View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0881_low_10 (Length: 391)

Name: NF0881_low_10
Description: NF0881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0881_low_10
NF0881_low_10
[»] chr7 (27 HSPs)
chr7 (160-319)||(16068855-16069014)
chr7 (1-68)||(14105178-14105245)
chr7 (1-68)||(14415195-14415262)
chr7 (10-68)||(8777474-8777532)
chr7 (10-68)||(21742234-21742292)
chr7 (16-68)||(16187145-16187197)
chr7 (20-68)||(38829410-38829458)
chr7 (4-69)||(17504714-17504779)
chr7 (4-69)||(17548435-17548500)
chr7 (10-69)||(16921926-16921985)
chr7 (26-68)||(4994638-4994680)
chr7 (12-69)||(21064185-21064242)
chr7 (20-68)||(13893715-13893762)
chr7 (20-68)||(29005328-29005376)
chr7 (18-69)||(13394427-13394478)
chr7 (18-69)||(16574503-16574554)
chr7 (18-69)||(16591108-16591159)
chr7 (10-49)||(16929039-16929078)
chr7 (18-69)||(35367329-35367380)
chr7 (22-68)||(123152-123197)
chr7 (19-69)||(7530385-7530435)
chr7 (22-68)||(13732500-13732545)
chr7 (27-69)||(13864098-13864139)
chr7 (22-68)||(16007543-16007588)
chr7 (22-68)||(48786427-48786472)
chr7 (18-68)||(15727115-15727166)
chr7 (10-69)||(23461343-23461403)
[»] chr8 (36 HSPs)
chr8 (164-319)||(17862095-17862250)
chr8 (1-68)||(17796467-17796534)
chr8 (1-68)||(28855060-28855127)
chr8 (10-68)||(9404641-9404699)
chr8 (10-68)||(45133840-45133898)
chr8 (20-68)||(8413487-8413535)
chr8 (20-68)||(11775978-11776026)
chr8 (20-68)||(18023215-18023263)
chr8 (20-68)||(21331093-21331141)
chr8 (26-68)||(36601622-36601664)
chr8 (4-69)||(20494104-20494169)
chr8 (20-68)||(21966437-21966485)
chr8 (20-68)||(21979203-21979251)
chr8 (20-68)||(21982688-21982736)
chr8 (20-68)||(21999174-21999222)
chr8 (20-68)||(22381304-22381352)
chr8 (20-68)||(11250527-11250575)
chr8 (20-68)||(22004814-22004862)
chr8 (20-68)||(44521937-44521985)
chr8 (18-69)||(15002849-15002900)
chr8 (18-69)||(20387739-20387790)
chr8 (18-69)||(32951154-32951205)
chr8 (10-69)||(44433165-44433224)
chr8 (18-69)||(15634831-15634882)
chr8 (18-69)||(7300026-7300077)
chr8 (18-69)||(17616023-17616074)
chr8 (18-69)||(25657261-25657312)
chr8 (22-68)||(10833867-10833913)
chr8 (22-68)||(22058351-22058397)
chr8 (22-68)||(22144347-22144392)
chr8 (22-68)||(24706769-24706815)
chr8 (19-68)||(14420457-14420506)
chr8 (20-69)||(22433360-22433409)
chr8 (26-58)||(42559201-42559233)
chr8 (20-68)||(34951684-34951732)
chr8 (26-77)||(41993519-41993571)
[»] scaffold0010 (2 HSPs)
scaffold0010 (164-319)||(142295-142450)
scaffold0010 (18-69)||(106562-106613)
[»] chr4 (31 HSPs)
chr4 (164-319)||(19728296-19728451)
chr4 (164-319)||(17418653-17418807)
chr4 (1-74)||(33849995-33850068)
chr4 (1-68)||(45006180-45006247)
chr4 (10-68)||(4172137-4172195)
chr4 (10-68)||(31115988-31116046)
chr4 (4-69)||(15239564-15239629)
chr4 (20-68)||(41945980-41946028)
chr4 (20-68)||(56114495-56114543)
chr4 (20-68)||(38979676-38979724)
chr4 (18-74)||(16277011-16277067)
chr4 (18-69)||(15712446-15712497)
chr4 (18-69)||(18231004-18231055)
chr4 (18-69)||(28919930-28919981)
chr4 (18-69)||(33661340-33661391)
chr4 (19-69)||(15415636-15415686)
chr4 (18-69)||(13879031-13879082)
chr4 (18-74)||(20898481-20898537)
chr4 (18-69)||(9333287-9333338)
chr4 (18-69)||(9387070-9387121)
chr4 (18-69)||(10314801-10314852)
chr4 (10-69)||(13043529-13043588)
chr4 (18-69)||(14699811-14699862)
chr4 (18-69)||(21188710-21188761)
chr4 (18-69)||(28386493-28386544)
chr4 (22-68)||(288204-288249)
chr4 (22-68)||(13745852-13745897)
chr4 (19-69)||(15413634-15413684)
chr4 (22-68)||(27028995-27029041)
chr4 (19-69)||(53386652-53386702)
chr4 (4-69)||(16370472-16370537)
[»] scaffold1043 (1 HSPs)
scaffold1043 (164-319)||(1276-1431)
[»] scaffold0170 (1 HSPs)
scaffold0170 (173-319)||(17302-17448)
[»] chr5 (25 HSPs)
chr5 (164-319)||(25756632-25756787)
chr5 (179-301)||(25791026-25791146)
chr5 (1-68)||(27868318-27868385)
chr5 (10-68)||(43122277-43122335)
chr5 (10-68)||(43125821-43125879)
chr5 (20-68)||(22757552-22757600)
chr5 (20-68)||(33472302-33472350)
chr5 (20-68)||(43242232-43242280)
chr5 (20-68)||(22356642-22356690)
chr5 (20-68)||(36461302-36461350)
chr5 (18-69)||(21979803-21979854)
chr5 (18-69)||(23694562-23694613)
chr5 (4-69)||(24276243-24276308)
chr5 (4-69)||(24385905-24385970)
chr5 (18-69)||(21662879-21662930)
chr5 (18-69)||(23669467-23669518)
chr5 (22-68)||(16254897-16254942)
chr5 (22-68)||(16258530-16258575)
chr5 (22-68)||(22588694-22588739)
chr5 (22-68)||(22592249-22592294)
chr5 (22-68)||(22595804-22595849)
chr5 (22-68)||(22881300-22881346)
chr5 (26-77)||(7796270-7796322)
chr5 (26-69)||(22827536-22827580)
chr5 (18-69)||(30344431-30344482)
[»] chr2 (23 HSPs)
chr2 (180-319)||(23907840-23907979)
chr2 (1-74)||(23338149-23338222)
chr2 (20-68)||(20589997-20590045)
chr2 (20-68)||(24668701-24668749)
chr2 (20-68)||(20950615-20950663)
chr2 (18-69)||(22110788-22110839)
chr2 (18-69)||(23376171-23376222)
chr2 (10-69)||(28350408-28350467)
chr2 (4-69)||(10038803-10038868)
chr2 (4-69)||(23086628-23086693)
chr2 (19-66)||(19802610-19802657)
chr2 (29-68)||(23149844-23149883)
chr2 (29-68)||(23561634-23561673)
chr2 (18-69)||(24272770-24272821)
chr2 (18-69)||(31504704-31504755)
chr2 (18-69)||(31507270-31507321)
chr2 (18-69)||(37380755-37380806)
chr2 (22-68)||(12626872-12626918)
chr2 (22-68)||(24505814-24505859)
chr2 (22-68)||(31757033-31757078)
chr2 (22-68)||(41683723-41683768)
chr2 (22-68)||(44622044-44622089)
chr2 (19-77)||(25652470-25652529)
[»] chr6 (27 HSPs)
chr6 (164-317)||(14745719-14745871)
chr6 (180-317)||(22396253-22396396)
chr6 (1-68)||(25800048-25800115)
chr6 (1-68)||(14584145-14584212)
chr6 (1-68)||(15685069-15685136)
chr6 (20-68)||(7430876-7430924)
chr6 (20-68)||(16884358-16884406)
chr6 (20-68)||(23225597-23225645)
chr6 (20-68)||(23957128-23957176)
chr6 (20-68)||(31021459-31021507)
chr6 (20-68)||(34295938-34295986)
chr6 (223-319)||(24622313-24622410)
chr6 (20-68)||(1255090-1255138)
chr6 (20-68)||(31021324-31021372)
chr6 (26-68)||(25739595-25739637)
chr6 (4-69)||(15540368-15540433)
chr6 (20-68)||(9621295-9621343)
chr6 (20-68)||(14593393-14593441)
chr6 (10-69)||(22347742-22347801)
chr6 (18-69)||(23610730-23610781)
chr6 (22-68)||(8524044-8524089)
chr6 (22-68)||(12597073-12597119)
chr6 (22-68)||(16830909-16830955)
chr6 (22-68)||(21504991-21505036)
chr6 (22-68)||(29493866-29493911)
chr6 (18-68)||(1588995-1589046)
chr6 (25-68)||(21477535-21477579)
[»] chr1 (21 HSPs)
chr1 (1-74)||(297585-297658)
chr1 (20-68)||(634743-634791)
chr1 (20-68)||(2331784-2331832)
chr1 (20-68)||(7791295-7791343)
chr1 (16-68)||(11807934-11807986)
chr1 (20-68)||(16402171-16402219)
chr1 (20-68)||(45308436-45308484)
chr1 (20-68)||(20029488-20029536)
chr1 (18-74)||(20580571-20580627)
chr1 (18-69)||(18271584-18271635)
chr1 (18-69)||(18276238-18276289)
chr1 (18-69)||(20902388-20902439)
chr1 (18-69)||(28203505-28203556)
chr1 (22-68)||(20632430-20632475)
chr1 (22-68)||(20887641-20887686)
chr1 (22-68)||(22075479-22075524)
chr1 (22-68)||(22899215-22899260)
chr1 (22-68)||(36182690-36182735)
chr1 (22-68)||(37359580-37359625)
chr1 (18-69)||(14431314-14431365)
chr1 (18-69)||(21180027-21180078)
[»] scaffold0094 (1 HSPs)
scaffold0094 (1-74)||(47585-47658)
[»] chr3 (23 HSPs)
chr3 (1-68)||(55291351-55291418)
chr3 (20-68)||(42792-42840)
chr3 (20-68)||(16324279-16324327)
chr3 (26-68)||(51602264-51602306)
chr3 (26-68)||(3804097-3804139)
chr3 (20-68)||(2247390-2247438)
chr3 (20-68)||(13437497-13437545)
chr3 (20-68)||(21838613-21838660)
chr3 (20-68)||(30123118-30123166)
chr3 (18-69)||(13837392-13837443)
chr3 (18-69)||(30205359-30205410)
chr3 (20-68)||(17514088-17514136)
chr3 (10-65)||(10988576-10988631)
chr3 (22-68)||(602601-602647)
chr3 (22-68)||(2037451-2037496)
chr3 (22-68)||(2041192-2041237)
chr3 (22-68)||(7633478-7633524)
chr3 (22-68)||(14039291-14039336)
chr3 (22-68)||(14042759-14042804)
chr3 (22-68)||(39231838-39231883)
chr3 (22-68)||(54042735-54042781)
chr3 (19-77)||(15239306-15239365)
chr3 (18-69)||(52337701-52337753)
[»] scaffold0141 (1 HSPs)
scaffold0141 (10-68)||(34272-34330)
[»] scaffold0049 (1 HSPs)
scaffold0049 (10-68)||(80482-80540)
[»] scaffold0044 (1 HSPs)
scaffold0044 (4-69)||(4447-4512)
[»] scaffold0175 (1 HSPs)
scaffold0175 (20-68)||(19117-19165)
[»] scaffold0720 (1 HSPs)
scaffold0720 (19-68)||(177-226)
[»] scaffold1555 (1 HSPs)
scaffold1555 (20-68)||(429-477)
[»] scaffold0525 (2 HSPs)
scaffold0525 (20-68)||(10293-10341)
scaffold0525 (22-68)||(7367-7412)
[»] scaffold0117 (1 HSPs)
scaffold0117 (20-68)||(39948-39996)
[»] scaffold0001 (4 HSPs)
scaffold0001 (20-68)||(151849-151897)
scaffold0001 (20-68)||(171353-171401)
scaffold0001 (20-68)||(177056-177104)
scaffold0001 (28-65)||(498580-498617)
[»] scaffold0457 (1 HSPs)
scaffold0457 (22-68)||(10648-10694)
[»] scaffold0004 (1 HSPs)
scaffold0004 (26-68)||(60695-60737)
[»] scaffold0447 (2 HSPs)
scaffold0447 (4-69)||(12701-12766)
scaffold0447 (4-69)||(8087-8152)
[»] scaffold0388 (1 HSPs)
scaffold0388 (4-69)||(14758-14823)
[»] scaffold0016 (1 HSPs)
scaffold0016 (20-68)||(171845-171893)
[»] scaffold0015 (1 HSPs)
scaffold0015 (20-68)||(210128-210176)
[»] scaffold0422 (1 HSPs)
scaffold0422 (10-69)||(4195-4254)
[»] scaffold0546 (1 HSPs)
scaffold0546 (26-68)||(9580-9622)
[»] scaffold0109 (1 HSPs)
scaffold0109 (26-68)||(3685-3727)
[»] scaffold0023 (1 HSPs)
scaffold0023 (10-68)||(163567-163625)
[»] scaffold0515 (1 HSPs)
scaffold0515 (4-69)||(7088-7153)
[»] scaffold0383 (1 HSPs)
scaffold0383 (4-69)||(10696-10761)
[»] scaffold0306 (1 HSPs)
scaffold0306 (4-69)||(7098-7163)
[»] scaffold0152 (1 HSPs)
scaffold0152 (4-69)||(24709-24774)
[»] scaffold0080 (2 HSPs)
scaffold0080 (27-68)||(30254-30295)
scaffold0080 (27-68)||(35719-35760)
[»] scaffold0331 (1 HSPs)
scaffold0331 (20-68)||(4985-5033)
[»] scaffold0098 (2 HSPs)
scaffold0098 (20-68)||(25421-25469)
scaffold0098 (20-68)||(36291-36339)
[»] scaffold0609 (1 HSPs)
scaffold0609 (18-69)||(889-940)
[»] scaffold0500 (1 HSPs)
scaffold0500 (18-69)||(10461-10512)
[»] scaffold0334 (1 HSPs)
scaffold0334 (18-69)||(2316-2367)
[»] scaffold0077 (1 HSPs)
scaffold0077 (10-69)||(29159-29218)
[»] scaffold0034 (1 HSPs)
scaffold0034 (18-69)||(33676-33727)
[»] scaffold1276 (1 HSPs)
scaffold1276 (19-69)||(1354-1404)
[»] scaffold0371 (1 HSPs)
scaffold0371 (19-69)||(8774-8824)
[»] scaffold0860 (1 HSPs)
scaffold0860 (20-69)||(4020-4069)
[»] scaffold0635 (1 HSPs)
scaffold0635 (4-69)||(8202-8267)
[»] scaffold0130 (1 HSPs)
scaffold0130 (4-69)||(1610-1674)
[»] scaffold0009 (1 HSPs)
scaffold0009 (4-69)||(160646-160711)
[»] scaffold0335 (1 HSPs)
scaffold0335 (18-69)||(2048-2099)
[»] scaffold0301 (2 HSPs)
scaffold0301 (20-68)||(11058-11106)
scaffold0301 (20-68)||(15458-15506)
[»] scaffold0962 (1 HSPs)
scaffold0962 (18-69)||(352-403)
[»] scaffold0586 (1 HSPs)
scaffold0586 (10-69)||(4992-5051)
[»] scaffold0453 (1 HSPs)
scaffold0453 (18-69)||(6773-6824)
[»] scaffold0181 (1 HSPs)
scaffold0181 (18-69)||(25257-25308)
[»] scaffold0151 (1 HSPs)
scaffold0151 (18-69)||(10348-10399)
[»] scaffold0107 (1 HSPs)
scaffold0107 (18-69)||(4142-4193)
[»] scaffold0064 (2 HSPs)
scaffold0064 (18-69)||(29432-29483)
scaffold0064 (18-69)||(41423-41474)
[»] scaffold0014 (1 HSPs)
scaffold0014 (19-77)||(189984-190043)
[»] scaffold0395 (1 HSPs)
scaffold0395 (22-68)||(7504-7550)
[»] scaffold0058 (1 HSPs)
scaffold0058 (22-68)||(47755-47800)
[»] scaffold0042 (1 HSPs)
scaffold0042 (19-69)||(54094-54144)
[»] scaffold0021 (1 HSPs)
scaffold0021 (22-68)||(132932-132977)
[»] scaffold0069 (1 HSPs)
scaffold0069 (18-69)||(35765-35818)
[»] scaffold0298 (1 HSPs)
scaffold0298 (18-69)||(867-918)
[»] scaffold0124 (1 HSPs)
scaffold0124 (18-69)||(15716-15767)


Alignment Details
Target: chr7 (Bit Score: 156; Significance: 9e-83; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 160 - 319
Target Start/End: Original strand, 16068855 - 16069014
Alignment:
Q  160 ggtgttaactttattttaactttgctttgacctcattcggacatattgatgacgttcattttataatgatgatgagggtgatgttactaattatattgat 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16068855 ggtgttaactttattttaactttgctttgacctcattcggacatattgatgacgttcattttataatgatgatgagggtgatgttactaattatattgat 16068954  T
Q  260 gatgataaaatgcatgtctattttatattgatgatgataatgacaatgtctaatttatat 319  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16068955 gatgataaaatgcatgtcaattttatattgatgatgataatgacaatgtctaatttatat 16069014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14105245 - 14105178
Alignment:
Q  1 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14105245 cacaactccaataattactaattcccacttattctattaaatagtaaaataactcatttaataaaata 14105178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14415262 - 14415195
Alignment:
Q  1 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14415262 cacaactccaataattactaattcccacttattctattaaatagtaaaataactcatttaataaaata 14415195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 8777474 - 8777532
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8777474 aataattactaattctcacttattctattaaatagtaaaatcactcatttaataaaata 8777532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 21742292 - 21742234
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21742292 aataattactaattcccacttattctattaaatagtaaaataactcatttaataaaata 21742234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 16187145 - 16187197
Alignment:
Q  16 tactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16187145 tactaattctcacttattctattaaatagtaacataactcatttaataaaata 16187197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 38829410 - 38829458
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38829410 aattcccacttattctattaaatagtaaaataactcatttaataaaata 38829458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 17504779 - 17504714
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  17504779 aactccaacaattactaattctcacttattctattaaataataaaaatagtcatttaataaaatac 17504714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 17548435 - 17548500
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  17548435 aactccaacaattactaattctcacttattctattaaataataaaaatagtcatttaataaaatac 17548500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 16921985 - 16921926
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||| |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  16921985 aataattcctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 16921926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 4994638 - 4994680
Alignment:
Q  26 cacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  4994638 cacttattctattaaatagtaaaataattcatttaataaaata 4994680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 21064242 - 21064185
Alignment:
Q  12 taattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  21064242 taattcctaattctcacttattctattaaataataaaaatagccatttaataaaatac 21064185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 13893715 - 13893762
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  13893715 aattcccacttattctattaaatggtaaaataactca-ttaataaaata 13893762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 29005328 - 29005376
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| ||| |||||||||||||||||| |||||| |||||||||||||    
T  29005328 aattcccacatattctattaaatagtaacataacttatttaataaaata 29005376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 13394478 - 13394427
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  13394478 ctaattctcacttattctattaaatactaaaaatagccatttaataaaatac 13394427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 16574503 - 16574554
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  16574503 ctaattctcacttattctattaaataataaaagtagccatttaataaaatac 16574554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 16591159 - 16591108
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  16591159 ctaattctcacttattctattaaataataaaagtagccatttaataaaatac 16591108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 16929078 - 16929039
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaa 49  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  16929078 aataattcctaattctcacttattctattaaataataaaa 16929039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 35367329 - 35367380
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  35367329 ctaattctcacttattctattaaataataaaaatagccatttaataaaatac 35367380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 123197 - 123152
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  123197 ttctcacttattctattaaataataaaat-agtcatttaataaaata 123152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 7530385 - 7530435
Alignment:
Q  19 taattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||||||||||||||||||||| |||||  | | ||||||||||||||    
T  7530385 taattctcacttattctattaaataataaaaatagttatttaataaaatac 7530435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 13732545 - 13732500
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  13732545 ttctcacttattctattaaataataaaat-agtcatttaataaaata 13732500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 13864139 - 13864098
Alignment:
Q  27 acttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  13864139 acttattctattaaataataaaataa-tcatttaataaaatac 13864098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 16007543 - 16007588
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  16007543 ttctcacttattctattaaataataaaat-agtcatttaataaaata 16007588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 48786427 - 48786472
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  48786427 ttctcacttattctattaaataataaaat-agtcatttaataaaata 48786472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 15727166 - 15727115
Alignment:
Q  18 ctaattctcacttattctattaaatagt--aaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||||||| |  |||||||| ||||||||||||||    
T  15727166 ctaattctcacttattctattaaataataaaaaataac-catttaataaaata 15727115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 23461403 - 23461343
Alignment:
Q  10 aataattactaattctcacttatt-ctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| || ||||||||||||||| |||||||||| |||||  | ||||||||||||||||    
T  23461403 aataaatattaattctcacttatttctattaaataataaaaatagtcatttaataaaatac 23461343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 8e-71; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 164 - 319
Target Start/End: Original strand, 17862095 - 17862250
Alignment:
Q  164 ttaactttattttaactttgctttgacctcattcggacatattgatgacgttcattttataatgatgatgagggtgatgttactaattatattgatgatg 263  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  17862095 ttaactttcttttaactttggtttgacctcattcgggcatattgatgacgttcattttataatgatgatgagattgatgttactaattatattgatgatg 17862194  T
Q  264 ataaaatgcatgtctattttatattgatgatgataatgacaatgtctaatttatat 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17862195 ataaaatgcatgtctattttatattgatgatgataatgacaatgtctaatttatat 17862250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17796467 - 17796534
Alignment:
Q  1 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17796467 cacaactctaataattactaattctcacttattctattgaatagtaaaataactcatttaataaaata 17796534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 28855060 - 28855127
Alignment:
Q  1 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  28855060 cacaactccaataattactaattcccacttattctattaaatagtaaaataagtcatttaataaaata 28855127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 9404699 - 9404641
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9404699 aataattactaattcccacttattctattaaatagtaaaataactcatttaataaaata 9404641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 45133898 - 45133840
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  45133898 aataattactaattcccacttattctattaaatagtaaaatcactcatttaataaaata 45133840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 8413535 - 8413487
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8413535 aattcccacttattctattaaatagtaaaataactcatttaataaaata 8413487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 11775978 - 11776026
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11775978 aattcccacttattctattaaatagtaaaataactcatttaataaaata 11776026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 18023263 - 18023215
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18023263 aattcccacttattctattaaatagtaaaataactcatttaataaaata 18023215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 21331093 - 21331141
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21331093 aattcccacttattctattaaatagtaaaataactcatttaataaaata 21331141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 36601622 - 36601664
Alignment:
Q  26 cacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  36601622 cacttattctattaaatagtaaaataactcatttaataaaata 36601664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 20494169 - 20494104
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| |||||||||||||||||||||||||||||||||| || ||  | ||||||||||||||||    
T  20494169 aactccaataattactaattctcacttattctattaaataatacaaatagtcatttaataaaatac 20494104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 21966485 - 21966437
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  21966485 aattcccacttattctattaaatagtaacataactcatttaataaaata 21966437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 21979251 - 21979203
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  21979251 aattcccacttattctattaaatagtaacataactcatttaataaaata 21979203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 21982736 - 21982688
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  21982736 aattcccacttattctattaaatagtaacataactcatttaataaaata 21982688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 21999222 - 21999174
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  21999222 aattcccacttattctattaaatagtaacataactcatttaataaaata 21999174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 22381304 - 22381352
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  22381304 aattcccacttattttattaaatagtaaaataactcatttaataaaata 22381352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 11250575 - 11250527
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  11250575 aattcccacttattctattaaatagtaacataacttatttaataaaata 11250527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 22004862 - 22004814
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  22004862 aattcccacttattatattaaatagtaacataactcatttaataaaata 22004814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 44521985 - 44521937
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  44521985 aattcccacttattctattaaatagtaacataacttatttaataaaata 44521937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 15002900 - 15002849
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  15002900 ctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 15002849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 20387739 - 20387790
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  20387739 ctaattctcacttattctattaaataataaaaataatcatttaataaaatac 20387790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 32951154 - 32951205
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  32951154 ctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 32951205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 44433165 - 44433224
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||| |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  44433165 aataattcctaattctcacttattctattaaataataaaaatagccatttaataaaatac 44433224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 15634882 - 15634831
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaa-taactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| ||||| |||| |||||||||||||||    
T  15634882 ctaattctcacttattctattaaataataaaagtaac-catttaataaaatac 15634831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 7300077 - 7300026
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  7300077 ctaattctcacttattctattaaatactaaaaatagccatttaataaaatac 7300026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 17616023 - 17616074
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  17616023 ctaattctcacttattctattaaatactaaaaatagccatttaataaaatac 17616074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 25657312 - 25657261
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| | |||  | ||||||||||||||||    
T  25657312 ctaattctcacttattctattaaataatgaaaatagtcatttaataaaatac 25657261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 10833913 - 10833867
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||  | |||||||||||||||    
T  10833913 ttctcacttattctattaaataataaaaatagtcatttaataaaata 10833867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 22058397 - 22058351
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||  | |||||||||||||||    
T  22058397 ttctcacttattctattaaataataaaaataatcatttaataaaata 22058351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 22144392 - 22144347
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  22144392 ttctcacttattctattaaataataaaat-agtcatttaataaaata 22144347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 24706815 - 24706769
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||  | |||||||||||||||    
T  24706815 ttctcacttattctattaaataataaaaatagtcatttaataaaata 24706769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 14420457 - 14420506
Alignment:
Q  19 taattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||| ||||||||||||||| |||||  | |||||||||||||||    
T  14420457 taattctcatttattctattaaataataaaaataatcatttaataaaata 14420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 22433409 - 22433360
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||| ||||||||| |||||  | ||||||||||||||||    
T  22433409 aattctcacttattttattaaataataaaaatagtcatttaataaaatac 22433360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 42559233 - 42559201
Alignment:
Q  26 cacttattctattaaatagtaaaataactcatt 58  Q
    ||||||||||||||||||||| |||||||||||    
T  42559233 cacttattctattaaatagtanaataactcatt 42559201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 34951684 - 34951732
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| ||||||||||||| |  ||||| ||||||||||||||||||||    
T  34951684 aattcccacttattctatttatcagtaacataactcatttaataaaata 34951732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 41993571 - 41993519
Alignment:
Q  26 cacttattctattaaatagtaaaataactcatttaataaaatac-ccacaaca 77  Q
    |||||||||||||||||| |||||  | |||||||||||||||| ||||||||    
T  41993571 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaaca 41993519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 128; Significance: 4e-66; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 164 - 319
Target Start/End: Complemental strand, 142450 - 142295
Alignment:
Q  164 ttaactttattttaactttgctttgacctcattcggacatattgatgacgttcattttataatgatgatgagggtgatgttactaattatattgatgatg 263  Q
    |||||||| ||||| ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  142450 ttaactttcttttagctttggtttgacctctttcggacatattgttgacgttcattttataatgatgatgagagtgatgttactaattatattgatgatg 142351  T
Q  264 ataaaatgcatgtctattttatattgatgatgataatgacaatgtctaatttatat 319  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  142350 ataaaatgcatgtctattttatattgatgatgataatgaccatgtctaatttatat 142295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 106562 - 106613
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||| ||||||||||    
T  106562 ctaattctcacttattctattaaatactaaaaatagtcattcaataaaatac 106613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 1e-63; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 164 - 319
Target Start/End: Original strand, 19728296 - 19728451
Alignment:
Q  164 ttaactttattttaactttgctttgacctcattcggacatattgatgacgttcattttataatgatgatgagggtgatgttactaattatattgatgatg 263  Q
    |||||||| ||||| ||||| ||||||||||||| ||| ||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  19728296 ttaactttcttttagctttggtttgacctcattcagacgtattgttgacgtttattttataatgatgatgagagtgatgttactaattatattgatgatg 19728395  T
Q  264 ataaaatgcatgtctattttatattgatgatgataatgacaatgtctaatttatat 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19728396 ataaaatgcatgtctattttatattgatgatgataatgacaatgtctaatttatat 19728451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 164 - 319
Target Start/End: Complemental strand, 17418807 - 17418653
Alignment:
Q  164 ttaactttattttaactttgctttgacctcattcggacatattgatgacgttcattttataatgatgatgagggtgatgttactaattatattgatgatg 263  Q
    |||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||| | |||||||||||    
T  17418807 ttaactttcttttatctttggtttgacctcattcagacatattgatgacgttcattttataataatgattagggtgatgttactaaatgtattgatgatg 17418708  T
Q  264 ataaaatgcatgtctattttatattgatgatgataatgacaatgtctaatttatat 319  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  17418707 ataaaatgcatgtctatttta-attgatgatgataatgactatgtctaatttatat 17418653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33849995 - 33850068
Alignment:
Q  1 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatacccaca 74  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33849995 cacaactccaataattactaattcccacttattctattaaatagtaaaataactcatttaataaaatacccaca 33850068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 45006180 - 45006247
Alignment:
Q  1 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45006180 cacaacttcaataattactaattcccacttattctattaaatagtaaaataactcatttaataaaata 45006247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 4172137 - 4172195
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4172137 aataattactaattcccacttattctattaaatagtaaaataactcatttaataaaata 4172195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 31116046 - 31115988
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31116046 aataattactaattcccacttattctattaaatagtaaaataactcatttaataaaata 31115988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 15239629 - 15239564
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||  | ||||||||||||||||    
T  15239629 aactccaataattactaagtctcacttattctattaaatagtaaaaatagtcatttaataaaatac 15239564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 41946028 - 41945980
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41946028 aattcccacttattctattaaatagtaaaataactcatttaataaaata 41945980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 56114543 - 56114495
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  56114543 aattcccacttattctattaaatagtaaaataactcatttaataaaata 56114495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 38979724 - 38979676
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  38979724 aattcccacttattctattaaatagtaaaataattcatttaataaaata 38979676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 16277067 - 16277011
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatacccaca 74  Q
    |||||||||||||||||||||||||| |||||  |  ||||||||||||||||||||    
T  16277067 ctaattctcacttattctattaaatactaaaaatagccatttaataaaatacccaca 16277011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 15712497 - 15712446
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  15712497 ctaattctcacttattctattaaatactaaaaatagtcatttaataaaatac 15712446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 18231004 - 18231055
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  18231004 ctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 18231055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 28919930 - 28919981
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  28919930 ctaattctcacttattctattaaataataaaaataatcatttaataaaatac 28919981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 33661391 - 33661340
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  33661391 ctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 33661340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 15415686 - 15415636
Alignment:
Q  19 taattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  15415686 taattctcacttattctattaaataataaaaatagtcatttaataaaatac 15415636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 13879031 - 13879082
Alignment:
Q  18 ctaattctcacttattctattaaatagt-aaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| | |||||||| |||||||||||||||    
T  13879031 ctaattctcacttattctattaaataataaaaataac-catttaataaaatac 13879082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 20898537 - 20898481
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatacccaca 74  Q
    ||||| |||||||||||||||||||| |||||  |  ||||||||||||||||||||    
T  20898537 ctaatgctcacttattctattaaatactaaaaatagccatttaataaaatacccaca 20898481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 9333338 - 9333287
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  9333338 ctaattctcacttattctattaaatactaaaaatagccatttaataaaatac 9333287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 9387121 - 9387070
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  9387121 ctaattctcacttattctattaaatactaaaaatagccatttaataaaatac 9387070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 10314801 - 10314852
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  10314801 ctaattctcacttattctattaaatactaaaaatagccatttaataaaatac 10314852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 13043588 - 13043529
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||| ||||||||||||||||| |||||||| |||||  |  |||||||||||||||    
T  13043588 aataattcctaattctcacttattccattaaataataaaaatagccatttaataaaatac 13043529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 14699811 - 14699862
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  14699811 ctaattctcacttattctattaaatactaaaaatagccatttaataaaatac 14699862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 21188761 - 21188710
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||||| |||||||||||||||| |||||  | ||||||||||||||||    
T  21188761 ctaattctctcttattctattaaataataaaaatagtcatttaataaaatac 21188710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 28386493 - 28386544
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  28386493 ctaattctcacttattctattaaatactaaaaatagccatttaataaaatac 28386544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 288204 - 288249
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  288204 ttctcacttattctattaaataataaaat-agtcatttaataaaata 288249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 13745852 - 13745897
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  13745852 ttctcacttattctattaaataataaaat-agtcatttaataaaata 13745897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 15413684 - 15413634
Alignment:
Q  19 taattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||| |||||||||||||||||| |||||  | ||||||||||||||||    
T  15413684 taattcccacttattctattaaataataaaaatagtcatttaataaaatac 15413634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 27028995 - 27029041
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||  | |||||||||||||||    
T  27028995 ttctcacttattctattaaataataaaaatagtcatttaataaaata 27029041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 53386702 - 53386652
Alignment:
Q  19 taattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  53386702 taattctcacttattctattaaatactaaaaatagccatttaataaaatac 53386652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 16370537 - 16370472
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| ||||| | ||||| | |||||||||||||||||| |||||  | ||||||||||||||||    
T  16370537 aactccaataaattctaatccccacttattctattaaataataaaaatagtcatttaataaaatac 16370472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1043 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: scaffold1043
Description:

Target: scaffold1043; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 164 - 319
Target Start/End: Original strand, 1276 - 1431
Alignment:
Q  164 ttaactttattttaactttgctttgacctcattcggacatattgatgacgttcattttataatgatgatgagggtgatgttactaattatattgatgatg 263  Q
    |||||||| ||||| ||||| ||||||||||||| || |||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  1276 ttaactttcttttagctttggtttgacctcattcagaaatattgttgacgttaattttataatgatgatgagagtgatgttactaattatattgatgatg 1375  T
Q  264 ataaaatgcatgtctattttatattgatgatgataatgacaatgtctaatttatat 319  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  1376 ataaaatacatgtctattttatattgatgatgataatgacaaagtctaatttatat 1431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 173 - 319
Target Start/End: Complemental strand, 17448 - 17302
Alignment:
Q  173 ttttaactttgctttgacctcattcggacatattgatgacgttcattttataatgatgatgagggtgatgttactaattatattgatgatgataaaatgc 272  Q
    ||||| ||||| |||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17448 ttttagctttggtttgatttcattcagacatattgatgacgttcattttataatgatgatgagggtgatgttactaattatatcgatgatgataaaatgc 17349  T
Q  273 atgtctattttatattgatgatgataatgacaatgtctaatttatat 319  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||    
T  17348 atgtctattttatattgatgacaataatgaccatgtctaatttatat 17302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 9e-52; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 164 - 319
Target Start/End: Original strand, 25756632 - 25756787
Alignment:
Q  164 ttaactttattttaactttgctttgacctcattcggacatattgatgacgttcattttataatgatgatgagggtgatgttactaattatattgatgatg 263  Q
    |||||||| | ||| ||||  ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  25756632 ttaactttctcttagcttttgtttgacctcattcagacatattgatgacgttcattatataatgatgatgagggtgatgttactaattatatagatgatg 25756731  T
Q  264 ataaaatgcatgtctattttatattgatgatgataatgacaatgtctaatttatat 319  Q
    ||||| ||||||| ||||||||| |||||||||||||| | |||||||||||||||    
T  25756732 ataaagtgcatgtgtattttataatgatgatgataatggcgatgtctaatttatat 25756787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 179 - 301
Target Start/End: Complemental strand, 25791146 - 25791026
Alignment:
Q  179 ctttgctttgacctcattcggacatattgatgacgttcattttataatgatgatgagggtgatgttactaattatattgatgatgataaaatgcatgtct 278  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||| |||||||||    
T  25791146 ctttggtttgacctcattcagacatattgatgacgttcattttataatgatgatgagggtgatgttactagttatattgatg--gataaagtgcatgtct 25791049  T
Q  279 attttatattgatgatgataatg 301  Q
    |||||||||||||||||||||||    
T  25791048 attttatattgatgatgataatg 25791026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27868385 - 27868318
Alignment:
Q  1 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27868385 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 27868318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 43122277 - 43122335
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  43122277 aataattactaattcccacttattctatcaaatagtaaaataactcatttaataaaata 43122335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 43125821 - 43125879
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  43125821 aataattactaattcccacttattctatcaaatagtaaaataactcatttaataaaata 43125879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 22757600 - 22757552
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22757600 aattcccacttattctattaaatagtaaaataactcatttaataaaata 22757552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 33472350 - 33472302
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33472350 aattcccacttattctattaaatagtaaaataactcatttaataaaata 33472302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 43242280 - 43242232
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43242280 aattcccacttattctattaaatagtaaaataactcatttaataaaata 43242232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 22356690 - 22356642
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  22356690 aattcccaattattctattaaatagtaaaataactcatttaataaaata 22356642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 36461302 - 36461350
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  36461302 aattcccacttattctattaaatagtaaaataacacatttaataaaata 36461350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 21979854 - 21979803
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  21979854 ctaattctcacttattctattaaataataaaaataatcatttaataaaatac 21979803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 23694562 - 23694613
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  23694562 ctaattctcacttattctattaaatactaaaaatagtcatttaataaaatac 23694613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 24276308 - 24276243
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| ||||| | |||||||||||||| ||||||||||| |||||  | ||||||||||||||||    
T  24276308 aactccaataaattctaattctcacttaatctattaaataataaaaatagtcatttaataaaatac 24276243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 24385905 - 24385970
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| ||||| | |||||||||||||| ||||||||||| |||||  | ||||||||||||||||    
T  24385905 aactccaataaattctaattctcacttaatctattaaataataaaaatagtcatttaataaaatac 24385970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 21662930 - 21662879
Alignment:
Q  18 ctaattctcacttattctattaaatagt-aaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| | |||||||| |||||||||||||||    
T  21662930 ctaattctcacttattctattaaataatgaaaataac-catttaataaaatac 21662879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 23669467 - 23669518
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  23669467 ctaattctcacttattctattaaatactaaaaatagccatttaataaaatac 23669518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 16254942 - 16254897
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  16254942 ttctcacttattctattaaataataaaat-agtcatttaataaaata 16254897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 16258575 - 16258530
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  16258575 ttctcacttattctattaaataataaaat-agtcatttaataaaata 16258530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 22588739 - 22588694
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  22588739 ttctcacttattctattaaataataaaat-agtcatttaataaaata 22588694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 22592294 - 22592249
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  22592294 ttctcacttattctattaaataataaaat-agtcatttaataaaata 22592249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 22595849 - 22595804
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  22595849 ttctcacttattctattaaataataaaat-agtcatttaataaaata 22595804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 22881300 - 22881346
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||  | |||||||||||||||    
T  22881300 ttctcacttattctattaaataataaaaatagtcatttaataaaata 22881346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 7796270 - 7796322
Alignment:
Q  26 cacttattctattaaatagtaaaataactcatttaataaaatac-ccacaaca 77  Q
    |||||||||||||||||| |||||  | |||||||||||||||| ||||||||    
T  7796270 cacttattctattaaataataaaaataatcatttaataaaatacaccacaaca 7796322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 22827580 - 22827536
Alignment:
Q  26 cacttattctattaaatagtaaaa-taactcatttaataaaatac 69  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||    
T  22827580 cacttattctattaaataataaaaataaatcatttaataaaatac 22827536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 30344482 - 30344431
Alignment:
Q  18 ctaattctcacttattctattaaatagt-aaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| | |||||| | |||||||||||||||    
T  30344482 ctaattctcacttattctattaaataatgaaaatagc-catttaataaaatac 30344431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 9e-52; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 180 - 319
Target Start/End: Complemental strand, 23907979 - 23907840
Alignment:
Q  180 tttgctttgacctcattcggacatattgatgacgttcattttataatgatgatgagggtgatgttactaattatattgatgatgataaaatgcatgtcta 279  Q
    |||| |||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  23907979 tttggtttgacttcattcagacatattcatgacgttcattttataatgatgatgagggtgatgttactaattatatcgatgatgataaaatgaatgtcta 23907880  T
Q  280 ttttatattgatgatgataatgacaatgtctaatttatat 319  Q
    |||||||||||||| ||||||||| || ||||||||||||    
T  23907879 ttttatattgatgacgataatgaccatctctaatttatat 23907840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 23338222 - 23338149
Alignment:
Q  1 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatacccaca 74  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23338222 cacaactccaataattactaattcccacttattctattaaatagtaaaataactcatttaataaaatacccaca 23338149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 20590045 - 20589997
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20590045 aattcccacttattctattaaatagtaaaataactcatttaataaaata 20589997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 24668749 - 24668701
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24668749 aattcccacttattctattaaatagtaaaataactcatttaataaaata 24668701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 20950663 - 20950615
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  20950663 aattcccatttattctattaaatagtaaaataactcatttaataaaata 20950615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 22110788 - 22110839
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  22110788 ctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 22110839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 23376171 - 23376222
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  23376171 ctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 23376222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 28350408 - 28350467
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||| |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  28350408 aataattcctaattctcacttattctattaaataataaaaatagccatttaataaaatac 28350467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 10038868 - 10038803
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| |||||| ||| ||||||||||||||||||||||| || ||  | ||||||||||||||||    
T  10038868 aactccaataatcacttattctcacttattctattaaataatacaaatagtcatttaataaaatac 10038803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 23086628 - 23086693
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| ||||| | |||||||||||||||||||||||||  |||||  | ||||||||||||||||    
T  23086628 aactccaataaattctaattctcacttattctattaaattataaaaatagtcatttaataaaatac 23086693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 19802610 - 19802657
Alignment:
Q  19 taattctcacttattctattaaatagtaaaataactcatttaataaaa 66  Q
    ||||||||||||||||||||||||| |||||  | |||||||||||||    
T  19802610 taattctcacttattctattaaataataaaaatagtcatttaataaaa 19802657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 23149844 - 23149883
Alignment:
Q  29 ttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  23149844 ttattctattaaatactaaaataaatcatttaataaaata 23149883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 23561634 - 23561673
Alignment:
Q  29 ttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  23561634 ttattctattaaatactaaaataaatcatttaataaaata 23561673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 24272821 - 24272770
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  24272821 ctaattctcacttattctattaaataataaaaatagccatttaataaaatac 24272770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 31504704 - 31504755
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  31504704 ctaattctcacttattctattaaatactaaaaatagccatttaataaaatac 31504755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 31507270 - 31507321
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  31507270 ctaattctcacttattctattaaatactaaaaatagccatttaataaaatac 31507321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 37380755 - 37380806
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||| ||||||||||||||| |||||  | ||||||||||||||||    
T  37380755 ctaattctcatttattctattaaatactaaaaatagtcatttaataaaatac 37380806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 12626918 - 12626872
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||  | |||||||||||||||    
T  12626918 ttctcacttattctattaaataataaaaatagtcatttaataaaata 12626872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 24505814 - 24505859
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  24505814 ttctcacttattctattaaataataaaat-agtcatttaataaaata 24505859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 31757033 - 31757078
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  31757033 ttctcacttattctattaaataataaaat-agtcatttaataaaata 31757078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 41683768 - 41683723
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  41683768 ttctcacttattctattaaataataaaat-agtcatttaataaaata 41683723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 44622044 - 44622089
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  44622044 ttctcacttattctattaaataataaaat-agtcatttaataaaata 44622089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 25652470 - 25652529
Alignment:
Q  19 taattctcacttattctattaaatagt-aaaataactcatttaataaaatac-ccacaaca 77  Q
    |||||| |||||||||||||||||| | |||||||| ||||||||||||||| ||||||||    
T  25652470 taattcccacttattctattaaataataaaaataac-catttaataaaatacaccacaaca 25652529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 5e-41; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 164 - 317
Target Start/End: Complemental strand, 14745871 - 14745719
Alignment:
Q  164 ttaactttattttaactttgctttgacctcattcggacatattgatgacgttcattttataatgatgatgagggtgatgttactaattatattgatgatg 263  Q
    ||||||||  |||| ||||| |||||||| |||| || |||||||||| |||||||||||||| ||||||||| |||||||||||||||||||| |||||    
T  14745871 ttaactttcatttagctttggtttgaccttattcagatatattgatgatgttcattttataataatgatgaggatgatgttactaattatattggtgatg 14745772  T
Q  264 ataaaatgcatgtctattttatattgatgatgataatgacaatgtctaatttat 317  Q
    |||||||||||||||||| |||| |||||||||||||||  ||||| |||||||    
T  14745771 ataaaatgcatgtctattgtata-tgatgatgataatgatgatgtcgaatttat 14745719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 22396253 - 22396396
Alignment:
Q  180 tttgctttgacctcattcggacatattgatgacgttcattttataatgatgatgagggtgatgttact-----aattatattgatgatgataaaatgcat 274  Q
    |||| |||||||| |||| ||||||||||||| |||||||||||||| ||||||||| ||||||||||     |||||||||| ||||||||||||||||    
T  22396253 tttggtttgaccttattcagacatattgatgatgttcattttataataatgatgaggatgatgttactaattaaattatattggtgatgataaaatgcat 22396352  T
Q  275 gtctattttata-ttgatgatgataatgacaatgtctaatttat 317  Q
    |||||||||||| ||||||||||||||||| |||||||||||||    
T  22396353 gtctattttatatttgatgatgataatgacgatgtctaatttat 22396396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25800048 - 25800115
Alignment:
Q  1 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25800048 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 25800115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14584145 - 14584212
Alignment:
Q  1 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14584145 cacaactccaataattactaattcccacttattctattaaatagtaaaataactcatttaataaaata 14584212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15685136 - 15685069
Alignment:
Q  1 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  15685136 cacaactccaataattactaattcccacttactctattaaatagtaaaataactcatttaataaaata 15685069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 7430876 - 7430924
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7430876 aattcccacttattctattaaatagtaaaataactcatttaataaaata 7430924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 16884406 - 16884358
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16884406 aattcccacttattctattaaatagtaaaataactcatttaataaaata 16884358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 23225645 - 23225597
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23225645 aattcccacttattctattaaatagtaaaataactcatttaataaaata 23225597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 23957128 - 23957176
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23957128 aattcccacttattctattaaatagtaaaataactcatttaataaaata 23957176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 31021507 - 31021459
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31021507 aattcccacttattctattaaatagtaaaataactcatttaataaaata 31021459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 34295986 - 34295938
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34295986 aattcccacttattctattaaatagtaaaataactcatttaataaaata 34295938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 223 - 319
Target Start/End: Complemental strand, 24622410 - 24622313
Alignment:
Q  223 taatgatgatgagggtgatgtta-ctaattatattgatgatgataaaatgcatgtctattttatattgatgatgataatgacaatgtctaatttatat 319  Q
    ||||||| |||||| |||||||  |||||||| | ||| |||||||||   ||||||||||||||||||||||||||||||  ||||||||| |||||    
T  24622410 taatgataatgaggatgatgttgtctaattatttcgataatgataaaaatgatgtctattttatattgatgatgataatgatgatgtctaatctatat 24622313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 1255090 - 1255138
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  1255090 aattcccacttattctattaaatagtaacataactcatttaataaaata 1255138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 31021372 - 31021324
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  31021372 aattcccacttattctattaaatagtaaaataactcatttaatataata 31021324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 25739595 - 25739637
Alignment:
Q  26 cacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  25739595 cacttattttattaaatagtaaaataactcatttaataaaata 25739637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 15540368 - 15540433
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| || ||||||||||||||| ||||||||||||||| |||||  | ||||||||||||||||    
T  15540368 aactccaacaattactaattctcagttattctattaaataataaaaatagtcatttaataaaatac 15540433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 9621343 - 9621295
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  9621343 aattcccacttattctattaaatagtaacataacttatttaataaaata 9621295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 14593441 - 14593393
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  14593441 aattcccacttattctattaaatagtaacataacttatttaataaaata 14593393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 22347742 - 22347801
Alignment:
Q  10 aataattactaattctcacttattctattaaatagta-aaataactcatttaataaaatac 69  Q
    ||||||||||||||||||||||||||| |||||| || |||||| | ||||||||||||||    
T  22347742 aataattactaattctcacttattctactaaataatacaaataa-taatttaataaaatac 22347801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 23610781 - 23610730
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| |||||||||||||||||||| |||||  | ||||||||||||||||    
T  23610781 ctaatcctcacttattctattaaataataaaaatagtcatttaataaaatac 23610730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 8524044 - 8524089
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  8524044 ttctcacttattctattaaataataaaat-agtcatttaataaaata 8524089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 12597073 - 12597119
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||  | |||||||||||||||    
T  12597073 ttctcacttattctattaaataataaaaataatcatttaataaaata 12597119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 16830909 - 16830955
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||  | |||||||||||||||    
T  16830909 ttctcacttattctattaaataataaaaatagtcatttaataaaata 16830955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 21504991 - 21505036
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  21504991 ttctcacttattctattaaataataaaat-agtcatttaataaaata 21505036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 29493866 - 29493911
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  29493866 ttctcacttattctattaaataataaaat-agtcatttaataaaata 29493911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 1588995 - 1589046
Alignment:
Q  18 ctaattctcacttattctattaaatagt--aaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||||||| |  |||||||| ||||||||||||||    
T  1588995 ctaattctcacttattctattaaataataaaaaataac-catttaataaaata 1589046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 21477535 - 21477579
Alignment:
Q  25 tcacttattctattaaatagt-aaaataactcatttaataaaata 68  Q
    ||||||||||||||||||| | ||||||| |||||||||||||||    
T  21477535 tcacttattctattaaatattaaaaataaatcatttaataaaata 21477579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 297585 - 297658
Alignment:
Q  1 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatacccaca 74  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  297585 cacaactccaataattactaattcccacttattctattaaatagtaaaataactcatttaataaaatacccaca 297658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 634791 - 634743
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  634791 aattcccacttattctattaaatagtaaaataactcatttaataaaata 634743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 2331832 - 2331784
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2331832 aattcccacttattctattaaatagtaaaataactcatttaataaaata 2331784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 7791343 - 7791295
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7791343 aattcccacttattctattaaatagtaaaataactcatttaataaaata 7791295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 11807986 - 11807934
Alignment:
Q  16 tactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  11807986 tactaactctcacttattctattaaatagtaacataactcatttaataaaata 11807934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 16402171 - 16402219
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16402171 aattcccacttattctattaaatagtaaaataactcatttaataaaata 16402219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 45308436 - 45308484
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  45308436 aattcccacttattctattaaatagtaaaataattcatttaataaaata 45308484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 20029536 - 20029488
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  20029536 aattcccacttattctattaaatagtaacataacttatttaataaaata 20029488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 20580571 - 20580627
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatacccaca 74  Q
    |||||||||||||||||||||||||| |||||  |  ||||||||||||||||||||    
T  20580571 ctaattctcacttattctattaaatactaaaaatagccatttaataaaatacccaca 20580627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 18271584 - 18271635
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  18271584 ctaattctcacttattctattaaataataaaaatattcatttaataaaatac 18271635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 18276238 - 18276289
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  18276238 ctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 18276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 20902388 - 20902439
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  20902388 ctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 20902439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 28203556 - 28203505
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  28203556 ctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 28203505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 20632430 - 20632475
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  20632430 ttctcacttattctattaaataataaaat-agtcatttaataaaata 20632475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 20887686 - 20887641
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  20887686 ttctcacttattctattaaataataaaat-agtcatttaataaaata 20887641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 22075479 - 22075524
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  22075479 ttctcacttattctattaaataataaaat-agtcatttaataaaata 22075524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 22899260 - 22899215
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  22899260 ttctcacttattctattaaataataaaat-agtcatttaataaaata 22899215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 36182690 - 36182735
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  36182690 ttctcacttattctattaaataataaaat-agtcatttaataaaata 36182735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 37359580 - 37359625
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||| ||||||||| |||||||| |||||||||||||||    
T  37359580 ttctcacttattgtattaaataataaaataa-tcatttaataaaata 37359625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 14431365 - 14431314
Alignment:
Q  18 ctaattctcacttattctattaaatagt-aaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| | |||||||| ||||| |||||||||    
T  14431365 ctaattctcacttattctattaaatactaaaaataac-cattttataaaatac 14431314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 21180078 - 21180027
Alignment:
Q  18 ctaattctcacttattctattaaatagt-aaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| | |||||| | |||||||||||||||    
T  21180078 ctaattctcacttattctattaaataatgaaaatagc-catttaataaaatac 21180027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 47585 - 47658
Alignment:
Q  1 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatacccaca 74  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47585 cacaactccaataattactaattcccacttattctattaaatagtaaaataactcatttaataaaatactcaca 47658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 55291418 - 55291351
Alignment:
Q  1 cacaactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  55291418 cacaactccaataattactaattcccacttattctattaaatagtaaaataactcatttaataaaata 55291351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 42792 - 42840
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42792 aattcccacttattctattaaatagtaaaataactcatttaataaaata 42840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 16324327 - 16324279
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16324327 aattcccacttattctattaaatagtaaaataactcatttaataaaata 16324279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 51602306 - 51602264
Alignment:
Q  26 cacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  51602306 cacttattctattaaatagtaaaataactcatttaataaaata 51602264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 3804097 - 3804139
Alignment:
Q  26 cacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  3804097 cacttattctattaaatagtaaaataaatcatttaataaaata 3804139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 2247438 - 2247390
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  2247438 aattcccacttattctattaaatagtaacataacttatttaataaaata 2247390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 13437497 - 13437545
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  13437497 aattcccacttattctattaaatagtaacataacttatttaataaaata 13437545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 21838613 - 21838660
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  21838613 aattcccacttattc-attaaatagtaaaataactcatttaataaaata 21838660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 30123166 - 30123118
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||    
T  30123166 aattctcacttattctattaaatagcaacataacttatttaataaaata 30123118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 13837392 - 13837443
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  13837392 ctaattctcacttattctattaaataataaaaataatcatttaataaaatac 13837443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 30205410 - 30205359
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  30205410 ctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 30205359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 17514088 - 17514136
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| ||| |||||||||||||||||| |||||| |||||||||||||    
T  17514088 aattcacacatattctattaaatagtaacataacttatttaataaaata 17514136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 10988631 - 10988576
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaa 65  Q
    ||||||| |||||||||||||||||||||||||| |||||  |  |||||||||||    
T  10988631 aataattcctaattctcacttattctattaaataataaaaatagccatttaataaa 10988576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 602647 - 602601
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||  | |||||||||||||||    
T  602647 ttctcacttattctattaaataataaaaatagtcatttaataaaata 602601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 2037496 - 2037451
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  2037496 ttctcacttattctattaaataataaaat-agtcatttaataaaata 2037451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 2041237 - 2041192
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  2041237 ttctcacttattctattaaataataaaat-agtcatttaataaaata 2041192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 7633478 - 7633524
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||  | |||||||||||||||    
T  7633478 ttctcacttattctattaaataataaaaatagtcatttaataaaata 7633524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 14039291 - 14039336
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  14039291 ttctcacttattctattaaataataaaat-agtcatttaataaaata 14039336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 14042759 - 14042804
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  14042759 ttctcacttattctattaaataataaaat-agtcatttaataaaata 14042804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 39231838 - 39231883
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  39231838 ttctcacttattctattaaataataaaat-agtcatttaataaaata 39231883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 54042735 - 54042781
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||  | |||||||||||||||    
T  54042735 ttctcacttattctattaaataataaaaatagtcatttaataaaata 54042781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 15239306 - 15239365
Alignment:
Q  19 taattctcacttattctattaaatagt-aaaataactcatttaataaaatac-ccacaaca 77  Q
    |||||| |||||||||||||||||| | |||||||| ||||||||||||||| ||||||||    
T  15239306 taattcccacttattctattaaataataaaaataac-catttaataaaatacaccacaaca 15239365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 52337753 - 52337701
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaata-actcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| ||||| | |  |||||||||||||||    
T  52337753 ctaattctcacttattctattaaataataaaaaatagccatttaataaaatac 52337701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 34272 - 34330
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34272 aataattactaattcccacttattctattaaatagtaaaataactcatttaataaaata 34330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 80540 - 80482
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  80540 aataattactaattcccacttattctattaaatagtaaaataactcatttaataaaata 80482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 4512 - 4447
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | | ||||||||||||||    
T  4512 aactctaataattactaattctcacttattctattaaatagtaaaaatagttatttaataaaatac 4447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 19117 - 19165
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19117 aattctcacttattctattaaatagtaaaataactcatttaataaaata 19165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 226 - 177
Alignment:
Q  19 taattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  226 taattcccacttattctattaaatagtaaaataactcatttaataaaata 177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1555 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1555
Description:

Target: scaffold1555; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 429 - 477
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  429 aattcccacttattctattaaatagtaaaataactcatttaataaaata 477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 10293 - 10341
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10293 aattcccacttattctattaaatagtaaaataactcatttaataaaata 10341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 7412 - 7367
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  7412 ttctcacttattctattaaataataaaat-agtcatttaataaaata 7367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 39996 - 39948
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39996 aattcccacttattctattaaatagtaaaataactcatttaataaaata 39948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 151897 - 151849
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  151897 aattcccacttattctattaaatagtaaaataactcatttaataaaata 151849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 171353 - 171401
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  171353 aattcccacttattctattaaatagtaaaataactcatttaataaaata 171401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 177056 - 177104
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  177056 aattcccacttattctattaaatagtaaaataactcatttaataaaata 177104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 498580 - 498617
Alignment:
Q  28 cttattctattaaatagtaaaataactcatttaataaa 65  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  498580 cttattctattaaataataaaataattcatttaataaa 498617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 10694 - 10648
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  10694 ttctcacttattctattaaatagtaacataactcatttaataaaata 10648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 60695 - 60737
Alignment:
Q  26 cacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  60695 cacttattctattaaatagtaaaataactcatttaataaaata 60737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 12701 - 12766
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| |||||||||||||||||||||||||||||||||| || ||  | ||||||||||||||||    
T  12701 aactccaataattactaattctcacttattctattaaataatacaaatagtcatttaataaaatac 12766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 8087 - 8152
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| |||||||||||||||||||||||||||||||||| || ||  | |||||||||| |||||    
T  8087 aactccaataattactaattctcacttattctattaaataatacaaatagtcatttaatacaatac 8152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 14823 - 14758
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||  | ||||||||||||||||    
T  14823 aactccaataattactaattcccacttattctattaaataataaaaatagtcatttaataaaatac 14758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 171893 - 171845
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  171893 aattcccacttattctattaaatagtaacataactcatttaataaaata 171845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 210128 - 210176
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  210128 aattcccacttattctattaaatagtaacataactcatttaataaaata 210176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 4195 - 4254
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||| |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  4195 aataattcctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 4254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 9622 - 9580
Alignment:
Q  26 cacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  9622 cacttattctattaaatagtaaaataactcatttaatgaaata 9580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 3685 - 3727
Alignment:
Q  26 cacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  3685 cacttattctattaaatagtaaaataactcatttaatgaaata 3727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 163567 - 163625
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||| |||||||||||||||||||||||||| |||||  | |||||||||||||||    
T  163567 aataatttctaattctcacttattctattaaataataaaaatagtcatttaataaaata 163625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 7088 - 7153
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| ||||||||||||||||||||||| |||||||||| || ||  | ||||||||||||||||    
T  7088 aactccaataattactaattctcacttatactattaaataatataaatagtcatttaataaaatac 7153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 10696 - 10761
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| |||||||||||||||||||||||||||||||||| || ||  | |||||||||| |||||    
T  10696 aactccaataattactaattctcacttattctattaaataatacaaatagtcatttaatacaatac 10761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 7098 - 7163
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| ||||||||||||||||||||||| |||||||||| || ||  | ||||||||||||||||    
T  7098 aactccaataattactaattctcacttatactattaaataatataaatagtcatttaataaaatac 7163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 24709 - 24774
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| ||||||||||||||||||||||| |||||||||| || ||  | ||||||||||||||||    
T  24709 aactccaataattactaattctcacttatactattaaataatacaaatagtcatttaataaaatac 24774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 30254 - 30295
Alignment:
Q  27 acttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  30254 acttattctattaaataataaaataactcatttaataaaata 30295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 35719 - 35760
Alignment:
Q  27 acttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  35719 acttattctattaaataataaaataactcatttaataaaata 35760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 4985 - 5033
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  4985 aattcccacttattatattaaatagtaaaataaatcatttaataaaata 5033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 25421 - 25469
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  25421 aattcccacttattctattaaatagtaacataacttatttaataaaata 25469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 36291 - 36339
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  36291 aattcccacttattctattaaatagtaacataacttatttaataaaata 36339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 889 - 940
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  889 ctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 10512 - 10461
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  10512 ctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 10461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 2316 - 2367
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  2316 ctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 2367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 29159 - 29218
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||| |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  29159 aataattcctaattctcacttattctattaaataataaaaatagccatttaataaaatac 29218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 33727 - 33676
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  33727 ctaattctcacttattctattaaataataaaaatagtcatttaataaaatac 33676  T

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Target: scaffold1276 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 1354 - 1404
Alignment:
Q  19 taattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  1354 taattctcacttattctattaaataataaaaataatcatttaataaaatac 1404  T

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Target: scaffold0371 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 8774 - 8824
Alignment:
Q  19 taattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  8774 taattctcacttattctattaaataataaaaatagtcatttaataaaatac 8824  T

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Target: scaffold0860 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0860
Description:

Target: scaffold0860; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 4020 - 4069
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  4020 aattctcacttattctattaaataataaaaatagtcatttaataaaatac 4069  T

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Target: scaffold0635 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 8202 - 8267
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| |||||| ||| ||||||||||||||||||||||| || ||  | ||||||||||||||||    
T  8202 aactccaataatcacttattctcacttattctattaaataatacaaatagtcatttaataaaatac 8267  T

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Target: scaffold0130 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 1674 - 1610
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| |||||||| |||| |||||||||||||||||||| |||||  | ||||||||||||||||    
T  1674 aactccaataatta-taatcctcacttattctattaaataataaaaatagtcatttaataaaatac 1610  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 160646 - 160711
Alignment:
Q  4 aactctaataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||| ||| ||| ||||||||||| ||||||| |||||| |||||||  ||||||||||||||||    
T  160646 aactccaattatttctaattctcacatattctaataaataataaaatatatcatttaataaaatac 160711  T

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Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 2048 - 2099
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaa-taactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| ||||| |||| |||||||||||||||    
T  2048 ctaattctcacttattctattaaataataaaagtaac-catttaataaaatac 2099  T

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Target: scaffold0301 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 11106 - 11058
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||| ||||||||||| ||| ||||||||||||||||    
T  11106 aattcccacttattcttttaaatagtaacatagctcatttaataaaata 11058  T

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Target: scaffold0301; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 15506 - 15458
Alignment:
Q  20 aattctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    ||||| |||||||||| ||||||||||| ||| ||||||||||||||||    
T  15506 aattcccacttattcttttaaatagtaacatagctcatttaataaaata 15458  T

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Target: scaffold0962 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 403 - 352
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | |||| |||||||||||    
T  403 ctaattctcacttattctattaaataataaaaataatcatctaataaaatac 352  T

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Target: scaffold0586 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 4992 - 5051
Alignment:
Q  10 aataattactaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    ||||||| ||||||||| |||||||||||||||| |||||  |  |||||||||||||||    
T  4992 aataattcctaattctctcttattctattaaataataaaaatagccatttaataaaatac 5051  T

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Target: scaffold0453 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 6824 - 6773
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | |||||| |||||||||    
T  6824 ctaattctcacttattctattaaatactaaaaatattcattttataaaatac 6773  T

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Target: scaffold0181 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 25308 - 25257
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  | ||||||||| ||||||    
T  25308 ctaattctcacttattctattaaataataaaaataatcatttaatcaaatac 25257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 10348 - 10399
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  10348 ctaattctcacttattctattaaataataaaaatagccatttaataaaatac 10399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 4142 - 4193
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| |||||  |  |||||||||||||||    
T  4142 ctaattctcacttattctattaaataataaaaatagccatttaataaaatac 4193  T

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Target: scaffold0064 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 29483 - 29432
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||| ||||||||| |||||  | ||||||||||||||||    
T  29483 ctaattctcacttattttattaaataataaaaatagtcatttaataaaatac 29432  T

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Target: scaffold0064; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 41474 - 41423
Alignment:
Q  18 ctaattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||| ||||||||| |||||  | ||||||||||||||||    
T  41474 ctaattctcacttattttattaaataataaaaatagtcatttaataaaatac 41423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 189984 - 190043
Alignment:
Q  19 taattctcacttattctattaaatagtaaaataactcatttaataaaatac-ccacaaca 77  Q
    |||||| |||||||||||||||||| |||||  | |||||||||||||||| ||||||||    
T  189984 taattcccacttattctattaaataataaaaatagtcatttaataaaatacaccacaaca 190043  T

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Target: scaffold0395 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 7550 - 7504
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||  | |||||||||||||||    
T  7550 ttctcacttattctattaaataataaaaatagtcatttaataaaata 7504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 47755 - 47800
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  47755 ttctcacttattctattaaataataaaat-agtcatttaataaaata 47800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 54094 - 54144
Alignment:
Q  19 taattctcacttattctattaaatagtaaaataactcatttaataaaatac 69  Q
    |||||||||||||||||| | ||||  ||||||| ||||||||||||||||    
T  54094 taattctcacttattctaattaataccaaaataaatcatttaataaaatac 54144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 132977 - 132932
Alignment:
Q  22 ttctcacttattctattaaatagtaaaataactcatttaataaaata 68  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  132977 ttctcacttattctattaaataataaaat-agtcatttaataaaata 132932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 35765 - 35818
Alignment:
Q  18 ctaattctcac-ttattctattaaatagtaaaa-taactcatttaataaaatac 69  Q
    ||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||    
T  35765 ctaattctcacattattctattaaatactaaaaataaatcatttaataaaatac 35818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 867 - 918
Alignment:
Q  18 ctaattctcacttattctattaaatagt-aaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| | |||||| | |||||||||||||||    
T  867 ctaattctcacttattctattaaataatgaaaatagc-catttaataaaatac 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 15767 - 15716
Alignment:
Q  18 ctaattctcacttattctattaaatagt-aaaataactcatttaataaaatac 69  Q
    |||||||||||||||||||||||||| | |||||| | |||||||||||||||    
T  15767 ctaattctcacttattctattaaataatgaaaatagc-catttaataaaatac 15716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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