View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0880_low_8 (Length: 357)

Name: NF0880_low_8
Description: NF0880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0880_low_8
NF0880_low_8
[»] scaffold0004 (5 HSPs)
scaffold0004 (175-277)||(118086-118188)
scaffold0004 (179-277)||(386341-386439)
scaffold0004 (178-277)||(323225-323324)
scaffold0004 (178-266)||(203165-203253)
scaffold0004 (183-277)||(112547-112641)
[»] scaffold0309 (1 HSPs)
scaffold0309 (175-277)||(10311-10413)
[»] chr5 (64 HSPs)
chr5 (175-277)||(21890624-21890726)
chr5 (178-277)||(24716391-24716490)
chr5 (178-277)||(22235785-22235884)
chr5 (178-277)||(24620160-24620259)
chr5 (175-277)||(21496559-21496661)
chr5 (178-277)||(24749419-24749518)
chr5 (178-272)||(23574164-23574258)
chr5 (179-272)||(21563843-21563936)
chr5 (183-272)||(21831631-21831720)
chr5 (178-277)||(20342686-20342785)
chr5 (178-272)||(18776192-18776286)
chr5 (175-277)||(25848476-25848578)
chr5 (178-272)||(27685270-27685364)
chr5 (178-272)||(37291366-37291460)
chr5 (178-251)||(919-992)
chr5 (175-272)||(40709199-40709296)
chr5 (181-277)||(22462359-22462455)
chr5 (178-277)||(21339151-21339250)
chr5 (178-272)||(16356924-16357018)
chr5 (178-272)||(19770382-19770476)
chr5 (178-272)||(22135090-22135184)
chr5 (178-272)||(22332757-22332851)
chr5 (178-272)||(23516963-23517057)
chr5 (178-272)||(27668360-27668454)
chr5 (178-272)||(34566916-34567010)
chr5 (176-277)||(23471649-23471750)
chr5 (178-266)||(20799182-20799270)
chr5 (176-272)||(23440645-23440741)
chr5 (178-277)||(20821857-20821956)
chr5 (178-277)||(22503083-22503182)
chr5 (186-277)||(25423619-25423710)
chr5 (178-272)||(14999609-14999703)
chr5 (178-272)||(27518829-27518923)
chr5 (178-272)||(27610776-27610870)
chr5 (178-272)||(29475943-29476037)
chr5 (178-272)||(41771264-41771358)
chr5 (184-277)||(20467961-20468054)
chr5 (178-242)||(37545396-37545460)
chr5 (178-277)||(14886856-14886955)
chr5 (178-277)||(22381603-22381702)
chr5 (178-277)||(23079954-23080053)
chr5 (175-265)||(21497913-21498003)
chr5 (178-272)||(22348845-22348939)
chr5 (175-233)||(26738614-26738672)
chr5 (281-341)||(21502217-21502277)
chr5 (181-277)||(24798262-24798358)
chr5 (178-263)||(27011488-27011573)
chr5 (136-180)||(14613701-14613745)
chr5 (178-254)||(28916301-28916377)
chr5 (178-254)||(28923656-28923732)
chr5 (178-277)||(20774163-20774262)
chr5 (136-177)||(5455814-5455855)
chr5 (136-177)||(18893764-18893805)
chr5 (281-326)||(26012096-26012141)
chr5 (281-341)||(21329558-21329618)
chr5 (178-254)||(28894830-28894906)
chr5 (136-174)||(5581046-5581084)
chr5 (136-174)||(17937654-17937692)
chr5 (174-256)||(19566575-19566657)
chr5 (136-174)||(24794483-24794521)
chr5 (136-174)||(24799148-24799186)
chr5 (202-263)||(21937067-21937128)
chr5 (142-174)||(7506794-7506826)
chr5 (142-174)||(38015014-38015046)
[»] scaffold0523 (1 HSPs)
scaffold0523 (175-277)||(387-489)
[»] chr4 (51 HSPs)
chr4 (175-277)||(15003047-15003149)
chr4 (175-277)||(15078122-15078224)
chr4 (175-277)||(15246411-15246513)
chr4 (177-277)||(15319640-15319740)
chr4 (178-272)||(8706408-8706502)
chr4 (176-277)||(14850789-14850890)
chr4 (178-279)||(27900876-27900977)
chr4 (178-277)||(1648960-1649059)
chr4 (178-277)||(15358773-15358872)
chr4 (175-277)||(14691389-14691491)
chr4 (178-272)||(16354873-16354967)
chr4 (175-272)||(1639853-1639950)
chr4 (178-266)||(15147318-15147406)
chr4 (178-277)||(11206914-11207013)
chr4 (175-266)||(15414720-15414811)
chr4 (178-277)||(29453220-29453319)
chr4 (178-277)||(33223413-33223512)
chr4 (178-277)||(44661549-44661648)
chr4 (178-272)||(8053051-8053145)
chr4 (178-272)||(8386902-8386996)
chr4 (178-272)||(12477090-12477184)
chr4 (178-272)||(12524166-12524260)
chr4 (178-272)||(14303406-14303500)
chr4 (178-272)||(14681057-14681151)
chr4 (178-272)||(19778221-19778315)
chr4 (178-272)||(27711826-27711920)
chr4 (178-272)||(29038832-29038926)
chr4 (175-272)||(18297692-18297789)
chr4 (178-277)||(3264477-3264576)
chr4 (178-277)||(20891472-20891571)
chr4 (178-272)||(16251873-16251967)
chr4 (178-272)||(23956237-23956331)
chr4 (178-272)||(40473530-40473624)
chr4 (188-272)||(14159970-14160054)
chr4 (132-175)||(23434721-23434764)
chr4 (178-272)||(7090922-7091016)
chr4 (178-272)||(18226874-18226968)
chr4 (178-277)||(12342546-12342645)
chr4 (178-230)||(16146404-16146456)
chr4 (178-256)||(13248135-13248213)
chr4 (142-176)||(17667775-17667809)
chr4 (281-322)||(13912-13953)
chr4 (178-263)||(9291325-9291410)
chr4 (202-263)||(15292854-15292915)
chr4 (281-322)||(46640517-46640558)
chr4 (281-322)||(53082213-53082254)
chr4 (136-180)||(392468-392512)
chr4 (215-263)||(9849176-9849224)
chr4 (178-230)||(14266369-14266421)
chr4 (136-176)||(35147924-35147964)
chr4 (285-341)||(39706353-39706409)
[»] scaffold0139 (3 HSPs)
scaffold0139 (175-277)||(835-937)
scaffold0139 (178-277)||(28040-28139)
scaffold0139 (178-277)||(34293-34392)
[»] chr7 (68 HSPs)
chr7 (175-277)||(19147688-19147790)
chr7 (175-277)||(20747087-20747189)
chr7 (178-277)||(15102273-15102372)
chr7 (175-277)||(14263914-14264016)
chr7 (178-277)||(6413991-6414090)
chr7 (178-277)||(16071964-16072063)
chr7 (178-277)||(16950141-16950240)
chr7 (175-277)||(15625028-15625130)
chr7 (181-277)||(11305933-11306029)
chr7 (175-266)||(12206481-12206572)
chr7 (181-277)||(1077-1173)
chr7 (178-277)||(11388098-11388197)
chr7 (178-277)||(13666017-13666116)
chr7 (178-277)||(13968338-13968437)
chr7 (178-272)||(8708084-8708178)
chr7 (178-272)||(11236910-11237004)
chr7 (178-272)||(13686543-13686637)
chr7 (178-272)||(15160754-15160848)
chr7 (178-254)||(13021837-13021913)
chr7 (178-277)||(8211798-8211897)
chr7 (178-277)||(12456182-12456281)
chr7 (178-277)||(26118275-26118374)
chr7 (178-272)||(17013-17107)
chr7 (178-272)||(8199107-8199201)
chr7 (178-272)||(9596536-9596630)
chr7 (178-272)||(10871474-10871568)
chr7 (178-272)||(12687980-12688074)
chr7 (178-272)||(14332876-14332970)
chr7 (178-272)||(18551455-18551549)
chr7 (178-272)||(44791048-44791142)
chr7 (175-275)||(15154351-15154451)
chr7 (178-266)||(18178221-18178309)
chr7 (178-277)||(14286046-14286145)
chr7 (178-277)||(14434171-14434270)
chr7 (181-277)||(11771933-11772029)
chr7 (178-277)||(14130353-14130452)
chr7 (132-174)||(2025003-2025045)
chr7 (175-233)||(14040172-14040230)
chr7 (175-233)||(14350202-14350260)
chr7 (178-254)||(14955099-14955175)
chr7 (181-277)||(15340914-15341010)
chr7 (178-277)||(18053623-18053722)
chr7 (178-277)||(23199413-23199512)
chr7 (178-277)||(23505540-23505639)
chr7 (178-277)||(49152781-49152880)
chr7 (190-272)||(21662452-21662534)
chr7 (178-271)||(11552800-11552893)
chr7 (202-263)||(4440431-4440492)
chr7 (281-341)||(67745-67805)
chr7 (202-254)||(17924154-17924206)
chr7 (136-174)||(1319127-1319165)
chr7 (136-174)||(2282443-2282481)
chr7 (136-174)||(11298455-11298493)
chr7 (136-174)||(11306819-11306857)
chr7 (136-174)||(26088692-26088730)
chr7 (136-174)||(26112480-26112518)
chr7 (136-174)||(26119137-26119175)
chr7 (136-174)||(42059904-42059942)
chr7 (285-326)||(2280184-2280225)
chr7 (136-177)||(11880422-11880463)
chr7 (281-326)||(14044761-14044806)
chr7 (281-326)||(14354791-14354836)
chr7 (285-322)||(20220253-20220290)
chr7 (215-272)||(23203310-23203367)
chr7 (215-272)||(23509437-23509494)
chr7 (202-263)||(27107480-27107541)
chr7 (142-174)||(40921679-40921711)
chr7 (285-341)||(47831807-47831863)
[»] chr6 (61 HSPs)
chr6 (175-277)||(22796460-22796562)
chr6 (174-277)||(21471951-21472054)
chr6 (178-277)||(21563960-21564059)
chr6 (178-277)||(21569819-21569918)
chr6 (178-277)||(19453774-19453873)
chr6 (179-270)||(25768546-25768637)
chr6 (178-277)||(8762761-8762860)
chr6 (178-277)||(14381295-14381394)
chr6 (178-277)||(17415840-17415939)
chr6 (181-272)||(25609694-25609785)
chr6 (178-272)||(5839052-5839146)
chr6 (175-264)||(1641123-1641212)
chr6 (181-272)||(19865044-19865135)
chr6 (178-277)||(24364766-24364865)
chr6 (178-272)||(2874636-2874730)
chr6 (178-277)||(34645414-34645513)
chr6 (178-272)||(1542917-1543011)
chr6 (178-272)||(22078523-22078617)
chr6 (178-272)||(24313001-24313095)
chr6 (178-266)||(18407781-18407869)
chr6 (178-277)||(10468677-10468776)
chr6 (178-277)||(18795044-18795143)
chr6 (178-277)||(19879652-19879751)
chr6 (178-272)||(16626550-16626644)
chr6 (178-272)||(16927473-16927567)
chr6 (178-272)||(25112906-25113000)
chr6 (178-272)||(27187790-27187884)
chr6 (178-272)||(27261356-27261450)
chr6 (178-272)||(27331266-27331360)
chr6 (178-272)||(27392006-27392100)
chr6 (175-277)||(27559816-27559918)
chr6 (175-277)||(27560445-27560547)
chr6 (175-277)||(28282641-28282743)
chr6 (178-272)||(28292205-28292299)
chr6 (178-272)||(29591753-29591847)
chr6 (178-277)||(15459690-15459789)
chr6 (181-272)||(17032740-17032831)
chr6 (178-265)||(22434223-22434310)
chr6 (178-272)||(16963200-16963294)
chr6 (178-272)||(22762288-22762382)
chr6 (178-272)||(28263030-28263124)
chr6 (178-272)||(28341779-28341873)
chr6 (178-277)||(5297034-5297133)
chr6 (175-272)||(23078820-23078917)
chr6 (202-262)||(15078209-15078269)
chr6 (176-264)||(15896446-15896534)
chr6 (178-277)||(11280333-11280432)
chr6 (281-326)||(20109153-20109198)
chr6 (202-263)||(21927583-21927644)
chr6 (215-263)||(23027558-23027606)
chr6 (281-341)||(27333279-27333339)
chr6 (281-341)||(27394019-27394079)
chr6 (136-175)||(22408071-22408110)
chr6 (136-174)||(1072028-1072066)
chr6 (136-174)||(11583732-11583770)
chr6 (136-174)||(21894638-21894676)
chr6 (202-263)||(1648656-1648717)
chr6 (202-263)||(16098428-16098489)
chr6 (202-263)||(16382215-16382276)
chr6 (202-263)||(18837750-18837811)
chr6 (281-326)||(19668386-19668431)
[»] chr2 (62 HSPs)
chr2 (175-277)||(21125380-21125482)
chr2 (169-277)||(24641854-24641962)
chr2 (178-277)||(19652275-19652374)
chr2 (178-277)||(23276897-23276996)
chr2 (178-277)||(23294079-23294178)
chr2 (178-272)||(23064198-23064292)
chr2 (178-272)||(24675610-24675704)
chr2 (178-266)||(24707716-24707804)
chr2 (178-277)||(11358097-11358196)
chr2 (178-277)||(24948710-24948809)
chr2 (178-277)||(27365302-27365401)
chr2 (178-272)||(16925481-16925575)
chr2 (178-272)||(16999121-16999215)
chr2 (175-272)||(16982270-16982367)
chr2 (175-272)||(17063835-17063932)
chr2 (175-272)||(17067493-17067590)
chr2 (176-272)||(16923008-16923104)
chr2 (178-277)||(20828380-20828479)
chr2 (178-277)||(20833106-20833205)
chr2 (178-272)||(9610257-9610351)
chr2 (178-272)||(21145269-21145363)
chr2 (178-272)||(22325084-22325178)
chr2 (178-272)||(23189128-23189222)
chr2 (178-272)||(24262491-24262585)
chr2 (178-272)||(24710154-24710248)
chr2 (175-277)||(24825505-24825607)
chr2 (178-272)||(41608613-41608707)
chr2 (175-272)||(27218134-27218231)
chr2 (178-277)||(1063872-1063971)
chr2 (178-272)||(10868971-10869065)
chr2 (178-272)||(21325494-21325588)
chr2 (178-264)||(24876985-24877071)
chr2 (178-272)||(27371390-27371484)
chr2 (175-277)||(27787859-27787961)
chr2 (183-272)||(20442741-20442830)
chr2 (178-266)||(22756699-22756787)
chr2 (178-277)||(12574474-12574573)
chr2 (178-277)||(31830779-31830878)
chr2 (178-272)||(30211145-30211239)
chr2 (178-272)||(44385797-44385891)
chr2 (190-272)||(45529644-45529726)
chr2 (175-212)||(23087568-23087605)
chr2 (202-263)||(25128792-25128853)
chr2 (136-175)||(31835306-31835345)
chr2 (136-174)||(70264-70302)
chr2 (136-174)||(1063047-1063085)
chr2 (136-174)||(1068440-1068478)
chr2 (136-174)||(4070269-4070307)
chr2 (136-174)||(20832281-20832319)
chr2 (136-174)||(20851543-20851581)
chr2 (136-174)||(27730885-27730923)
chr2 (136-174)||(28927410-28927448)
chr2 (136-174)||(30195255-30195293)
chr2 (136-174)||(31829954-31829992)
chr2 (281-338)||(298876-298933)
chr2 (281-322)||(20520254-20520295)
chr2 (281-322)||(23207296-23207337)
chr2 (285-322)||(25108906-25108943)
chr2 (142-175)||(35586755-35586788)
chr2 (281-337)||(7679589-7679645)
chr2 (215-263)||(22761806-22761854)
chr2 (142-174)||(24480368-24480400)
[»] scaffold0102 (1 HSPs)
scaffold0102 (178-277)||(40259-40358)
[»] scaffold0165 (2 HSPs)
scaffold0165 (175-277)||(4948-5050)
scaffold0165 (285-326)||(27814-27855)
[»] scaffold0034 (4 HSPs)
scaffold0034 (175-277)||(13587-13689)
scaffold0034 (184-277)||(67897-67990)
scaffold0034 (178-277)||(4639-4738)
scaffold0034 (281-326)||(32551-32596)
[»] scaffold0053 (2 HSPs)
scaffold0053 (181-277)||(48720-48816)
scaffold0053 (179-277)||(57503-57601)
[»] scaffold0751 (1 HSPs)
scaffold0751 (178-277)||(2315-2414)
[»] scaffold0574 (1 HSPs)
scaffold0574 (178-277)||(895-994)
[»] scaffold0326 (1 HSPs)
scaffold0326 (178-277)||(18223-18322)
[»] scaffold0232 (1 HSPs)
scaffold0232 (178-277)||(2561-2660)
[»] scaffold0156 (1 HSPs)
scaffold0156 (178-277)||(27746-27845)
[»] scaffold0149 (2 HSPs)
scaffold0149 (178-277)||(6923-7022)
scaffold0149 (178-277)||(11354-11453)
[»] chr3 (81 HSPs)
chr3 (178-277)||(14574048-14574147)
chr3 (178-277)||(15952879-15952978)
chr3 (178-277)||(11303684-11303783)
chr3 (178-277)||(17492749-17492848)
chr3 (178-277)||(16828113-16828212)
chr3 (175-277)||(14086789-14086891)
chr3 (178-272)||(9522828-9522922)
chr3 (175-277)||(12850190-12850292)
chr3 (178-277)||(12360453-12360552)
chr3 (178-277)||(13972031-13972130)
chr3 (178-272)||(17489959-17490053)
chr3 (175-272)||(48425553-48425650)
chr3 (178-253)||(10384088-10384163)
chr3 (178-277)||(16329572-16329671)
chr3 (178-277)||(16836421-16836520)
chr3 (178-272)||(5424857-5424951)
chr3 (178-272)||(6600845-6600939)
chr3 (178-272)||(12498357-12498451)
chr3 (178-272)||(13252799-13252893)
chr3 (182-272)||(14126521-14126611)
chr3 (178-272)||(15348172-15348266)
chr3 (178-272)||(16492108-16492202)
chr3 (178-272)||(16635882-16635976)
chr3 (178-272)||(26792326-26792420)
chr3 (178-272)||(43163206-43163300)
chr3 (175-272)||(15248253-15248350)
chr3 (178-266)||(15724867-15724955)
chr3 (178-277)||(4678557-4678656)
chr3 (178-277)||(10419956-10420055)
chr3 (178-277)||(13322563-13322662)
chr3 (181-272)||(14876426-14876517)
chr3 (181-272)||(15061868-15061959)
chr3 (175-266)||(15227765-15227856)
chr3 (178-277)||(16338423-16338522)
chr3 (181-272)||(16371525-16371616)
chr3 (178-277)||(28754437-28754536)
chr3 (178-272)||(10906319-10906413)
chr3 (178-272)||(15589319-15589413)
chr3 (178-272)||(16806853-16806947)
chr3 (178-272)||(20061981-20062075)
chr3 (178-277)||(8758993-8759092)
chr3 (178-277)||(41177641-41177740)
chr3 (178-277)||(44777366-44777465)
chr3 (178-277)||(47124063-47124162)
chr3 (178-272)||(10005709-10005803)
chr3 (132-174)||(12558310-12558352)
chr3 (178-272)||(16412209-16412303)
chr3 (178-272)||(16756512-16756606)
chr3 (178-272)||(53384945-53385039)
chr3 (176-272)||(15208998-15209094)
chr3 (178-277)||(13942143-13942242)
chr3 (178-256)||(16380860-16380938)
chr3 (181-230)||(11960992-11961041)
chr3 (180-277)||(18134257-18134354)
chr3 (175-221)||(13002024-13002070)
chr3 (178-272)||(15402437-15402531)
chr3 (199-272)||(15015683-15015756)
chr3 (178-227)||(26008954-26009003)
chr3 (136-176)||(21353520-21353560)
chr3 (142-177)||(28760214-28760249)
chr3 (187-277)||(267179-267269)
chr3 (136-174)||(3781523-3781561)
chr3 (178-272)||(15339378-15339472)
chr3 (142-176)||(50654769-50654803)
chr3 (136-174)||(51247076-51247114)
chr3 (136-174)||(51478189-51478227)
chr3 (136-174)||(53570010-53570048)
chr3 (281-322)||(12377940-12377981)
chr3 (202-263)||(15576893-15576954)
chr3 (178-239)||(16692269-16692330)
chr3 (186-263)||(16742639-16742716)
chr3 (202-263)||(18748808-18748869)
chr3 (281-322)||(22110413-22110454)
chr3 (288-341)||(25476453-25476506)
chr3 (281-338)||(27165250-27165307)
chr3 (281-338)||(28194693-28194750)
chr3 (281-322)||(43925977-43926018)
chr3 (142-175)||(47122495-47122528)
chr3 (142-175)||(47129861-47129894)
chr3 (281-338)||(53301612-53301669)
chr3 (202-254)||(17193236-17193288)
[»] chr1 (38 HSPs)
chr1 (178-277)||(19854818-19854917)
chr1 (178-256)||(41308330-41308408)
chr1 (178-277)||(19662896-19662995)
chr1 (178-277)||(24099358-24099457)
chr1 (175-272)||(50620004-50620101)
chr1 (178-277)||(37677585-37677684)
chr1 (178-272)||(21749446-21749540)
chr1 (178-272)||(21830808-21830902)
chr1 (175-272)||(16369799-16369896)
chr1 (175-272)||(51333253-51333350)
chr1 (178-277)||(20294917-20295016)
chr1 (178-277)||(20939818-20939917)
chr1 (178-272)||(16078412-16078506)
chr1 (178-272)||(16350359-16350453)
chr1 (178-272)||(21837455-21837549)
chr1 (178-272)||(22362004-22362098)
chr1 (178-272)||(33390789-33390883)
chr1 (181-277)||(20856516-20856612)
chr1 (178-277)||(22432871-22432970)
chr1 (178-272)||(17044775-17044869)
chr1 (178-272)||(19106872-19106966)
chr1 (175-277)||(20835643-20835745)
chr1 (175-266)||(19760632-19760723)
chr1 (178-272)||(41354229-41354323)
chr1 (178-277)||(31539752-31539851)
chr1 (136-175)||(11523106-11523145)
chr1 (136-175)||(39188400-39188439)
chr1 (136-174)||(27691856-27691894)
chr1 (136-174)||(33683007-33683045)
chr1 (281-322)||(16368347-16368388)
chr1 (202-263)||(20831161-20831222)
chr1 (202-263)||(22135326-22135387)
chr1 (281-322)||(35261139-35261180)
chr1 (281-322)||(50614178-50614219)
chr1 (281-322)||(50622006-50622047)
chr1 (142-174)||(5027371-5027403)
chr1 (204-272)||(20139361-20139429)
chr1 (142-174)||(48429218-48429250)
[»] scaffold0600 (1 HSPs)
scaffold0600 (175-277)||(4393-4495)
[»] scaffold0585 (1 HSPs)
scaffold0585 (175-277)||(6722-6824)
[»] chr8 (66 HSPs)
chr8 (175-277)||(19851964-19852066)
chr8 (175-277)||(19858000-19858102)
chr8 (175-277)||(21840970-21841072)
chr8 (178-277)||(803799-803898)
chr8 (178-277)||(31416600-31416699)
chr8 (176-272)||(20388653-20388749)
chr8 (178-277)||(20975777-20975876)
chr8 (175-277)||(22371493-22371595)
chr8 (178-277)||(23655483-23655582)
chr8 (175-277)||(20010026-20010128)
chr8 (175-277)||(22377580-22377682)
chr8 (175-277)||(22383755-22383857)
chr8 (178-266)||(16408182-16408270)
chr8 (178-277)||(1266794-1266893)
chr8 (178-277)||(16271350-16271449)
chr8 (178-272)||(21166668-21166762)
chr8 (178-272)||(21393996-21394090)
chr8 (178-272)||(21788490-21788584)
chr8 (178-272)||(30313275-30313369)
chr8 (175-272)||(23650594-23650691)
chr8 (178-266)||(22120311-22120399)
chr8 (178-277)||(6604214-6604313)
chr8 (178-277)||(27355104-27355203)
chr8 (178-272)||(17674154-17674248)
chr8 (178-272)||(18857133-18857227)
chr8 (178-272)||(19113246-19113340)
chr8 (178-272)||(20017881-20017975)
chr8 (175-277)||(20396251-20396353)
chr8 (178-272)||(21251497-21251591)
chr8 (178-272)||(21921866-21921960)
chr8 (178-272)||(22046929-22047023)
chr8 (181-267)||(22987760-22987846)
chr8 (181-277)||(14565701-14565797)
chr8 (178-277)||(6679667-6679766)
chr8 (178-272)||(19978523-19978617)
chr8 (178-272)||(22040415-22040509)
chr8 (178-272)||(22133172-22133266)
chr8 (175-277)||(31570968-31571070)
chr8 (178-272)||(32600700-32600794)
chr8 (178-277)||(22051419-22051518)
chr8 (178-277)||(22061559-22061658)
chr8 (178-277)||(29303552-29303651)
chr8 (178-272)||(15533936-15534030)
chr8 (178-272)||(19485001-19485095)
chr8 (178-239)||(12305314-12305375)
chr8 (181-277)||(23949478-23949574)
chr8 (136-177)||(236915-236956)
chr8 (136-177)||(801420-801461)
chr8 (136-177)||(806773-806814)
chr8 (178-272)||(22164323-22164417)
chr8 (178-263)||(21850477-21850562)
chr8 (281-341)||(6520368-6520428)
chr8 (281-341)||(38855312-38855372)
chr8 (136-175)||(14568404-14568443)
chr8 (136-174)||(4519472-4519510)
chr8 (136-174)||(6603389-6603427)
chr8 (136-174)||(6610214-6610252)
chr8 (136-174)||(6678842-6678880)
chr8 (136-174)||(12912980-12913018)
chr8 (136-174)||(14564873-14564911)
chr8 (136-174)||(14766951-14766989)
chr8 (136-174)||(22459448-22459486)
chr8 (186-263)||(23900840-23900917)
chr8 (281-322)||(24353039-24353080)
chr8 (281-322)||(37116366-37116407)
chr8 (142-174)||(9204086-9204118)
[»] scaffold0234 (1 HSPs)
scaffold0234 (176-272)||(24762-24858)
[»] scaffold0403 (2 HSPs)
scaffold0403 (178-277)||(3312-3411)
scaffold0403 (178-272)||(6893-6987)
[»] scaffold0106 (3 HSPs)
scaffold0106 (178-277)||(31931-32030)
scaffold0106 (178-272)||(17962-18056)
scaffold0106 (178-272)||(14560-14654)
[»] scaffold0020 (3 HSPs)
scaffold0020 (178-277)||(101238-101337)
scaffold0020 (183-272)||(180725-180814)
scaffold0020 (285-341)||(15842-15898)
[»] scaffold0192 (2 HSPs)
scaffold0192 (175-277)||(26660-26762)
scaffold0192 (175-277)||(27042-27144)
[»] scaffold0108 (1 HSPs)
scaffold0108 (175-277)||(47642-47744)
[»] scaffold0049 (1 HSPs)
scaffold0049 (175-277)||(51549-51651)
[»] scaffold1124 (1 HSPs)
scaffold1124 (178-277)||(619-718)
[»] scaffold0298 (3 HSPs)
scaffold0298 (178-277)||(20504-20603)
scaffold0298 (178-277)||(13047-13146)
scaffold0298 (180-277)||(16817-16914)
[»] scaffold0010 (3 HSPs)
scaffold0010 (178-277)||(42019-42118)
scaffold0010 (175-266)||(2439-2530)
scaffold0010 (178-277)||(47085-47184)
[»] scaffold0001 (4 HSPs)
scaffold0001 (178-277)||(90618-90717)
scaffold0001 (180-277)||(114703-114800)
scaffold0001 (175-272)||(390891-390988)
scaffold0001 (235-277)||(89940-89982)
[»] scaffold0120 (2 HSPs)
scaffold0120 (175-277)||(1210-1312)
scaffold0120 (178-277)||(6544-6643)
[»] scaffold0076 (2 HSPs)
scaffold0076 (175-277)||(33363-33465)
scaffold0076 (202-263)||(40803-40864)
[»] scaffold0244 (1 HSPs)
scaffold0244 (178-275)||(17880-17977)
[»] scaffold0180 (1 HSPs)
scaffold0180 (175-272)||(32443-32540)
[»] scaffold0348 (1 HSPs)
scaffold0348 (178-277)||(6705-6804)
[»] scaffold0124 (3 HSPs)
scaffold0124 (178-277)||(90-189)
scaffold0124 (180-277)||(11411-11508)
scaffold0124 (178-263)||(7510-7595)
[»] scaffold0026 (1 HSPs)
scaffold0026 (178-277)||(37723-37822)
[»] scaffold0323 (1 HSPs)
scaffold0323 (179-277)||(4984-5082)
[»] scaffold0249 (1 HSPs)
scaffold0249 (175-277)||(1658-1760)
[»] scaffold0235 (1 HSPs)
scaffold0235 (179-277)||(21357-21455)
[»] scaffold0081 (2 HSPs)
scaffold0081 (178-272)||(19123-19217)
scaffold0081 (178-272)||(50014-50108)
[»] scaffold0023 (4 HSPs)
scaffold0023 (178-272)||(130669-130763)
scaffold0023 (175-266)||(4151-4242)
scaffold0023 (179-271)||(29071-29163)
scaffold0023 (190-272)||(59287-59369)
[»] scaffold0413 (2 HSPs)
scaffold0413 (175-272)||(1517-1614)
scaffold0413 (281-322)||(12587-12628)
[»] scaffold0011 (3 HSPs)
scaffold0011 (181-277)||(26219-26315)
scaffold0011 (178-277)||(195390-195488)
scaffold0011 (181-277)||(149094-149190)
[»] scaffold0404 (1 HSPs)
scaffold0404 (178-277)||(5271-5370)
[»] scaffold0113 (1 HSPs)
scaffold0113 (178-277)||(25551-25650)
[»] scaffold0035 (1 HSPs)
scaffold0035 (178-277)||(3272-3371)
[»] scaffold0454 (1 HSPs)
scaffold0454 (178-272)||(7460-7554)
[»] scaffold0293 (1 HSPs)
scaffold0293 (178-272)||(13008-13102)
[»] scaffold0228 (1 HSPs)
scaffold0228 (178-272)||(217-311)
[»] scaffold0126 (1 HSPs)
scaffold0126 (178-279)||(41440-41539)
[»] scaffold0079 (1 HSPs)
scaffold0079 (178-272)||(25495-25589)
[»] scaffold0040 (2 HSPs)
scaffold0040 (175-277)||(15395-15497)
scaffold0040 (175-266)||(113184-113275)
[»] scaffold0037 (2 HSPs)
scaffold0037 (183-277)||(116591-116685)
scaffold0037 (202-262)||(98560-98620)
[»] scaffold0031 (1 HSPs)
scaffold0031 (178-272)||(63722-63816)
[»] scaffold0028 (4 HSPs)
scaffold0028 (178-272)||(15457-15551)
scaffold0028 (175-277)||(50200-50302)
scaffold0028 (178-272)||(8995-9089)
scaffold0028 (178-272)||(43675-43769)
[»] scaffold0012 (2 HSPs)
scaffold0012 (175-277)||(219103-219205)
scaffold0012 (175-254)||(229561-229640)
[»] scaffold0333 (3 HSPs)
scaffold0333 (175-272)||(16173-16270)
scaffold0333 (285-341)||(6611-6667)
scaffold0333 (285-341)||(13991-14047)
[»] scaffold0080 (1 HSPs)
scaffold0080 (175-272)||(7915-8012)
[»] scaffold0064 (2 HSPs)
scaffold0064 (175-252)||(28479-28556)
scaffold0064 (175-252)||(40470-40547)
[»] scaffold0239 (1 HSPs)
scaffold0239 (181-277)||(12471-12567)
[»] scaffold0396 (1 HSPs)
scaffold0396 (178-277)||(4552-4651)
[»] scaffold0130 (1 HSPs)
scaffold0130 (175-254)||(10449-10528)
[»] scaffold0104 (1 HSPs)
scaffold0104 (178-277)||(1049-1148)
[»] scaffold0101 (1 HSPs)
scaffold0101 (178-277)||(5138-5237)
[»] scaffold0093 (1 HSPs)
scaffold0093 (178-277)||(26782-26881)
[»] scaffold0089 (1 HSPs)
scaffold0089 (178-277)||(16399-16498)
[»] scaffold0060 (1 HSPs)
scaffold0060 (178-277)||(43304-43403)
[»] scaffold1710 (1 HSPs)
scaffold1710 (187-277)||(419-509)
[»] scaffold0761 (2 HSPs)
scaffold0761 (178-272)||(4790-4884)
scaffold0761 (202-263)||(86-147)
[»] scaffold0621 (1 HSPs)
scaffold0621 (178-272)||(1988-2082)
[»] scaffold0476 (1 HSPs)
scaffold0476 (178-272)||(9864-9958)
[»] scaffold0282 (1 HSPs)
scaffold0282 (175-277)||(16102-16204)
[»] scaffold0100 (2 HSPs)
scaffold0100 (175-277)||(25405-25507)
scaffold0100 (281-326)||(23944-23989)
[»] scaffold0074 (1 HSPs)
scaffold0074 (175-277)||(3658-3760)
[»] scaffold0044 (2 HSPs)
scaffold0044 (178-272)||(1141-1235)
scaffold0044 (178-272)||(14881-14975)
[»] scaffold0017 (1 HSPs)
scaffold0017 (178-272)||(197169-197263)
[»] scaffold0005 (2 HSPs)
scaffold0005 (178-272)||(278521-278615)
scaffold0005 (181-277)||(260832-260928)
[»] scaffold0367 (1 HSPs)
scaffold0367 (180-277)||(6924-7021)
[»] scaffold0342 (1 HSPs)
scaffold0342 (176-277)||(18891-18992)
[»] scaffold0222 (1 HSPs)
scaffold0222 (180-277)||(3041-3138)
[»] scaffold0284 (1 HSPs)
scaffold0284 (180-272)||(22390-22482)
[»] scaffold0546 (1 HSPs)
scaffold0546 (181-272)||(4096-4187)
[»] scaffold0518 (1 HSPs)
scaffold0518 (178-277)||(11290-11389)
[»] scaffold0109 (2 HSPs)
scaffold0109 (181-272)||(9120-9211)
scaffold0109 (181-272)||(33264-33355)
[»] scaffold0071 (1 HSPs)
scaffold0071 (178-277)||(48893-48992)
[»] scaffold0067 (3 HSPs)
scaffold0067 (178-277)||(51866-51965)
scaffold0067 (178-277)||(60900-60999)
scaffold0067 (178-277)||(67288-67387)
[»] scaffold0066 (2 HSPs)
scaffold0066 (178-277)||(68277-68376)
scaffold0066 (187-263)||(46684-46760)
[»] scaffold0647 (1 HSPs)
scaffold0647 (183-277)||(1434-1528)
[»] scaffold0507 (2 HSPs)
scaffold0507 (175-277)||(9488-9590)
scaffold0507 (202-263)||(54-115)
[»] scaffold0483 (2 HSPs)
scaffold0483 (178-264)||(9782-9868)
scaffold0483 (220-277)||(12057-12114)
[»] scaffold0431 (1 HSPs)
scaffold0431 (178-272)||(7887-7981)
[»] scaffold0411 (1 HSPs)
scaffold0411 (175-277)||(14765-14867)
[»] scaffold0358 (1 HSPs)
scaffold0358 (178-272)||(6570-6664)
[»] scaffold0220 (1 HSPs)
scaffold0220 (178-272)||(514-608)
[»] scaffold0161 (1 HSPs)
scaffold0161 (178-272)||(385-479)
[»] scaffold0058 (1 HSPs)
scaffold0058 (179-277)||(19642-19740)
[»] scaffold0029 (3 HSPs)
scaffold0029 (178-272)||(109502-109596)
scaffold0029 (181-277)||(95688-95784)
scaffold0029 (185-277)||(113087-113179)
[»] scaffold0022 (2 HSPs)
scaffold0022 (178-272)||(80185-80279)
scaffold0022 (175-233)||(126929-126987)
[»] scaffold0375 (1 HSPs)
scaffold0375 (178-267)||(3510-3599)
[»] scaffold0465 (1 HSPs)
scaffold0465 (181-272)||(925-1016)
[»] scaffold0190 (1 HSPs)
scaffold0190 (178-277)||(33005-33104)
[»] scaffold0042 (2 HSPs)
scaffold0042 (185-272)||(65933-66020)
scaffold0042 (178-272)||(39511-39604)
[»] scaffold0676 (1 HSPs)
scaffold0676 (178-272)||(6535-6629)
[»] scaffold0459 (1 HSPs)
scaffold0459 (178-272)||(935-1029)
[»] scaffold0379 (1 HSPs)
scaffold0379 (175-277)||(12663-12765)
[»] scaffold0324 (1 HSPs)
scaffold0324 (182-272)||(19693-19783)
[»] scaffold0091 (1 HSPs)
scaffold0091 (178-272)||(8311-8405)
[»] scaffold0009 (1 HSPs)
scaffold0009 (178-256)||(249134-249212)
[»] scaffold1001 (1 HSPs)
scaffold1001 (181-253)||(195-267)
[»] scaffold0213 (1 HSPs)
scaffold0213 (178-277)||(6021-6120)
[»] scaffold0114 (2 HSPs)
scaffold0114 (178-277)||(44026-44125)
scaffold0114 (178-277)||(45038-45137)
[»] scaffold0090 (2 HSPs)
scaffold0090 (178-276)||(19370-19468)
scaffold0090 (178-276)||(23532-23630)
[»] scaffold0084 (1 HSPs)
scaffold0084 (178-272)||(5742-5836)
[»] scaffold0894 (1 HSPs)
scaffold0894 (199-272)||(2916-2989)
[»] scaffold0319 (1 HSPs)
scaffold0319 (183-272)||(1791-1880)
[»] scaffold0132 (2 HSPs)
scaffold0132 (202-263)||(15201-15262)
scaffold0132 (202-263)||(44083-44144)
[»] scaffold1355 (1 HSPs)
scaffold1355 (184-272)||(1203-1291)
[»] scaffold0111 (1 HSPs)
scaffold0111 (187-263)||(3619-3695)
[»] scaffold0046 (1 HSPs)
scaffold0046 (202-277)||(81518-81593)
[»] scaffold0554 (1 HSPs)
scaffold0554 (202-263)||(3703-3764)
[»] scaffold0327 (1 HSPs)
scaffold0327 (190-263)||(7701-7774)
[»] scaffold0305 (1 HSPs)
scaffold0305 (202-263)||(11201-11262)
[»] scaffold0225 (1 HSPs)
scaffold0225 (178-263)||(23915-24000)
[»] scaffold0123 (1 HSPs)
scaffold0123 (281-326)||(25121-25166)
[»] scaffold0021 (1 HSPs)
scaffold0021 (202-263)||(33113-33174)
[»] scaffold0692 (1 HSPs)
scaffold0692 (202-277)||(3561-3636)
[»] scaffold0008 (1 HSPs)
scaffold0008 (202-277)||(232102-232177)
[»] scaffold1403 (1 HSPs)
scaffold1403 (281-331)||(560-610)
[»] scaffold0652 (1 HSPs)
scaffold0652 (136-174)||(2619-2657)
[»] scaffold0540 (1 HSPs)
scaffold0540 (178-272)||(8020-8113)
[»] scaffold0302 (1 HSPs)
scaffold0302 (181-263)||(5699-5781)
[»] scaffold0270 (2 HSPs)
scaffold0270 (215-277)||(4429-4491)
scaffold0270 (215-277)||(11559-11621)
[»] scaffold0077 (1 HSPs)
scaffold0077 (178-256)||(27973-28051)
[»] scaffold0808 (1 HSPs)
scaffold0808 (202-263)||(754-815)
[»] scaffold0606 (1 HSPs)
scaffold0606 (136-177)||(9602-9643)
[»] scaffold0357 (1 HSPs)
scaffold0357 (285-326)||(16165-16206)
[»] scaffold0243 (1 HSPs)
scaffold0243 (284-341)||(6187-6244)
[»] scaffold0218 (1 HSPs)
scaffold0218 (281-326)||(8135-8180)
[»] scaffold0530 (1 HSPs)
scaffold0530 (285-341)||(1099-1155)
[»] scaffold0369 (1 HSPs)
scaffold0369 (215-263)||(20-68)
[»] scaffold0262 (1 HSPs)
scaffold0262 (142-174)||(243-275)
[»] scaffold0041 (1 HSPs)
scaffold0041 (142-174)||(51384-51416)


Alignment Details
Target: scaffold0004 (Bit Score: 91; Significance: 5e-44; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 118086 - 118188
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  118086 gttctctccgactgaccatctgtttgcggatgataagccgaactcaacctcaacttagaacccaaggcatcttgcaaactcttccaaaatcttgaagtga 118185  T
Q  275 acc 277  Q
    |||    
T  118186 acc 118188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 386341 - 386439
Alignment:
Q  179 tctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  386341 tctccgactgaccatctgtttgcggatgataagccgaactcaacctcaacttagaacccaaggcatcttgcaaactcttccaaaaccttgaagtgaacc 386439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 323225 - 323324
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||| || |||||||| ||||||||||||| ||| ||||| ||||||||||    
T  323225 ctctccgactgaccatctgtctgcggatgataagccaaactcagcctcaacttcgaacccaaggcgtcttgcaaactcttccagaatctagaagtgaacc 323324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 203253 - 203165
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||||| | |||||||||    
T  203253 ctctccgactgaccatctgtttgcggatgataagccgaactcaacctcaacttagaacccaacgcctcttgcaaacttttccaaaatct 203165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 112547 - 112641
Alignment:
Q  183 cgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||| | ||||||||| ||| |||||||| |||||||||| || || || ||||||||||||| ||||||||| ||||| ||||    
T  112547 cgactgaccatctgtctacggatgatacgccgaactcaacttcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagtaaacc 112641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 10311 - 10413
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  10311 gttctctccgactgaccatctgtttgcggatgataagccgaactcaacctcaacttagaacccaaggcatcttgaaaactcttccaaaatcttgaagtga 10410  T
Q  275 acc 277  Q
    |||    
T  10411 acc 10413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 1e-41; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 21890726 - 21890624
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  21890726 gttctctctgactgaccatctgtttgcggatgataagccgaactcaacctcaacttagaacccaaggcatcttgcaaactcttccaaaatcttgaagtga 21890627  T
Q  275 acc 277  Q
    |||    
T  21890626 acc 21890624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 24716490 - 24716391
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || ||||| |||||| |||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||||||||    
T  24716490 ctctccgactgaccatctgtctgaggatgctaagccgaactcaacctcaacttcgatcccaaagcatcttgcaaactcttccagaatcttgaagtgaacc 24716391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 22235884 - 22235785
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||||||||    
T  22235884 ctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaactttgaacccaaagcgtcttgcaaactcttccagaatctagaagtgaacc 22235785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 24620259 - 24620160
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || ||||| |||| | |||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||||||||    
T  24620259 ctctccgactgaccatctgtctgaggatgctaagtcgaactcaacctcaacttcgatcccaaagcatcttgcaaactcttccagaatcttgaagtgaacc 24620160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 21496559 - 21496661
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||| ||||||||||| |||||| |||||||||| |||||||||| |||||||| |||| ||||| ||||||||||| ||||||||| |||||||    
T  21496559 gttctctcctactgaccatctatttgcgaatgataagccgaactcaaccttaacttagaacccagggcattttgcaaactcttccaaaatctagaagtga 21496658  T
Q  275 acc 277  Q
    |||    
T  21496659 acc 21496661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 24749518 - 24749419
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| |  ||||| |||| | |||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||||||||    
T  24749518 ctctccgactgaccatctgtctaaggatgctaagtcgaactcaacctcaacttcgatcccaaagcatcttgcaaactcttccagaatcttgaagtgaacc 24749419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 23574164 - 23574258
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||| ||||| || ||||||||||||| ||||||||| |||||    
T  23574164 ctctccgactgaccatctgtctgcggatgatacgccgaactcaatctcaacttagaacccaaagcctcttgcaaactcttccaaaatctagaagt 23574258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 21563936 - 21563843
Alignment:
Q  179 tctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||||| || ||||||||||| | ||||||||| |||||    
T  21563936 tctccgactgaccatatgtttgcggatgataagctgaactcaacctcaacttagaacccaacgcctcttgcaaacttttccaaaatctagaagt 21563843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 21831720 - 21831631
Alignment:
Q  183 cgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||||| | ||||||||| |||||    
T  21831720 cgactgaccatgtgtttgcggatgataagccgaactcaacctcaacttagaacccaacgcctcttgcaaacttttccaaaatctagaagt 21831631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 20342686 - 20342785
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || ||||||| ||| || || ||||||||||    
T  20342686 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtaaactcttccagaacctagaagtgaacc 20342785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 18776192 - 18776286
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||| |||||||| || || ||||| ||||||||||||| ||||||||| |||||    
T  18776192 ctctctgactgaccatctgtctgcggatgataagccgaactcaatctcaacttcgaacctaaggcctcttgcaaactcttccaaaatctagaagt 18776286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 25848476 - 25848578
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || ||| ||| ||| || || |||||||    
T  25848476 gttctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtaaattcttccagaacctagaagtga 25848575  T
Q  275 acc 277  Q
    |||    
T  25848576 acc 25848578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 27685364 - 27685270
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  27685364 ctctccgactgaccatctgtttgtggatgatacgccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 27685270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 37291460 - 37291366
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  37291460 ctctccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 37291366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 992 - 919
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaa 251  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||||| |||||||||||    
T  992 ctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaacttcgaacccaaagcatcttgcaa 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 40709199 - 40709296
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  40709199 gttctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 40709296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 22462359 - 22462455
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||| ||||||||||||||| |||||||  |||| || || ||||| |||||||| ||||||| ||||||||||||||| ||||    
T  22462359 tccgactgaccatctgtctgcggatgataagccgaactcaatttcaatttcgaacccaacgcatcttgtaaactcttccaaaatcttgaagtaaacc 22462455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 21339250 - 21339151
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||| ||| ||||||||||||||||||| || ||  | ||||||||||||| ||||||||| ||||| ||||    
T  21339250 ctctccgactgaccatctgtctgtggatgatacgccgaactcaacctcaacttagaacctaaaacctcttgcaaactcttccaaaatctagaagtaaacc 21339151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 16356924 - 16357018
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  16356924 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 16357018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 19770382 - 19770476
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  19770382 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 19770476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 22135090 - 22135184
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||| | ||||||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  22135090 ctctccgactgaccatctatctgcggatgatacgccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 22135184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 22332851 - 22332757
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||| | ||||||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  22332851 ctctccgactgaccatctttctgcggatgatatgccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 22332757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 23516963 - 23517057
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||| |||||  | |||||||||||||  |||||||| |||||    
T  23516963 ctctccgactgaccatctgtctgcggatgatacgccgaactcaatctcaacttagaacccaaaccctcttgcaaactctttcaaaatctagaagt 23517057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 27668454 - 27668360
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  27668454 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 27668360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 34566916 - 34567010
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  34566916 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 34567010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 23471649 - 23471750
Alignment:
Q  176 ttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaa 275  Q
    |||||||||||||||||||||| | ||||||||| ||| |||| |||||||||||||| || || || |||| |||||||| ||||||||| ||||| ||    
T  23471649 ttctctccgactgaccatctgtctacggatgatacgcctaactaaacctcaacttagaacctaaagcctctttcaaactcttccaaaatctagaagtaaa 23471748  T
Q  276 cc 277  Q
    ||    
T  23471749 cc 23471750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 20799182 - 20799270
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    ||||||||||||||||||||  |||||| ||||||||||||||| ||||||||||| |||||  | ||||||||||| | |||||||||    
T  20799182 ctctccgactgaccatctgtccgcggataataagccaaactcaatctcaacttagaacccaaaacctcttgcaaacttttccaaaatct 20799270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 23440645 - 23440741
Alignment:
Q  176 ttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||||| |||||||||||  || ||||||| ||||||||||| ||||| || ||||||||||| | |||||| || |||||    
T  23440645 ttctctccgactgaccatctgtctgcggatgatacaccgaactcaatctcaacttagaacccaaagcctcttgcaaacttttccaaaacctagaagt 23440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 20821857 - 20821956
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||||| || || ||||| || || || ||||||  ||||||||||||||| ||||    
T  20821857 ctctccgactgaccatcagtctgcggatgataagccgaactcaacctcaattttgaacccaacgcgtcctgtaaactcctccaaaatcttgaagtaaacc 20821956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 22503083 - 22503182
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  22503083 ctctccgactgaccatctgtttgaggatgataagccgaactcaatctcaacttcgaacccaatgcgtcctgtaaactcttccagaacctagaagtgaacc 22503182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 25423619 - 25423710
Alignment:
Q  186 ctgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| ||||| ||||    
T  25423619 ctgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagtaaacc 25423710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 14999703 - 14999609
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||| |||||| |||||||| ||| |||||||||||||||| || |||||  | ||||||||||| | ||||||||| |||||    
T  14999703 ctctccgactgaccatatgtttgtggatgatacgccgaactcaacctcaacttcgaacccaaaacctcttgcaaacttttccaaaatctagaagt 14999609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 27518829 - 27518923
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| | | ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  27518829 ctctccgactgaccatctgtctgtggatgatacgtcgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 27518923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 27610776 - 27610870
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || ||||||||  || ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  27610776 ctctccgactgaccatctgtctgtggatgatacaccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 27610870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 29476037 - 29475943
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||  |||||||||||||||| || ||| | || ||||||||||| | ||||||||| |||||    
T  29476037 ctctccgactgaccatctgtctgcggatgatacgctgaactcaacctcaacttcgaaccccaagcctcttgcaaacttttccaaaatctagaagt 29475943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 41771264 - 41771358
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| || ||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  41771264 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctgaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 41771358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 20468054 - 20467961
Alignment:
Q  184 gactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||| |||||||| ||||||| ||| ||| ||||||||||||||||||| || || || ||||||||||||| ||||||||| ||||| ||||    
T  20468054 gactggccatctgtctgcggataatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagtaaacc 20467961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 37545460 - 37545396
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggc 242  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||| || ||||||||    
T  37545460 ctctccgactgaccatctgtttgaggatgataagccgaactcaacttcaacttcgaacccaaggc 37545396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 14886955 - 14886856
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||| || ||||| || || || ||||| | ||| || || ||||||||||    
T  14886955 ctctccgactgaccatctgtttgaggatgataagccgaactcaacttcaactttgaacccaaagcgtcctgtaaacttttccagaacctagaagtgaacc 14886856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 22381603 - 22381702
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||  |  |||||||||||| |||||||||||||||| || ||||| ||||| |||||||||| ||| || || || |||||||    
T  22381603 ctctccgactgaccatctgcctaaggatgataagccgaactcaacctcaacttcgaacccaaagcatcctgcaaactcttccagaacctagaggtgaacc 22381702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 23080053 - 23079954
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||| ||||||||| || |||||||||||| ||||||||||||||||  | ||||| ||||| |||||||||| ||| || || || |||||||    
T  23080053 ctctccgactaaccatctgtctgaggatgataagccgaactcaacctcaacttcaaacccaaagcatcctgcaaactcttccagaacctagaggtgaacc 23079954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 265
Target Start/End: Complemental strand, 21498003 - 21497913
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatc 265  Q
    |||||||||| |||||||||| | ||||||||||| ||| ||||||||||||||||||| || || || ||||||||| | | ||||||||    
T  21498003 gttctctccggctgaccatctatctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaaattttccaaaatc 21497913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 22348845 - 22348939
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||  ||| || ||||| || ||||||||||| | ||||||||| |||||    
T  22348845 ctctccgactgaccatctgtctgtggatgataagccgaactcaatctctgcttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 22348939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 26738672 - 26738614
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttaga 233  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||||||    
T  26738672 gttctctccgactgaccatctgtctgcggatgatatgccgaactcaatctcaacttaga 26738614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 21502217 - 21502277
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  21502217 ttgctgtttgtttattaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 21502277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 24798358 - 24798262
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||  || || |||||||| || || ||||||| ||| || || ||||||||||    
T  24798358 tccgactgaccatctgtttgaggatgataagccgaactcaacttcagtttcgaccccaaggcgtcctgtaaactcttccagaacctagaagtgaacc 24798262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 263
Target Start/End: Original strand, 27011488 - 27011573
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||||| ||| ||||| || || ||||| ||||| |||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  27011488 ctctccgtctgcccatcggtctgaggatggtaagcaaaactcaatctcaacttagttcccaaagcaacttgcaaactctcccaaaa 27011573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 14613745 - 14613701
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacagttctc 180  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||    
T  14613745 acataataaaataattaaataaataactagggcgttacagttctc 14613701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 28916377 - 28916301
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaact 254  Q
    ||||||||||||||||| || ||||||||||||||  |||||||  |||| || |||||||| |||||||| |||||    
T  28916377 ctctccgactgaccatcagtctgcggatgataagctgaactcaatttcaatttcgatcccaacgcatcttgtaaact 28916301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 28923732 - 28923656
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaact 254  Q
    ||||||||||||||||| || ||||||||||||||  |||||||  |||| || |||||||| |||||||| |||||    
T  28923732 ctctccgactgaccatcagtctgcggatgataagctgaactcaatttcaatttcgatcccaacgcatcttgtaaact 28923656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 20774163 - 20774262
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||| || ||||||||||||||  |||||||  |||| || || ||||| |||||||| |||||   ||||||||| ||||| ||||    
T  20774163 ctctccgactgaccatcagtctgcggatgataagctgaactcaatttcaatttcgaacccaacgcatcttgtaaacttctccaaaatctcgaagtaaacc 20774262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 5455814 - 5455855
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacagtt 177  Q
    ||||| ||||||||||||||||||| ||||||||||||||||    
T  5455814 acataataaaataattaaataaataactagggcgttacagtt 5455855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 18893805 - 18893764
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacagtt 177  Q
    ||||| ||||||||||||||||||| ||||||||||||||||    
T  18893805 acataataaaataattaaataaataactagggcgttacagtt 18893764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 26012096 - 26012141
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttga 326  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||    
T  26012096 ttgctgtttgtttattaactaagctgcatgagtcggtctaagttga 26012141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 21329558 - 21329618
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    ||||||||||||  |||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  21329558 ttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 21329618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 28894906 - 28894830
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaact 254  Q
    ||||||||||||||||| || ||||||||||||||  |||||||  |||| || ||||||||  ||||||| |||||    
T  28894906 ctctccgactgaccatcagtctgcggatgataagctgaactcaatttcaatttcgatcccaacacatcttgtaaact 28894830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 5581084 - 5581046
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  5581084 acataataaaataattaaataaataactagggcgttaca 5581046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 17937692 - 17937654
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  17937692 acataataaaataattaaataaataactagggcgttaca 17937654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 19566657 - 19566575
Alignment:
Q  174 agttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactct 256  Q
    ||||||||| || ||||| ||  |||| ||||||||||| ||| ||||||| ||||||| |||||| ||  ||||||||||||    
T  19566657 agttctctctgaatgaccgtccatttgaggatgataagcaaaaatcaaccttaacttagttcccaaagctgcttgcaaactct 19566575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 24794521 - 24794483
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  24794521 acataataaaataattaaataaataactagggcgttaca 24794483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 24799186 - 24799148
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  24799186 acataataaaataattaaataaataactagggcgttaca 24799148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 21937128 - 21937067
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  21937128 ggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 21937067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 7506826 - 7506794
Alignment:
Q  142 taaaataattaaataaatagctagggcgttaca 174  Q
    ||||||||||||||||||| |||||||||||||    
T  7506826 taaaataattaaataaataactagggcgttaca 7506794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 38015014 - 38015046
Alignment:
Q  142 taaaataattaaataaatagctagggcgttaca 174  Q
    ||||||||||||||||||| |||||||||||||    
T  38015014 taaaataattaaataaataactagggcgttaca 38015046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 387 - 489
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||    
T  387 gttctctccgactgaccatctgtttgtggatgataagccgaactcaacctcaactttgaacccaaggcatcttgcaaactcttccaaaatcttgaagtga 486  T
Q  275 acc 277  Q
    |||    
T  487 acc 489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 3e-39; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 15003149 - 15003047
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||| |||||||||||||||| |||||||||||||||||    
T  15003149 gttctctccgactgaccatctgtttgcggatgataagccgaactcaacctcaactttgaacccaatgcatcttgcaaactcttccaaaatcttgaagtga 15003050  T
Q  275 acc 277  Q
    |||    
T  15003049 acc 15003047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 15078122 - 15078224
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||||||||| |    
T  15078122 gttctcttcgactgaccatttgtttgcggatgataagccgaactcaacctcaactttgaacccaaggcatcttgcaaactcttccaaaatcttgaagtaa 15078221  T
Q  275 acc 277  Q
    |||    
T  15078222 acc 15078224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 15246411 - 15246513
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| || |||||||||| | |||||||||||||||| || |||||||||||||||||||||| ||||||||| |||||||    
T  15246411 gttctctccgactgaccatctgtctggggatgataagtcgaactcaacctcaacttcgaacccaaggcatcttgcaaactcttccaaaatctagaagtga 15246510  T
Q  275 acc 277  Q
    |||    
T  15246511 acc 15246513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 15319640 - 15319740
Alignment:
Q  177 tctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaac 276  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||| || |||||||| ||||| ||||||| |||||| ||||||||||||    
T  15319640 tctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaactttgaacccaaggcctcttgtaaactcttccaaaaccttgaagtgaac 15319739  T
Q  277 c 277  Q
    |    
T  15319740 c 15319740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 8706408 - 8706502
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||| || ||||||||||| | ||||||||| |||||    
T  8706408 ctctccgactgaccatctgtttgcggatgataagccgaactcaacctcaacttagaactcaacgcctcttgcaaacttttccaaaatctagaagt 8706502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 14850890 - 14850789
Alignment:
Q  176 ttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaa 275  Q
    |||| ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||||| ||||||||| ||||| ||    
T  14850890 ttctttccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagtaaa 14850791  T
Q  276 cc 277  Q
    ||    
T  14850790 cc 14850789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 27900876 - 27900977
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| | ||||||||||||  ||||||||||||| || || ||||| |||||||| ||||||| ||||||||||||||| ||||    
T  27900876 ctctccgactgaccatctgtctacggatgataagctgaactcaacctcaattttgaacccaatgcatcttgtaaactcttccaaaatcttgaagtaaacc 27900975  T
Q  278 cc 279  Q
    ||    
T  27900976 cc 27900977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 1649059 - 1648960
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| || || |||||||||| | ||||||| ||||||||||    
T  1649059 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgcaaactcttctaaaatctggaagtgaacc 1648960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 15358872 - 15358773
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||| | || |||||||||| | |||||||||||||||| || ||||| |||||||||| ||||| || |||||||||||||||||    
T  15358872 ctctccgactgaccatctctctgaggatgataagtcgaactcaacctcaacttcgaacccaatgcatcttgcagactcttcccaaatcttgaagtgaacc 15358773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 14691389 - 14691491
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||| ||||||||||||||||| ||||||||||| ||| |||| |||||||||||||| || || || ||||||||||||| ||||||||| ||||| |    
T  14691389 gttctttccgactgaccatctgtctgcggatgatacgccgaacttaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagtaa 14691488  T
Q  275 acc 277  Q
    |||    
T  14691489 acc 14691491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 16354967 - 16354873
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||  ||||||||||| ||| ||||||| ||||||||||| ||||| || ||||||||||||| ||||||||| |||||    
T  16354967 ctctccgactgaccatctgcctgcggatgatacgccgaactcaatctcaacttagaacccaaagcctcttgcaaactcttccaaaatctagaagt 16354873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 272
Target Start/End: Complemental strand, 1639950 - 1639853
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| ||||||| ||||||||| ||||||||||| ||||||||| |||||||||| || ||||| || ||||||||||||| ||||||||| |||||    
T  1639950 gttctttccgactaaccatctgtctgcggatgatacgccaaactccacctcaacttcgaacccaaagcctcttgcaaactcttccaaaatctagaagt 1639853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 15147406 - 15147318
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    |||||||||||||||||||| ||||||||||| | | ||||||| ||||||||||| ||||| || ||||||||||||| |||||||||    
T  15147406 ctctccgactgaccatctgtctgcggatgatacgtcgaactcaatctcaacttagaacccaaagcctcttgcaaactcttccaaaatct 15147318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 11207013 - 11206914
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || ||||||| | | || || ||||||||||    
T  11207013 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtaaactcttcaagaacctagaagtgaacc 11206914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 15414811 - 15414720
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    |||||||||||||| | |||||||||||||||||||||  |||||||||||||||| || ||||| || ||||||||||| | |||||||||    
T  15414811 gttctctccgactggctatctgtttgcggatgataagctgaactcaacctcaactttgaacccaacgcctcttgcaaacttttccaaaatct 15414720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 29453319 - 29453220
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || ||||| | ||| || || ||||||||||    
T  29453319 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtaaacttttccagaacctagaagtgaacc 29453220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 33223413 - 33223512
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| ||||| || ||||||| ||| || || ||||||||||    
T  33223413 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaacccaaagcatcctgtaaactcttccagaacctagaagtgaacc 33223512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 44661648 - 44661549
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||| |||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || ||||||| ||| || || ||||||||||    
T  44661648 ctcttcgactgaccatctgtttgaggatgataagccgaactcaacctcaactttgaacccaaggcgtcctgtaaactcttccagaacctagaagtgaacc 44661549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 8053145 - 8053051
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  8053145 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 8053051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 8386902 - 8386996
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  8386902 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 8386996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 12477090 - 12477184
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  12477090 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 12477184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 12524166 - 12524260
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  12524166 ctctccgactgaccatctgtttgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 12524260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 14303500 - 14303406
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||| ||||||||| ||||||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  14303500 ctctccgactaaccatctgtctgcggatgatatgccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 14303406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 14681057 - 14681151
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  14681057 ctctccgactgaccatctgtctgtggatgataagccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 14681151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 19778315 - 19778221
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  19778315 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 19778221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 27711826 - 27711920
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||| ||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  27711826 ctctccgactgaccatctgtctgcagatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 27711920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 29038926 - 29038832
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  29038926 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 29038832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 18297692 - 18297789
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | || |||||| |||||    
T  18297692 gttctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccgaaatctagaagt 18297789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 3264576 - 3264477
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||| || |||||||| || || ||||| | ||| || || ||||||||||    
T  3264576 ctctccgactgaccatctgtttgaggatgataagccgaactcaacttcaacttcgaacccaaggcgtcctgtaaacttttccagaacctagaagtgaacc 3264477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 20891472 - 20891571
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||| | |||||||||||||||| || ||||| ||||| || ||||||| ||| || || ||||||||||    
T  20891472 ctctccgactgaccatctgtctgaggatgataagtcgaactcaacctcaacttcgaacccaaagcatcctgtaaactcttccagaacctagaagtgaacc 20891571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 16251967 - 16251873
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| |||||||||||||| |||| |||||||||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  16251967 ctctctgactgaccatctgtctgcgaatgataagccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 16251873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 23956237 - 23956331
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| |||| || |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  23956237 ctctccgactgaccatctgtctgtggatgatacgccgaacttaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 23956331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 40473530 - 40473624
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||  | ||||| || ||||||||||| | ||||||||| |||||    
T  40473530 ctctccgactgaccatctgtttgtggatgatacgccgaactcaatctcaacttcaaacccaaagcctcttgcaaacttttccaaaatctagaagt 40473624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 14159970 - 14160054
Alignment:
Q  188 gaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||| || |||||||| ||| ||||||||||||||||||| || || || ||||||||||||| ||||||||| |||||    
T  14159970 gaccatctgtctgtggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagt 14160054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 23434764 - 23434721
Alignment:
Q  132 ctctacatagtaaaataattaaataaatagctagggcgttacag 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23434764 ctctacatagtaaaataattaaataaatagctagggcgttacag 23434721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 7090922 - 7091016
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||| |||||| ||||||||||| ||  ||||||||||||||||||| || || || ||||||||||| | | ||||||| |||||    
T  7090922 ctctccgactgactatctgtctgcggatgatatgctgaactcaacctcaacttagaacctaaagcctcttgcaaacttttctaaaatctagaagt 7091016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 18226968 - 18226874
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| |||||||||||||| | ||||||||||||| ||||||| |||||||| || || || || ||||||||||||  ||||||||| |||||    
T  18226968 ctctctgactgaccatctgtctacggatgataagccgaactcaatctcaacttcgaacctaaagcctcttgcaaactcctccaaaatctagaagt 18226874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 12342645 - 12342546
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||| ||| ||||| || || |||||||||||  |||||||||| ||||||| |||||| ||| |||||||||||| ||||||| | ||||| ||||    
T  12342645 ctctccgtctgcccatcagtatggggatgataagcataactcaaccttaacttagttcccaaagcagcttgcaaactctcccaaaatttagaagtaaacc 12342546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 16146404 - 16146456
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaactt 230  Q
    |||| ||||||||||||||| || |||||||||||| ||||||||| ||||||    
T  16146404 ctcttcgactgaccatctgtctgaggatgataagccgaactcaaccccaactt 16146456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 13248135 - 13248213
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactct 256  Q
    ||||||| ||| ||||| || || ||||| |||||  ||||||| |||||||||| |||||| ||| ||||||||||||    
T  13248135 ctctccgtctgcccatcggtctgaggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactct 13248213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 17667775 - 17667809
Alignment:
Q  142 taaaataattaaataaatagctagggcgttacagt 176  Q
    ||||||||||||||||||| |||||||||||||||    
T  17667775 taaaataattaaataaataactagggcgttacagt 17667809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 13912 - 13953
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  13912 ttgctgtttgtttattaactaagctgcatgagtcggtctaag 13953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 263
Target Start/End: Original strand, 9291325 - 9291410
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||||| ||| ||||| || || ||||| |||||   |||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  9291325 ctctccgtctgtccatcggtctgaggatggtaagcagtactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 9291410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 15292915 - 15292854
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  15292915 ggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 15292854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 46640517 - 46640558
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  46640517 ttgctgtttgtttattaactaagctgcatgagtcggtctaag 46640558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 53082213 - 53082254
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  53082213 ttgctgtttgtttattaactaagctgcatgagtcggtctaag 53082254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 392468 - 392512
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacagttctc 180  Q
    ||||| |||||||||||||||||||  ||||||||||||| ||||    
T  392468 acataataaaataattaaataaataattagggcgttacagatctc 392512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 9849224 - 9849176
Alignment:
Q  215 aactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||||||||||||||| | |||||| || ||||||||||||| ||||||    
T  9849224 aactcaacctcaacttcgttcccaacgcttcttgcaaactctcccaaaa 9849176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 14266421 - 14266369
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaactt 230  Q
    |||||||||||||||||| | || |||||||| ||| ||||||| ||||||||    
T  14266421 ctctccgactgaccatctatctgtggatgatacgccgaactcaatctcaactt 14266369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 35147964 - 35147924
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacagt 176  Q
    ||||| |||||||||||||||||||  ||||||||||||||    
T  35147964 acataataaaataattaaataaataattagggcgttacagt 35147924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 39706353 - 39706409
Alignment:
Q  285 tgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    ||||||||  |||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  39706353 tgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 39706409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 79; Significance: 7e-37; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 937 - 835
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||| || |||||||||||||||||||||| |||||| ||||||||||    
T  937 gttctctccgactgaccatctgtttgcggacgataagccgaactcaacctcaactttgaacccaaggcatcttgcaaactcttccaaaaccttgaagtga 838  T
Q  275 acc 277  Q
    |||    
T  837 acc 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 28040 - 28139
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||||| ||||||||||||| |||||||||  |||||||||    
T  28040 ctctccgactgaccatctgtctgcggatgataagccgaactcagcctcaacttcgatcccaaggcgtcttgcaaactcttccaaaatctataagtgaacc 28139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 34293 - 34392
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||||| ||||||||||||| |||||||||  |||||||||    
T  34293 ctctccgactgaccatctgtctgcggatgataagccgaactcagcctcaacttcgatcccaaggcgtcttgcaaactcttccaaaatctataagtgaacc 34392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 7e-37; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 19147688 - 19147790
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||    
T  19147688 gttctctccgactgaccatctgtttgcggatgataagttgaactcaacctcatcttagaacccaaggcatcttgcaaactcttccaaaatcttgaagtga 19147787  T
Q  275 acc 277  Q
    |||    
T  19147788 acc 19147790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 20747087 - 20747189
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||    
T  20747087 gttctctccgactgaccatctgtttgcggatgataagttgaactcaacctcatcttagaacccaaggcatcttgcaaactcttccaaaatcttgaagtga 20747186  T
Q  275 acc 277  Q
    |||    
T  20747187 acc 20747189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 15102372 - 15102273
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||    
T  15102372 ctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaacttcgaacccaaggcatcttgcaaactcttccaaaatctagaagtgaacc 15102273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 14264016 - 14263914
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || ||||| |||||||||||||||| ||||||||| |||||||    
T  14264016 gttctctccgactgaccatctgtttgcggatgataagccgaactcaaccttaactttgaacccaatgcatcttgcaaactcttccaaaatctagaagtga 14263917  T
Q  275 acc 277  Q
    |||    
T  14263916 acc 14263914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 6413991 - 6414090
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||| ||||| || |||||||||||| |||||||||||||||| || || || |||||||||||||||| ||||||||||||||||||||    
T  6413991 ctctccgactgaccttctgtctgaggatgataagccgaactcaacctcaacttcgaacctaaagcatcttgcaaactcttccaaaatcttgaagtgaacc 6414090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 16072063 - 16071964
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| ||||| || ||||| |||||||||||||||| ||||||||| ||| ||||||    
T  16072063 ctctctgactgaccatctgtttgcggatgataagccgaactcaaccttaactttgaacccaatgcatcttgcaaactcttccaaaatctagaactgaacc 16071964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 16950240 - 16950141
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || ||||||||| || |||||||||||||||| |||||||| |||||||||||||||| ||| ||||| ||||||||||    
T  16950240 ctctccgactgaccatctgtctgaggatgataatccgaactcaacctcaacttcgatcccaaagcatcttgcaaactcttccagaatctagaagtgaacc 16950141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 15625028 - 15625130
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||  | ||||||||||||| ||||||||| ||||| |    
T  15625028 gttctttccgactgaccatctgtttgcggatgatacgccgaactcaacctcaacttagaacccaaaacctcttgcaaactcttccaaaatctagaagtaa 15625127  T
Q  275 acc 277  Q
    |||    
T  15625128 acc 15625130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 11306029 - 11305933
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || ||||||| ||||||||| ||||||||||    
T  11306029 tccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtaaactcttccaaaatctagaagtgaacc 11305933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 12206572 - 12206481
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| || ||||| || ||||||||||| | |||||||||    
T  12206572 gttctctccgactgaccatctgtttgcggatgataagctgaactcaacctcaactttgaacccaacgcctcttgcaaacttttccaaaatct 12206481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 1173 - 1077
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||| ||||||||| || |||||||||||| |||||||||||||| | |||||||| |||||||||||||||| ||| ||||| ||||||||||    
T  1173 tccgactaaccatctgtctgaggatgataagccgaactcaacctcaacctcgatcccaaagcatcttgcaaactcttccagaatctagaagtgaacc 1077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 11388197 - 11388098
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||| |||||| || || ||||| |||||||||||||||| ||| ||||| ||||||||||    
T  11388197 ctctccgactgaccatctgtctgaggatgataagccgaactcagcctcaatttcgaacccaaagcatcttgcaaactcttccagaatctagaagtgaacc 11388098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 13666017 - 13666116
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||||||||||| || ||||| |||||||| || |||| ||| ||||| ||||||||||    
T  13666017 ctctctgactgaccatctgtctgcggatgataagccgaactcaacctcaacttcgaacccaatgcatcttgtaagctcttccagaatctagaagtgaacc 13666116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 13968437 - 13968338
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || ||||||| ||| || || ||||||||||    
T  13968437 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtaaactcttccagaacctagaagtgaacc 13968338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 8708084 - 8708178
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||||||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  8708084 ctctccgactgaccatctgtctgtggatgatacgccaaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 8708178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 11237004 - 11236910
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  11237004 ctctccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 11236910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 13686543 - 13686637
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  13686543 ctctccgactgaccatctgtttgtggatgatacgccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 13686637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 15160848 - 15160754
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  15160848 ctctccgactgaccatctgtttgtggatgatacgccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 15160754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 13021837 - 13021913
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaact 254  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||||||||| |||||||| ||||||||||||||    
T  13021837 ctctccgactaaccatctgtctgaggatgataagccgaactcaacctcaacttcgatcccaaagcatcttgcaaact 13021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 8211897 - 8211798
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| || |||||||| ||||| ||||| | ||| || || ||||||||||    
T  8211897 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcttgtaaacttttccagaacctagaagtgaacc 8211798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 12456182 - 12456281
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| | |||||||||||||| |||||||| |||||||| ||| ||| ||| || || ||||||||||    
T  12456182 ctctccgactgaccatctgtctggggatgataagccgagctcaacctcaacttcgatcccaaagcatcttgtaaattcttccagaacctagaagtgaacc 12456281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 26118374 - 26118275
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || |||| || ||| || || ||||||||||    
T  26118374 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtaaacgcttccagaacctagaagtgaacc 26118275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 17107 - 17013
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||| |||||||| || || || || ||||||||||||| ||||||||| |||||    
T  17107 ctctccaactgaccatctgtctgcggatgataagccgaactcaatctcaacttcgaacctaaagcctcttgcaaactcttccaaaatctagaagt 17013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 8199107 - 8199201
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  8199107 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 8199201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 9596536 - 9596630
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||||| || || ||||| || ||||||||||| | ||||||||| |||||    
T  9596536 ctctccgactgaccatctgtctgcggatgataagccgaactcaatctcaatttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 9596630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 10871474 - 10871568
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  10871474 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 10871568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 12687980 - 12688074
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  12687980 ctctccgactgaccatctgtctgtggatgataagccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 12688074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 14332876 - 14332970
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  14332876 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 14332970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 18551549 - 18551455
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  18551549 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 18551455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 44791142 - 44791048
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  44791142 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 44791048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 175 - 275
Target Start/End: Complemental strand, 15154451 - 15154351
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||| ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || |  |||||||| | ||||||||| |||||||    
T  15154451 gttctttccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctgctgcaaacttttccaaaatctagaagtga 15154352  T
Q  275 a 275  Q
    |    
T  15154351 a 15154351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 18178221 - 18178309
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | |||||||||    
T  18178221 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatct 18178309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 14286145 - 14286046
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||| ||||||||||||||| || |||||||||||| ||||||||||||| || || ||||| ||||||||||| |||| || |||||| || |||||||    
T  14286145 ctcttcgactgaccatctgtctgaggatgataagccgaactcaacctcaattttgaacccaaagcatcttgcaagctcttccgaaatctagatgtgaacc 14286046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 14434171 - 14434270
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||| || | ||| ||||| |||||||||| ||| || || || |||||||    
T  14434171 ctctccgactgaccatctgtttgaggatgataagccgaactcaatctcaacttcgaactcaaagcatcctgcaaactcttccagaacctagaggtgaacc 14434270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 11772029 - 11771933
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||| ||||||||| ||| ||||||| ||| ||||||||||||||||||| || || || ||||||||||||  ||||||||| ||||| ||||    
T  11772029 tccgactaaccatctgtctgcagatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaactcctccaaaatctagaagtaaacc 11771933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 14130353 - 14130452
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||||||| || | ||| ||||| |||||||||| ||| || || || |||||||    
T  14130353 ctctccgactgaccatctgtctgaggatgataagccgaactcaatctcaacttcgaactcaaagcatcctgcaaactcttccagaacctagaggtgaacc 14130452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 2025045 - 2025003
Alignment:
Q  132 ctctacatagtaaaataattaaataaatagctagggcgttaca 174  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2025045 ctctacatagtaaaataattaaataaatagctagggcgttaca 2025003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 14040172 - 14040230
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttaga 233  Q
    ||||||||||||||||||||||| || |||||||| ||| |||||||||||||||||||    
T  14040172 gttctctccgactgaccatctgtctgtggatgatacgccgaactcaacctcaacttaga 14040230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 14350202 - 14350260
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttaga 233  Q
    ||||||||||||||||||||||| || |||||||| ||| |||||||||||||||||||    
T  14350202 gttctctccgactgaccatctgtctgtggatgatacgccgaactcaacctcaacttaga 14350260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 14955099 - 14955175
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaact 254  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||||||| || ||||| || | |||||||||    
T  14955099 ctctccgactgaccatctgtctgtggatgataagccgaactcaatctcaacttcgaacccaaagcctgttgcaaact 14955175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 15340914 - 15341010
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||| || |||||||||||| |||||| ||||||||| || ||||| || || |||||||||| ||| || || || |||||||    
T  15340914 tccgactgaccatctgtctgaggatgataagccgaactcatcctcaacttcgaacccaaagcgtcctgcaaactcttccagaacctagatgtgaacc 15341010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 18053722 - 18053623
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| ||||||  |||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  18053722 ctctccgactgaccatctgtctgaggatgataagccgaactcagtctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 18053623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 23199512 - 23199413
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| ||||||  |||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  23199512 ctctccgactgaccatctgtctgaggatgataagccgaactcagtctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 23199413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 23505639 - 23505540
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| ||||||  |||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  23505639 ctctccgactgaccatctgtctgaggatgataagccgaactcagtctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 23505540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 49152781 - 49152880
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||| ||||||| || ||||| || || || ||||| | ||| || || ||||||||||    
T  49152781 ctctccgactgaccatccgtttgaggatgataagccgaactcaacttcaactttgaacccaaagcgtcctgtaaacttttccagaacctagaagtgaacc 49152880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 21662452 - 21662534
Alignment:
Q  190 ccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||| ||||||||||| ||| ||||||| ||||||||||| ||||| || || | |||||||| ||||||||| |||||    
T  21662452 ccatctgtctgcggatgatacgcctaactcaaactcaacttagaacccaacgcctcctacaaactcttccaaaatctagaagt 21662534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 271
Target Start/End: Complemental strand, 11552893 - 11552800
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaag 271  Q
    ||||||||||| |||||| | || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| ||||    
T  11552893 ctctccgactgtccatctatctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaag 11552800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 4440431 - 4440492
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||||||||||  |||||||||||||||||| |||||| ||| |||||||||| | ||||||    
T  4440431 ggatgataagcagaactcaacctcaacttagttcccaaagcagcttgcaaactttcccaaaa 4440492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 67805 - 67745
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    ||||||||||||  |||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  67805 ttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 67745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 17924154 - 17924206
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaact 254  Q
    |||||||||||| |||||||||||||||||  |||||| ||| ||||||||||    
T  17924154 ggatgataagccgaactcaacctcaacttatttcccaaagcagcttgcaaact 17924206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 1319127 - 1319165
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  1319127 acataataaaataattaaataaataactagggcgttaca 1319165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 2282443 - 2282481
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  2282443 acataataaaataattaaataaataactagggcgttaca 2282481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 11298493 - 11298455
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  11298493 acataataaaataattaaataaataactagggcgttaca 11298455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 11306857 - 11306819
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  11306857 acataataaaataattaaataaataactagggcgttaca 11306819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 26088730 - 26088692
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  26088730 acataataaaataattaaataaataactagggcgttaca 26088692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 26112518 - 26112480
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  26112518 acataataaaataattaaataaataactagggcgttaca 26112480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 26119175 - 26119137
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  26119175 acataataaaataattaaataaataactagggcgttaca 26119137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 42059904 - 42059942
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  42059904 acataataaaataattaaataaataactagggcgttaca 42059942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 326
Target Start/End: Original strand, 2280184 - 2280225
Alignment:
Q  285 tgtttgtttattaactaagctatatgagtctgtctaagttga 326  Q
    |||||||||||||||||||||  ||||||| |||||||||||    
T  2280184 tgtttgtttattaactaagctgcatgagtcggtctaagttga 2280225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 11880422 - 11880463
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacagtt 177  Q
    ||||| ||||||||||||||||| | ||||||||||||||||    
T  11880422 acataataaaataattaaataaacaactagggcgttacagtt 11880463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 14044806 - 14044761
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttga 326  Q
    ||||| |||||||||||||||||||  ||||||| |||||||||||    
T  14044806 ttgctttttgtttattaactaagctgcatgagtcggtctaagttga 14044761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 14354836 - 14354791
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttga 326  Q
    ||||| |||||||||||||||||||  ||||||| |||||||||||    
T  14354836 ttgctttttgtttattaactaagctgcatgagtcggtctaagttga 14354791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 20220253 - 20220290
Alignment:
Q  285 tgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  20220253 tgtttgtttattaactaagctgtatgagtcggtctaag 20220290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 23203367 - 23203310
Alignment:
Q  215 aactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  23203367 aactcaatctcaacttcgaccccaaggcctcttgcaaacttttccaaaatctagaagt 23203310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 23509494 - 23509437
Alignment:
Q  215 aactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  23509494 aactcaatctcaacttcgaccccaaggcctcttgcaaacttttccaaaatctagaagt 23509437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 27107541 - 27107480
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  27107541 ggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 27107480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 40921711 - 40921679
Alignment:
Q  142 taaaataattaaataaatagctagggcgttaca 174  Q
    ||||||||||||||||||| |||||||||||||    
T  40921711 taaaataattaaataaataactagggcgttaca 40921679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 47831863 - 47831807
Alignment:
Q  285 tgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    ||||||||  |||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  47831863 tgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 47831807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 7e-37; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 22796562 - 22796460
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  22796562 gttctctccgactgaccatatgtttgcgaatgataagccgaactcaacctcaacttagaacccaatgcatcttgcaaactcttccaaaatcttgaagtga 22796463  T
Q  275 acc 277  Q
    |||    
T  22796462 acc 22796460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 174 - 277
Target Start/End: Original strand, 21471951 - 21472054
Alignment:
Q  174 agttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtg 273  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| || |||||||||||||||||||||| |||||| |||||||||    
T  21471951 agttctctcccactgaccatctgtttgcggatgataagccgaactcaatctcaactttgaacccaaggcatcttgcaaactcttccaaaaccttgaagtg 21472050  T
Q  274 aacc 277  Q
    ||||    
T  21472051 aacc 21472054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 21564059 - 21563960
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||| | |||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||    
T  21564059 ctctccgactgaccatctgtctgcggatgataagtcgaactcaacctcaacttcgaacccaaggcatcttgcaaactcttccaaaatcttgaagtgaacc 21563960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 21569918 - 21569819
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||| | |||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||    
T  21569918 ctctccgactgaccatctgtctgcggatgataagtcgaactcaacctcaacttcgaacccaaggcatcttgcaaactcttccaaaatcttgaagtgaacc 21569819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 19453774 - 19453873
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||| || |||||||    
T  19453774 ctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaacttcgaacccaaggcatcttgcaaactcttccaaaatctagaggtgaacc 19453873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 25768546 - 25768637
Alignment:
Q  179 tctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaa 270  Q
    ||||||||||||||||||| ||||||||||||||| ||||||| |||||||| || |||||||||||||| ||||||| |||||||||||||    
T  25768546 tctccgactgaccatctgtctgcggatgataagccgaactcaatctcaactttgaacccaaggcatcttggaaactcttccaaaatcttgaa 25768637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 8762860 - 8762761
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| ||||||||||| |||| ||| ||||| ||||||||||    
T  8762860 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaacccaatgcatcttgcaagctcttccagaatctagaagtgaacc 8762761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 14381394 - 14381295
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||  |||||||||||||||| || ||||| |||||||||||||||| ||| ||||| ||||||||||    
T  14381394 ctctccgactgaccatctgtctgaggatgataagctgaactcaacctcaacttcgaacccaaagcatcttgcaaactcttccagaatctagaagtgaacc 14381295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 17415840 - 17415939
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||| ||||||||||||||| ||||||||||||||| |||| ||||||||||| || ||||| ||||||||||| |||| ||||||||| ||||||||||    
T  17415840 ctcttcgactgaccatctgtctgcggatgataagccgaacttaacctcaacttcgaacccaatgcatcttgcaagctcttccaaaatctagaagtgaacc 17415939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 25609785 - 25609694
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||| || ||||||||||| | ||||||||| |||||    
T  25609785 tccgactgaccatctgtctgcggatgataagccgaactcaacctcaacttagaacccaaagcctcttgcaaacttttccaaaatctagaagt 25609694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 5839146 - 5839052
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||| ||||| || ||||||||||||| ||||||||| |||||    
T  5839146 ctctccgactgaccatctgtctgcggatgatacgccgaactcaatctcaacttagaacccaaagcctcttgcaaactcttccaaaatctagaagt 5839052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 264
Target Start/End: Original strand, 1641123 - 1641212
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaat 264  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||||| || ||||||||||| | |||||||    
T  1641123 gttctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaactttgaacccaacgcctcttgcaaacttttccaaaat 1641212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 19865044 - 19865135
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||| ||||| || ||||||||||||| ||||||||| |||||    
T  19865044 tccgactgaccatctgtctgcggatgatacgccgaactcaatctcaacttagaacccaaagcctcttgcaaactcttccaaaatctagaagt 19865135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 24364766 - 24364865
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || ||||||| ||| || || ||||||||||    
T  24364766 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtaaactcttccagaacctagaagtgaacc 24364865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 2874730 - 2874636
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  2874730 ctctccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 2874636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 34645513 - 34645414
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||| || ||||||||||||||  |||||||  |||| || |||||||| |||||||| ||||||| ||||||||||||||| ||||    
T  34645513 ctctccgactgaccatcagtctgcggatgataagctgaactcaatttcaatttcgatcccaacgcatcttgtaaactcttccaaaatcttgaagtaaacc 34645414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 1543011 - 1542917
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  1543011 ctctccgactgaccatctgtctgtggatgataagccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 1542917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 22078617 - 22078523
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||| ||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  22078617 ctctccgactaaccatctgtctgcggatgatacgccgaactcaacctcaacttagagcctaaagcctcttgcaaacttttccaaaatctagaagt 22078523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 24313095 - 24313001
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  24313095 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 24313001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 18407869 - 18407781
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    |||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||| | |||||||||    
T  18407869 ctctccgactgaccctctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatct 18407781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 10468776 - 10468677
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| ||||||||||||| || || ||||| ||||| || ||||||| |||||| || || |||||||    
T  10468776 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaatttcgaacccaaagcatcctgtaaactcttccaaaacctagaggtgaacc 10468677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 18795044 - 18795143
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||| |||||||| || || ||||||||||||||||||| |||||| || || ||||| ||||||||||||| || ||| ||||| ||||||||||    
T  18795044 ctctccgattgaccatccgtatgaggatgataagccaaactcagcctcaatttcgaacccaaagcatcttgcaaacgcttccataatctagaagtgaacc 18795143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 19879652 - 19879751
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||| ||||| |||||||| || |||||||||||| |||||| ||||||||| || ||||| |||||||||||||||| ||| ||||| || |||||||    
T  19879652 ctctctgactgtccatctgtctgaggatgataagccgaactcagcctcaacttcgagcccaaagcatcttgcaaactcttccagaatctagatgtgaacc 19879751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 16626644 - 16626550
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||| ||| || |||||||| ||||||||||| | ||||||||| |||||    
T  16626644 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcatctttgaacccaaggcctcttgcaaacttttccaaaatctagaagt 16626550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 16927567 - 16927473
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||||||||| |  || || || ||||||||||| | ||||||||| |||||    
T  16927567 ctctccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttggtacctaaagcctcttgcaaacttttccaaaatctagaagt 16927473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 25112906 - 25113000
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| |||| || |||||||| || ||||| || ||||||||||||| ||||||||| |||||    
T  25112906 ctctccgactgaccatctgtctgtggatgataggccgaacttaatctcaacttcgaacccaaagcctcttgcaaactcttccaaaatctagaagt 25113000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 27187790 - 27187884
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  27187790 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 27187884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 27261450 - 27261356
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  27261450 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 27261356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 27331360 - 27331266
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| ||| |||||||||| ||||||||||| ||| ||||||||||||||||||| | ||| || ||||||||||| | ||||||||| |||||    
T  27331360 ctctctgacagaccatctgtctgcggatgatacgccgaactcaacctcaacttagaactcaaagcctcttgcaaacttttccaaaatctagaagt 27331266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 27392100 - 27392006
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| ||| |||||||||| ||||||||||| ||| ||||||||||||||||||| | ||| || ||||||||||| | ||||||||| |||||    
T  27392100 ctctctgacagaccatctgtctgcggatgatacgccgaactcaacctcaacttagaactcaaagcctcttgcaaacttttccaaaatctagaagt 27392006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 27559918 - 27559816
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| || |||||||||||| |||||| ||||||||| || ||||| || || || ||||||| ||| || || |||||||    
T  27559918 gttctctccgactgaccatctgtctgaggatgataagccgaactcagcctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtga 27559819  T
Q  275 acc 277  Q
    |||    
T  27559818 acc 27559816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 27560547 - 27560445
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| || |||||||||||| |||||| ||||||||| || ||||| || || || ||||||| ||| || || |||||||    
T  27560547 gttctctccgactgaccatctgtctgaggatgataagccgaactcagcctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtga 27560448  T
Q  275 acc 277  Q
    |||    
T  27560447 acc 27560445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 28282743 - 28282641
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| || |||||||||||| |||||| ||||||||| || ||||| || || || ||||||| ||| || || |||||||    
T  28282743 gttctctccgactgaccatctgtctgaggatgataagccgaactcagcctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtga 28282644  T
Q  275 acc 277  Q
    |||    
T  28282643 acc 28282641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 28292299 - 28292205
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||| ||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  28292299 ctctccaactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 28292205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 29591847 - 29591753
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||  |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  29591847 ctctccgactgaccatctgtctgtggatgatacgccgaactcactctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 29591753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 15459690 - 15459789
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||| || ||||||||||||||| |||||||| |||| || || ||||| || || || ||||||  ||||||||||||||| ||||    
T  15459690 ctctccgactgaccatcagtctgcggatgataagccgaactcaacttcaattttgaacccaacgcgtcctgtaaactcctccaaaatcttgaagtaaacc 15459789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 17032740 - 17032831
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||| || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  17032740 tccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 17032831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 22434223 - 22434310
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatc 265  Q
    |||||||||| | ||||||| ||||||||||| ||  ||||||| ||||||||||| ||||| || ||||||||||||| ||||||||    
T  22434223 ctctccgactaatcatctgtctgcggatgatacgctgaactcaatctcaacttagaacccaaagcctcttgcaaactcttccaaaatc 22434310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 16963294 - 16963200
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||  |||||||||||||||| |  || || || ||||||||||| | ||||||||| |||||    
T  16963294 ctctccgactgaccatctgtctgcggatgatacgctgaactcaacctcaacttggtacctaaagcctcttgcaaacttttccaaaatctagaagt 16963200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 22762382 - 22762288
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||| |||||| |||||||||||||| ||| ||||||||||||||||| | || || || ||| ||||||| | ||||||||| |||||    
T  22762382 ctctccgactaaccatcagtttgcggatgatacgccgaactcaacctcaacttataacctaaagcctctggcaaacttttccaaaatctagaagt 22762288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 28263124 - 28263030
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||| || || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  28263124 ctctccgactgaccatccgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 28263030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 28341873 - 28341779
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||| || || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  28341873 ctctccgactgaccatccgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 28341779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 5297133 - 5297034
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| ||| ||||||||| || || ||||| || || || ||||||| ||| || || ||||||||||    
T  5297133 ctctccgactgaccatctgtctgaggatgataagccgaacccaacctcaatttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 5297034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 23078820 - 23078917
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||| | |||||| |||| ||| ||||||||||||||||| | || || |  ||||| ||||||| | ||||||| |||||    
T  23078820 gttctctccgactgaccatctctctgcggacgatacgccgaactcaacctcaacttataacctaaagactcttgtaaactcttcaaaaatctagaagt 23078917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 15078269 - 15078209
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaa 262  Q
    |||||||||||  |||||||||||||||||| |||||| ||| |||||||||||| |||||    
T  15078269 ggatgataagcagaactcaacctcaacttagttcccaaagcagcttgcaaactctcccaaa 15078209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 264
Target Start/End: Original strand, 15896446 - 15896534
Alignment:
Q  176 ttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaat 264  Q
    |||| |||||||||  |||||| ||||||||||| ||| |||||||| |||||||||| || |  || ||||||||||||| |||||||    
T  15896446 ttctttccgactgattatctgtctgcggatgatacgccgaactcaacttcaacttagaacctacagcctcttgcaaactcttccaaaat 15896534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 11280432 - 11280333
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||| ||||| ||||| || || ||||| |||||| |||||| |||||| || || ||||| |||||||||||||||| ||| ||||| || |||||||    
T  11280432 ctctctgactggccatcggtctgaggatggtaagccgaactcagcctcaatttcgagcccaaagcatcttgcaaactcttccagaatctagatgtgaacc 11280333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 20109198 - 20109153
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttga 326  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||    
T  20109198 ttgctgtttgtttattaactaagctgcatgagtcggtctaagttga 20109153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 21927583 - 21927644
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||||||||||  |||||||||||||||||| |||||| ||| |||||||||| | ||||||    
T  21927583 ggatgataagcagaactcaacctcaacttagttcccaatgcagcttgcaaactttcccaaaa 21927644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 23027606 - 23027558
Alignment:
Q  215 aactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||||||||||||||||| |||||| |||||||||||||| | ||||||    
T  23027606 aactcaacctcaacttagttcccaaagcatcttgcaaactttcccaaaa 23027558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 27333279 - 27333339
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    ||||||||||||  |||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  27333279 ttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 27333339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 27394019 - 27394079
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    ||||||||||||  |||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  27394019 ttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 27394079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 22408071 - 22408110
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacag 175  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  22408071 acataataaaataattaaataaataactagggcgttacag 22408110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 1072028 - 1072066
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  1072028 acataataaaataattaaataaataactagggcgttaca 1072066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 11583732 - 11583770
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  11583732 acataataaaataattaaataaataactagggcgttaca 11583770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 21894676 - 21894638
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  21894676 acatattaaaataattaaataaataactagggcgttaca 21894638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 1648717 - 1648656
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  1648717 ggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 1648656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 16098428 - 16098489
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  16098428 ggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 16098489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 16382276 - 16382215
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  16382276 ggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 16382215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 18837811 - 18837750
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  18837811 ggatggtaagcagaactcaaactcaacttagttcccaaagcagcttgcaaactctcccaaaa 18837750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 19668431 - 19668386
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttga 326  Q
    |||||||||||| ||||||||||||  ||||||| |||||||||||    
T  19668431 ttgctgtttgttaattaactaagctgcatgagtcggtctaagttga 19668386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 7e-37; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 21125482 - 21125380
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||| || ||||| |||||||||||||||| |||||||||||||||||    
T  21125482 gttctctccgactgaccatctgtttgcggatgataagtcgaactcaacctcaactttgaacccaatgcatcttgcaaactcttccaaaatcttgaagtga 21125383  T
Q  275 acc 277  Q
    |||    
T  21125382 acc 21125380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 169 - 277
Target Start/End: Original strand, 24641854 - 24641962
Alignment:
Q  169 gttacagttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttg 268  Q
    |||||||| || ||||||| ||||||||| ||||||||||||||| |||||||||||||||| || |||||| ||||||||||||||| |||||||||||    
T  24641854 gttacagtcctatccgactaaccatctgtctgcggatgataagccgaactcaacctcaacttcgaacccaagtcatcttgcaaactcttccaaaatcttg 24641953  T
Q  269 aagtgaacc 277  Q
    |||||||||    
T  24641954 aagtgaacc 24641962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 19652374 - 19652275
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| ||||||||||||| || || ||||| |||||||||||||||| ||||||||||||||||||||    
T  19652374 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaatttcgaacccaaagcatcttgcaaactcttccaaaatcttgaagtgaacc 19652275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 23276897 - 23276996
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||| ||||| || ||||| |||||||||||||||| ||| ||||| ||||||||||    
T  23276897 ctctccgactgaccatctgtctgaggatgataagccgaactcaaccttaacttcgaacccaatgcatcttgcaaactcttccagaatctagaagtgaacc 23276996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 23294079 - 23294178
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||||| |||||||| || |||| ||| ||||| ||||||||||    
T  23294079 ctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaacttcgaacccaaagcatcttgtaagctcttccagaatctagaagtgaacc 23294178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 23064198 - 23064292
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  23064198 ctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 23064292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 24675610 - 24675704
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||| ||||| || ||||||||||||| ||||||||| |||||    
T  24675610 ctctccgactgaccatctgtctgcggatgatacgccgaactcaatctcaacttagaacccaaagcctcttgcaaactcttccaaaatctagaagt 24675704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 24707804 - 24707716
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||| ||||| || ||||||||||||| |||||||||    
T  24707804 ctctccgactgaccatctgtctgcggatgatacgccgaactcaatctcaacttagaacccaaagcctcttgcaaactcttccaaaatct 24707716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 11358196 - 11358097
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || ||||||| ||| || || ||||||||||    
T  11358196 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtaaactcttccagaacctagaagtgaacc 11358097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 24948710 - 24948809
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||  |||| |||||||||||||||| ||| |||||  |||||||||    
T  24948710 ctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaacatcgaaaccaatgcatcttgcaaactcttccagaatctataagtgaacc 24948809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 27365401 - 27365302
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||| |||||| || || ||||| |||||||||||||||| ||| ||||| ||||||||||    
T  27365401 ctctccgactgaccatctgtctgaggatgataagccgaactcagcctcaatttcgagcccaaagcatcttgcaaactcttccagaatctagaagtgaacc 27365302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 16925481 - 16925575
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  16925481 ctctccgactgaccatctgtttgtggatgatatgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 16925575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 16999121 - 16999215
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  16999121 ctctccgactgaccatctgtttgtggatgatatgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 16999215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 16982270 - 16982367
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  16982270 gttctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 16982367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 17063835 - 17063932
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  17063835 gttctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 17063932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 17067493 - 17067590
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  17067493 gttctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 17067590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 16923008 - 16923104
Alignment:
Q  176 ttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  16923008 ttctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 16923104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 20828380 - 20828479
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || ||||| | ||| || || ||||||||||    
T  20828380 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtaaacttttccagaacctagaagtgaacc 20828479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 20833106 - 20833205
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || ||||| | ||| || || ||||||||||    
T  20833106 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtaaacttttccagaacctagaagtgaacc 20833205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 9610257 - 9610351
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  9610257 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 9610351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 21145363 - 21145269
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| ||||||||||||||||| |||||||| ||| ||||||| |||||||| || ||||| |||||||||||||| | ||||||||| |||||    
T  21145363 ctctctgactgaccatctgtttgtggatgatacgccgaactcaatctcaacttcgaacccaaagcatcttgcaaacttttccaaaatctagaagt 21145269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 22325178 - 22325084
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  22325178 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 22325084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 23189128 - 23189222
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||| | ||||||||||||||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  23189128 ctctccgactgaccatctatctgcggatgataagccgaactcaatctcaacttcgagcccaaagcctcttgcaaacttttccaaaatctagaagt 23189222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 24262491 - 24262585
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| ||||||||||||||||| |||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  24262491 ctctctgactgaccatctgtttgtggatgatacgccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 24262585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 24710154 - 24710248
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  24710154 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 24710248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 24825607 - 24825505
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||| ||||| ||||||||||| ||||||||||| ||| |||| |||||||||||||| || || || ||||||||||||| ||||||||| ||||| |    
T  24825607 gttctttccgattgaccatctgtctgcggatgatacgccgaacttaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagtaa 24825508  T
Q  275 acc 277  Q
    |||    
T  24825507 acc 24825505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 41608707 - 41608613
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| | ||||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  41608707 ctctccgactgaccatctgtctacggatgatacgccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 41608613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 27218134 - 27218231
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| ||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  27218134 gttctgtccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 27218231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 1063872 - 1063971
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||| || || |||||||| || || ||||||| ||| || || ||||||||||    
T  1063872 ctctccgactgaccatctgtttgaggatgataagccgaactcaacttcaatttcgaacccaaggcgtcctgtaaactcttccagaacctagaagtgaacc 1063971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 10868971 - 10869065
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  10868971 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 10869065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 21325588 - 21325494
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| |||  |||||| ||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  21325588 ctctccgactgaccatctgtctgcggatgatacgccggactcaatctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 21325494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 24877071 - 24876985
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaat 264  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | |||||||    
T  24877071 ctctccgactgaccatctgtttgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaat 24876985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 27371390 - 27371484
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| |||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  27371390 ctctctgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 27371484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 27787859 - 27787961
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| || |||||||||||| |||||| ||||||||| || ||||| || || || ||||||| ||| || || |||||||    
T  27787859 gttctctccgactgaccatctgtctgaggatgataagccgaactcagcctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtga 27787958  T
Q  275 acc 277  Q
    |||    
T  27787959 acc 27787961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 20442830 - 20442741
Alignment:
Q  183 cgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||| || |||||||||||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  20442830 cgactgaccatctgtctgtggatgataagccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 20442741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 22756787 - 22756699
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    |||||||||||||||||||| || | |||||| ||| ||||||| ||||||||||| ||||| || ||||| ||||||| |||||||||    
T  22756787 ctctccgactgaccatctgtctgtgtatgatacgccgaactcaatctcaacttagaacccaaagcctcttgaaaactcttccaaaatct 22756699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 12574474 - 12574573
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||| ||||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  12574474 ctctccgactgaccatctgtctgaggatgataagccgaactcagcctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 12574573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 31830779 - 31830878
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||| || ||||| || || || ||||| | ||| || || ||||||||||    
T  31830779 ctctccgactgaccatctgtttgaggatgataagccgaactcaacttcaactttgaacccaaagcgtcctgtaaacttttccagaacctagaagtgaacc 31830878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 30211239 - 30211145
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||| ||| |||||||| |||||||||||  || ||||||| ||||||||||| ||||| || || |||||||||| ||||||||| |||||    
T  30211239 ctctccgtctgtccatctgtctgcggatgatacaccgaactcaaactcaacttagaacccaacgcctcctgcaaactcttccaaaatctagaagt 30211145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 44385891 - 44385797
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||| ||||||| || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  44385891 ctctccgactgatcatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 44385797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 45529644 - 45529726
Alignment:
Q  190 ccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||| ||||||||||| ||| ||||||| ||||||||||| ||||| || || |||||||||| ||||||||| |||||    
T  45529644 ccatctgtctgcggatgatacgccgaactcaaactcaacttagaacccaacgcctcctgcaaactcttccaaaatctagaagt 45529726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 23087568 - 23087605
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagc 212  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  23087568 gttctctccgactgaccatctgtttgccgatgataagc 23087605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 25128792 - 25128853
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||||||||||  ||||||| |||||||||| |||||| |||||||||||||| | ||||||    
T  25128792 ggatgataagcagaactcaatctcaacttagttcccaaagcatcttgcaaactttcccaaaa 25128853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 31835306 - 31835345
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacag 175  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  31835306 acataataaaataattaaataaataactagggcgttacag 31835345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 70302 - 70264
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  70302 acataataaaataattaaataaataactagggcgttaca 70264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 1063047 - 1063085
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  1063047 acataataaaataattaaataaataactagggcgttaca 1063085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 1068440 - 1068478
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  1068440 acataataaaataattaaataaataactagggcgttaca 1068478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 4070307 - 4070269
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  4070307 acataataaaataattaaataaataactagggcgttaca 4070269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 20832281 - 20832319
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  20832281 acataataaaataattaaataaataactagggcgttaca 20832319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 20851543 - 20851581
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  20851543 acataataaaataattaaataaataactagggcgttaca 20851581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 27730885 - 27730923
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  27730885 acataataaaataattaaataaataactagggcgttaca 27730923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 28927410 - 28927448
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  28927410 acataataaaataattaaataaataactagggcgttaca 28927448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 30195293 - 30195255
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  30195293 acataataaaataattaaataaataactagggcgttaca 30195255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 31829954 - 31829992
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  31829954 acataataaaataattaaataaataactagggcgttaca 31829992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 298876 - 298933
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatga 338  Q
    ||||||||||||  |||||||||||  ||||||| ||||||||||||| | |||||||    
T  298876 ttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 298933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 20520254 - 20520295
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  20520254 ttgctgtttgtttattaactaagctgcatgagtcggtctaag 20520295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 23207337 - 23207296
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  23207337 ttgctgtttgtttattaactaagctgcatgagtcggtctaag 23207296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 25108943 - 25108906
Alignment:
Q  285 tgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  25108943 tgtttgtttattaactaagctacatgagtcggtctaag 25108906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 35586755 - 35586788
Alignment:
Q  142 taaaataattaaataaatagctagggcgttacag 175  Q
    ||||||||||||||||||| ||||||||||||||    
T  35586755 taaaataattaaataaataactagggcgttacag 35586788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 7679645 - 7679589
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatg 337  Q
    ||||||||||||  |||||||||||  ||||||| ||||||||||||| | ||||||    
T  7679645 ttgctgtttgttatttaactaagctgcatgagtcagtctaagttgattaagatgatg 7679589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 22761854 - 22761806
Alignment:
Q  215 aactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  22761854 aactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 22761806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 24480400 - 24480368
Alignment:
Q  142 taaaataattaaataaatagctagggcgttaca 174  Q
    ||||||||||||||||||| |||||||||||||    
T  24480400 taaaataattaaataaataactagggcgttaca 24480368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 40259 - 40358
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||    
T  40259 ctctccgactgaccatctctttgcggatgataagccgaactcaacctcaacttcgaacccaaggcatcttgcaaactcttccaaaatctagaagtgaacc 40358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 4948 - 5050
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||||||||||| |||||| |||||||| |    
T  4948 gttctctccgactgaccatctgtttgcggatgataagccgaactcaacctcaacttagaacccgaggaatcttgcaaactcttccaaaaccttgaagtaa 5047  T
Q  275 acc 277  Q
    |||    
T  5048 acc 5050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 326
Target Start/End: Original strand, 27814 - 27855
Alignment:
Q  285 tgtttgtttattaactaagctatatgagtctgtctaagttga 326  Q
    |||||||||||||||||||||  ||||||| |||||||||||    
T  27814 tgtttgtttattaactaagctgcatgagtcggtctaagttga 27855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 75; Significance: 2e-34; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 13689 - 13587
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| |||||||||||||||| |||||||||||||||||    
T  13689 gttctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaactttgaacccaatgcatcttgcaaactcttccaaaatcttgaagtga 13590  T
Q  275 acc 277  Q
    |||    
T  13589 acc 13587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 67897 - 67990
Alignment:
Q  184 gactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| || || ||||| |||||||| ||||||| ||||||||||||||| ||||    
T  67897 gactgaccatctgtctgcggatgataagccgaactcaacctcaattttgaacccaatgcatcttgtaaactcttccaaaatcttgaagtaaacc 67990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 4738 - 4639
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || ||| |||||||| |||||||||||||||| || ||||| ||||||||||| |||| ||| |||||  |||||||||    
T  4738 ctctccgactgaccatctgtctgaggacgataagccgaactcaacctcaacttcgaacccaatgcatcttgcaagctcttccagaatctaaaagtgaacc 4639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 32596 - 32551
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttga 326  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||    
T  32596 ttgctgtttgtttattaactaagctgcatgagtcggtctaagttga 32551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 48816 - 48720
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||| || |||||||||||||||||||||| |||| |||||||||||||||    
T  48816 tccgactgaccatctgtttgcggatgataagccgaactcaaccttaacttcgaacccaaggcatcttgcaaactcttccaacatcttgaagtgaacc 48720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 57601 - 57503
Alignment:
Q  179 tctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||| || |||||||||| | |||||||||||||||| || ||||| || |  |||||||||| ||| || || || |||||||    
T  57601 tctccgactgaccatctgtctgaggatgataagtcgaactcaacctcaacttcgaacccaaagcgttctgcaaactcttccagaacctagaggtgaacc 57503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 2315 - 2414
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| | ||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||    
T  2315 ctctccgactgaccatctgtctacggatgatatgccgaactcaacctcaacttagaacccaaggcatcttgcaaactcttccaaaatcgtgaagtgaacc 2414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 994 - 895
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| |||||||||||||||| ||||||||||||||||||||    
T  994 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgagcccaaagcatcttgcaaactcttccaaaatcttgaagtgaacc 895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 18322 - 18223
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||| ||||||||||||||| ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||    
T  18322 ctcttcgactgaccatctgtctgcggatgataagccgaactcaacctcaactttgaacccaaggcatcttgcaaactcttccaaaatctagaagtgaacc 18223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 2660 - 2561
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||||| |||||||||||||| ||||||||||||||||||||    
T  2660 ctctccgactgaccatctgtctgtggatgataagccgaactcaacctcaacttcgaacccaaggaatcttgcaaactcttccaaaatcttgaagtgaacc 2561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 27746 - 27845
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| | ||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||    
T  27746 ctctccgactgaccatctgtctacggatgataagccgaactcaacctcaacttcgaacccaaggcatcttgcaaactcttccaaaatctagaagtgaacc 27845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 7022 - 6923
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||||| |||||||||||||||| ||||||||| ||||||||||    
T  7022 ctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaacttcgaacccaaagcatcttgcaaactcttccaaaatctagaagtgaacc 6923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 11453 - 11354
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||||| |||||||||||||||| ||||||||| ||||||||||    
T  11453 ctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaacttcgaacccaaagcatcttgcaaactcttccaaaatctagaagtgaacc 11354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 14574048 - 14574147
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||    
T  14574048 ctctctgactgaccatctgtctgcggatgataagccgaactcaacctcaacttcgaacccaaggcatcttgcaaactcttccaaaatctagaagtgaacc 14574147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 15952978 - 15952879
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||| || ||||| |||||||||||||||| ||||||||| ||||||||||    
T  15952978 ctctccgactgaccatatgtttgcggatgataagccgaactcaacctcaacttcgaacccaatgcatcttgcaaactcttccaaaatctagaagtgaacc 15952879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 11303783 - 11303684
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| ||||||||||| || |||||||||| ||||||||| ||||||||||    
T  11303783 ctctccgactgaccatctgtctgtggatgataagccgaactcaacctcaacttcgatcccaaggcgtcctgcaaactcttccaaaatctagaagtgaacc 11303684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 17492749 - 17492848
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| ||||||||||||| || || |||||||||||||||||||||| ||||||||| ||||||||||    
T  17492749 ctctccgactgaccatctgtctgtggatgataagccgaactcaacctcaagttcgaccccaaggcatcttgcaaactcttccaaaatctagaagtgaacc 17492848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 16828212 - 16828113
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| | ||||||||||||| |||||||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||    
T  16828212 ctctccgactgaccatctgtctacggatgataagccgaactcaacctcaacttcgaacccaatgcatcttgcaaattcttccaaaatctagaagtgaacc 16828113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 14086789 - 14086891
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||| || || ||||| |||||||||||||||| ||| ||||| |||||||    
T  14086789 gttctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaatttcgagcccaaagcatcttgcaaactcttccagaatctagaagtga 14086888  T
Q  275 acc 277  Q
    |||    
T  14086889 acc 14086891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 9522828 - 9522922
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||||| ||||||||| |||||    
T  9522828 ctctccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagt 9522922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 12850292 - 12850190
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| | ||||| ||||||| |||||||||||||||| ||  ||||||| ||||| ||||||| |||||| ||||||||||    
T  12850292 gttctctccgactgaccatctgtctacggattataagccgaactcaacctcaactttgaatccaaggcctcttgtaaactcttccaaaaccttgaagtga 12850193  T
Q  275 acc 277  Q
    |||    
T  12850192 acc 12850190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 12360552 - 12360453
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||||| |||||||| || |||| ||| ||||| || |||||||    
T  12360552 ctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaacttcgaacccaatgcatcttgtaatctcttccataatctagatgtgaacc 12360453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 13972130 - 13972031
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||| |||||| || || ||||| |||||||||||||||| ||| ||||| ||||||||||    
T  13972130 ctctccgactgaccatctgtctggggatgataagccgaactcagcctcaatttcgagcccaaagcatcttgcaaactcttccagaatctagaagtgaacc 13972031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 17489959 - 17490053
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  17489959 ctctccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 17490053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 48425553 - 48425650
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  48425553 gttctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 48425650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 10384088 - 10384163
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaac 253  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || |||||||    
T  10384088 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgcaaac 10384163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 16329671 - 16329572
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||| || |||||||| ||||| ||||||| ||| || || ||| ||||||    
T  16329671 ctctccgactaaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcttgtaaactcttccagaacctagaaatgaacc 16329572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 16836520 - 16836421
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| || || |||||||||| ||| ||||| || |||||||    
T  16836520 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgcaaactcttccagaatctagatgtgaacc 16836421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 5424951 - 5424857
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  5424951 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 5424857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 6600845 - 6600939
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  6600845 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 6600939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 12498357 - 12498451
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  12498357 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 12498451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 13252799 - 13252893
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  13252799 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 13252893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 14126611 - 14126521
Alignment:
Q  182 ccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||| || ||||| ||||| | ||||||||| |||||    
T  14126611 ccgactgaccatctgtctgcggatgataagccgaactcaatctcaacttagaacccaaagcctcttgaaaacttttccaaaatctagaagt 14126521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 15348266 - 15348172
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  15348266 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 15348172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 16492202 - 16492108
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||||||||||||  || ||||||||||||||||||| || || || ||||||||||| | ||| ||||| |||||    
T  16492202 ctctccgactgaccatctgtttgcggatgatacaccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccataatctagaagt 16492108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 16635882 - 16635976
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  16635882 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 16635976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 26792420 - 26792326
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| ||||||||||||||||| |||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  26792420 ctctctgactgaccatctgtttgtggatgatacgccgaactcaacctcaactttgaacccaaagcctcttgcaaacttttccaaaatctagaagt 26792326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 43163206 - 43163300
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  43163206 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 43163300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 15248253 - 15248350
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||| ||||||||||||| ||| ||||||| ||| | ||||||||||||||||| || || || ||||||||||||| ||||||||| |||||    
T  15248253 gttctctccaactgaccatctgtctgctgatgatacgccgagctcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagt 15248350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 15724955 - 15724867
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    ||||| |||||||||||||| ||||||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | |||||||||    
T  15724955 ctctctgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatct 15724867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 4678557 - 4678656
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||| ||||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  4678557 ctctccgactgaccatctgtttgaggatgataagccgaactcagcctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 4678656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 10420055 - 10419956
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||||| || || ||||| || || || ||||||  ||||||||||||||| ||||    
T  10420055 ctctccgactgaccatcagtctgcggatgataagccgaactcaacctcaattttgaacccaacgcgtcctgtaaactcctccaaaatcttgaagtaaacc 10419956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 13322662 - 13322563
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||| ||| | || |||||  ||||||||||||||| ||| ||||| ||||| ||||    
T  13322662 ctctccgactgaccatctgtctgaggatgataagccgaactcaaccttaacctcgaacccaaaacatcttgcaaactcttccagaatctagaagtaaacc 13322563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 14876517 - 14876426
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||| ||||||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  14876517 tccgactgaccatctgtctgcggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 14876426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 15061868 - 15061959
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||| |||| |||||| ||| ||||||| ||||||||||| ||||| || ||||||||||| | ||||||||| |||||    
T  15061868 tccgactgaccatctgtctgcgtatgatacgccgaactcaatctcaacttagaacccaaagcctcttgcaaactattccaaaatctagaagt 15061959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 15227765 - 15227856
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    ||||||||||||||||||  ||||||||||||||||||  ||||| |||||||||| || ||||| || ||||||||||| | |||||||||    
T  15227765 gttctctccgactgaccaattgtttgcggatgataagctgaactccacctcaactttgaacccaacgcctcttgcaaacttttccaaaatct 15227856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 16338522 - 16338423
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || ||||| || || || ||||||| ||| || || ||| ||||||    
T  16338522 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaactgaacc 16338423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 16371525 - 16371616
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||| |||||||||| ||||||||||| ||| ||||||| ||||||||||| ||||| || ||||||||||| | ||||||||| |||||    
T  16371525 tccgaccgaccatctgtctgcggatgatacgccgaactcaatctcaacttagaacccaaagcctcttgcaaacttttccaaaatctagaagt 16371616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 28754437 - 28754536
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||| || |||||||| || || ||||||| ||| || || ||||| ||||    
T  28754437 ctctccgactgaccatctgtttgaggatgataagccgaactcaacttcaacttcgaacccaaggcgtcctgtaaactcttccagaacctagaagtaaacc 28754536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 10906319 - 10906413
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  10906319 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 10906413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 15589413 - 15589319
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  15589413 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 15589319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 16806947 - 16806853
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| |||||||| || ||||| || |||||| |||| | |||||| || |||||    
T  16806947 ctctccgactgaccatctgtctgcggatgataagccgaactcaatctcaactttgaacccaaagcctcttgctaacttttccaaaacctagaagt 16806853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 20062075 - 20061981
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  20062075 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 20061981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 8759092 - 8758993
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||| ||||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  8759092 ctctccgactgaccatctgtctgaggatgataagccgaactcagcctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 8758993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 41177641 - 41177740
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||| ||||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  41177641 ctctccgactgaccatctgtctgaggatgataagccgaactcagcctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 41177740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 44777366 - 44777465
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||| ||||||||| || ||||| ||||| || ||||||| ||| || || ||||| ||||    
T  44777366 ctctccgactgaccatctgtctgaggatgataagccgaactcagcctcaacttcgagcccaaagcatcctgtaaactcttccagaacctagaagtaaacc 44777465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 47124063 - 47124162
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||| || ||||| || || || ||||| | ||| || || ||||||||||    
T  47124063 ctctccgactgaccatctgtttgaggatgataagccgaactcaacttcaactttgaacccaaagcgtcctgtaaacttttccagaacctagaagtgaacc 47124162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 10005709 - 10005803
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || ||||| || ||||| ||||| | ||||||||| |||||    
T  10005709 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgtaaacttttccaaaatctagaagt 10005803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 12558310 - 12558352
Alignment:
Q  132 ctctacatagtaaaataattaaataaatagctagggcgttaca 174  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12558310 ctctacatagtaaaataattaaataaatagctagggcgttaca 12558352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 16412303 - 16412209
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| ||||||||||||||||| || |||||  || |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  16412303 ctctctgactgaccatctgtttgtggttgatactccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 16412209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 16756606 - 16756512
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| |||||||||||||| || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  16756606 ctctctgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 16756512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 53385039 - 53384945
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||| || || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  53385039 ctctccgactgaccatccgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 53384945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 15208998 - 15209094
Alignment:
Q  176 ttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||| |||||||||||||| ||||||||||| ||| | ||||||||||||||||| || |   | ||||||||| ||| ||||||||| |||||    
T  15208998 ttctctcagactgaccatctgtctgcggatgatacgccgagctcaacctcaacttagaacctacaacctcttgcaaaatcttccaaaatctagaagt 15209094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 13942143 - 13942242
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| ||||||  |||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  13942143 ctctccgactgaccatctgtctgaggatgataagccgaactcagtctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 13942242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 16380938 - 16380860
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactct 256  Q
    |||||||||||||||||||| || | |||||||||| ||||||| |||||||| || ||||| || || ||||||||||    
T  16380938 ctctccgactgaccatctgtctgagaatgataagccgaactcaatctcaacttcgaacccaaagcgtcctgcaaactct 16380860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 11961041 - 11960992
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaactt 230  Q
    ||||||||||||||||| || |||||||||||| ||||||||||||||||    
T  11961041 tccgactgaccatctgtctgaggatgataagccgaactcaacctcaactt 11960992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 18134354 - 18134257
Alignment:
Q  180 ctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||| || ||||||||||   |||||||||||||||| || ||||| |  || |||||||||| ||| |||||  |||||||||    
T  18134354 ctccgactgaccatctgtctgaggatgataagttgaactcaacctcaacttcgaacccaaagtgtcctgcaaactcttccagaatctataagtgaacc 18134257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 13002024 - 13002070
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaa 221  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||||||    
T  13002024 gttctctccgaatgaccatctgtttgcgggtgataagccgaactcaa 13002070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 15402531 - 15402437
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||| |||| |  |||||||| ||| ||||||| |||| ||| || ||||| || ||||||||||| | ||||||||| |||||    
T  15402531 ctctccgactgaccagctgtctatggatgatacgccgaactcaatctcagcttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 15402437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 15015756 - 15015683
Alignment:
Q  199 tgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||| ||| ||||||| ||||||||||| ||||| || || |||||||||| || |||||| |||||    
T  15015756 tgcggatgatatgccgaactcaaactcaacttagaacccaacgcctcctgcaaactcttcctaaatctagaagt 15015683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 26009003 - 26008954
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaa 227  Q
    |||||||||||||||||||| || |||||||||||| |||||| ||||||    
T  26009003 ctctccgactgaccatctgtctgaggatgataagccgaactcagcctcaa 26008954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 21353520 - 21353560
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacagt 176  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  21353520 acataataaaataattaaataaataactagggcgttacagt 21353560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 177
Target Start/End: Original strand, 28760214 - 28760249
Alignment:
Q  142 taaaataattaaataaatagctagggcgttacagtt 177  Q
    ||||||||||||||||||| ||||||||||||||||    
T  28760214 taaaataattaaataaataactagggcgttacagtt 28760249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 277
Target Start/End: Complemental strand, 267269 - 267179
Alignment:
Q  187 tgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||| | ||| |||||||||||  |||||||| ||| ||||| |||||| ||  |||||||||||| ||||||  ||||||| ||||    
T  267269 tgaccatcagcttgaggatgataagcagaactcaacttcagcttagttcccaaagctacttgcaaactctcccaaaacattgaagtaaacc 267179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 3781561 - 3781523
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  3781561 acataataaaataattaaataaataactagggcgttaca 3781523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 15339378 - 15339472
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||| ||||||||||||||| ||  ||||||| ||| ||||||| |||| ||  || ||||| || ||||||||||| | ||||||||| |||||    
T  15339378 ctcttcgactgaccatctgtctgtcgatgatacgccgaactcaatctcagctacgaacccaaagcctcttgcaaacttttccaaaatctagaagt 15339472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 50654803 - 50654769
Alignment:
Q  142 taaaataattaaataaatagctagggcgttacagt 176  Q
    ||||||||||||||||||| |||||||||||||||    
T  50654803 taaaataattaaataaataactagggcgttacagt 50654769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 51247076 - 51247114
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  51247076 acataataaaataattaaataaataactagggcgttaca 51247114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 51478189 - 51478227
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  51478189 acataataaaataattaaataaataactagggcgttaca 51478227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 53570048 - 53570010
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  53570048 acataataaaataattaaataaataactagggcgttaca 53570010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 12377981 - 12377940
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    ||||||||||| ||||||||||||| |||||||| |||||||    
T  12377981 ttgctgtttgtctattaactaagctgtatgagtcggtctaag 12377940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 15576893 - 15576954
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  15576893 ggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 15576954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 16692269 - 16692330
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaa 239  Q
    ||||||||||||||||| || || |||||||||||  ||||||| |||||||| || |||||    
T  16692269 ctctccgactgaccatccgtctgtggatgataagctgaactcaatctcaacttcgaacccaa 16692330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 16742716 - 16742639
Alignment:
Q  186 ctgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||||||| || || ||||| |||||  ||||||| |||||||||| ||| || ||| |||||||||||| ||||||    
T  16742716 ctgaccatcggtctgaggatggtaagcagaactcaatctcaacttagttcctaaagcagcttgcaaactctcccaaaa 16742639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 18748808 - 18748869
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||||||||||  ||||||||||||| |||| |||||| ||| |||||||||| | ||||||    
T  18748808 ggatgataagcagaactcaacctcaatttagttcccaaagcagcttgcaaactttcccaaaa 18748869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 22110413 - 22110454
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  22110413 ttgctgtttgtttattaactaagctgcatgagtcggtctaag 22110454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 25476453 - 25476506
Alignment:
Q  288 ttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    |||||| |||||||||||| ||||||| ||||||||||||  | ||||||||||    
T  25476453 ttgttttttaactaagctacatgagtcggtctaagttgatgaagatgatgatgt 25476506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 338
Target Start/End: Complemental strand, 27165307 - 27165250
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatga 338  Q
    ||||||||||||  |||||||||||  ||||||| ||||||||||||| | |||||||    
T  27165307 ttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 27165250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 338
Target Start/End: Complemental strand, 28194750 - 28194693
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatga 338  Q
    ||||||||||||  |||||||||||  ||||||| ||||||||||||| | |||||||    
T  28194750 ttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 28194693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 43926018 - 43925977
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  43926018 ttgctgtttgtttattaactaagctgcatgagtcggtctaag 43925977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 47122495 - 47122528
Alignment:
Q  142 taaaataattaaataaatagctagggcgttacag 175  Q
    ||||||||||||||||||| ||||||||||||||    
T  47122495 taaaataattaaataaataactagggcgttacag 47122528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 47129861 - 47129894
Alignment:
Q  142 taaaataattaaataaatagctagggcgttacag 175  Q
    ||||||||||||||||||| ||||||||||||||    
T  47129861 taaaataattaaataaataactagggcgttacag 47129894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 53301612 - 53301669
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatga 338  Q
    ||||||||||||  ||||||||| | |||||||| ||||||||||||| | |||||||    
T  53301612 ttgctgtttgttatttaactaagttgtatgagtcggtctaagttgattaagatgatga 53301669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 17193236 - 17193288
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaact 254  Q
    |||||||||||  |||||||||||||||||| |||||| | | ||||||||||    
T  17193236 ggatgataagcagaactcaacctcaacttagttcccaaagaagcttgcaaact 17193288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 19854818 - 19854917
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||    
T  19854818 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaactttgaacccaaggcatcttgcaaactcttccaaaatctagaagtgaacc 19854917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 41308330 - 41308408
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactct 256  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  41308330 ctctccgactgaccatctgtttgcggatgataagccgaactcaatctcaacttagaacccaaggcatcttgcaaactct 41308408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 19662995 - 19662896
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| |||||||| ||||||| ||||||||| || |||||||    
T  19662995 ctctccgactgaccatctgtctgtggatgataagccgaactcaacctcaacttcgaacccaaagcatcttgtaaactcttccaaaatctagaggtgaacc 19662896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 24099457 - 24099358
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||| | |||||||| |||||||||||||||| ||| || || ||||||||||    
T  24099457 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacctcgatcccaaagcatcttgcaaactcttccagaacctagaagtgaacc 24099358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 272
Target Start/End: Complemental strand, 50620101 - 50620004
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||||| ||||||||| |||||    
T  50620101 gttctttccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagt 50620004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 37677585 - 37677684
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || ||||||| ||| || || ||||||||||    
T  37677585 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtaaactcttccagaacctagaagtgaacc 37677684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 21749446 - 21749540
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  21749446 ctctccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 21749540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 21830808 - 21830902
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  21830808 ctctccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 21830902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 16369799 - 16369896
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||| | || || || |||||||||| || ||||||||| |||||    
T  16369799 gttctctccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttatagcctaaagcctcttgcaaacccttccaaaatctagaagt 16369896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 272
Target Start/End: Complemental strand, 51333350 - 51333253
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  51333350 gttctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 51333253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 20294917 - 20295016
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || | ||||| ||| || || ||||||||||    
T  20294917 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtagactcttccagaacctagaagtgaacc 20295016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 20939917 - 20939818
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||||||||||||||||| | |||||  |||||||||  | |||||  | ||||||||||||| ||||||||| ||||||||||    
T  20939917 ctctccgactgaccatctgtttgcggatgataagtcgaactcggcctcaacttctaacccaaaacgtcttgcaaactcttccaaaatctagaagtgaacc 20939818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 16078506 - 16078412
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| | ||||||||||||| ||||||| |||||||| ||  |||| || ||||||||||||| ||||||||| |||||    
T  16078506 ctctccgactgaccatctgtctacggatgataagccgaactcaatctcaacttcgaagccaaagcctcttgcaaactcttccaaaatctagaagt 16078412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 16350453 - 16350359
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  16350453 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 16350359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 21837455 - 21837549
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  21837455 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 21837549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 22362098 - 22362004
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||| ||| ||||||||||| ||| |||||||||||||||||||||  || || ||||||||||| | ||||||||| |||||    
T  22362098 ctctccgactgaccatatgtctgcggatgatacgccgaactcaacctcaacttagatcttaaagcctcttgcaaacttttccaaaatctagaagt 22362004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 33390883 - 33390789
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  33390883 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 33390789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 20856612 - 20856516
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||| ||| ||||||||||||||| |||||||  |||| || || ||||| |||||||| ||||||| ||||||||||||||| ||||    
T  20856612 tccgactgaccatatgtctgcggatgataagccgaactcaatttcaatttcgaacccaacgcatcttgtaaactcttccaaaatcttgaagtaaacc 20856516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 22432970 - 22432871
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| || || |||||||||| ||| || ||  |||||||||    
T  22432970 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgcaaactcttccagaacctataagtgaacc 22432871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 17044869 - 17044775
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||| |||||||| || ||||| || ||||||||||| | |||||| || |||||    
T  17044869 ctctccgactgaccatctgtctgcagatgataagccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaacctagaagt 17044775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 19106872 - 19106966
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  19106872 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 19106966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 20835745 - 20835643
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||| ||||| ||||| || |||||||||||| |||||||||||||||| || ||||| ||||||||  | |||| ||| ||||| |||||||    
T  20835745 gttctctccgattgaccgtctgtctgaggatgataagccgaactcaacctcaacttcgaacccaatgcatcttgtcagctcttccagaatctagaagtga 20835646  T
Q  275 acc 277  Q
    |||    
T  20835645 acc 20835643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 19760723 - 19760632
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    ||||| ||||||||||||||||| ||||||||||| ||| |||| ||| |||||||||| || || || ||||||||||||| | |||||||    
T  19760723 gttctttccgactgaccatctgtctgcggatgatacgccgaacttaacttcaacttagaacctaaagcttcttgcaaactcttctaaaatct 19760632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 41354323 - 41354229
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||| ||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||| ||| | ||||||||| |||||    
T  41354323 ctctccgattgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcagacttttccaaaatctagaagt 41354229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 31539851 - 31539752
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||| |||  || || |||||||| || || ||||| | ||| || || ||||||||||    
T  31539851 ctctccgactgaccatctgtctgaggatgataagccgaactcaacttcattttcgaacccaaggcgtcctgtaaacttttccagaacctagaagtgaacc 31539752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 11523106 - 11523145
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacag 175  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  11523106 acataataaaataattaaataaataactagggcgttacag 11523145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 39188439 - 39188400
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacag 175  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  39188439 acataataaaataattaaataaataactagggcgttacag 39188400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 27691894 - 27691856
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  27691894 acataataaaataattaaataaataactagggcgttaca 27691856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 33683045 - 33683007
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  33683045 acatagtaaaataattaaataaataattagggcgttaca 33683007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 16368347 - 16368388
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  16368347 ttgctgtttgtttattaactaagctgcatgagtcggtctaag 16368388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 20831222 - 20831161
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  20831222 ggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 20831161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 22135387 - 22135326
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||||||||||  |||||||||||||||||| ||| || ||| |||||||||| | ||||||    
T  22135387 ggatgataagcagaactcaacctcaacttagttcctaaagcagcttgcaaactttcccaaaa 22135326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 35261139 - 35261180
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  35261139 ttgctgtttgtttattaactaagctgcatgagtcggtctaag 35261180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 50614178 - 50614219
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  50614178 ttgctgtttgtttattaactaagctgcatgagtcggtctaag 50614219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 50622006 - 50622047
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  50622006 ttgctgtttgtttattaactaagctgcatgagtcggtctaag 50622047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 5027371 - 5027403
Alignment:
Q  142 taaaataattaaataaatagctagggcgttaca 174  Q
    ||||||||||||||||||| |||||||||||||    
T  5027371 taaaataattaaataaataactagggcgttaca 5027403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 272
Target Start/End: Original strand, 20139361 - 20139429
Alignment:
Q  204 atgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||| ||||||||||||||||||| ||| || || || ||||| ||||| | ||||||||| |||||    
T  20139361 atgatacgccaaactcaacctcaactcagaacctaaagcttcttgtaaacttttccaaaatctagaagt 20139429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 48429218 - 48429250
Alignment:
Q  142 taaaataattaaataaatagctagggcgttaca 174  Q
    ||||||||||||||||||| |||||||||||||    
T  48429218 taaaataattaaataaataactagggcgttaca 48429250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 4393 - 4495
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||||||||| || ||||| |||||||||||||||| |||||| ||||||||||    
T  4393 gttctctccgactgaccatctctctgcggatgataagccgaactcaacctcaactttgaacccaatgcatcttgcaaactcttccaaaaccttgaagtga 4492  T
Q  275 acc 277  Q
    |||    
T  4493 acc 4495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 6824 - 6722
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| || |||||||| ||||| ||||||| |||||| ||||||||||    
T  6824 gttctctccgactgaccatttgtttgcggatgataagccgaactcaacctcaactttgaacccaaggcctcttgtaaactcttccaaaaccttgaagtga 6725  T
Q  275 acc 277  Q
    |||    
T  6724 acc 6722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 4e-32; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 19851964 - 19852066
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| || || ||||| ||||||||| |||||| |||||| ||||||||||    
T  19851964 gttctctccgactgaccatctgtttgcggatgataagccgaactcaacctcaattttgaacccaatgcatcttgcgaactcttccaaaaccttgaagtga 19852063  T
Q  275 acc 277  Q
    |||    
T  19852064 acc 19852066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 19858000 - 19858102
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| || || ||||| ||||||||| |||||| |||||| ||||||||||    
T  19858000 gttctctccgactgaccatctgtttgcggatgataagccgaactcaacctcaattttgaacccaatgcatcttgcgaactcttccaaaaccttgaagtga 19858099  T
Q  275 acc 277  Q
    |||    
T  19858100 acc 19858102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 21840970 - 21841072
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||| |||||||||||||  ||||||| |||||||||||||||||    
T  21840970 gttctctccgactgaccatttgtttgcagatgatgagccgaactcaacctcaacttagaacccaaggcatcttttaaactcttccaaaatcttgaagtga 21841069  T
Q  275 acc 277  Q
    |||    
T  21841070 acc 21841072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 803898 - 803799
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| || || ||||||| ||||||||| ||||||||||    
T  803898 ctctccgactgaccatctgtttgaggatgataagccaaactcaacctcaacttcgaacccaaggcgtcctgtaaactcttccaaaatctagaagtgaacc 803799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 31416699 - 31416600
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| |||||||| |||||||||||||||| ||| ||||| ||||||||||    
T  31416699 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgatcccaaagcatcttgcaaactcttccagaatctagaagtgaacc 31416600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 20388653 - 20388749
Alignment:
Q  176 ttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||| |||||| | ||||||||| |||||    
T  20388653 ttctctccgactgaccatctgtttgcggatgataagccgaactcaacctcaacttagaacccaacgcctcttacaaacttttccaaaatctagaagt 20388749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 20975876 - 20975777
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||||| ||||| |||||||||| ||| ||||| ||||||||||    
T  20975876 ctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaacttcgaacccaaagcatcatgcaaactcttccagaatctagaagtgaacc 20975777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 22371493 - 22371595
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||| || ||||| |||||||||||||||| |||||| |||||||| |    
T  22371493 gttctctccgactcaccatctgtttgcggattataagccgaacccaacctcaactttgaacccaacgcatcttgcaaactcttccaaaaccttgaagtaa 22371592  T
Q  275 acc 277  Q
    |||    
T  22371593 acc 22371595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 23655483 - 23655582
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||| |||||||||||||| |||||||||||| || |||||||||||||||  || |||||||| ||||||||||||| ||||||||| ||||||||||    
T  23655483 ctctctgactgaccatctgtctgcggatgataacccgaactcaacctcaactccgaacccaaggcgtcttgcaaactcttccaaaatctagaagtgaacc 23655582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 20010128 - 20010026
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||| ||||||||||  ||||||||||||||| |||||| ||| ||||| || |||||||||||||| ||||||| |||||| ||||||||||    
T  20010128 gttctctccgaatgaccatctgcctgcggatgataagccgaactcacccttaactttgaacccaaggcatcttgtaaactcttccaaaaccttgaagtga 20010029  T
Q  275 acc 277  Q
    |||    
T  20010028 acc 20010026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 22377682 - 22377580
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||| ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||||| ||||||||| ||||| |    
T  22377682 gttctttccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaaccaaaagcctcttgcaaactcttccaaaatctagaagtaa 22377583  T
Q  275 acc 277  Q
    |||    
T  22377582 acc 22377580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 22383857 - 22383755
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||| ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||||| ||||||||| ||||| |    
T  22383857 gttctttccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaaccaaaagcctcttgcaaactcttccaaaatctagaagtaa 22383758  T
Q  275 acc 277  Q
    |||    
T  22383757 acc 22383755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 16408270 - 16408182
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||| || ||||||||||| | |||||||||    
T  16408270 ctctccgactgaccatctgtctgcggatgataagccgaactcaatctcaacttagaacccaaagcctcttgcaaacttttccaaaatct 16408182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 1266794 - 1266893
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||| ||||||||||||| |||||||||||| ||||||| |||||||| || ||||| ||||||||||| |||| ||| ||||| ||||||||||    
T  1266794 ctctccgaccgaccatctgtttgaggatgataagccgaactcaatctcaactttgaacccaaagcatcttgcaagctcttccataatctagaagtgaacc 1266893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 16271449 - 16271350
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || ||||||| ||| || || ||||||||||    
T  16271449 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtaaactcttccataacctagaagtgaacc 16271350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 21166762 - 21166668
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||| ||||| || ||||||||||| | ||||||||| |||||    
T  21166762 ctctccgactgaccatctgtctgcggatgatacgccgaactcaatctcaacttagaacccaaagcctcttgcaaacttttccaaaatctagaagt 21166668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 21394090 - 21393996
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | || || || ||||||||||| | ||||||||| |||||    
T  21394090 ctctccgactgaccatctgtttgcggatgatacgccgaactcaacctcaacttaaaacctaaagcctcttgcaaacttttccaaaatctggaagt 21393996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 21788584 - 21788490
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | || || || ||||||||||| | ||||||||| |||||    
T  21788584 ctctccgactgaccatctgtttgcggatgatacgccgaactcaacctcaacttaaaacctaaagcctcttgcaaacttttccaaaatctggaagt 21788490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 30313369 - 30313275
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  30313369 ctctccaactgaccatctgtttgcggatgataagccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 30313275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 23650594 - 23650691
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  23650594 gttctctccgattgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 23650691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 22120399 - 22120311
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    |||||| ||||||||||||| ||||||||||| ||| |||||||||||||||| || ||||| || ||||||||||||| |||||||||    
T  22120399 ctctccaactgaccatctgtctgcggatgatacgccgaactcaacctcaacttcgaacccaaagcctcttgcaaactcttccaaaatct 22120311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 6604214 - 6604313
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| || || ||||| | ||| || || ||||||||||    
T  6604214 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaggcgtcctgtaaacttttccagaacctagaagtgaacc 6604313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 27355104 - 27355203
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||||||||||| || ||||| || || || ||||||| ||| ||||| ||||||||||    
T  27355104 ctctccgactgaccatccgtttgaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgtaaactcttccagaatctagaagtgaacc 27355203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 17674248 - 17674154
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  17674248 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 17674154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 18857133 - 18857227
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||| ||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  18857133 ctctccgactgaccatctgtctgcgggtgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 18857227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 19113246 - 19113340
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  19113246 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 19113340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 20017975 - 20017881
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||||||| | ||||||||| |||||    
T  20017975 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcaaacttttccaaaatctagaagt 20017881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 20396353 - 20396251
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||| ||||||||||||||||| ||| ||||||| ||| ||||||||| || |||||| ||||| || ||||||||||||| ||||||||| ||||| |    
T  20396353 gttctttccgactgaccatctgtctgcagatgatacgccgaactcaaccacagcttagaacccaaagcctcttgcaaactcttccaaaatctagaagtaa 20396254  T
Q  275 acc 277  Q
    |||    
T  20396253 acc 20396251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 21251497 - 21251591
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||| |||||| || |||||||| ||||||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  21251497 ctctccgactgactatctgtctgtggatgatacgccaaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 21251591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 21921960 - 21921866
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||| ||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  21921960 ctctacgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 21921866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 22046929 - 22047023
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||||| || || || || || ||||||||||||| ||||||||| |||||    
T  22046929 ctctccgactgaccatctgtctgcggatgataagccgaactcaatctcaatttcgaacctaaagcctcttgcaaactcttccaaaatctagaagt 22047023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 22987760 - 22987846
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatctt 267  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||| || || || |||| |||||||| ||||||||||    
T  22987760 tccgactgaccatctgtctgcggatgataagccgaacgcaacctcaacttagaacctaaagcctcttacaaactcttccaaaatctt 22987846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 14565701 - 14565797
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  14565701 tccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 14565797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 6679667 - 6679766
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||| || |||||||| || || ||||| | ||| || || ||||||||||    
T  6679667 ctctccgactgaccatctgtttgaggatgataagccgaactcaacttcaacttcgaacccaaggcgtcctgtaaacttttccagaacctagaagtgaacc 6679766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 19978523 - 19978617
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| | | | ||||| ||||||||||| ||||| || || |||||||||| ||||||||| |||||    
T  19978523 ctctccgactgaccatctgtctgcggatgatacgtcgagctcaatctcaacttagaacccaaagcctcctgcaaactcttccaaaatctagaagt 19978617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 22040415 - 22040509
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||| ||||| || || || || || ||||||||||||| ||||||||| |||||    
T  22040415 ctctccaactgaccatctgtctgcggatgataagccgaactcaatctcaatttcgaacctaaagcctcttgcaaactcttccaaaatctagaagt 22040509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 22133266 - 22133172
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||  ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  22133266 ctctccgactgaccatctgtctgcggatgatacgctgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 22133172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 31571070 - 31570968
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| || |||||||||||| |||||| ||||||||| || ||||| || || || ||||||| ||| || || |||||||    
T  31571070 gttctctccgactgaccatctgtctgaggatgataagccgaactcagcctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtga 31570971  T
Q  275 acc 277  Q
    |||    
T  31570970 acc 31570968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 32600700 - 32600794
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||||||| || ||||| || ||||||||||| | |||||| || |||||    
T  32600700 ctctccgactgaccatctgtctgtggatgataagccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaacctagaagt 32600794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 22051419 - 22051518
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||||||| || ||||| || || |||||||||| ||| || || || |||||||    
T  22051419 ctctccgactgaccatctgtctgaggatgataagccgaactcaatctcaacttggaacccaaagcgtcctgcaaactcttccagaacctagaggtgaacc 22051518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 22061658 - 22061559
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||| ||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| || || |||| ||||| ||| || || ||||||||||    
T  22061658 ctcttcgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgcagactcttccagaacctagaagtgaacc 22061559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 29303651 - 29303552
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||| | || ||||| || || || ||||||| ||| || || ||||||||||    
T  29303651 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacctcgaacccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 29303552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 15533936 - 15534030
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||| ||||||||||| | || |||||||||||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  15533936 ctctccaactgaccatctttctgtggatgataagccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 15534030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 19485095 - 19485001
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||| ||||||||||| || |||||||| ||| ||||||| |||||||| || |||||||| ||||||| ||| | ||||||||| |||||    
T  19485095 ctctccgattgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaggcctcttgcagacttttccaaaatctagaagt 19485001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 12305314 - 12305375
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaa 239  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||| || |||||    
T  12305314 ctctccgactgaccatctgtttgaggatgataagccgaactcaatctcaacttcgaacccaa 12305375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 23949478 - 23949574
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||| | ||||||||||| ||| ||||||||||||||||||| || ||  | | ||||| ||||| ||||||||| ||||| ||||    
T  23949478 tccgactgaccatctatctgcggatgatacgccgaactcaacctcaacttagaacctaaaacctattgcatactcttccaaaatctagaagtaaacc 23949574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 236956 - 236915
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacagtt 177  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  236956 acataataaaataattaaataaatagctagggcgttacagtt 236915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 801420 - 801461
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacagtt 177  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  801420 acataataaaataattaaataaatagctagggcgttacagtt 801461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 806814 - 806773
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacagtt 177  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  806814 acataataaaataattaaataaatagctagggcgttacagtt 806773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 22164417 - 22164323
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| |||||||||| ||| ||||||||| | ||  ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  22164417 ctctctgactgaccatatgtctgcggatgacacgctgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 22164323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 21850562 - 21850477
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||||| ||| ||||| || || ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  21850562 ctctccgtctgcccatcggtctgaggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 21850477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 6520428 - 6520368
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    ||||||||||||  |||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  6520428 ttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 6520368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 38855312 - 38855372
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    ||||||||||||  |||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  38855312 ttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 38855372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 14568404 - 14568443
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacag 175  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  14568404 acataataaaataattaaataaataactagggcgttacag 14568443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 4519510 - 4519472
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  4519510 acataataaaataattaaataaataactagggcgttaca 4519472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 6603389 - 6603427
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  6603389 acataataaaataattaaataaataactagggcgttaca 6603427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 6610214 - 6610252
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  6610214 acataataaaataattaaataaataactagggcgttaca 6610252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 6678842 - 6678880
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  6678842 acataataaaataattaaataaataactagggcgttaca 6678880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 12913018 - 12912980
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  12913018 acataataaaataattaaataaataactagggcgttaca 12912980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 14564873 - 14564911
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  14564873 acataataaaataattaaataaataactagggcgttaca 14564911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 14766951 - 14766989
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  14766951 acataataaaataattaaataaataactagggcgttaca 14766989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 22459448 - 22459486
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  22459448 acataataaaataattaaataaataactagggcgttaca 22459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 23900840 - 23900917
Alignment:
Q  186 ctgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||||||| || || ||||||||||   |||||| ||||||||||| |||||| ||| |||||||||| | ||||||    
T  23900840 ctgaccatcggtctggggatgataagtagaactcagcctcaacttagttcccaaagcagcttgcaaactttcccaaaa 23900917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 24353080 - 24353039
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  24353080 ttgctgtttgtttattaactaagctgcatgagtcggtctaag 24353039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 37116407 - 37116366
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  37116407 ttgctgtttgtttattaactaagctgcatgagtcggtctaag 37116366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 9204118 - 9204086
Alignment:
Q  142 taaaataattaaataaatagctagggcgttaca 174  Q
    ||||||||||||||||||| |||||||||||||    
T  9204118 taaaataattaaataaataactagggcgttaca 9204086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 24858 - 24762
Alignment:
Q  176 ttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| || ||||||||||| | ||||||||| |||||    
T  24858 ttctctccgactgaccatctgtttacggatgataagccgaactcaacctcaacttagatcccaacgcctcttgcaaacttttccaaaatctagaagt 24762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 3312 - 3411
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||| | |||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||    
T  3312 ctctccgactgaccatctgtctgaggatgataagacgaactcaacctcaacttcgaacccaaggcatcttgcaaactcttccaaaatctagaagtgaacc 3411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 6893 - 6987
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  6893 ctctccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 6987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 68; Significance: 3e-30; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 31931 - 32030
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||| |||||||||||||||||||||  ||||||||| |||||| || |||||||||||||||||||||| ||||||||| ||||||||||    
T  31931 ctctccgactgacaatctgtttgcggatgataagctgaactcaaccccaacttcgaacccaaggcatcttgcaaactcttccaaaatctagaagtgaacc 32030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 17962 - 18056
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| |||||||| || ||||| || ||||||||||||| ||||||||| |||||    
T  17962 ctctccgactgaccatctgtctgcggatgataagccgaactcaatctcaacttcgaacccaaagcctcttgcaaactcttccaaaatctagaagt 18056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 14560 - 14654
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||  | || || ||||||||||| | ||||||||| |||||    
T  14560 ctctccgactgagcatctgtttgcggctgatacgccgaactcaacctcaacttagaatctaaagcctcttgcaaacttttccaaaatctagaagt 14654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 68; Significance: 3e-30; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 101337 - 101238
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||| |||||||||||| | ||||||||||||||| |||||||||||||||| || ||||| |||||||||||||||| ||||||||||||||||||||    
T  101337 ctctctgactgaccatctatctgcggatgataagccgaactcaacctcaacttcgaacccaaagcatcttgcaaactcttccaaaatcttgaagtgaacc 101238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 180725 - 180814
Alignment:
Q  183 cgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||| ||| ||||||| ||| ||||||| ||||||||||| ||||| || ||||||||||| | ||||||||| |||||    
T  180725 cgactgaccatctgtctgctgatgatacgccgaactcaatctcaacttagaacccaaagcctcttgcaaactgttccaaaatctagaagt 180814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 15842 - 15898
Alignment:
Q  285 tgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    ||||||||  |||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  15842 tgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 15898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 26660 - 26762
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||||||||||| || |||||||||||||| || |||| |||||| ||||||||||    
T  26660 gttctctccgactgaccatctgtctgtggatgataagccgaactcaacctcaactttgaacccaaggcatcttgtaagctcttccaaaaccttgaagtga 26759  T
Q  275 acc 277  Q
    |||    
T  26760 acc 26762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 27042 - 27144
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||||||||||| || |||||||||||||| || |||| |||||| ||||||||||    
T  27042 gttctctccgactgaccatctgtctgtggatgataagccgaactcaacctcaactttgaacccaaggcatcttgtaagctcttccaaaaccttgaagtga 27141  T
Q  275 acc 277  Q
    |||    
T  27142 acc 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 47642 - 47744
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    |||||||| |||||||||| ||| ||||||||||||||| |||||||||||||||| || ||||| |||||||||||||||| ||||||||| |||||||    
T  47642 gttctctctgactgaccatttgtctgcggatgataagccgaactcaacctcaactttgaacccaatgcatcttgcaaactcttccaaaatctagaagtga 47741  T
Q  275 acc 277  Q
    |||    
T  47742 acc 47744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 51651 - 51549
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||| || ||||| |||||||||||||||| |||||||||  ||||||    
T  51651 gttctctccgactaaccatctgtttgcggatgataagccgaactcaaccttaactttgaacccaatgcatcttgcaaactcttccaaaatctaaaagtga 51552  T
Q  275 acc 277  Q
    |||    
T  51551 acc 51549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 619 - 718
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||| |||||||||||| || |||||||||||| |||||||||||||||| || ||||||||||||||||| |||| ||||||||| ||||||||||    
T  619 ctctccgtctgaccatctgtctgaggatgataagccgaactcaacctcaactttgaacccaaggcatcttgcaagctcttccaaaatctagaagtgaacc 718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 20504 - 20603
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||| | ||||||| |||||||||||| || |||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||    
T  20504 ctctccgactaaacatctgtctgcggatgataaaccgaactcaacctcaacttcgaacccaaggcatcttgcaaactcttccaaaatctagaagtgaacc 20603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 13146 - 13047
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| ||  |||| |||||||| || |||| ||||||| | ||| ||||||    
T  13146 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaatccaatgcatcttgtaagctcttccaaaatttagaaatgaacc 13047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 16914 - 16817
Alignment:
Q  180 ctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||| || |||||||||||| |||||||||||||||| ||  |||| |||||||| || |||| ||||||| | ||| ||||||    
T  16914 ctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaatccaatgcatcttgtaagctcttccaaaatttagaaatgaacc 16817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 42118 - 42019
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| |||||||||||||||| ||| ||||| ||||||||||    
T  42118 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaacccaaagcatcttgcaaactcttccagaatctagaagtgaacc 42019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 2439 - 2530
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | || || || ||||||| ||||| |||||||||    
T  2439 gttctctccgactgaccatctgtttgcggatgatacgccgaactcaacctcaacttacaacctaaagcctcttgcacactcttccaaaatct 2530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 47184 - 47085
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| |||||| ||||||||| || ||||| || ||||||||||||| ||| || || ||||||||||    
T  47184 ctctccgactgaccatctgtctgcggatgataagccgaactcagcctcaacttcgaacccaaagcgtcttgcaaactcttccagaacctagaagtgaacc 47085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 64; Significance: 6e-28; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 90717 - 90618
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||    |||||| ||||||||||||||| ||||||||| ||||||||||    
T  90717 ctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaacttcacacccaagccatcttgcaaactcttccaaaatctagaagtgaacc 90618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 114703 - 114800
Alignment:
Q  180 ctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| ||||||||||| |||| ||||||||| ||||||||||    
T  114703 ctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaacccaatgcatcttgcaagctcttccaaaatctagaagtgaacc 114800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 272
Target Start/End: Complemental strand, 390988 - 390891
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  390988 gttctttccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 390891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 277
Target Start/End: Complemental strand, 89982 - 89940
Alignment:
Q  235 cccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||    
T  89982 cccaagccatcttgcaaactcttccaaaatctagaagtgaacc 89940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 1312 - 1210
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||| |||||| || ||||| ||||||||||| |||| ||||||||| |||||||    
T  1312 gttctctccgactgaccatctgtctgaggatgataagccgaactcaaccacaacttcgaacccaaagcatcttgcaagctcttccaaaatctagaagtga 1213  T
Q  275 acc 277  Q
    |||    
T  1212 acc 1210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 6544 - 6643
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||| ||  ||||||||||||||||||| || || || || |||||||| | ||||||||| ||||| ||||    
T  6544 ctctccgactgaccatctgtctgcggatgatacgctgaactcaacctcaacttagaacctaaagcctcatgcaaacttttccaaaatctagaagtaaacc 6643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 33465 - 33363
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||| || || ||||| |||||||||||||||| ||| ||||| |||||||    
T  33465 gttctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaatttcgagcccaaagcatcttgcaaactcttccagaatctagaagtga 33366  T
Q  275 acc 277  Q
    |||    
T  33365 acc 33363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 40803 - 40864
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  40803 ggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 40864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 17880 - 17977
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaa 275  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||| ||||| || | ||| |||||||||||||||| ||||||||| ||||||||    
T  17880 ctctccgactgaccatctgtctgcggatgataagccgaactcaaccttaactttgaactcaatgcatcttgcaaactcttccaaaatctagaagtgaa 17977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 272
Target Start/End: Complemental strand, 32540 - 32443
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| || || || ||||||||||||| ||||||||| |||||    
T  32540 gttctctccgactgaccatctgtctgtggatgatacgccaaactcaacctcaacttagaacctaaagcttcttgcaaactcttccaaaatctagaagt 32443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 6705 - 6804
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||| || || ||||| ||||||||  |||||| ||||||||| ||||||||||    
T  6705 ctctccgactgaccatctgtctgcggatgataagccgaactcaacctcaatttcgaacccaacgcatcttgtgaactcttccaaaatctagaagtgaacc 6804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 189 - 90
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| |||||||| ||||||| ||||||||| || |||||||    
T  189 ctctccgactgaccatctgtctgtggatgataagccgaactcaacctcaacttcgaacccaaagcatcttgtaaactcttccaaaatctagaggtgaacc 90  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 11411 - 11508
Alignment:
Q  180 ctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||| || |||||||||||| |||||||||||||||| ||  |||| |||||||| || |||| ||||||| | ||| ||||||    
T  11411 ctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaatccaatgcatcttgtaagctcttccaaaatttagaaatgaacc 11508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 7595 - 7510
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||||| ||| ||||| || || ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  7595 ctctccgtctgcccatcggtctgaggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 7510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 37723 - 37822
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||||||||||||||| ||  |||| ||||||||||| || |||||||||||||| || |||| |||||| |||||||||||||    
T  37723 ctctccgactgaccatctgtttgcggatgataggctgaactgaacctcaactttgaacccaaggcatcttgtaagctcttccaaaaccttgaagtgaacc 37822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 5082 - 4984
Alignment:
Q  179 tctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||| |||||||||||||| ||||||||||||||| |||| ||||||||||| || ||||| |||||||||||||||| ||| ||||| ||||||||||    
T  5082 tctcagactgaccatctgtctgcggatgataagccgaacttaacctcaacttcgaacccaaagcatcttgcaaactcttccagaatctagaagtgaacc 4984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 1760 - 1658
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||| || | ||| |||||||||||||||| |||||| || |||||||    
T  1760 gttctctccgactgaccatctgtctgcggatgatatgccgaactcaacttcaactttgaactcaatgcatcttgcaaactcttccaaaacctcgaagtga 1661  T
Q  275 acc 277  Q
    |||    
T  1660 acc 1658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 21455 - 21357
Alignment:
Q  179 tctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||| |||||||| |||||||||||| |||||||||||||||| || ||||| ||||||||||| |||| ||| ||||| ||||||||||    
T  21455 tctccgactgaccgtctgtttgaggatgataagccgaactcaacctcaacttcgaacccaatgcatcttgcaagctcttccagaatctagaagtgaacc 21357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 19123 - 19217
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||| ||||| || ||||||||||||| ||||||||| |||||    
T  19123 ctctccgactgaccatctgtctgcggatgatacgccgaactcaatctcaacttagaacccaaagcctcttgcaaactcttccaaaatctagaagt 19217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 50014 - 50108
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  50014 ctctccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 50108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 59; Significance: 6e-25; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 130669 - 130763
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  130669 ctctccgactgaccatctgtttgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 130763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 4242 - 4151
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    ||||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||||| |||||||||    
T  4242 gttctctccaactgaccatctgtgtgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatct 4151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 29163 - 29071
Alignment:
Q  179 tctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaag 271  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||| ||||| || ||||||||||| | ||||||||| ||||    
T  29163 tctccgactgaccatctgtctgcggatgatacgccgaactcaatctcaacttagaacccaaagcctcttgcaaacttttccaaaatctagaag 29071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 59287 - 59369
Alignment:
Q  190 ccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||| ||||||||||| ||| ||||||| ||||||||||| ||||| || || |||||||||| ||||||||| |||||    
T  59287 ccatctgtctgcggatgatacgccgaactcaaactcaacttagaacccaacgcctcctgcaaactctcccaaaatctagaagt 59369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 1517 - 1614
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||| || || || ||||||||||||| ||||||||| |||||    
T  1517 gttctctccgactgaccatctgtctgcggatgatacgccgaactaaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagt 1614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 12628 - 12587
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaag 322  Q
    |||||||||||||||||||||||||| ||||||| |||||||    
T  12628 ttgctgtttgtttattaactaagctacatgagtcggtctaag 12587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 26315 - 26219
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||||| ||||||||| ||||| ||||    
T  26315 tccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagtaaacc 26219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 195488 - 195390
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||| |||||||||| || ||||| |||||| |||||||||||||||| || ||||| |||| ||||||||||| ||||||||||||||||||||    
T  195488 ctctccgac-gaccatctgtctgaggatggtaagccgaactcaacctcaacttcgaacccaatgcatgttgcaaactcttccaaaatcttgaagtgaacc 195390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 149094 - 149190
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||| | || |||||||||||| ||||||||  |||||| || ||||| |||||||||| ||||| ||||||||| ||||||||||    
T  149094 tccgactgaccatctttctgaggatgataagccgaactcaactccaacttcgaacccaatgcatcttgcagactcttccaaaatctagaagtgaacc 149190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 5271 - 5370
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||| |||||||||   |||||||||||||||| || ||||| ||||||||||| |||| ||||||||| ||||||||||    
T  5271 ctctccgactgaccatctgtctgcagatgataagttgaactcaacctcaacttcgaacccaatgcatcttgcaagctcttccaaaatctagaagtgaacc 5370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 25650 - 25551
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||| ||| |||||||||| || |||||||||||| |||||||||||||||| |||||||| ||||||||||| |||| ||| ||||| ||||||||||    
T  25650 ctctctgaccgaccatctgtctgaggatgataagccgaactcaacctcaacttcgatcccaaagcatcttgcaatctcttccataatctagaagtgaacc 25551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 3272 - 3371
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||| ||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| |||| ||||| ||||| ||||||||| ||||||||||    
T  3272 ctcttcgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaacccaatgcattttgcagactcttccaaaatctagaagtgaacc 3371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 7460 - 7554
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  7460 ctctccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 7554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 13008 - 13102
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  13008 ctctccgactgaccatctgtctgcggatgataagccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 13102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 217 - 311
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || |  ||||||||||||| ||||||||| |||||    
T  217 ctctccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaaggctcttgcaaactcttccaaaatctagaagt 311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 41440 - 41539
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| ||||||||||||||| |||  ||||||||||| || ||||| || ||||||||||||| ||| ||||| ||||||||||    
T  41440 ctctccgactgaccatctgtctgcggatgataagccgaac--aacctcaacttcgaacccaaagcgtcttgcaaactcttccagaatctagaagtgaacc 41537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 25495 - 25589
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||  ||||||||||| ||| ||||||| ||||||||||| ||||| || ||||||||||||| ||||||||| |||||    
T  25495 ctctccgactgaccatctgcctgcggatgatacgccgaactcaatctcaacttagaacccaaagcctcttgcaaactcttccaaaatctagaagt 25589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 15395 - 15497
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||||||| || |||||||| | | ||||||||||||||||||| || || || ||||||||||||| ||||||||| ||||| |    
T  15395 gttctctccgactgaccatctgtctgaggatgatatgtcgaactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagtaa 15494  T
Q  275 acc 277  Q
    |||    
T  15495 acc 15497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 113275 - 113184
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatct 266  Q
    |||||||| |||||||||||||| ||||||||| | ||| ||||||||||||||||||| || || || ||||||||||||| |||||||||    
T  113275 gttctctctgactgaccatctgtctgcggatgacacgccgaactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatct 113184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 116685 - 116591
Alignment:
Q  183 cgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||||| ||||||||| ||||| ||||    
T  116685 cgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagtaaacc 116591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 98560 - 98620
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaa 262  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| |||||    
T  98560 ggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaa 98620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 63816 - 63722
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||| ||||  || ||||||||||||| ||||||||| |||||    
T  63816 ctctccgactgaccatctgtctgcggatgatacgccgaactcaatctcaacttagaacccagagcctcttgcaaactcttccaaaatctagaagt 63722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 15457 - 15551
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||| |||||||| |||||||| || ||||||||||| | ||||||||| |||||    
T  15457 ctctccgactgaccatctgtttgtggatgatacgccgaactcaatctcaacttcgatcccaaagcctcttgcaaacttttccaaaatctagaagt 15551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 50302 - 50200
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    |||||||||||||||||||| || || |||||||||||| ||||||||||||| || || ||||| |||||||| ||||||| ||| ||||| |||||||    
T  50302 gttctctccgactgaccatccgtctgaggatgataagccgaactcaacctcaatttcgagcccaaagcatcttggaaactcttccagaatctagaagtga 50203  T
Q  275 acc 277  Q
    |||    
T  50202 acc 50200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 8995 - 9089
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  8995 ctctccgactgaccatctgtttgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 9089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 43675 - 43769
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  43675 ctctccgactgaccatctgtctgtggatgataagccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 43769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 219205 - 219103
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||| ||||||||||||||| |||||||||||  || ||||||||||||||||||| || || || ||||||||||||| ||||||||| ||||| |    
T  219205 gttctcttcgactgaccatctgtctgcggatgataccccgaactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagtaa 219106  T
Q  275 acc 277  Q
    |||    
T  219105 acc 219103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 229561 - 229640
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaact 254  Q
    ||||| ||||||||||||| ||| |||| |||||| ||| |||||||||| |||||||| || ||  | |||||||||||    
T  229561 gttctttccgactgaccatttgtctgcgaatgatacgccgaactcaaccttaacttagaacctaaatcctcttgcaaact 229640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 54; Significance: 6e-22; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 16173 - 16270
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||||||||| || |||||||| ||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  16173 gttctctccgactgaccatctgtctgaggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 16270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 6667 - 6611
Alignment:
Q  285 tgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    ||||||||  |||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  6667 tgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 6611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 14047 - 13991
Alignment:
Q  285 tgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    ||||||||  |||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  14047 tgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 13991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 7915 - 8012
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  7915 gttctctccgactgaccatctgtttgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 8012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 28556 - 28479
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaa 252  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| || |||||||||    
T  28556 gttctctccaactgaccatctgtttgcggatgataagccgaactcaaccccaacttagaacccaacgcctcttgcaaa 28479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 40547 - 40470
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaa 252  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| || |||||||||    
T  40547 gttctctccaactgaccatctgtttgcggatgataagccgaactcaaccccaacttagaacccaacgcctcttgcaaa 40470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 12567 - 12471
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| || || |||||||||| ||||||||| || |||||||    
T  12567 tccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgcaaactcttccaaaatctagatgtgaacc 12471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 4552 - 4651
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||| |||||||||| ||||||||||| ||| ||||||||||||||||| | || || || ||||||||||||| ||||||||| ||||| ||||    
T  4552 ctctccgaccgaccatctgtctgcggatgatacgccgaactcaacctcaacttataacctaaagcctcttgcaaactcttccaaaatctagaagtaaacc 4651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 10528 - 10449
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaact 254  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| |||||||| || ||||| || |||||||||||    
T  10528 gttctctccgactgaccatctgtttgcggatgataagctgaactcaatctcaactttgaacccaacgcctcttgcaaact 10449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 1049 - 1148
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| |  |||||||||||| |||||||||||||||| || ||||| ||||||||||| |||| ||  ||||| ||||||||||    
T  1049 ctctccgactgaccatctgtctaaggatgataagccgaactcaacctcaacttcgaacccaatgcatcttgcaagctcttcctgaatctagaagtgaacc 1148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 5237 - 5138
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| || |||||  |||| |||||||||| ||| || || ||||||||||    
T  5237 ctctccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaacccaaaacatcctgcaaactcttccagaacctagaagtgaacc 5138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 26782 - 26881
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  26782 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 26881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 16498 - 16399
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  16498 ctctccgactgaccatctgtttgaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 16399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 43304 - 43403
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||  ||| ||| |||||||| |||||||||||||||| ||| || || ||||||||||    
T  43304 ctctccgactgaccatctgtctgtggatgataagccgaactcaaattcagcttcgatcccaaagcatcttgcaaactcttccagaacctagaagtgaacc 43403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 419 - 509
Alignment:
Q  187 tgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||| ||||| ||||| ||||||||||||| ||| |||||  |||||||||    
T  419 tgaccatctgtgtgcggatgataagccgaactcagcctcaacttcgatcctaaggcgtcttgcaaactcttccagaatctataagtgaacc 509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 4884 - 4790
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| | ||||||||| ||||| || ||||||||||||| ||||||||| |||||    
T  4884 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatcccaacttagaacccaaagcctcttgcaaactcttccaaaatctagaagt 4790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 147 - 86
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  147 ggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 86  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 1988 - 2082
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||| ||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  1988 ctctccgactaaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 2082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 9864 - 9958
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||| ||||||||||||||||||| ||  ||||||||||||||||||| |  || || ||||||||||||| ||||||||| |||||    
T  9864 ctctccgactgatcatctgtttgcggatgatacgctgaactcaacctcaacttagaacgtaaagcctcttgcaaactcttccaaaatctagaagt 9958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 16204 - 16102
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||||||||||||||||| ||| ||||||||||| ||| |||| |||||||||||||| || || || | ||||||||||| ||||||||| ||||| |    
T  16204 gttctctccgactgaccatttgtctgcggatgatacgccgaacttaacctcaacttagaacctaaagcctattgcaaactcttccaaaatctagaagtaa 16105  T
Q  275 acc 277  Q
    |||    
T  16104 acc 16102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 25507 - 25405
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||| || |||||||||||||| | ||||||||| ||| ||||||||||||||||||| || || || ||||||||||||| ||||||||| ||||| |    
T  25507 gttctttcagactgaccatctgtctccggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagtaa 25408  T
Q  275 acc 277  Q
    |||    
T  25407 acc 25405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 23944 - 23989
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttga 326  Q
    ||||||||||||  |||||||||||| ||||||| |||||||||||    
T  23944 ttgctgtttgttatttaactaagctacatgagtcggtctaagttga 23989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 3658 - 3760
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||| ||||||||||||| ||| ||| ||||||| ||| ||||||||||||||||||| || || || ||||||||||||| ||||||||| ||||| |    
T  3658 gttctttccgactgaccatttgtctgcagatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagtaa 3757  T
Q  275 acc 277  Q
    |||    
T  3758 acc 3760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 1141 - 1235
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| || ||||||||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  1141 ctctccgactgaccatctgtctgcggatgatacgccgaattcaacctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 1235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 14881 - 14975
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||||||||  | ||||| || ||||||||||| | ||||||||| |||||    
T  14881 ctctccgactgaccatctgtctgcggatgataagccgaactcaatctcaacttcaaacccaaagcctcttgcaaacttttccaaaatctagaagt 14975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 197263 - 197169
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||| |||||||||| ||||||||||| ||| ||||||| ||||||||||| || || || ||||||||||||| ||||||||| |||||    
T  197263 ctctccgaccgaccatctgtctgcggatgatacgccgaactcaatctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagt 197169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 278615 - 278521
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||| ||||| ||||| || ||||| ||||||||||||| |||||| || |||||    
T  278615 ctctccgactgaccatctgtctgcggatgatacgccgaactcaatctcaatttagaaccgaaggcctcttgcaaactcttccaaaacctagaagt 278521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 260832 - 260928
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| || || |||||||||| ||| || || || |||||||    
T  260832 tccgactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgcaaactcttccagaacctagaggtgaacc 260928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 7021 - 6924
Alignment:
Q  180 ctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||| ||||||||||||||| ||| || ||||||||| || ||||| || |||||||||||||  || ||||| ||||||||||    
T  7021 ctccgactgaccatctgtctgcggatgataagccgaacgcagcctcaacttcgaacccaaagcgtcttgcaaactctttcagaatctagaagtgaacc 6924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 18992 - 18891
Alignment:
Q  176 ttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaa 275  Q
    |||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||| |  || || |||| |||||||| ||||||||| ||||| ||    
T  18992 ttctctccgactgaccatctgtctgcggatgatacgccgaacgcaacctcaacttagaacttaaagcctctttcaaactcttccaaaatctagaagtaaa 18893  T
Q  276 cc 277  Q
    ||    
T  18892 cc 18891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 3138 - 3041
Alignment:
Q  180 ctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||| ||||||||||||||| |||||| ||||||||| || ||||| || || |||||||||| ||| |||||  |||||||||    
T  3138 ctccgactgaccatctgtctgcggatgataagccgaactcagcctcaacttcgaacccaaagcgtcatgcaaactcttccagaatctataagtgaacc 3041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 22390 - 22482
Alignment:
Q  180 ctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||| ||||||||||||||| |||||||  ||||||| || || || || ||||||||||||| ||||||||| |||||    
T  22390 ctccgactgaccatctgtctgcggatgataagccgaactcaatttcaacttcgaacctaaagcctcttgcaaactcttccaaaatctagaagt 22482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 4187 - 4096
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||| ||||||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  4187 tccgactgaccatctgtctgcggatgatatgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 4096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 11290 - 11389
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||| ||||||||||| || ||||| || || |||||||||| ||| || || ||||||||||    
T  11290 ctctccgactgaccatctgtctgaggatgataagccgaactgaacctcaacttcgaacccaaagcgtcctgcaaactcttccagaacctcgaagtgaacc 11389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 9120 - 9211
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||||||| ||||||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  9120 tccgactgaccatctgtctgcggatgatatgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 9211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 33355 - 33264
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||| |||||||||||| ||||||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  33355 tccggctgaccatctgtctgcggatgatatgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 33264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 48992 - 48893
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  48992 ctctccgactgaccatctgtctgtggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 48893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 51965 - 51866
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| |  |||||||||||| |||||||||||||||| || ||||| || || || ||||||| ||| ||||| ||||||||||    
T  51965 ctctccgactgaccatctgtctaaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgtaaactcttccagaatctagaagtgaacc 51866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 60999 - 60900
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| |  |||||||||||| |||||||||||||||| || ||||| || || || ||||||| ||| ||||| ||||||||||    
T  60999 ctctccgactgaccatctgtctaaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgtaaactcttccagaatctagaagtgaacc 60900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 67387 - 67288
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| |  |||||||||||| |||||||||||||||| || ||||| || || || ||||||| ||| ||||| ||||||||||    
T  67387 ctctccgactgaccatctgtctaaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgtaaactcttccagaatctagaagtgaacc 67288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 68376 - 68277
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||| |||| || ||||||||| || |||| |||||||| || ||||||   ||||||||||||| |||||| |||||||||||||    
T  68376 ctctccgactgaccatctatttgtgggtgataagccgaagtcaatctcaactttgaacccaagttctcttgcaaactcttccaaaaccttgaagtgaacc 68277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 263
Target Start/End: Original strand, 46684 - 46760
Alignment:
Q  187 tgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||||||| || || ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  46684 tgaccatcggtatgaggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 46760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 1434 - 1528
Alignment:
Q  183 cgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||| ||||||||| |||||||||||  || |||||||| |||||||||| ||||| || ||||||||||||| ||||||||| ||||| ||||    
T  1434 cgactaaccatctgtctgcggatgatacaccgaactcaacttcaacttagaacccaaagcctcttgcaaactcttccaaaatctagaagtaaacc 1528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 9488 - 9590
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||| |||||||||| |||||| ||||||||||| ||| |||| ||||| |||||||| || || || ||||||||||||| ||||||||| ||||| |    
T  9488 gttctttccgactgacaatctgtctgcggatgatatgccgaacttaacctaaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagtaa 9587  T
Q  275 acc 277  Q
    |||    
T  9588 acc 9590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 115 - 54
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||||||||||  |||||||||||||||||| |||||| ||| |||||||||||| ||||||    
T  115 ggatgataagcagaactcaacctcaacttagttcccaaagcagcttgcaaactctcccaaaa 54  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 9868 - 9782
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaat 264  Q
    |||||||||||||||| ||| ||||||||||||||| |||||||||| || || || ||||| |||||||| ||||||| |||||||    
T  9868 ctctccgactgaccatatgtctgcggatgataagccgaactcaaccttaattttgaacccaatgcatcttgtaaactcttccaaaat 9782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 277
Target Start/End: Original strand, 12057 - 12114
Alignment:
Q  220 aacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||| || || || ||||||||||||| ||||||||| ||||| ||||    
T  12057 aacctcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagtaaacc 12114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 7887 - 7981
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||| ||||||||||||||| |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  7887 ctctccgcctgaccatctgtttgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 7981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 14867 - 14765
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    |||||||||||||||||||||||  |||| ||||| ||| ||||||||||||||||||| || ||  | ||||||||||| | ||||||||| ||||| |    
T  14867 gttctctccgactgaccatctgtccgcgggtgatacgccgaactcaacctcaacttagaacctaaatcctcttgcaaacttttccaaaatctagaagtaa 14768  T
Q  275 acc 277  Q
    |||    
T  14767 acc 14765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 6570 - 6664
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||| |||| ||||||||||||| ||| |||||||||||||||||||  | || || ||||||||||| | ||||||||| |||||    
T  6570 ctctccgactgactatctatttgcggatgatatgccgaactcaacctcaacttagaatctaaagcctcttgcaaacttttccaaaatctagaagt 6664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 608 - 514
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| ||| ||||||| ||| ||||||| ||||||||||| ||||| || |||| |||||| | ||||||||| |||||    
T  608 ctctccgactgaccatctgtctgctgatgatacgccgaactcaatctcaacttagaacccaaagcctctttcaaacttttccaaaatctagaagt 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 479 - 385
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| |||||||||||  || |||||||||||| |||||| || || || ||||||||||| | ||||||||| |||||    
T  479 ctctccgactgaccatctgtctgcggatgatacaccgaactcaacctcagcttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 19642 - 19740
Alignment:
Q  179 tctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||| || |||| ||||||| |||||||||||||||| || ||||| || || |||||||||| ||| || || ||||||||||    
T  19642 tctccgactgaccatctgtctgaggatcataagccgaactcaacctcaacttcgaacccaaagcgtcctgcaaactcttccagaacctagaagtgaacc 19740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 47; Significance: 9e-18; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 109596 - 109502
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  109596 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcgtcttgcaaacttttccaaaatctagaagt 109502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 95784 - 95688
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||| || ||||||||||||||| ||||||||||||| || || ||||| |||||||| |||||   ||||||||| ||||| ||||    
T  95784 tccgactgaccatcagtctgcggatgataagccgaactcaacctcaatttcgaacccaacgcatcttgtaaacttctccaaaatctcgaagtaaacc 95688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 113087 - 113179
Alignment:
Q  185 actgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||| | || |||||||||||| |||||| |||||| || || ||||| |||||||||||||||| ||| ||||| || |||||||    
T  113087 actgaccatctttctgaggatgataagccgaactcagcctcaatttcgagcccaaagcatcttgcaaactcttccagaatctagatgtgaacc 113179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 80279 - 80185
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||| |||||||||||  |||||||||| ||| ||||||| ||||||||||| ||||| || |||| |||||||| |||||||||| ||||    
T  80279 ctctccgaatgaccatctgtccgcggatgatacgccgaactcaatctcaacttagaacccaaagcctctttcaaactcttccaaaatctttaagt 80185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 126987 - 126929
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttaga 233  Q
    ||||| ||||||||||||||||| ||||||||||| |   |||||||||||||||||||    
T  126987 gttctttccgactgaccatctgtctgcggatgatacgttgaactcaacctcaacttaga 126929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 3599 - 3510
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatctt 267  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| ||||||||||| ||||| || ||||| ||||| | ||||||||||    
T  3599 ctctccgactgaccatctgtctgtggatgatacgccgaactcaatctcaacttagaacccaaagcctcttgtaaacttttccaaaatctt 3510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 1016 - 925
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||| ||||||||||| ||||||||||||||| |||||||  |||| || || ||||| |||||||| ||||||| |||||||||| ||||    
T  1016 tccgaatgaccatctgtctgcggatgataagccgaactcaatttcaatttcgaacccaacgcatcttgtaaactcttccaaaatcttcaagt 925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 33104 - 33005
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||||| || |||||||||| | |||||||||||||||| || |||||  |||| |||||||||| ||| || || || |||||||    
T  33104 ctctccgactgaccatctgtctgaggatgataagtcgaactcaacctcaacttcgaacccaaatcatcctgcaaactcttccagaacctagaggtgaacc 33005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 65933 - 66020
Alignment:
Q  185 actgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||| || || ||||| || ||||||||||| | ||||||||| |||||    
T  65933 actgaccatctgtctgcggatgataagccgaactcaatctcaatttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 66020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 39604 - 39511
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||||| |||||| || |||||||| ||| ||||||| || |||||||| ||||| || ||||||||||| | | ||||||| |||||    
T  39604 ctctccgactgac-atctgtctgtggatgatacgccgaactcaatcttaacttagaacccaaagcctcttgcaaacttttcgaaaatctagaagt 39511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 6535 - 6629
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||| ||||||||| | ||||||||| ||| ||| ||| ||||||||||| ||||| || ||||||||||||| ||||| ||| |||||    
T  6535 ctctccgactaaccatctgtctacggatgatacgccgaacacaatctcaacttagaacccaaagcctcttgcaaactcttccaaattctagaagt 6629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 935 - 1029
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||| ||||||| || |||||||| ||| ||||||| |||||||| || ||||| || ||||||||||| | ||||||||| |||||    
T  935 ctctccgactgatcatctgtctgtggatgatacgccgaactcaatctcaacttcgaacccaaagcctcttgcaaacttttccaaaatctagaagt 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 12765 - 12663
Alignment:
Q  175 gttctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtga 274  Q
    ||||| ||||||||||||||| | ||||||||||| ||  |||| ||| |||||||||| || || || ||||||||||||| ||||||||| ||||| |    
T  12765 gttctttccgactgaccatctatctgcggatgatacgctgaactgaacatcaacttagaacctaaagcctcttgcaaactcttccaaaatctagaagtaa 12666  T
Q  275 acc 277  Q
    |||    
T  12665 acc 12663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 19783 - 19693
Alignment:
Q  182 ccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || || || |||| |||||| | ||| ||||| |||||    
T  19783 ccgactgaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctctttcaaacttttccataatctagaagt 19693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 8311 - 8405
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||||| | || ||||| || ||||||||||| | |||||| || |||||    
T  8311 ctctccgactgaccatctgtctgtggatgataagccgaactcaatctcaacatcgaacccaaagcctcttgcaaacttttccaaaaactagaagt 8405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 249134 - 249212
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactct 256  Q
    ||||| |||||||||||||| || |||||||||||| |||||||||||||||| || ||||| || || ||||||||||    
T  249134 ctctcagactgaccatctgtctgaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgcaaactct 249212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 195 - 267
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaac 253  Q
    ||||||| ||||||||| ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||    
T  195 tccgactaaccatctgtctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaac 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 6120 - 6021
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||||| | || |||||||||||| |||||||||||||||| || ||||| || || || ||||||  ||| || || ||||||||||    
T  6120 ctctccgactgaccatctatctgaggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgtaaactcatccagaacctagaagtgaacc 6021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 44026 - 44125
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||| | | || |||||||||||| |||||||||||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  44026 ctctccgactgaccatgtatctgaggatgataagccgaactcaacctcaacttcgaccccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 44125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 45038 - 45137
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||||||| | | || |||||||||||| |||||||||||||||| || ||||| || || || ||||||| ||| || || ||||||||||    
T  45038 ctctccgactgaccatgtatctgaggatgataagccgaactcaacctcaacttcgaccccaaagcgtcctgtaaactcttccagaacctagaagtgaacc 45137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 276
Target Start/End: Original strand, 19370 - 19468
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaac 276  Q
    |||| ||||||| ||||||| || |||||||||||| |||||| |||||| || || ||||  |||||||||||||||| | | ||||| |||||||||    
T  19370 ctcttcgactgatcatctgtctgaggatgataagccgaactcagcctcaatttcgaacccagagcatcttgcaaactcttctagaatctagaagtgaac 19468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 276
Target Start/End: Original strand, 23532 - 23630
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaac 276  Q
    |||| ||||||| ||||||| || |||||||||||| |||||| |||||| || || ||||  |||||||||||||||| | | ||||| |||||||||    
T  23532 ctcttcgactgatcatctgtctgaggatgataagccgaactcagcctcaatttcgaacccagagcatcttgcaaactcttctagaatctagaagtgaac 23630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 5742 - 5836
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||| || |||||| | | ||||||| ||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  5742 ctctccgactaacaatctgtctacagatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 5836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0894 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 2916 - 2989
Alignment:
Q  199 tgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||| | ||||||||| |||||    
T  2916 tgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttccaaaatctagaagt 2989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 1791 - 1880
Alignment:
Q  183 cgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||| |||||||| | ||||||||||| ||| ||||||||||||||||||| || || || ||||||||||| |  |||||||| |||||    
T  1791 cgacagaccatctatctgcggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgcaaacttttacaaaatctagaagt 1880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 15201 - 15262
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||| |||||  |||||||||||||||||| |||||||||| |||||||||||| ||||||    
T  15201 ggatggtaagcagaactcaacctcaacttagttcccaaggcagcttgcaaactctcccaaaa 15262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 44083 - 44144
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  44083 ggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 44144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 272
Target Start/End: Original strand, 1203 - 1291
Alignment:
Q  184 gactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||| ||| || |||||||| ||||||||||| ||||||||||| || || || || |||||||| | ||||||||| |||||    
T  1203 gactgaccatatgtctgaggatgatacgccaaactcaatctcaacttagaacctaaagcctcctgcaaacttttccaaaatctagaagt 1291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 263
Target Start/End: Complemental strand, 3695 - 3619
Alignment:
Q  187 tgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||||||| || || ||||||||||| ||||||| ||||||||||| |||||| ||  |||||||||||| ||||||    
T  3695 tgaccatcagtctgaggatgataagcaaaactcagcctcaacttagttcccaaagctgcttgcaaactctcccaaaa 3619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 81593 - 81518
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||| |||||||||||||||| || ||||| || || ||||| |||| ||||||||| || |||||||    
T  81593 ggatgataagccgaactcaacctcaacttcgaacccaaagcgtcctgcaagctcttccaaaatctagatgtgaacc 81518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 3703 - 3764
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||||||||||  |||||||| ||||||||| |||||| ||| |||||||||||| ||||||    
T  3703 ggatgataagcagaactcaacgtcaacttagttcccaaagcagcttgcaaactctcccaaaa 3764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 7701 - 7774
Alignment:
Q  190 ccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||||||| || |||||||||||  ||||||| ||||| |||| |||||| ||| |||||||||||| ||||||    
T  7701 ccatctgtctggggatgataagcagaactcaatctcaaattagttcccaaagcagcttgcaaactctcccaaaa 7774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 11201 - 11262
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||||||||||  |||||||||||||||||| |||||| ||| ||| |||||||| ||||||    
T  11201 ggatgataagcagaactcaacctcaacttagttcccaaagcagcttacaaactctcccaaaa 11262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 263
Target Start/End: Original strand, 23915 - 24000
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||||| ||| ||||| || || ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  23915 ctctccgtctgcccatcggtctgaggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 24000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 25166 - 25121
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttga 326  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||    
T  25166 ttgctgtttgtttattaactaagctgcatgagtcggtctaagttga 25121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 33174 - 33113
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||||||||||  |||||||||||||||||| |||||| ||| |||||||||| | ||||||    
T  33174 ggatgataagcagaactcaacctcaacttagttcccaaagcagcttgcaaactttcccaaaa 33113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 3636 - 3561
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||| | ||||| ||||    
T  3636 ggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaatttagaagtaaacc 3561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 232102 - 232177
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    |||||||||||  |||||||||| ||||||| |||||| ||| ||||||||||||  |||||| | ||||| ||||    
T  232102 ggatgataagcagaactcaaccttaacttagttcccaaagcagcttgcaaactcttgcaaaatatagaagtaaacc 232177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 610 - 560
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttgatttat 331  Q
    |||||||||||||||||||||||||  ||||||| ||||||| ||| ||||    
T  610 ttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaattat 560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 2619 - 2657
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttaca 174  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  2619 acataataaaataattaaataaataactagggcgttaca 2657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 8113 - 8020
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagt 272  Q
    |||||||||||||||| | | |  |||||||| ||| ||||||||||||||||||| || || || |||||| |||| | ||||||||| |||||    
T  8113 ctctccgactgaccatttttctttggatgatacgccgaactcaacctcaacttagaacctaaagcctcttgc-aacttttccaaaatctagaagt 8020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 5699 - 5781
Alignment:
Q  181 tccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    |||| ||| ||||| || || ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  5699 tccgtctgcccatcagtctgaggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 5781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 4429 - 4491
Alignment:
Q  215 aactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||| || || || ||||||||||||| ||||||| | ||||| ||||    
T  4429 aactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatatagaagtaaacc 4491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 11559 - 11621
Alignment:
Q  215 aactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaatcttgaagtgaacc 277  Q
    ||||||||||||||||||| || || || ||||||||||||| ||||||| | ||||| ||||    
T  11559 aactcaacctcaacttagaacctaaagcctcttgcaaactcttccaaaatatagaagtaaacc 11621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 28051 - 27973
Alignment:
Q  178 ctctccgactgaccatctgtttgcggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactct 256  Q
    ||||||| ||| ||||| || || ||||| |||||  |||||||||||||||||| |||||| ||| |||| |||||||    
T  28051 ctctccgtctgcccatcggtctggggatggtaagcagaactcaacctcaacttagttcccaaagcagcttgtaaactct 27973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 815 - 754
Alignment:
Q  202 ggatgataagccaaactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||| |||||  ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  815 ggatggtaagcagaactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 9643 - 9602
Alignment:
Q  136 acatagtaaaataattaaataaatagctagggcgttacagtt 177  Q
    ||||| ||||||||||||||||| | ||||||||||||||||    
T  9643 acataataaaataattaaataaacaactagggcgttacagtt 9602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 326
Target Start/End: Original strand, 16165 - 16206
Alignment:
Q  285 tgtttgtttattaactaagctatatgagtctgtctaagttga 326  Q
    |||||||||||||||||||||  ||||||| |||||||||||    
T  16165 tgtttgtttattaactaagctgcatgagtcggtctaagttga 16206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 6187 - 6244
Alignment:
Q  284 ctgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    |||||||||  |||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  6187 ctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 6244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 8135 - 8180
Alignment:
Q  281 ttgctgtttgtttattaactaagctatatgagtctgtctaagttga 326  Q
    ||||||||||||| |||||||||||  ||||||| |||||||||||    
T  8135 ttgctgtttgtttgttaactaagctgcatgagtcggtctaagttga 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 1099 - 1155
Alignment:
Q  285 tgtttgtttattaactaagctatatgagtctgtctaagttgatttatatgatgatgt 341  Q
    ||||||||  |||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  1099 tgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 1155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 20 - 68
Alignment:
Q  215 aactcaacctcaacttagatcccaaggcatcttgcaaactctaccaaaa 263  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| ||||||    
T  20 aactcaatctcaacttagttcccaaagcagcttgcaaactctcccaaaa 68  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 243 - 275
Alignment:
Q  142 taaaataattaaataaatagctagggcgttaca 174  Q
    ||||||||||||||||||| |||||||||||||    
T  243 taaaataattaaataaataactagggcgttaca 275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 51384 - 51416
Alignment:
Q  142 taaaataattaaataaatagctagggcgttaca 174  Q
    ||||||||||||||||||| |||||||||||||    
T  51384 taaaataattaaataaataactagggcgttaca 51416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 253 times since January 2019
Visitors: 6695