View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0880_low_33 (Length: 246)
Name: NF0880_low_33
Description: NF0880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0880_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 11144073 - 11144124
Alignment:
Q |
171 |
taatcaaggggaagacgtatgcgtttggtttgtgttttataggatcctgatg |
222 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
11144073 |
taatcaaggggaagacgtatgcgtttggtttgtgttttataggatcctgatg |
11144124 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1604131 - 1604071
Alignment:
Q |
1 |
ctgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
|||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||| |
|
|
T |
1604131 |
ctgttttttgtggtgtgttctcgaggggcagcaggatgtgtagtgcctctttgttggctgc |
1604071 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 11143973 - 11144030
Alignment:
Q |
71 |
ggtttctgtttctgtcactaggaaccgttgtgatgttggtgttttaggggatgcacct |
128 |
Q |
|
|
||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
11143973 |
ggtttttggttctgtcactaggaaccgttgtgatgttggtgttttaggggctgcacct |
11144030 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11143885 - 11143945
Alignment:
Q |
1 |
ctgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
|||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||| |
|
|
T |
11143885 |
ctgttttttgtggtgtgttcttgaggggcagcaggctgtgtagtgcatctttgttggctgc |
11143945 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44551912 - 44551972
Alignment:
Q |
1 |
ctgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
|||||||||||||| | |||||| ||||||||||||||||||||||||| |||||||||| |
|
|
T |
44551912 |
ctgttttttgtggtgttctctcgaggggcagcaggctgtgtagtgcctctgtgttggctgc |
44551972 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 1604044 - 1603987
Alignment:
Q |
71 |
ggtttctgtttctgtcactaggaaccgttgtgatgttggtgttttaggggatgcacct |
128 |
Q |
|
|
||||| || ||||||||||||||| |||| |||||||||||||||||||| ||||||| |
|
|
T |
1604044 |
ggtttttggttctgtcactaggaatcgttatgatgttggtgttttaggggctgcacct |
1603987 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 44552012 - 44552054
Alignment:
Q |
83 |
tgtcactaggaaccgttgtgatgttggtgttttaggggatgca |
125 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||| |||| |
|
|
T |
44552012 |
tgtcactcggaaccgttgtgatgttggtgttttaggggctgca |
44552054 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 1661518 - 1661459
Alignment:
Q |
2 |
tgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
|||||||| |||| || |||||| || ||||||||||||| |||||||| |||||||||| |
|
|
T |
1661518 |
tgttttttatggtgtgctctcgagggacagcaggctgtgtggtgcctctgtgttggctgc |
1661459 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 11144247 - 11144294
Alignment:
Q |
2 |
tgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctc |
49 |
Q |
|
|
||||||||||||| || ||||||||| ||||||||||||| ||||||| |
|
|
T |
11144247 |
tgttttttgtggtgtgctctcgaaggacagcaggctgtgtggtgcctc |
11144294 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 44552115 - 44552151
Alignment:
Q |
186 |
cgtatgcgtttggtttgtgttttataggatcctgatg |
222 |
Q |
|
|
|||||||||||| ||||||||||||||| |||||||| |
|
|
T |
44552115 |
cgtatgcgtttgatttgtgttttatagggtcctgatg |
44552151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 30402981 - 30402930
Alignment:
Q |
171 |
taatcaaggggaagacgtatgcgtttggtttgtgttttataggatcctgatg |
222 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
30402981 |
taatcaaggggaagacgtatgcgtttggtttgtgttttataggatcctgatg |
30402930 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 29394136 - 29394085
Alignment:
Q |
171 |
taatcaaggggaagacgtatgcgtttggtttgtgttttataggatcctgatg |
222 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
T |
29394136 |
taatcaaggggaagacgtatgtgtttggtttgtgttttataggatcctgatg |
29394085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 30409538 - 30409487
Alignment:
Q |
171 |
taatcaaggggaagacgtatgcgtttggtttgtgttttataggatcctgatg |
222 |
Q |
|
|
||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
30409538 |
taatcaaggggaagacgtatgcgtttgatttgtgttttataggatcctgatg |
30409487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 29394236 - 29394179
Alignment:
Q |
71 |
ggtttctgtttctgtcactaggaaccgttgtgatgttggtgttttaggggatgcacct |
128 |
Q |
|
|
||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
29394236 |
ggtttttggttctgtcactaggaaccgttgtgatgttggtgttttaggggctgcacct |
29394179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 35163218 - 35163275
Alignment:
Q |
71 |
ggtttctgtttctgtcactaggaaccgttgtgatgttggtgttttaggggatgcacct |
128 |
Q |
|
|
||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
35163218 |
ggtttttggttctgtcactaggaaccgttgtgatgttggtgttttaggggctgcacct |
35163275 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30403169 - 30403109
Alignment:
Q |
1 |
ctgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
|||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||| |
|
|
T |
30403169 |
ctgttttttgtggtgtgttcttgaggggcagcaggctgtgtagtgcatctttgttggctgc |
30403109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30409726 - 30409666
Alignment:
Q |
1 |
ctgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
|||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||| |
|
|
T |
30409726 |
ctgttttttgtggtgtgttcttgaggggcagcaggctgtgtagtgcatctttgttggctgc |
30409666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35163130 - 35163190
Alignment:
Q |
1 |
ctgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
|||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||| |
|
|
T |
35163130 |
ctgttttttgtggtgtgttcttgaggggcagcaggctgtgtagtgcatctttgttggctgc |
35163190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 35163318 - 35163361
Alignment:
Q |
171 |
taatcaaggggaagacgtatgcgtttggtttgtgttttatagga |
214 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
35163318 |
taatcaaggggaagacgtatgcgtttggtttgtgttttatagga |
35163361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 30403065 - 30403024
Alignment:
Q |
87 |
actaggaaccgttgtgatgttggtgttttaggggatgcacct |
128 |
Q |
|
|
|||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
30403065 |
actaggaaccgttgtgatgttggtgttttaggggctgcacct |
30403024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 30409622 - 30409581
Alignment:
Q |
87 |
actaggaaccgttgtgatgttggtgttttaggggatgcacct |
128 |
Q |
|
|
|||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
30409622 |
actaggaaccgttgtgatgttggtgttttaggggctgcacct |
30409581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 29393863 - 29393818
Alignment:
Q |
83 |
tgtcactaggaaccgttgtgatgttggtgttttaggggatgcacct |
128 |
Q |
|
|
||||||| |||||||||||||||| ||||||||||||| ||||||| |
|
|
T |
29393863 |
tgtcactcggaaccgttgtgatgtaggtgttttaggggctgcacct |
29393818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29394324 - 29394264
Alignment:
Q |
1 |
ctgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
|||||||| ||||| |||||| || ||||||||| ||||||||||| |||||||| ||||| |
|
|
T |
29394324 |
ctgtttttcgtggtgtgttcttgaggggcagcagactgtgtagtgcatctttgttagctgc |
29394264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 30402807 - 30402760
Alignment:
Q |
2 |
tgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctc |
49 |
Q |
|
|
||||||||||||| || ||||||||| ||||||||||||| ||||||| |
|
|
T |
30402807 |
tgttttttgtggtgtgctctcgaaggacagcaggctgtgtggtgcctc |
30402760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 30409364 - 30409317
Alignment:
Q |
2 |
tgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctc |
49 |
Q |
|
|
||||||||||||| || ||||||||| ||||||||||||| ||||||| |
|
|
T |
30409364 |
tgttttttgtggtgtgctctcgaaggacagcaggctgtgtggtgcctc |
30409317 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 35163492 - 35163550
Alignment:
Q |
2 |
tgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctg |
60 |
Q |
|
|
||||||||||||| || |||||| || || |||||||||| |||||||| ||||||||| |
|
|
T |
35163492 |
tgttttttgtggtgtgctctcgagggacaacaggctgtgtggtgcctctgtgttggctg |
35163550 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 55040210 - 55040161
Alignment:
Q |
171 |
taatcaaggggaagacgtatgcgtttggtttgtgttttataggatcctga |
220 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
55040210 |
taatcaaggggaagacgtatgtgtttggtttgtgttttataggatcctga |
55040161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 55040398 - 55040338
Alignment:
Q |
1 |
ctgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
|||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||| |
|
|
T |
55040398 |
ctgttttttgtggtgtgttcttgaggggcagcaggctgtgtagtgcatctttgttggctgc |
55040338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 55040310 - 55040256
Alignment:
Q |
71 |
ggtttctgtttctgtcactaggaaccgttgtgatgttggtgttttaggggatgca |
125 |
Q |
|
|
||||| || ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
55040310 |
ggtttttggttctgtcactaggaaccgttgtgatgttggtgttttaggggctgca |
55040256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 55040036 - 55039977
Alignment:
Q |
2 |
tgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
||||||||||||| || |||||| || ||||||||||||| |||||||| |||||||||| |
|
|
T |
55040036 |
tgttttttgtggtgtgctctcgagggacagcaggctgtgtggtgcctctgtgttggctgc |
55039977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32445889 - 32445949
Alignment:
Q |
1 |
ctgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
|||||||||||||| || |||||| |||||||||||||||||||||||||||||| ||||| |
|
|
T |
32445889 |
ctgttttttgtggtgtgctctcgaggggcagcaggctgtgtagtgcctctttgttagctgc |
32445949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 14986945 - 14986903
Alignment:
Q |
19 |
tctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
|||||| |||||| |||||||||||||||||| |||||||||| |
|
|
T |
14986945 |
tctcgaggggcagtaggctgtgtagtgcctctgtgttggctgc |
14986903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9260897 - 9260837
Alignment:
Q |
1 |
ctgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
|||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||||| |
|
|
T |
9260897 |
ctgttttttgtggtgtgctctcgaggggcagcaggctgtgtagtgcctctgtgttggctgc |
9260837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 9260809 - 9260755
Alignment:
Q |
71 |
ggtttctgtttctgtcactaggaaccgttgtgatgttggtgttttaggggatgca |
125 |
Q |
|
|
||||| || ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
9260809 |
ggtttttggttctgtcactaggaaccgttgtgatgttggtgttttaggggttgca |
9260755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 9260346 - 9260293
Alignment:
Q |
169 |
cataatcaaggggaagacgtatgcgtttggtttgtgttttataggatcctgatg |
222 |
Q |
|
|
|||||||| | || || |||||||||||||||||||||||||||| |||||||| |
|
|
T |
9260346 |
cataatcatgaggcaggcgtatgcgtttggtttgtgttttatagggtcctgatg |
9260293 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 9260434 - 9260389
Alignment:
Q |
83 |
tgtcactaggaaccgttgtgatgttggtgttttaggggatgcacct |
128 |
Q |
|
|
||||||| |||||| ||||||||||||||||||||||| ||||||| |
|
|
T |
9260434 |
tgtcactcggaaccattgtgatgttggtgttttaggggctgcacct |
9260389 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 9260533 - 9260474
Alignment:
Q |
2 |
tgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
|||||||||| || || |||||| || ||||||||||||||||||||| |||||||||| |
|
|
T |
9260533 |
tgttttttgtagtgtgctctcgagggacagcaggctgtgtagtgcctcggtgttggctgc |
9260474 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 9260688 - 9260652
Alignment:
Q |
186 |
cgtatgcgtttggtttgtgttttataggatcctgatg |
222 |
Q |
|
|
|||||| ||||||||||| |||||||||||||||||| |
|
|
T |
9260688 |
cgtatgtgtttggtttgtattttataggatcctgatg |
9260652 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 13947876 - 13947921
Alignment:
Q |
83 |
tgtcactaggaaccgttgtgatgttggtgttttaggggatgcacct |
128 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
13947876 |
tgtcactaggaaccgttgtgatgttggtgttttaggggctgcacct |
13947921 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 13948127 - 13948186
Alignment:
Q |
2 |
tgttttttgtggtctgttctcgaagggcagcaggctgtgtagtgcctctttgttggctgc |
61 |
Q |
|
|
||||||||||||| ||||||||| || ||||||||||||| |||||||| |||||||||| |
|
|
T |
13948127 |
tgttttttgtggtgtgttctcgagggacagcaggctgtgtggtgcctctgtgttggctgc |
13948186 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 13948226 - 13948271
Alignment:
Q |
83 |
tgtcactaggaaccgttgtgatgttggtgttttaggggatgcacct |
128 |
Q |
|
|
||||||| |||||||||||||||| ||||||||||||| ||||||| |
|
|
T |
13948226 |
tgtcactcggaaccgttgtgatgtaggtgttttaggggctgcacct |
13948271 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 13948329 - 13948365
Alignment:
Q |
186 |
cgtatgcgtttggtttgtgttttataggatcctgatg |
222 |
Q |
|
|
|||||||||||||||||||||||||| | |||||||| |
|
|
T |
13948329 |
cgtatgcgtttggtttgtgttttatatggtcctgatg |
13948365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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