 (140-202)||(6485251-6485313)
chr2 (140-193)||(10686272-10686325)
chr2 (140-202)||(41532459-41532521)
chr2 (140-219)||(24630047-24630126)
chr2 (140-219)||(24645151-24645230)
chr2 (140-219)||(24647927-24648006)
chr2 (140-219)||(27380993-27381072)
chr2 (140-219)||(27384963-27385042)
chr2 (140-219)||(27600371-27600450)
chr2 (140-219)||(30346657-30346736)
chr2 (140-202)||(10103313-10103375)
chr2 (140-202)||(12902623-12902685)
chr2 (140-202)||(24647094-24647156)
chr2 (140-219)||(31343917-31343996)
chr2 (211-268)||(6262129-6262186)
chr2 (211-268)||(19663407-19663464)
chr2 (211-268)||(20260363-20260420)
chr2 (211-263)||(6481890-6481942)
chr2 (211-263)||(6485357-6485409)
[»] chr4 (39 HSPs)
chr4 (89-289)||(37839121-37839313)
chr4 (140-290)||(28384851-28385001)
chr4 (89-289)||(42597850-42598042)
chr4 (139-219)||(631747-631827)
chr4 (139-219)||(10711824-10711904)
chr4 (139-219)||(10925594-10925674)
chr4 (140-219)||(22634926-22635005)
chr4 (140-219)||(24048384-24048463)
chr4 (139-219)||(27532751-27532831)
chr4 (140-219)||(12422943-12423022)
chr4 (140-219)||(13818320-13818399)
chr4 (140-219)||(17052445-17052524)
chr4 (140-202)||(15533219-15533281)
chr4 (140-202)||(30145783-30145845)
chr4 (140-202)||(36036952-36037014)
chr4 (154-219)||(13813832-13813897)
chr4 (140-219)||(15223546-15223625)
chr4 (140-202)||(18211604-18211666)
chr4 (140-219)||(20158447-20158526)
chr4 (140-219)||(20163898-20163977)
chr4 (140-219)||(23996966-23997044)
chr4 (159-202)||(49549099-49549142)
chr4 (143-219)||(20161123-20161199)
chr4 (140-219)||(4562773-4562852)
chr4 (140-219)||(5758455-5758534)
chr4 (140-219)||(9555069-9555148)
chr4 (140-219)||(12486271-12486350)
chr4 (140-219)||(14758991-14759070)
chr4 (140-219)||(14955759-14955838)
chr4 (140-219)||(17807054-17807133)
chr4 (140-219)||(33740836-33740915)
chr4 (153-219)||(25688455-25688521)
chr4 (139-229)||(38106945-38107036)
chr4 (211-268)||(15533325-15533382)
chr4 (211-268)||(18211731-18211788)
chr4 (211-268)||(36037058-36037115)
chr4 (211-268)||(49548998-49549055)
chr4 (139-183)||(14047317-14047361)
chr4 (211-263)||(24048305-24048357)
[»] scaffold0016 (1 HSPs)
scaffold0016 (89-290)||(173154-173338)
[»] scaffold0815 (1 HSPs)
scaffold0815 (123-289)||(1-159)
[»] scaffold0679 (1 HSPs)
scaffold0679 (169-290)||(3194-3315)
[»] scaffold0001 (5 HSPs)
scaffold0001 (199-289)||(175425-175515)
scaffold0001 (89-166)||(163705-163782)
scaffold0001 (153-198)||(163588-163633)
scaffold0001 (211-290)||(153706-153785)
scaffold0001 (224-290)||(163528-163594)
[»] scaffold0599 (2 HSPs)
scaffold0599 (153-290)||(4134-4271)
scaffold0599 (89-160)||(3985-4056)
[»] scaffold0380 (1 HSPs)
scaffold0380 (139-219)||(3973-4053)
[»] scaffold0139 (1 HSPs)
scaffold0139 (139-219)||(23937-24017)
[»] scaffold0029 (1 HSPs)
scaffold0029 (139-219)||(62839-62919)
[»] scaffold0013 (1 HSPs)
scaffold0013 (139-219)||(74331-74411)
[»] scaffold0575 (1 HSPs)
scaffold0575 (140-219)||(6960-7039)
[»] scaffold0031 (1 HSPs)
scaffold0031 (140-219)||(37202-37281)
[»] scaffold0124 (1 HSPs)
scaffold0124 (140-217)||(25569-25646)
[»] scaffold0109 (1 HSPs)
scaffold0109 (139-219)||(37197-37277)
[»] scaffold0098 (2 HSPs)
scaffold0098 (89-214)||(34011-34128)
scaffold0098 (255-290)||(34123-34158)
[»] scaffold0080 (4 HSPs)
scaffold0080 (140-219)||(28472-28551)
scaffold0080 (140-219)||(33937-34016)
scaffold0080 (213-290)||(28580-28657)
scaffold0080 (213-290)||(34045-34122)
[»] scaffold2015 (1 HSPs)
scaffold2015 (103-214)||(444-547)
[»] scaffold1427 (1 HSPs)
scaffold1427 (140-202)||(200-262)
[»] scaffold0337 (2 HSPs)
scaffold0337 (140-202)||(10838-10900)
scaffold0337 (211-268)||(10737-10794)
[»] scaffold0026 (1 HSPs)
scaffold0026 (140-202)||(109601-109663)
[»] scaffold0012 (2 HSPs)
scaffold0012 (140-202)||(224159-224221)
scaffold0012 (211-268)||(224058-224115)
[»] scaffold0142 (1 HSPs)
scaffold0142 (140-219)||(8739-8818)
[»] scaffold0842 (1 HSPs)
scaffold0842 (140-202)||(5242-5304)
[»] scaffold0544 (2 HSPs)
scaffold0544 (140-202)||(3533-3595)
scaffold0544 (211-268)||(3432-3489)
[»] scaffold0200 (1 HSPs)
scaffold0200 (140-200)||(10767-10827)
[»] scaffold0410 (1 HSPs)
scaffold0410 (140-219)||(14844-14923)
[»] scaffold0327 (1 HSPs)
scaffold0327 (140-199)||(18823-18882)
[»] scaffold1852 (1 HSPs)
scaffold1852 (140-202)||(837-899)
[»] scaffold0293 (1 HSPs)
scaffold0293 (162-219)||(21339-21396)
[»] scaffold0486 (1 HSPs)
scaffold0486 (140-219)||(8577-8656)
[»] scaffold0166 (1 HSPs)
scaffold0166 (140-219)||(11059-11138)
[»] scaffold0141 (1 HSPs)
scaffold0141 (140-202)||(15591-15653)
[»] scaffold0003 (1 HSPs)
scaffold0003 (140-202)||(70755-70817)
[»] scaffold0015 (1 HSPs)
scaffold0015 (253-289)||(208655-208691)
[»] scaffold0372 (1 HSPs)
scaffold0372 (140-219)||(6320-6399)
[»] scaffold0349 (1 HSPs)
scaffold0349 (140-219)||(11051-11130)
[»] scaffold0157 (1 HSPs)
scaffold0157 (140-219)||(34127-34206)
[»] scaffold0028 (1 HSPs)
scaffold0028 (140-219)||(60325-60404)
[»] scaffold0525 (1 HSPs)
scaffold0525 (140-202)||(5547-5609)
[»] scaffold0299 (1 HSPs)
scaffold0299 (140-202)||(5826-5887)
[»] scaffold0023 (1 HSPs)
scaffold0023 (140-202)||(11777-11839)
[»] scaffold0061 (1 HSPs)
scaffold0061 (140-219)||(68555-68634)


Alignment Details
Target: chr8 (Bit Score: 178; Significance: 5e-96; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 22009326 - 22009125
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22009326 gacatcatcatatacacttaataataattcttcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 22009227  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  22009226 atttaacaactcataggtaacatcatgtaatatcataacaacctcacattcaaccctataaaagatcatcataacctcgtcatactcatcaacataaaca 22009127  T
Q  289 ac 290  Q
    ||    
T  22009126 ac 22009125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 21968122 - 21967922
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21968122 gacatcatcatatacactcaataataattcttcttaacatccccttagtgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtac 21968023  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  21968022 atttaacaactcataggtaacatcatgtaatatcataacaacctcacattcaaccctataaaagatcatcataacctcgtcatactcatcaacataaaca 21967923  T
Q  289 a 289  Q
    |    
T  21967922 a 21967922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 21980962 - 21980762
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21980962 gacatcatcatatacactcaataataattcttcttaacatccccttagtgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtac 21980863  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  21980862 atttaacaactcataggtaacatcatgtaatatcataacaacctcacattcaaccctataaaaaatcatcataacctcgtcatactcatcaacataaaca 21980763  T
Q  289 a 289  Q
    |    
T  21980762 a 21980762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 21985945 - 21985745
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21985945 gacatcatcatatacactcaataataattcttcttaacatccccttagtgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtac 21985846  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  21985845 atttaacaactcataggtaacatcatgtaatatcataacaacctcacattcaaccctataaaatatcatcataacctcgtcatactcatcaacataaaca 21985746  T
Q  289 a 289  Q
    |    
T  21985745 a 21985745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 44494345 - 44494152
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||        |||||||| |||||||||||    
T  44494345 gacatcatcatatacactcaataataattattcttaacatccccttagtgctcatgaatagaagacaactta--------acataaccatcatcaagtac 44494254  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    ||||||||| |||| |||||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  44494253 atttaacaattcataggtaacatcatgtaatatcataacaacctcacattcaacactatagaagatcatcataacctcgtcatactcatcaacataaaca 44494154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 140 - 290
Target Start/End: Original strand, 11774296 - 11774446
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattc 239  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  11774296 tcatgaataaaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaaccccacattc 11774395  T
Q  240 aacaccataaaagatcatcataacctcgtcatactcatcaacataaacaac 290  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11774396 aacatcataaaagatcatcataacctcgtcatactcatcaacataaacaac 11774446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 124 - 289
Target Start/End: Complemental strand, 22000873 - 22000713
Alignment:
Q  124 aacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatca 223  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  22000873 aacatccccttagtgctcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacatcatgtaatatca 22000774  T
Q  224 taacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaacaa 289  Q
    |||||| |||||||      | |||||||||||||||||||| |||||||||||||||||||||||    
T  22000773 taacaacctcacat-----cctataaaagatcatcataacctagtcatactcatcaacataaacaa 22000713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 140 - 290
Target Start/End: Complemental strand, 8415055 - 8414905
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattc 239  Q
    ||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||     
T  8415055 tcatgaataaaagacaacttatcaacttaaaataaccctaatcaagtacatttaacaactcataggtaacctcatgtaatatcataacaaccccacattt 8414956  T
Q  240 aacaccataaaagatcatcataacctcgtcatactcatcaacataaacaac 290  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8414955 aacatcataaaagatcatcataacctcgtcatactcatcaacataaacaac 8414905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 89 - 290
Target Start/End: Original strand, 34950043 - 34950236
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| | || | ||      ||  ||| | ||  ||||||||||||    
T  34950043 gacatcatcatatacactcaataataattcttcttaacatcccattagtgctcatgaaaaaaaaaaaa------aa--taaaaaaaaactcatcaagtac 34950134  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||||| |||||| ||||||||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  34950135 atttaacaactcataggtaacatcatgtaatatcagaacaacctcacattcaacactatataagatcatcataacctcgtcatactcatcaacataaaca 34950234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 89 - 287
Target Start/End: Complemental strand, 11252204 - 11252019
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaa-tagaacacaacttatcaacttaacataaccctcatcaagta 187  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| ||||||||        |||||||| ||||||||||    
T  11252204 gacatcatcatatacactcaataataattcttcttaacatccccttagtgctcatgaaatagaagacaactta--------acataacc-tcatcaagta 11252114  T
Q  188 catttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaac 287  Q
    ||||||||||||||| |||||| ||     |||||||||| | |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  11252113 catttaacaactcataggtaacatc-----atatcataaccacctcacattcaacactatagaagatcatcataacctcgtcatactcatcaacataaac 11252019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 153 - 286
Target Start/End: Original strand, 21328579 - 21328712
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaag 252  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||| |||||||||| |||||||||||||| |||||      
T  21328579 acaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaacatcataacaacctcacattcaacactataaaca 21328678  T
Q  253 atcatcataacctcgtcatactcatcaacataaa 286  Q
    ||||||||||| |||||||| |||||||||||||    
T  21328679 atcatcataacatcgtcataatcatcaacataaa 21328712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 153 - 290
Target Start/End: Complemental strand, 42560947 - 42560810
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaag 252  Q
    ||||||| ||||||||||||||||  ||||| |||||||||||||||||| | |||| |||||||| |||| ||||  ||| |||||||||| |||||      
T  42560947 acaacttgtcaacttaacataaccaccatcacgtacatttaacaactcatagataacatcatgtaacatcaaaacagcctctcattcaacactataaaca 42560848  T
Q  253 atcatcataacctcgtcatactcatcaacataaacaac 290  Q
    ||||||||| | |||||||| |||||||||||||||||    
T  42560847 atcatcatagcatcgtcataatcatcaacataaacaac 42560810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 21386158 - 21386238
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | | |||| |||||||||    
T  21386158 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 21386238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 23427826 - 23427905
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| |||| |||||||||||||||||||| | |||| |||||||||    
T  23427826 tcatgaataaaagacaacttatcaacttaacataaccatcattaagtacatttaacaactcatagataacatcatgtaat 23427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 23913265 - 23913344
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||| || | |||| |||||||||    
T  23913265 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaacttatagataacatcatgtaat 23913344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 44385912 - 44385833
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||| ||||||||| | ||||||||||||||||||||||||| | |||| |||||||||    
T  44385912 tcatgaataaaagacaacttatcaagttaacataatcatcatcaagtacatttaacaactcatagataacatcatgtaat 44385833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 14399171 - 14399092
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  14399171 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 14399092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 42561096 - 42561025
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaactta 160  Q
    |||||||||| || |||  |||||||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  42561096 gacatcatcaaatccacccaataataattcttcttaacatccccttagtactcatgaatagaagacaactta 42561025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 27942764 - 27942702
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||||||||| |||||| ||||||| |||||||||||||||||||||||||    
T  27942764 tcatgaataaaagacaacttattaacttatcataaccatcatcaagtacatttaacaactcat 27942702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 363268 - 363327
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaact 199  Q
    ||||||||| || ||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  363268 tcatgaataaaagacaacttatcatcttaacataaccatcaacaagtacatttaacaact 363327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 18864183 - 18864121
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  18864183 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 18864121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 21409900 - 21409980
Alignment:
Q  140 tcatgaatagaacacaacttatcaactt-aacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || ||||||||||||||| ||||||||| |||||||||||| |||||||||||| | || | |||||||||    
T  21409900 tcattaataaaagacaacttatcaactttaacataaccatcatcaagtacacttaacaactcatagatatcatcatgtaat 21409980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 21804392 - 21804472
Alignment:
Q  140 tcatgaatagaacacaacttatcaactt-aacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || ||||||||||||||| ||||||||| |||||||||||| |||||||||||| | || | |||||||||    
T  21804392 tcattaataaaagacaacttatcaactttaacataaccatcatcaagtacacttaacaactcatagatatcatcatgtaat 21804472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 30941641 - 30941581
Alignment:
Q  142 atgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||| || |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  30941641 atgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 30941581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 21974262 - 21974183
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  21974262 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 21974183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 43250202 - 43250281
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  43250202 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 43250281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 21829539 - 21829477
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  21829539 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 21829477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 8729688 - 8729645
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatca 183  Q
    ||||||||| || |||||||||||||||||||||||| ||||||    
T  8729688 tcatgaataaaagacaacttatcaacttaacataaccatcatca 8729645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 21978372 - 21978293
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || ||||||||||||  |||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  21978372 tcattaataaaagacaacttatcaatataacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 21978293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 22003089 - 22003050
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacat 128  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  22003089 gacatcatcatatacactcaataataattcttcttaacat 22003050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 22110601 - 22110663
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||| |||| || |||||||||||| |||||||||   |||||||||||| ||||||||||||    
T  22110601 tcattaataaaagacaacttatcaatttaacataaaaatcatcaagtacacttaacaactcat 22110663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 44475805 - 44475857
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataac 263  Q
    |||||||| |||||||||| |||| |||||||||||||||   ||||||||||    
T  44475805 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataac 44475857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 44479067 - 44479119
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataac 263  Q
    |||||||| |||||||||| |||| |||||||||||||||   ||||||||||    
T  44479067 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataac 44479119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 4e-81; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 90 - 290
Target Start/End: Original strand, 16185474 - 16185674
Alignment:
Q  90 acatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtaca 189  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||    
T  16185474 acatcatcatatacactcaatattaattcttcttaacatccccttagtgctcatgaatagaagacgacttatcaacttaacatgaccctcatcaagtaca 16185573  T
Q  190 tttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaacaa 289  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||    
T  16185574 tttaacaactcataggtaacatcatgtaatatcataacaacctcacattcaacactatagaagatcatcataacctcgtcatactcatcaacataaccaa 16185673  T
Q  290 c 290  Q
    |    
T  16185674 c 16185674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 140 - 290
Target Start/End: Original strand, 41283645 - 41283795
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattc 239  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||    
T  41283645 tcatgaataaaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaatatcataacaaccccacattc 41283744  T
Q  240 aacaccataaaagatcatcataacctcgtcatactcatcaacataaacaac 290  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41283745 aacatcataaaagatcatcataacctcgtcatactcatcaacataaacaac 41283795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 11395000 - 11394807
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||| ||||| | |||||||||| | |||||||| | ||||||||||||||||||||         ||||||||||||||||||||||||||||    
T  11395000 gacatcatcagatacattcaataataattctccttaacattctcttagtgctcatgaatagaag--------tcaacttaacataaccctcatcaagtac 11394909  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  11394908 atttaacaactcataggtaacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaaca 11394809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 153 - 290
Target Start/End: Original strand, 15213061 - 15213198
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaag 252  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||| |||| ||||  ||| |||||||||| |||||      
T  15213061 acaacttatcaacttaacataaccatcatcaagtacatttaacaactcatggataacatcatgtaacatcaaaacagcctctcattcaacactataaaca 15213160  T
Q  253 atcatcataacctcgtcatactcatcaacataaacaac 290  Q
    ||||||||||| |||| ||| |||||||||||||||||    
T  15213161 atcatcataacatcgtgataatcatcaacataaacaac 15213198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 13891630 - 13891709
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  13891630 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 13891709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 20486742 - 20486821
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  20486742 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 20486821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 7520294 - 7520215
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | ||||||||||||||||||||||||| | |||| |||||||||    
T  7520294 tcatgaataaaagacaacttatcaacttaacataatcatcatcaagtacatttaacaactcatagataacatcatgtaat 7520215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 10607399 - 10607320
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||||| || || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  10607399 tcatgactaaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 10607320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 11660282 - 11660361
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  11660282 tcatgaataaaagacaacttaccaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 11660361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 25928450 - 25928371
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| |||| |||||||||||||||||||| | |||| |||||||||    
T  25928450 tcatgaataaaaaacaacttatcaacttaacataaccatcataaagtacatttaacaactcatagataacatcatgtaat 25928371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 39268392 - 39268313
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  39268392 tcatgaataaaaggcaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 39268313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 146500 - 146562
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  146500 tcatgagtagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 146562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 838212 - 838150
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  838212 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 838150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 1203392 - 1203330
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1203392 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 1203330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 13892026 - 13892092
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  13892026 acaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 13892092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 14420787 - 14420849
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14420787 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 14420849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 16005004 - 16005066
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16005004 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 16005066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 18606338 - 18606400
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18606338 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 18606400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 18871297 - 18871359
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18871297 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 18871359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 9752586 - 9752507
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| ||  ||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||| |||||||||    
T  9752586 tcatgaataaaaggcaacttatcaacttaacataaccatcaccaagtacatttaacaactcatagataacatcatgtaat 9752507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 18424235 - 18424314
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | ||||||||||||||||||||||||| | |||  |||||||||    
T  18424235 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataatatcatgtaat 18424314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 1860100 - 1860038
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||||||||||||||||    
T  1860100 tcatgaataaaagacaacttatcaacttaacataaacgtcatcaagtacatttaacaactcat 1860038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 10897975 - 10897913
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  10897975 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacgactcat 10897913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 13919491 - 13919429
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||||||||||||||||    
T  13919491 tcatgaataaaagacaacttatcaacttaacataaacgtcatcaagtacatttaacaactcat 13919429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 16110054 - 16109992
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || | |||||||||||||||||||||| |||||||||||||||||||||||||    
T  16110054 tcatgaataaaagataacttatcaacttaacataaccatcatcaagtacatttaacaactcat 16109992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 26291156 - 26291236
Alignment:
Q  140 tcatgaatagaacacaacttatcaactt-aacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || ||||||||||||||| ||||||||| |||||||||||| |||||||||||| | |||| |||||||||    
T  26291156 tcatgaataaaagacaacttatcaactttaacataaccatcatcaagtacacttaacaactcatagataacatcatgtaat 26291236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 39721195 - 39721275
Alignment:
Q  140 tcatgaatagaacacaacttatcaactt-aacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||| | || | |||||||||    
T  39721195 tcatgaataaaagacaacttatcaactttaacataaccatcatcaagtacatttaacaactcatagatatcatcatgtaat 39721275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 2833560 - 2833481
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  2833560 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 2833481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 16582421 - 16582500
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||| | || |||||||||||||||| ||||||| |||||||||||||||||||||||||   |||| |||||||||    
T  16582421 tcatgaaaaaaagacaacttatcaacttatcataaccatcatcaagtacatttaacaactcataaataacatcatgtaat 16582500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 834124 - 834062
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||| | ||||||||||||    
T  834124 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtagaattaacaactcat 834062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 1199304 - 1199242
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||| | ||||||||||||    
T  1199304 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtagaattaacaactcat 1199242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 45171579 - 45171517
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  45171579 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 45171517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 18301373 - 18301430
Alignment:
Q  162 caacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||||| ||||||||||||||||||||||| | | |||| |||||||||    
T  18301373 caacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 18301430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 15083225 - 15083305
Alignment:
Q  140 tcatgaatagaacacaacttatcaactt-aacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||| || ||||||||| |||||||||||| |||||||||||| | || | |||||||||    
T  15083225 tcatgaataaaagacaacttatcaattttaacataaccatcatcaagtacacttaacaactcatagatatcatcatgtaat 15083305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 31725 - 31804
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  31725 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 31804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 12706201 - 12706122
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  12706201 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 12706122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 12713540 - 12713619
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  12713540 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 12713619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 12722198 - 12722277
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  12722198 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 12722277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 15212912 - 15212983
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaactta 160  Q
    |||||||||| || |||  |||||||||| ||||||||||||||||||| ||||||||| ||  ||||||||    
T  15212912 gacatcatcaaatccacccaataataattcttcttaacatccccttagtactcatgaattgaggacaactta 15212983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 16908588 - 16908509
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  16908588 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 16908509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 18281958 - 18282037
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  18281958 tcatcaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 18282037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 2531410 - 2531349
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||| | ||||||||||||  |||||||||||    
T  2531410 tcatgaataaaagacaacttatcaacttaacataa-catcatcaagtacacctaacaactcat 2531349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 18277994 - 18278056
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  18277994 tcatcaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 18278056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 14565152 - 14565204
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataac 263  Q
    |||||||| ||||||||||||||| |||||||||||||||   ||||||||||    
T  14565152 tcatgtaacatcataacaatctcatattcaacaccataaacagtcatcataac 14565204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 12717287 - 12717366
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | ||| |||||||| |||||||||||| | || | |||||||||    
T  12717287 tcattaataaaagacaacttatcaatttaacataaacatcagcaagtacacttaacaactcatagatatcatcatgtaat 12717366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 15166250 - 15166293
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatca 183  Q
    ||||||||| || |||||||||||||||||||||||| ||||||    
T  15166250 tcatgaataaaagacaacttatcaacttaacataaccatcatca 15166293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 72450 - 72388
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| ||||||| ||||    
T  72450 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaattcat 72388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 76559 - 76497
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| ||||||| ||||    
T  76559 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaattcat 76497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 11302308 - 11302350
Alignment:
Q  141 catgaatagaacacaacttatcaacttaacataaccctcatca 183  Q
    |||||||| || |||||||||||||||||||||||| ||||||    
T  11302308 catgaataaaagacaacttatcaacttaacataaccatcatca 11302350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 146606 - 146663
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  146606 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 146663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 10897869 - 10897812
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  10897869 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 10897812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 18871403 - 18871460
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  18871403 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 18871460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 29795269 - 29795326
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| ||||||||||||||| |||||| ||||||||   |||||||||| ||||    
T  29795269 tcatgtaacatcataacaatctcatattcaataccataaatagtcatcataacatcgt 29795326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 29799088 - 29799145
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| ||||||||||||||| |||||| ||||||||   |||||||||| ||||    
T  29799088 tcatgtaacatcataacaatctcatattcaataccataaatagtcatcataacatcgt 29799145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 11660388 - 11660440
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataac 263  Q
    |||||||| |||||||||| |||| |||||||||||||||   ||||||||||    
T  11660388 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataac 11660440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 6e-74; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 90 - 290
Target Start/End: Complemental strand, 11810078 - 11809878
Alignment:
Q  90 acatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtaca 189  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||| ||||| ||||||||| || ||||||||||||||||| ||||||||||||||||    
T  11810078 acatcatcatatacactcaatattaattcttcttaacatccccttaatgctcgtgaatagaagacgacttatcaacttaacatgaccctcatcaagtaca 11809979  T
Q  190 tttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaacaa 289  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||||||||||||||||||| |||    
T  11809978 tttaacaactcataggtaacatcatgtaatatcataacaacctcacattcaacactatagatgatcatcataacctcgtcatactcatcaacataaccaa 11809879  T
Q  290 c 290  Q
    |    
T  11809878 c 11809878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 89 - 289
Target Start/End: Original strand, 11944951 - 11945143
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| |||||        |||||||||||||||||||||||    
T  11944951 gacatcatcatatacactcaataataattctccttaacatccccttagtgctcatgaatagaagacaac--------ttaacataaccctcatcaagtac 11945042  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||| | |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  11945043 atttaacaactcgtaggtaacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaaca 11945142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 43631114 - 43630922
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||    
T  43631114 gacatcatcatatacactcaataataattctccttaacatccccttagtgctcatgaatagaagacaactta--------acataaccctcatcaagtac 43631023  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||| | |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  43631022 atttaacaactcgtaggtaacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaaca 43630923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 263
Target Start/End: Original strand, 29533887 - 29534011
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat-gggtaacctcatgtaatatcataacaatctcacatt 238  Q
    ||||||||| || |||||||||||||||||||||||| |||||||  |||||||||||||||| |  |||| ||||||||||||||||||| |||| |||    
T  29533887 tcatgaataaaagacaacttatcaacttaacataaccatcatcaaacacatttaacaactcatagcttaacatcatgtaatatcataacaacctcatatt 29533986  T
Q  239 caacaccataaaagatcatcataac 263  Q
    ||||||||||||   ||||||||||    
T  29533987 caacaccataaacagtcatcataac 29534011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 186 - 289
Target Start/End: Complemental strand, 636596 - 636500
Alignment:
Q  186 tacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataa 285  Q
    ||||||||||||||||| ||||||||||||||||||||||||||  || ||||||||       ||||||||||||||||||||||||||||||||||||    
T  636596 tacatttaacaactcataggtaacctcatgtaatatcataacaacatcgcattcaac-------aagatcatcataacctcgtcatactcatcaacataa 636504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 20032297 - 20032180
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    ||||||| ||||| |||| |||||||||| ||||||||||||||||| ||||||||||||||| |        |||||||||||||||||| || |||||    
T  20032297 gacatcaccatatgcactcaataataattcttcttaacatccccttaatgctcatgaatagaaga--------caacttaacataaccctcctcgagtac 20032206  T
Q  189 atttaacaactcatgggtaacctcat 214  Q
    |||||||||||||| |||||| ||||    
T  20032205 atttaacaactcataggtaacatcat 20032180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 21406252 - 21406332
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | | |||| |||||||||    
T  21406252 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 21406332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 22132177 - 22132098
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  22132177 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 22132098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 41801357 - 41801278
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||  |||||||||    
T  41801357 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataatatcatgtaat 41801278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 16370925 - 16370987
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16370925 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 16370987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 41389743 - 41389664
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | ||||||||||||||||||||||||| | |||  |||||||||    
T  41389743 tcatgaataaaaaacaacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataatatcatgtaat 41389664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 32649067 - 32649129
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  32649067 tcatgaataaaagacaacttatcaacttaacataacaatcatcaagtacatttaacaactcat 32649129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 20230218 - 20230138
Alignment:
Q  140 tcatgaatagaacacaacttatcaactt-aacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || ||||||||||||||| ||||||||| |||||||||||| |||||||||||| | |||| |||||||||    
T  20230218 tcatgaataaaagacaacttatcaactttaacataaccatcatcaagtacacttaacaactcatagataacatcatgtaat 20230138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 33796033 - 33796112
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  33796033 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 33796112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 39245234 - 39245170
Alignment:
Q  155 aacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| | |||  |||||||||    
T  39245234 aacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataatatcatgtaat 39245170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 39248789 - 39248725
Alignment:
Q  155 aacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| | |||  |||||||||    
T  39248789 aacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataatatcatgtaat 39248725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 1009262 - 1009341
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  1009262 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 1009341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 1926874 - 1926795
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  1926874 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 1926795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 16376894 - 16376815
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  16376894 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 16376815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 20925888 - 20925809
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  20925888 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 20925809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 52634283 - 52634347
Alignment:
Q  155 aacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  52634283 aacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 52634347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 255 - 290
Target Start/End: Complemental strand, 20032185 - 20032150
Alignment:
Q  255 catcataacctcgtcatactcatcaacataaacaac 290  Q
    |||||||||||| |||||||||||||||||||||||    
T  20032185 catcataacctcatcatactcatcaacataaacaac 20032150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 20439230 - 20439188
Alignment:
Q  141 catgaatagaacacaacttatcaacttaacataaccctcatca 183  Q
    |||||||| || |||||||||||||||||||||||| ||||||    
T  20439230 catgaataaaagacaacttatcaacttaacataaccatcatca 20439188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 28311671 - 28311723
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataac 263  Q
    |||||||| |||||||||| |||| |||||||||||||||   ||||||||||    
T  28311671 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataac 28311723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 89 - 289
Target Start/End: Original strand, 19075846 - 19076038
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||| | |||||||||| | ||||||||||||||||||||||||||||||| |||||        |||||||||||||||||||||||    
T  19075846 gacatcatcatatacattcaataataattctccttaacatccccttagtgctcatgaatagaagacaac--------ttaacataaccctcatcaagtac 19075937  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  19075938 atttaacaactcataggtaacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaaca 19076037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 140 - 290
Target Start/End: Complemental strand, 33474010 - 33473860
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattc 239  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  33474010 tcatgaataaaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaaccccacattc 33473911  T
Q  240 aacaccataaaagatcatcataacctcgtcatactcatcaacataaacaac 290  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33473910 aacatcataaaagatcatcataacctcgtcatactcatcaacataaacaac 33473860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 31253332 - 31253140
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||||| ||| |||||| | ||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||    
T  31253332 gacatcatcatatacactcaatgataattctccttaacatccccttagtgctcatgaatagaagacaactta--------acataaccctcatcaagtac 31253241  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||  | |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  31253240 atttaacaacttgtaggtaacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaaca 31253141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 153 - 290
Target Start/End: Original strand, 36459561 - 36459698
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaag 252  Q
    |||||||||||||||||||||| | |||| |||||||||||||||||||| | |||| |||||||| |||| ||||  ||| |||||||||| |||||      
T  36459561 acaacttatcaacttaacataatcatcattaagtacatttaacaactcatagataacatcatgtaacatcaaaacagcctctcattcaacactataaaca 36459660  T
Q  253 atcatcataacctcgtcatactcatcaacataaacaac 290  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  36459661 atcatcataacatcgtcataatcatcaacataaacaac 36459698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 214
Target Start/End: Complemental strand, 43243867 - 43243764
Alignment:
Q  103 cacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| |        |||||||||||||||||| || |||||||||||||||||||    
T  43243867 cacttaataataattcttcttaacatccccttaatgctcatgaatagaaga--------caacttaacataaccctcctcgagtacatttaacaactcat 43243776  T
Q  203 gggtaacctcat 214  Q
     |||||| ||||    
T  43243775 aggtaacatcat 43243764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 15238196 - 15238117
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | ||||||||||||||||||||||||| | |||| |||||||||    
T  15238196 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataacatcatgtaat 15238117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 22120670 - 22120591
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||| ||||    
T  22120670 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatataat 22120591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 28372160 - 28372098
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28372160 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 28372098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 37600087 - 37600025
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37600087 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 37600025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 19510462 - 19510524
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  19510462 tcatgaataaaagacaacctatcaacttaacataaccatcatcaagtacatttaacaactcat 19510524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 22339012 - 22339074
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  22339012 tcatgaataaaagacaacttatcaacgtaacataaccatcatcaagtacatttaacaactcat 22339074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 38146497 - 38146435
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||||||||||||||||    
T  38146497 tcatgaataaaagacaacttatcaacttaacataatcatcatcaagtacatttaacaactcat 38146435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 10751820 - 10751896
Alignment:
Q  143 tgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||||| || |||||||||||||||||||||| | ||||||||||||||||||||||||| | |||  |||||||||    
T  10751820 tgaataaaagacaacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataatatcatgtaat 10751896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 20912331 - 20912252
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||  | |||||||||||| |||||||||||| | |||| |||||||||    
T  20912331 tcatgaataaaagacaacttatcaacttaacatacacatcatcaagtacacttaacaactcatagataacatcatgtaat 20912252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 22749160 - 22749223
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||||||||| |  |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  22749160 ctcatgaatataggacaacttatcaacttaacataaccatcatcaagtacatttaaccactcat 22749223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 36459412 - 36459483
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaactta 160  Q
    |||||||||| || |||  |||||||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  36459412 gacatcatcaaatccacccaataataatttttcttaacatccccttagtactcatgaatagaagacaactta 36459483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 22335482 - 22335544
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  22335482 tcatgaataaaagacaacttatcaacgtaacataaccatcatcaaatacatttaacaactcat 22335544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 23113481 - 23113419
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||||||||||||||||||| || | |||||||||||||||||||||||||    
T  23113481 tcatgaataaaagacaacttatcaacttaacacaatcatcatcaagtacatttaacaactcat 23113419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 41878730 - 41878668
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||| |||| || |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  41878730 tcataaataaaagacaacttatcaacttaacataactatcatcaagtacatttaacaactcat 41878668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 18354797 - 18354876
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||| ||||||||||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  18354797 tcatgaataaaagacaatttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 18354876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 24768641 - 24768562
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | |||||| ||||| |||||||||||| | || | |||||||||    
T  24768641 tcatgaataaaagacaacttatcaacttaacataaacatcatcaggtacacttaacaactcatagatatcatcatgtaat 24768562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 11219555 - 11219617
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  11219555 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 11219617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 19474251 - 19474172
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  19474251 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 19474172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 20294514 - 20294593
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  20294514 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 20294593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 11224141 - 11224203
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||| |||||||| ||||||||| | |||||||||||| ||||||||||||    
T  11224141 tcatgaataaaagacagcttatcaatttaacataaacatcatcaagtacacttaacaactcat 11224203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 11226157 - 11226219
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||| |||||||| ||||||||| | |||||||||||| ||||||||||||    
T  11226157 tcatgaataaaagacagcttatcaatttaacataaacatcatcaagtacacttaacaactcat 11226219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 11227963 - 11228025
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||| |||||||| ||||||||| | |||||||||||| ||||||||||||    
T  11227963 tcatgaataaaagacagcttatcaatttaacataaacatcatcaagtacacttaacaactcat 11228025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 11229953 - 11230015
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||| |||||||| ||||||||| | |||||||||||| ||||||||||||    
T  11229953 tcatgaataaaagacagcttatcaatttaacataaacatcatcaagtacacttaacaactcat 11230015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 22108527 - 22108449
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||| |  || ||||  ||||||||||||||||||||||||| | |||| |||||||||    
T  22108527 tcatgaataaaagacaacttatcaattatacgtaaca-tcatcaagtacatttaacaactcatagataacatcatgtaat 22108449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 255 - 290
Target Start/End: Complemental strand, 43243769 - 43243734
Alignment:
Q  255 catcataacctcgtcatactcatcaacataaacaac 290  Q
    |||||||||||| |||||||||||||||||||||||    
T  43243769 catcataacctcatcatactcatcaacataaacaac 43243734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 22335654 - 22335711
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  22335654 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 22335711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 23113375 - 23113318
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  23113375 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 23113318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 28371988 - 28371931
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  28371988 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 28371931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 41878624 - 41878567
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  41878624 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacttcgt 41878567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 45221084 - 45220892
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||||| |||||||||| | |||||||||||| |||||||||||||||||| ||||||||        ||||||||||||||||||||    
T  45221084 gacatcatcatatacactcaataataattctccttaacatccccgtagtgctcatgaatagaagacaactta--------acataaccctcatcaagtac 45220993  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  45220992 atttaacaactcataggtaacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaaca 45220893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 140 - 290
Target Start/End: Original strand, 41134 - 41284
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattc 239  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||    
T  41134 tcatgaataaaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaatatcataacaaccccacattc 41233  T
Q  240 aacaccataaaagatcatcataacctcgtcatactcatcaacataaacaac 290  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41234 aacatcataaaagatcatcataacctcgtcatactcatcaacataaacaac 41284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 89 - 284
Target Start/End: Complemental strand, 2249338 - 2249151
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||||| ||||||  || ||||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||    
T  2249338 gacatcatcatatacactcaataattcttcttcttaacatccccttagtgctcatgaatagaagacaactta--------acataaccctcatcaagtac 2249247  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacata 284  Q
    |||||| ||||||| |||||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  2249246 atttaataactcataggtaacatcatgtaatatcataacaacctcacattcaacactatagaagatcatcataacctcgtcatactcatcaacata 2249151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 89 - 290
Target Start/End: Original strand, 5841123 - 5841316
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||| ||||| | |||||||||| | |||||||| | ||||||||||||||||||||         ||||||||||||||||||||||||||||    
T  5841123 gacatcatcagatacattcaataataattctccttaacattctcttagtgctcatgaatagaag--------tcaacttaacataaccctcatcaagtac 5841214  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  5841215 atttaacaactcataggtaacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaaca 5841314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 140 - 290
Target Start/End: Complemental strand, 16326120 - 16325970
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattc 239  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  16326120 tcatgaataaaagacaacttatcaacttgacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaatatcataacaacctcatattc 16326021  T
Q  240 aacaccataaaagatcatcataacctcgtcatactcatcaacataaacaac 290  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  16326020 aacatcataaaagatcatcataacttcgtcatactcatcaacataaacaac 16325970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 153 - 290
Target Start/End: Complemental strand, 16840269 - 16840132
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaag 252  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| | |||  |||||||| |||||||||| |||||||||||||| |||||      
T  16840269 acaacttatcaacttaacataaccatcatcaaatacatttaacaactcatagataaaatcatgtaacatcataacaacctcacattcaacactataaaca 16840170  T
Q  253 atcatcataacctcgtcatactcatcaacataaacaac 290  Q
    ||||||||||| || ||||| |||||||||||||||||    
T  16840169 atcatcataacatcatcataatcatcaacataaacaac 16840132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 153 - 290
Target Start/End: Original strand, 11912440 - 11912577
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaag 252  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||| |||| || |  ||| |||||||||| |||||      
T  11912440 acaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaacatcaaaaaagcctctcattcaacactataaaca 11912539  T
Q  253 atcatcataacctcgtcatactcatcaacataaacaac 290  Q
    ||||||||||| || ||||| |||||||||||||||||    
T  11912540 atcatcataacatcatcataatcatcaacataaacaac 11912577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 140 - 263
Target Start/End: Complemental strand, 10835020 - 10834896
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat-atcataacaatctcacatt 238  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| ||||||||| |||||||||| |||| |||    
T  10835020 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcataacaacctcatatt 10834921  T
Q  239 caacaccataaaagatcatcataac 263  Q
    ||||||||||||   ||||||||||    
T  10834920 caacaccataaacagtcatcataac 10834896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 4590240 - 4590160
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | | |||| |||||||||    
T  4590240 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 4590160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 8491812 - 8491732
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | | |||| |||||||||    
T  8491812 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 8491732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 12853442 - 12853363
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  12853442 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 12853363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 14670026 - 14670105
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  14670026 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 14670105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 16795503 - 16795582
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  16795503 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 16795582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 17318589 - 17318511
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgta 217  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | | |||| |||||||    
T  17318589 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacttcatgta 17318511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 13435818 - 13435897
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||   |||| |||||||||    
T  13435818 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatatataacatcatgtaat 13435897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 3801970 - 3802032
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3801970 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 3802032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 12304174 - 12304236
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12304174 tcatgaataaaatacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 12304236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 214
Target Start/End: Complemental strand, 14648378 - 14648275
Alignment:
Q  103 cacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||| |||||||||| ||||||||||||||||| ||||||||||||||| |        |||||||||||||||||| || |||||||||||||||||||    
T  14648378 cactcaataataattcttcttaacatccccttaatgctcatgaatagaaga--------caacttaacataaccctcctcgagtacatttaacaactcat 14648287  T
Q  203 gggtaacctcat 214  Q
     |||||| ||||    
T  14648286 aggtaacatcat 14648275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 14764874 - 14764812
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14764874 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 14764812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 18899453 - 18899515
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18899453 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 18899515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 20249928 - 20249866
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20249928 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 20249866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 54519597 - 54519659
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  54519597 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 54519659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 14681550 - 14681611
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactca 201  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14681550 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactca 14681611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 23173296 - 23173359
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  23173296 ctcatgaatagaagacaacttatcaacttaacataactatcatcaagtatatttaacaactcat 23173359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 8928945 - 8928871
Alignment:
Q  141 catgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatg 215  Q
    |||||||| || ||||||||||||||||||||||||  |||||||||||||||||||||||| | |||| |||||    
T  8928945 catgaataaaagacaacttatcaacttaacataaccaccatcaagtacatttaacaactcatagataacatcatg 8928871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 9532258 - 9532320
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  9532258 tcatgaataaaagacaacttatcaactcaacataaccatcatcaagtacatttaacaactcat 9532320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 14664425 - 14664487
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||||||||||| |||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  14664425 tcatgaatagaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcat 14664487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 14667589 - 14667651
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||||||||||| |||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  14667589 tcatgaatagaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcat 14667651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 15463878 - 15463940
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||||||||||||||||    
T  15463878 tcatgaataaaagacaacttatcaacttaacataaacgtcatcaagtacatttaacaactcat 15463940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 23372622 - 23372560
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  23372622 tcatgaataaaagacaacttatcaacttaacataacaatcatcaagtacatttaacaactcat 23372560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 51299533 - 51299595
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  51299533 tcatgaataaaagacaacttatcaacttaacataacaatcatcaagtacatttaacaactcat 51299595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 19774198 - 19774259
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactca 201  Q
    ||||||||| || |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  19774198 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacatttaacaactca 19774259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 14068142 - 14068062
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||| |||||||| |||||| | | |||| |||||||||    
T  14068142 ctcatgaatagaagacaacttatcgacttaacataaccatcatcaaatacatttagcaactcctagataacatcatgtaat 14068062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 18933435 - 18933355
Alignment:
Q  140 tcatgaatagaacacaacttatcaactt-aacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || ||||||||||||||| ||||||||| |||||||||||| |||||||||||| | |||| |||||||||    
T  18933435 tcatgaataaaatacaacttatcaactttaacataaccatcatcaagtacacttaacaactcatagataacatcatgtaat 18933355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 30064384 - 30064464
Alignment:
Q  140 tcatgaatagaacacaacttatcaactt-aacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || ||||||||||||||| ||||||||| |||||||||||| |||||||||||| | |||| |||||||||    
T  30064384 tcatgaataaaagacaacttatcaactttaacataaccatcatcaagtacacttaacaactcatagataacatcatgtaat 30064464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 5219847 - 5219926
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  5219847 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 5219926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 211 - 290
Target Start/End: Complemental strand, 8928840 - 8928761
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaacaac 290  Q
    |||||||| |||||||||| |||| ||||||| ||||||||  |||||||||| |||||||| ||| |||||||||||||    
T  8928840 tcatgtaacatcataacaacctcatattcaactccataaaaagtcatcataacatcgtcataatcaacaacataaacaac 8928761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 11912291 - 11912362
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaactta 160  Q
    |||||||||| || |||  |||||||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  11912291 gacatcatcaaatccacccaataataattcttcttaacatccccttagtactcatgaatagaagacaactta 11912362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 51608736 - 51608665
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaactta 160  Q
    |||||||||| || |||  |||||||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  51608736 gacatcatcaaatccacccaataataattcttcttaacatccccttagtactcatgaatagaagacaactta 51608665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 11301744 - 11301682
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  11301744 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcat 11301682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 16840399 - 16840341
Alignment:
Q  108 aataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaact 166  Q
    |||||||||| ||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  16840399 aataataattcttcttaacatccccttagtactcatgaatagaagacaacttaacaact 16840341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 29546017 - 29545955
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||||| || || ||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  29546017 tcatgactaaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcat 29545955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 38312936 - 38312874
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  38312936 tcatgaataaaagacaacttataaacttaacataaccatcatcaagtacatttaaccactcat 38312874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 16751978 - 16751901
Alignment:
Q  142 atgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||| || | |||||||||||||||||||| | ||||||||||||||||||||||||| | |||  |||||||||    
T  16751978 atgaataaaagataacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataatatcatgtaat 16751901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 11853709 - 11853785
Alignment:
Q  143 tgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||||| || |||||||||||||||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  11853709 tgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 11853785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 290
Target Start/End: Original strand, 13435924 - 13436003
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaacaac 290  Q
    ||||| || |||||||||| |||| |||||||||||||||   |||||||||| |||||||| ||| |||||||||||||    
T  13435924 tcatgaaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgtcataatcaacaacataaacaac 13436003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 7108238 - 7108317
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  7108238 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 7108317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 7112173 - 7112252
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  7112173 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 7112252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 11068613 - 11068692
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  11068613 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 11068692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 14497947 - 14498026
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  14497947 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 14498026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 22320129 - 22320208
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  22320129 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 22320208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 22335184 - 22335263
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  22335184 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 22335263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 55021376 - 55021455
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  55021376 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 55021455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 3802076 - 3802133
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| ||||||||||||||| |||||||||||||||   |||||||||| ||||    
T  3802076 tcatgtaacatcataacaatctcatattcaacaccataaacagtcatcataacatcgt 3802133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 9532364 - 9532421
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| ||||||||||||||| |||||||||||||||   |||||||||| ||||    
T  9532364 tcatgtaacatcataacaatctcatattcaacaccataaacagtcatcataacatcgt 9532421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 4108868 - 4108805
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtaca-tttaacaactcat 202  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||||    
T  4108868 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacactttaacaactcat 4108805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 4112717 - 4112654
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtaca-tttaacaactcat 202  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||||    
T  4112717 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacactttaacaactcat 4112654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 11167172 - 11167093
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||| | |||||||||||| | || | |||||||||    
T  11167172 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtaaacttaacaactcatagatatcatcatgtaat 11167093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 255 - 290
Target Start/End: Complemental strand, 14648280 - 14648245
Alignment:
Q  255 catcataacctcgtcatactcatcaacataaacaac 290  Q
    |||||||||||| |||||||||||||||||||||||    
T  14648280 catcataacctcatcatactcatcaacataaacaac 14648245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 15616177 - 15616256
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | || ||||||||| |||||||||||| | || | |||||||||    
T  15616177 tcattaataaaagacaacttatcaatttaacataaacatcttcaagtacacttaacaactcatagatatcatcatgtaat 15616256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 28948461 - 28948520
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaact 199  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||    
T  28948461 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaact 28948520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 12337257 - 12337318
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||| ||||| ||||||||| | |||||||||||| ||||||||||||    
T  12337257 tcatgaataaaagacaact-atcaatttaacataaacatcatcaagtacacttaacaactcat 12337318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 15963497 - 15963559
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||||||||| || ||||||||| | |||||||||||| |||| |||||||    
T  15963497 tcatgaataaaagacaacttattaatttaacataaacatcatcaagtacacttaataactcat 15963559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 15967421 - 15967483
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||||||||| || ||||||||| | |||||||||||| |||| |||||||    
T  15967421 tcatgaataaaagacaacttattaatttaacataaacatcatcaagtacacttaataactcat 15967483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 15971345 - 15971407
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||||||||| || ||||||||| | |||||||||||| |||| |||||||    
T  15971345 tcatgaataaaagacaacttattaatttaacataaacatcatcaagtacacttaataactcat 15971407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 16840502 - 16840452
Alignment:
Q  93 tcatcatatacacttaataataattattcttaacatccccttagtgctcat 143  Q
    |||||| || |||| |||||||||| ||||||||||||||||||| |||||    
T  16840502 tcatcaaatccactcaataataattcttcttaacatccccttagtactcat 16840452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 12304280 - 12304337
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| ||||||||||||||| |||||| ||||||||   |||||||||| ||||    
T  12304280 tcatgtaacatcataacaatctcatattcaataccataaacagtcatcataacatcgt 12304337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 14764768 - 14764711
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  14764768 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 14764711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 18899538 - 18899595
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| ||| |||||| |||| ||||||||||||||||  |||||||||| ||||    
T  18899538 tcatgtaacatcctaacaacctcatattcaacaccataaaaagtcatcataacatcgt 18899595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 23372516 - 23372459
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  23372516 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 23372459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 29545890 - 29545833
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  29545890 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 29545833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 51299639 - 51299696
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  51299639 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 51299696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 54519703 - 54519760
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  54519703 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacttcgt 54519760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 5e-68; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 140 - 290
Target Start/End: Original strand, 23955369 - 23955519
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattc 239  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  23955369 tcatgaataaaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaaccccacattc 23955468  T
Q  240 aacaccataaaagatcatcataacctcgtcatactcatcaacataaacaac 290  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23955469 aacatcataaaagatcatcataacctcgtcatactcatcaacataaacaac 23955519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 89 - 290
Target Start/End: Original strand, 28707816 - 28708009
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||| ||||| | |||||||||| | |||||||| | ||||||||||||||||||||         ||||||||||||||||||||||||||||    
T  28707816 gacatcatcagatacattcaataataattctccttaacattctcttagtgctcatgaatagaag--------tcaacttaacataaccctcatcaagtac 28707907  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  28707908 atttaacaactcataggtaacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaaca 28708007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 91 - 287
Target Start/End: Complemental strand, 9623032 - 9622845
Alignment:
Q  91 catcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacat 190  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||         ||||||||||||||||||||||    
T  9623032 catcatcatatacactcaataataattcttcttaacatccccttagtgctcatgaatagaagacaacttt--------acataaccctcatcaagtacat 9622941  T
Q  191 ttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaac 287  Q
    | |||||||||| |||||| ||||||||||||||||||| |||||||||||||  ||| |  |||||||||| ||||||||||||||||||||||||    
T  9622940 t-aacaactcataggtaacatcatgtaatatcataacaacctcacattcaacattatagagaatcatcataagctcgtcatactcatcaacataaac 9622845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 153 - 290
Target Start/End: Original strand, 25737905 - 25738042
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaag 252  Q
    |||||||||||||||| ||||| | |||||||||||||||| |||||||| | |||| |||||||| ||||||| || |||||| ||||||| |||||      
T  25737905 acaacttatcaacttagcataatcatcatcaagtacatttaccaactcatagataacatcatgtaacatcataaaaacctcacactcaacactataaaca 25738004  T
Q  253 atcatcataacctcgtcatactcatcaacataaacaac 290  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  25738005 atcatcataacctcgtcataatcatcaacataaccaac 25738042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 153 - 290
Target Start/End: Complemental strand, 34297838 - 34297701
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaag 252  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||| |||||||| |||| ||||  ||  |||||||||| |||||      
T  34297838 acaacttatcaacttaacataaccatcagcaagtacatttaacaactcatagataacatcatgtaacatcaaaacagcctttcattcaacactataaaca 34297739  T
Q  253 atcatcataacctcgtcatactcatcaacataaacaac 290  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  34297738 atcatcataacatcgtcataatcatcaacataaacaac 34297701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 18918660 - 18918580
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | | |||| |||||||||    
T  18918660 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 18918580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 12941221 - 12941283
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12941221 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 12941283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 214
Target Start/End: Complemental strand, 14594769 - 14594666
Alignment:
Q  103 cacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||| |||||||||| ||||||||||||||||| ||||||||||||||| |        |||||||||||||||||| || |||||||||||||||||||    
T  14594769 cactcaataataattcttcttaacatccccttaatgctcatgaatagaaga--------caacttaacataaccctcctcgagtacatttaacaactcat 14594678  T
Q  203 gggtaacctcat 214  Q
     |||||| ||||    
T  14594677 aggtaacatcat 14594666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 27222832 - 27222894
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27222832 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 27222894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 2076286 - 2076365
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | ||||||| ||||||||||||||||| | |||| |||||||||    
T  2076286 tcatgaataaaaaacaacttatcaacttaacataatcatcatcaaatacatttaacaactcatagataacatcatgtaat 2076365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 4475795 - 4475857
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  4475795 tcatgaataaaagacaacttatcaacttaacataacaatcatcaagtacatttaacaactcat 4475857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 23537994 - 23538060
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |  ||| |||||||||    
T  23537994 acaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagacaacatcatgtaat 23538060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 1254172 - 1254221
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1254172 acaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 1254221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 7429398 - 7429496
Alignment:
Q  103 cacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||| |||||||||| ||||||||||||||||| ||||||||||||||| |        |||||||||||||||| | || |||||||||||||||||||    
T  7429398 cactcaataataattcttcttaacatccccttaatgctcatgaatagaaga--------caacttaacataacccccctcgagtacatttaacaactcat 7429489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 18953563 - 18953502
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactc 200  Q
    ||||||||||||| |||||||||| ||||||||||| | |||||||||||||||||||||||    
T  18953563 ctcatgaatagaagacaacttatcgacttaacataatcatcatcaagtacatttaacaactc 18953502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 28290971 - 28290914
Alignment:
Q  142 atgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaact 199  Q
    ||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||    
T  28290971 atgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaact 28290914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 23400677 - 23400757
Alignment:
Q  140 tcatgaatagaacacaacttatcaactt-aacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| |  ||||||||||||||| ||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  23400677 tcatgaataaaggacaacttatcaactttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 23400757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 1254019 - 1254090
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaactta 160  Q
    |||||||||| || |||  |||||||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  1254019 gacatcatcaaatccacccaataataattcttcttaacatccccttagtactcatgaatagaagacaactta 1254090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 31479541 - 31479462
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | ||||||| ||||||||||||||||| | |||  |||||||||    
T  31479541 tcatgaataaaagacaacttatcaacttaacataaacatcatcaaatacatttaacaactcatagataatatcatgtaat 31479462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 22075469 - 22075407
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  22075469 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcat 22075407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 34297987 - 34297916
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaactta 160  Q
    |||||||||| || |||  |||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||    
T  34297987 gacatcatcaaatccacccaataataattcttcttaacatcgccttagtactcatgaatagaagacaactta 34297916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 19869187 - 19869249
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  19869187 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 19869249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 23393641 - 23393703
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  23393641 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 23393703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 23413549 - 23413611
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  23413549 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 23413611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 27416606 - 27416544
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||||| |||||||||||||||| | |||||||||||| ||||||||||||    
T  27416606 tcatgaataaaagacaacctatcaacttaacataaacatcatcaagtacacttaacaactcat 27416544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 16622850 - 16622914
Alignment:
Q  155 aacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||||||||||||||||||| | |||||||||||||||||||| |||| | |||  |||||||||    
T  16622850 aacttatcaacttaacataaacatcatcaagtacatttaacaattcatagataatatcatgtaat 16622914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 8242412 - 8242491
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  8242412 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 8242491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 11565401 - 11565480
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  11565401 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 11565480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 11717019 - 11716940
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  11717019 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 11716940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 12620412 - 12620333
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  12620412 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 12620333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 27555540 - 27555618
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||| ||||||||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  27555540 tcatgaataaaagacaact-atcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 27555618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 14470881 - 14470943
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||||||||||||| |||||||| | ||||||||||||  |||||||||||    
T  14470881 tcatgaataaaagacaacttatcaacctaacataaacatcatcaagtacacctaacaactcat 14470943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 25737775 - 25737833
Alignment:
Q  108 aataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaact 166  Q
    |||||||||| ||| ||||||||||||||  ||||||||||||| |||||||| |||||    
T  25737775 aataataattcttcataacatccccttagccctcatgaatagaagacaacttaacaact 25737833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 4475902 - 4475959
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| ||||||||||||||| | |||||||||| ||||    
T  4475902 tcatgtaacatcataacaacctcatattcaacaccataaacggtcatcataacatcgt 4475959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 12941327 - 12941384
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| ||||||||||||||| |||||||||||||||   |||||||||| ||||    
T  12941327 tcatgtaacatcataacaatctcatattcaacaccataaacagtcatcataacatcgt 12941384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 22947680 - 22947729
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  22947680 acaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 22947729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 22951636 - 22951685
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  22951636 acaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 22951685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 23870124 - 23870173
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  23870124 acaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 23870173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 23874080 - 23874129
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  23874080 acaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 23874129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 22861755 - 22861834
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | ||| |||||||| |||||||||||| | || | |||||||||    
T  22861755 tcattaataaaagacaacttatcaatttaacataaacatcaccaagtacacttaacaactcatagatatcatcatgtaat 22861834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 23988303 - 23988382
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| |||| |||| | |||||||||||| |||||||||||| | || | |||||||||    
T  23988303 tcattaataaaagacaacttatcaatttaatataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 23988382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 16758715 - 16758777
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||| |||||||    
T  16758715 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaataactcat 16758777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 7429499 - 7429531
Alignment:
Q  258 cataacctcgtcatactcatcaacataaacaac 290  Q
    ||||||||| |||||||||||||||||||||||    
T  7429499 cataacctcatcatactcatcaacataaacaac 7429531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 5e-65; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 140 - 289
Target Start/End: Original strand, 37379036 - 37379185
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattc 239  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||    
T  37379036 tcatgaataaaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaatatcataacaaccccacattc 37379135  T
Q  240 aacaccataaaagatcatcataacctcgtcatactcatcaacataaacaa 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37379136 aacatcataaaagatcatcataacctcgtcatactcatcaacataaacaa 37379185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 9240674 - 9240736
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9240674 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 9240736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 21074586 - 21074510
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgt 216  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| ||||||    
T  21074586 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgt 21074510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 9783994 - 9784073
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||| |||||||||| | |||| |||||||||    
T  9783994 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacattaaacaactcatagataacatcatgtaat 9784073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 19663636 - 19663574
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19663636 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 19663574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 20260257 - 20260319
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20260257 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 20260319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 6481784 - 6481846
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  6481784 tcatgaataaaagacaacctatcaacttaacataaccatcatcaagtacatttaacaactcat 6481846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 6485251 - 6485313
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  6485251 tcatgaataaaagacaacctatcaacttaacataaccatcatcaagtacatttaacaactcat 6485313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 10686325 - 10686272
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacattta 193  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  10686325 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacattta 10686272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 41532521 - 41532459
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  41532521 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 41532459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 24630126 - 24630047
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  24630126 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 24630047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 24645151 - 24645230
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  24645151 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 24645230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 24647927 - 24648006
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  24647927 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 24648006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 27381072 - 27380993
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  27381072 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 27380993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 27385042 - 27384963
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  27385042 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 27384963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 27600371 - 27600450
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  27600371 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 27600450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 30346736 - 30346657
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  30346736 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 30346657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 10103375 - 10103313
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  10103375 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 10103313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 12902685 - 12902623
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  12902685 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 12902623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 24647094 - 24647156
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  24647094 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 24647156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 31343917 - 31343996
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || ||| |||||||||||||||||  | ||||||||||||  ||||||||||| | || | |||||||||    
T  31343917 tcatgaataaaagacagcttatcaacttaacatatacatcatcaagtacacctaacaactcatagatatcttcatgtaat 31343996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 6262186 - 6262129
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  6262186 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 6262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 19663464 - 19663407
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  19663464 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 19663407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 20260363 - 20260420
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  20260363 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 20260420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 6481890 - 6481942
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataac 263  Q
    |||||||| |||||||||| |||| |||||||||||||||   ||||||||||    
T  6481890 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataac 6481942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 6485357 - 6485409
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataac 263  Q
    |||||||| |||||||||| |||| |||||||||||||||   ||||||||||    
T  6485357 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataac 6485409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 8e-64; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 37839313 - 37839121
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||    
T  37839313 gacatcatcatatacactcaataataattctccttaacatccccttagtgctcatgaatagaagacaactta--------acataaccctcatcaagtac 37839222  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||  | ||||||||| |||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  37839221 atttaacaacttgtaggtaacctcgtgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaaca 37839122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 140 - 290
Target Start/End: Original strand, 28384851 - 28385001
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattc 239  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||    
T  28384851 tcatgaataaaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaatatcataacaaccccacattc 28384950  T
Q  240 aacaccataaaagatcatcataacctcgtcatactcatcaacataaacaac 290  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  28384951 aacatcataaaagatcatcataacatcgtcatactcatcaacataaacaac 28385001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 42598042 - 42597850
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||    
T  42598042 gacatcatcatatacactcaataataattctccttaacatccccttagtgctcatgaatagaagacaactta--------acataaccctcatcaagtac 42597951  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    |||||||||||  | ||||||||| |||||||||||||||| ||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||    
T  42597950 atttaacaacttttaggtaacctcttgtaatatcataacaacctctcattcaacattatataagatcatcataacctcgtcatactcatcaacataaaca 42597851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 631827 - 631747
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  631827 ctcatgaatagaatacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 631747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 10711824 - 10711904
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | | |||| |||||||||    
T  10711824 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 10711904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 10925594 - 10925674
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | | |||| |||||||||    
T  10925594 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 10925674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 22635005 - 22634926
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  22635005 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 22634926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 24048463 - 24048384
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  24048463 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 24048384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 27532751 - 27532831
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| | | |||| |||||||||    
T  27532751 ctcatgaatagaaggcaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 27532831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 12422943 - 12423022
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||  ||||||||||||||||||||||||| | |||| |||||||||    
T  12422943 tcatgaataaaagacaacttatcaacttaacataactatcatcaagtacatttaacaactcatagataacatcatgtaat 12423022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 13818399 - 13818320
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  13818399 tcatgaataaaatgcaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 13818320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 17052524 - 17052445
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | ||||||||||||||||||||||||| | |||| |||||||||    
T  17052524 tcatgaataaaagacaacttatcaacttaacataatcatcatcaagtacatttaacaactcatagataacatcatgtaat 17052445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 15533219 - 15533281
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15533219 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 15533281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 30145783 - 30145845
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30145783 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 30145845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 36036952 - 36037014
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36036952 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 36037014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 13813897 - 13813832
Alignment:
Q  154 caacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  13813897 caacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 13813832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 15223546 - 15223625
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | ||||||||||||||||||||||||| | |||  |||||||||    
T  15223546 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacatttaacaactcatagataatatcatgtaat 15223625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 18211604 - 18211666
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  18211604 tcatgaataaaagacaacttatcaactcaacataaccatcatcaagtacatttaacaactcat 18211666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 20158526 - 20158447
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  20158526 tcatgaataaaagacaacttatcaacttaacataagcatcatcaagtacacttaacaactcatagatatcatcatgtaat 20158447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 20163977 - 20163898
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  20163977 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 20163898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 23997044 - 23996966
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || | |||||||||||||| ||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  23997044 tcatgaataaaagagaacttatcaactta-cataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 23996966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 49549142 - 49549099
Alignment:
Q  159 tatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  49549142 tatcaacttaacataaccatcatcaagtacatttaacaactcat 49549099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 20161199 - 20161123
Alignment:
Q  143 tgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||||| || |||||||||||||||||||||| | | |||||||||| |||||||||||| | || | |||||||||    
T  20161199 tgaataaaagacaacttatcaacttaacataaacattatcaagtacacttaacaactcatagatatcatcatgtaat 20161123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 4562852 - 4562773
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  4562852 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 4562773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 5758534 - 5758455
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  5758534 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 5758455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 9555069 - 9555148
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  9555069 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 9555148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 12486271 - 12486350
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  12486271 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 12486350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 14759070 - 14758991
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  14759070 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 14758991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 14955838 - 14955759
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  14955838 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 14955759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 17807054 - 17807133
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  17807054 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 17807133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 33740836 - 33740915
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  33740836 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 33740915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 25688455 - 25688521
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  25688455 acaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 25688521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 38106945 - 38107036
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat-atcataacaa 229  Q
    |||||||||  || |||| ||||||||||||||||| | |||||||  | |||||||||||||| |  ||| ||||||||| ||||||||||    
T  38106945 ctcatgaatgaaagacaatttatcaacttaacataaacatcatcaatcatatttaacaactcatagacaacatcatgtaatcatcataacaa 38107036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 15533325 - 15533382
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  15533325 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 15533382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 18211731 - 18211788
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  18211731 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 18211788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 36037058 - 36037115
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| ||||| ||||||||| |||||||||||||||   |||||||||| ||||    
T  36037058 tcatgtaacatcatcacaatctcatattcaacaccataaacagtcatcataacatcgt 36037115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 49549055 - 49548998
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| ||||||||| |||||  ||||||||||| ||||    
T  49549055 tcatgtaacatcataacaacctcatattcaacactataaacaatcatcataacttcgt 49548998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 14047317 - 14047361
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatca 183  Q
    |||||||||| || |||||||||||||||||||||| | ||||||    
T  14047317 ctcatgaataaaatacaacttatcaacttaacataatcatcatca 14047361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 24048357 - 24048305
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataac 263  Q
    |||||||| |||||||||| |||| |||||||||||||||   ||||||||||    
T  24048357 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataac 24048305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 173338 - 173154
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||                 |||||||||||||||||||||||    
T  173338 gacatcatcatatacactcaataataattcttcttaacatccccttagtgctcatgagta-----------------ttaacataaccctcatcaagtac 173256  T
Q  189 atttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaaca 288  Q
    ||||||||||| || |||||| |||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  173255 atttaacaactaataggtaacatcatataatatcataacaacctcacattcaacactataaaagatcatcataacctcgtcatactcatcaacataaaca 173156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 123 - 289
Target Start/End: Original strand, 1 - 159
Alignment:
Q  123 taacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatc 222  Q
    ||||||| ||||||||||||||||||||| ||| ||||        |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  1 taacatctccttagtgctcatgaatagaagacagctta--------acataaccctcatcaagtacatttaacaactcaaaggtaacctcatgtaatatc 92  T
Q  223 ataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaacaa 289  Q
    ||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  93 ataacaacctcgcattcaacactatagaagatcatcataacctcgtcatactcatcaacataaacaa 159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 169 - 290
Target Start/End: Complemental strand, 3315 - 3194
Alignment:
Q  169 acataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  3315 acataaccctcatcaagtacatttaacaactcataggtaacctcatgtaatatcataacaacctcgcattcaacactatagaagatcatcataacctcgt 3216  T
Q  269 catactcatcaacataaacaac 290  Q
    ||||||||||||||||||||||    
T  3215 catactcatcaacataaacaac 3194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 75; Significance: 1e-34; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 199 - 289
Target Start/End: Original strand, 175425 - 175515
Alignment:
Q  199 tcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaacaa 289  Q
    |||| |||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  175425 tcataggtaacctcatgtaatatcataacaaccccacattcaacatcataaaagatcatcataacctcgtcatactcatcaacataaacaa 175515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 163782 - 163705
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaact 166  Q
    |||||||||| || |||| |||||||||| ||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  163782 gacatcatcaaatccactcaataataattcttcttaacatccccttagtactcatgaatagaagacaacttaacaact 163705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 163633 - 163588
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaac 198  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  163633 acaagttatcaacttaacataaccctcatcaagtacatttaacaac 163588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 290
Target Start/End: Complemental strand, 153785 - 153706
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaacaac 290  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| |||||||| | | |||||||||||||    
T  153785 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgtcataataaacaacataaacaac 153706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 163594 - 163528
Alignment:
Q  224 taacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaacaac 290  Q
    |||||| |||||||||||||| |||||  ||| ||| ||| |||||||| |||||||||||||||||    
T  163594 taacaacctcacattcaacactataaacaatcgtcacaacatcgtcataatcatcaacataaacaac 163528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 153 - 290
Target Start/End: Original strand, 4134 - 4271
Alignment:
Q  153 acaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaatatcataacaatctcacattcaacaccataaaag 252  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||| |||| || |  ||| |||||||||| |||||      
T  4134 acaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaacatcaaaaaagcctctcattcaacactataaaca 4233  T
Q  253 atcatcataacctcgtcatactcatcaacataaacaac 290  Q
    ||||||||||| || ||||| |||||||||||||||||    
T  4234 atcatcataacatcatcataatcatcaacataaacaac 4271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 3985 - 4056
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaactta 160  Q
    |||||||||| || |||  |||||||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  3985 gacatcatcaaatccacccaataataattcttcttaacatccccttagtactcatgaatagaagacaactta 4056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 3973 - 4053
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | | |||| |||||||||    
T  3973 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 4053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 24017 - 23937
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | | |||| |||||||||    
T  24017 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 23937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 62919 - 62839
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | | |||| |||||||||    
T  62919 ctcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 62839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 74411 - 74331
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  74411 ctcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 74331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 7039 - 6960
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  7039 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 6960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 37281 - 37202
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  37281 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 37202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 25646 - 25569
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgta 217  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||    
T  25646 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgta 25569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 37277 - 37197
Alignment:
Q  139 ctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| | | |||| |||||||||    
T  37277 ctcatgaatagaagacaacttatcgacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 37197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 34011 - 34128
Alignment:
Q  89 gacatcatcatatacacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtac 188  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| | |        |||| ||||||||| ||| || |||||    
T  34011 gacatcatcatatacactcaataataattcttcttaacatccccttaatgctcatgaatagcaga--------caacctaacataacactcctcgagtac 34102  T
Q  189 atttaacaactcatgggtaacctcat 214  Q
    |||||||||||||| |||||| ||||    
T  34103 atttaacaactcataggtaacatcat 34128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 290
Target Start/End: Original strand, 34123 - 34158
Alignment:
Q  255 catcataacctcgtcatactcatcaacataaacaac 290  Q
    ||||||||||||||||||||||||||||||||||||    
T  34123 catcataacctcgtcatactcatcaacataaacaac 34158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 52; Significance: 7e-21; HSPs: 4)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 28472 - 28551
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||  ||||||||||||||||||||||||| | |||| |||||||||    
T  28472 tcatgaataaaagacaacttatcaacttaacataacgatcatcaagtacatttaacaactcatagataacatcatgtaat 28551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 33937 - 34016
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||  ||||||||||||||||||||||||| | |||| |||||||||    
T  33937 tcatgaataaaagacaacttatcaacttaacataacgatcatcaagtacatttaacaactcatagataacatcatgtaat 34016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 28580 - 28657
Alignment:
Q  213 atgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaacaac 290  Q
    |||||| |||||||||| |||| |||||||| ||||||   |||||||||| |||||||| |||  ||||||||||||    
T  28580 atgtaacatcataacaacctcatattcaacatcataaacagtcatcataacatcgtcataatcaataacataaacaac 28657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 34045 - 34122
Alignment:
Q  213 atgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgtcatactcatcaacataaacaac 290  Q
    |||||| |||||||||| |||| |||||||| ||||||   |||||||||| |||||||| |||  ||||||||||||    
T  34045 atgtaacatcataacaacctcatattcaacatcataaacagtcatcataacatcgtcataatcaataacataaacaac 34122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 214
Target Start/End: Complemental strand, 547 - 444
Alignment:
Q  103 cacttaataataattattcttaacatccccttagtgctcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||| |||||||||| ||||||||||||||||| ||||||||||||||| |        |||||||||||||||||| || |||||||||||||||||||    
T  547 cactcaataataattcttcttaacatccccttaatgctcatgaatagaaga--------caacttaacataaccctcctcgagtacatttaacaactcat 456  T
Q  203 gggtaacctcat 214  Q
     |||||| ||||    
T  455 aggtaacatcat 444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 200 - 262
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  200 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 10900 - 10838
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10900 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 10838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 10794 - 10737
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  10794 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 10737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 109601 - 109663
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  109601 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 109663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 224221 - 224159
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  224221 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 224159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 224115 - 224058
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  224115 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 224058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 8818 - 8739
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||||| |||||| |||||||||||||||| | | |||| |||||||||    
T  8818 tcatgaataaaagacaacttatcaacttaacataaccatcatcatgtacatttaacaactcgtagataacatcatgtaat 8739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 5242 - 5304
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    |||||||||  | |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5242 tcatgaataatagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcat 5304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 3595 - 3533
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  3595 tcatgaataaaagacaacttatcaacttaacataacaatcatcaagtacatttaacaactcat 3533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 3489 - 3432
Alignment:
Q  211 tcatgtaatatcataacaatctcacattcaacaccataaaagatcatcataacctcgt 268  Q
    |||||||| |||||||||| |||| |||||||||||||||   |||||||||| ||||    
T  3489 tcatgtaacatcataacaacctcatattcaacaccataaacagtcatcataacatcgt 3432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 10767 - 10827
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactc 200  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  10767 tcatgaataaaatacaacttatcaacttaacataaccatcatcaagtacacttaacaactc 10827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 14844 - 14923
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  14844 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcatagatatcttcatgtaat 14923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 18823 - 18882
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaact 199  Q
    ||||||||| |  |||||||||||||||||||||||| ||||||||||||||||||||||    
T  18823 tcatgaataaatgacaacttatcaacttaacataaccatcatcaagtacatttaacaact 18882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 899 - 837
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  899 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaactcat 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 21396 - 21339
Alignment:
Q  162 caacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||    
T  21396 caacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaat 21339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 8577 - 8656
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || ||||||||| |||||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  8577 tcatgaataaaagacaacttattaacttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 8656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 11138 - 11059
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    ||||||||| || |||||||||||||||||||||| | |||||| ||||| |||||||||||| | || | |||||||||    
T  11138 tcatgaataaaagacaacttatcaacttaacataaacatcatcaggtacacttaacaactcatagatatcatcatgtaat 11059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 15653 - 15591
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  15653 tcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 15591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 70755 - 70817
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || ||||| |||||||||||||||| | |||||||||||| ||||||||||||    
T  70755 tcatgaataaaagacaacctatcaacttaacataaacatcatcaagtacacttaacaactcat 70817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 208655 - 208691
Alignment:
Q  253 atcatcataacctcgtcatactcatcaacataaacaa 289  Q
    |||||||||||||||||||||||||||||||||||||    
T  208655 atcatcataacctcgtcatactcatcaacataaacaa 208691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 6399 - 6320
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  6399 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 6320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 11051 - 11130
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  11051 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 11130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 34206 - 34127
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  34206 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 34127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 60404 - 60325
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| | |||||||||||| |||||||||||| | || | |||||||||    
T  60404 tcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatcatgtaat 60325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 5609 - 5547
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||||||||||||||||||| | ||||||||||||  ||| |||||||    
T  5609 tcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacctaagaactcat 5547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 5826 - 5887
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||||||| || |||||| ||||||||||||||| | |||||||||||| ||||||||||||    
T  5826 tcatgaataaaagacaact-atcaacttaacataaacatcatcaagtacacttaacaactcat 5887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 11777 - 11839
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcat 202  Q
    ||||| ||| || ||||| |||||||||||||||| | |||||||||||| ||||||||||||    
T  11777 tcatgtataaaagacaacatatcaacttaacataagcatcatcaagtacacttaacaactcat 11839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 68634 - 68555
Alignment:
Q  140 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcatgggtaacctcatgtaat 219  Q
    |||| |||| || |||||||||||| ||||||||| |  ||||||||||| |||||||||||| | || | |||||||||    
T  68634 tcattaataaaagacaacttatcaatttaacataaacaccatcaagtacacttaacaactcatagatatcatcatgtaat 68555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 120 times since January 2019
Visitors: 6713