View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0881_high_13 (Length: 253)
Name: NF0881_high_13
Description: NF0881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0881_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 22 - 197
Target Start/End: Complemental strand, 38934088 - 38933916
Alignment:
| Q |
22 |
gacatcatcatcataaaacaaaaatgcatacaacacttaagctaaaagcaagtataggaaaataagccaccatgaattcttaaacggaacatgtttaagc |
121 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
38934088 |
gacatcatcatcataaaacaaaaatgcatataacacttaagctaaaagcaagtataggaaaataagccaccatgaattcttaaatggaacatgtttaagc |
38933989 |
T |
|
| Q |
122 |
taaaatgtcaaagcaattgccaacacataaacattgcaataggttaaaaaacaatgcatagtttcatggcaagcat |
197 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
38933988 |
taaaaggtcaaagcaattgccaacacataaacattgcaataggtt---aaacaatgcatagtttcatggcaagcat |
38933916 |
T |
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