View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0881_low_11 (Length: 391)

Name: NF0881_low_11
Description: NF0881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0881_low_11
NF0881_low_11
[»] chr6 (18 HSPs)
chr6 (29-143)||(16866230-16866350)
chr6 (164-250)||(20112233-20112319)
chr6 (182-250)||(18378793-18378861)
chr6 (164-250)||(21625638-21625724)
chr6 (182-250)||(13602693-13602761)
chr6 (171-251)||(25593063-25593143)
chr6 (164-250)||(22802658-22802744)
chr6 (85-146)||(16792433-16792493)
chr6 (182-240)||(31126931-31126988)
chr6 (208-248)||(29918543-29918583)
chr6 (208-250)||(13913707-13913749)
chr6 (164-250)||(19483319-19483405)
chr6 (174-240)||(20462430-20462495)
chr6 (182-248)||(25686164-25686229)
chr6 (209-250)||(19461473-19461514)
chr6 (182-250)||(18543621-18543688)
chr6 (182-250)||(19288815-19288882)
chr6 (184-248)||(25734985-25735048)
[»] chr1 (14 HSPs)
chr1 (164-250)||(20953912-20953998)
chr1 (164-250)||(36134712-36134798)
chr1 (171-251)||(20109431-20109511)
chr1 (164-250)||(19718047-19718133)
chr1 (171-250)||(20255591-20255669)
chr1 (164-250)||(21134618-21134704)
chr1 (182-250)||(20883345-20883412)
chr1 (164-250)||(22464248-22464334)
chr1 (182-250)||(22643447-22643514)
chr1 (182-250)||(23067498-23067565)
chr1 (182-240)||(18516673-18516730)
chr1 (209-250)||(153799-153840)
chr1 (182-250)||(19169819-19169886)
chr1 (171-251)||(20909965-20910045)
[»] scaffold0004 (1 HSPs)
scaffold0004 (164-250)||(30359-30444)
[»] chr7 (23 HSPs)
chr7 (164-250)||(13260161-13260247)
chr7 (160-250)||(13649234-13649324)
chr7 (160-250)||(16316109-16316199)
chr7 (164-250)||(22577557-22577643)
chr7 (182-250)||(13031642-13031710)
chr7 (164-250)||(21695887-21695973)
chr7 (182-250)||(14427048-14427116)
chr7 (182-250)||(48236492-48236560)
chr7 (164-250)||(9709377-9709462)
chr7 (182-250)||(12173879-12173947)
chr7 (171-251)||(13171950-13172030)
chr7 (175-251)||(14303936-14304012)
chr7 (164-250)||(4428589-4428675)
chr7 (184-250)||(16556363-16556429)
chr7 (184-250)||(16609233-16609299)
chr7 (186-250)||(4822010-4822074)
chr7 (164-250)||(2265068-2265154)
chr7 (209-250)||(13137506-13137547)
chr7 (182-248)||(332188-332253)
chr7 (182-240)||(18361202-18361259)
chr7 (208-250)||(18419845-18419887)
chr7 (208-250)||(25214936-25214978)
chr7 (182-250)||(15217029-15217096)
[»] chr3 (23 HSPs)
chr3 (164-250)||(12962636-12962722)
chr3 (184-250)||(52920943-52921009)
chr3 (164-250)||(16658178-16658264)
chr3 (164-250)||(19884067-19884153)
chr3 (164-250)||(22141283-22141369)
chr3 (164-250)||(18142388-18142474)
chr3 (171-247)||(14008124-14008200)
chr3 (200-250)||(29951012-29951062)
chr3 (200-250)||(30000166-30000216)
chr3 (164-250)||(30053790-30053876)
chr3 (164-250)||(49665928-49666014)
chr3 (183-248)||(16812300-16812364)
chr3 (182-250)||(15833931-15833999)
chr3 (182-250)||(1054436-1054503)
chr3 (182-240)||(13654450-13654507)
chr3 (208-250)||(16391063-16391105)
chr3 (208-250)||(16670610-16670652)
chr3 (209-250)||(9005956-9005997)
chr3 (210-251)||(12397650-12397691)
chr3 (182-251)||(14131486-14131555)
chr3 (209-250)||(31113424-31113465)
chr3 (208-248)||(15226446-15226486)
chr3 (210-250)||(15662173-15662213)
[»] scaffold0120 (2 HSPs)
scaffold0120 (182-250)||(36280-36348)
scaffold0120 (182-250)||(42657-42725)
[»] scaffold0435 (1 HSPs)
scaffold0435 (164-250)||(4805-4891)
[»] scaffold0026 (1 HSPs)
scaffold0026 (164-250)||(8435-8521)
[»] scaffold0009 (1 HSPs)
scaffold0009 (164-250)||(9046-9132)
[»] chr8 (20 HSPs)
chr8 (164-250)||(20381916-20382002)
chr8 (182-250)||(24646868-24646936)
chr8 (164-250)||(23184776-23184862)
chr8 (182-250)||(19927576-19927644)
chr8 (162-250)||(21288932-21289020)
chr8 (182-250)||(15335594-15335662)
chr8 (182-250)||(15424659-15424727)
chr8 (182-250)||(15515963-15516031)
chr8 (171-250)||(22663685-22663764)
chr8 (182-250)||(3597881-3597949)
chr8 (182-250)||(23371303-23371370)
chr8 (182-248)||(18684962-18685028)
chr8 (182-248)||(18730527-18730593)
chr8 (205-250)||(22746001-22746046)
chr8 (182-250)||(20259092-20259159)
chr8 (182-250)||(21045722-21045789)
chr8 (182-238)||(23352641-23352697)
chr8 (208-250)||(3833481-3833523)
chr8 (209-250)||(23784071-23784112)
chr8 (209-250)||(30324811-30324852)
[»] chr5 (8 HSPs)
chr5 (164-250)||(88969-89055)
chr5 (182-250)||(30743547-30743615)
chr5 (164-250)||(5430396-5430482)
chr5 (182-250)||(21099242-21099310)
chr5 (162-250)||(21660761-21660849)
chr5 (182-248)||(23478913-23478978)
chr5 (209-250)||(1109778-1109819)
chr5 (182-250)||(13523734-13523801)
[»] chr4 (12 HSPs)
chr4 (164-250)||(19620586-19620671)
chr4 (182-250)||(13004401-13004469)
chr4 (182-250)||(15139760-15139828)
chr4 (164-250)||(13575644-13575729)
chr4 (182-250)||(10291267-10291334)
chr4 (182-250)||(11536609-11536676)
chr4 (208-252)||(11515796-11515840)
chr4 (182-250)||(14777904-14777971)
chr4 (207-250)||(15474683-15474726)
chr4 (209-250)||(15206870-15206911)
chr4 (182-239)||(19887885-19887941)
chr4 (211-247)||(18776504-18776540)
[»] scaffold0261 (1 HSPs)
scaffold0261 (182-250)||(4281-4349)
[»] scaffold0395 (1 HSPs)
scaffold0395 (164-250)||(13022-13106)
[»] scaffold0227 (1 HSPs)
scaffold0227 (182-249)||(23200-23267)
[»] scaffold0243 (1 HSPs)
scaffold0243 (164-250)||(4498-4584)
[»] scaffold0084 (1 HSPs)
scaffold0084 (164-250)||(32958-33044)
[»] scaffold0081 (1 HSPs)
scaffold0081 (180-250)||(41188-41258)
[»] scaffold0007 (1 HSPs)
scaffold0007 (164-250)||(143629-143715)
[»] chr2 (10 HSPs)
chr2 (173-251)||(20569995-20570073)
chr2 (185-250)||(22318145-22318210)
chr2 (164-249)||(28711194-28711279)
chr2 (164-250)||(24377602-24377687)
chr2 (182-250)||(22454489-22454557)
chr2 (182-250)||(22751665-22751732)
chr2 (186-250)||(24850169-24850233)
chr2 (182-250)||(22764376-22764443)
chr2 (182-250)||(24814059-24814126)
chr2 (209-250)||(26867790-26867831)
[»] scaffold1359 (1 HSPs)
scaffold1359 (182-250)||(193-261)
[»] scaffold0173 (1 HSPs)
scaffold0173 (182-250)||(24860-24928)
[»] scaffold0028 (1 HSPs)
scaffold0028 (182-250)||(5114-5182)
[»] scaffold0426 (1 HSPs)
scaffold0426 (184-247)||(14153-14216)
[»] scaffold0066 (1 HSPs)
scaffold0066 (159-250)||(60366-60457)
[»] scaffold0387 (1 HSPs)
scaffold0387 (164-250)||(7933-8019)
[»] scaffold0056 (1 HSPs)
scaffold0056 (164-250)||(34293-34379)
[»] scaffold0473 (1 HSPs)
scaffold0473 (182-250)||(2227-2295)
[»] scaffold0177 (1 HSPs)
scaffold0177 (162-250)||(19868-19956)
[»] scaffold0011 (2 HSPs)
scaffold0011 (182-250)||(134894-134962)
scaffold0011 (182-251)||(60068-60137)
[»] scaffold0414 (1 HSPs)
scaffold0414 (171-250)||(6626-6705)
[»] scaffold0273 (1 HSPs)
scaffold0273 (164-250)||(11062-11148)
[»] scaffold0249 (1 HSPs)
scaffold0249 (164-250)||(17255-17340)
[»] scaffold0607 (1 HSPs)
scaffold0607 (182-250)||(7457-7525)
[»] scaffold0422 (1 HSPs)
scaffold0422 (182-250)||(12289-12356)
[»] scaffold0297 (1 HSPs)
scaffold0297 (182-250)||(17529-17596)
[»] scaffold0269 (1 HSPs)
scaffold0269 (162-250)||(7848-7936)
[»] scaffold0012 (1 HSPs)
scaffold0012 (182-250)||(128354-128421)
[»] scaffold0040 (2 HSPs)
scaffold0040 (171-250)||(995-1074)
scaffold0040 (182-250)||(70323-70390)
[»] scaffold0272 (1 HSPs)
scaffold0272 (208-250)||(12791-12833)
[»] scaffold0207 (1 HSPs)
scaffold0207 (164-250)||(21182-21268)
[»] scaffold0176 (1 HSPs)
scaffold0176 (184-250)||(9725-9791)
[»] scaffold0752 (1 HSPs)
scaffold0752 (209-250)||(2560-2601)
[»] scaffold0537 (1 HSPs)
scaffold0537 (182-250)||(4191-4258)
[»] scaffold0410 (1 HSPs)
scaffold0410 (182-250)||(7266-7333)
[»] scaffold0382 (1 HSPs)
scaffold0382 (182-250)||(10761-10828)
[»] scaffold0364 (1 HSPs)
scaffold0364 (174-238)||(9940-10003)
[»] scaffold0185 (1 HSPs)
scaffold0185 (182-250)||(9856-9923)
[»] scaffold0017 (2 HSPs)
scaffold0017 (182-250)||(176052-176119)
scaffold0017 (209-250)||(53358-53399)
[»] scaffold0014 (2 HSPs)
scaffold0014 (182-250)||(211255-211322)
scaffold0014 (182-250)||(217124-217191)
[»] scaffold0005 (1 HSPs)
scaffold0005 (182-250)||(61759-61826)
[»] scaffold0334 (1 HSPs)
scaffold0334 (183-250)||(10332-10399)
[»] scaffold0738 (1 HSPs)
scaffold0738 (208-250)||(4185-4227)
[»] scaffold0670 (1 HSPs)
scaffold0670 (208-250)||(3712-3754)
[»] scaffold0151 (1 HSPs)
scaffold0151 (172-250)||(11937-12015)
[»] scaffold0411 (1 HSPs)
scaffold0411 (209-250)||(6668-6709)
[»] scaffold0018 (1 HSPs)
scaffold0018 (182-250)||(6003-6070)


Alignment Details
Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 16866230 - 16866350
Alignment:
Q  29 aagatatagctgcattcaccata---tgcaagttacagtcatgccaaaaattcaaccaac---taccaaaagcaatctctgtggcagtcatgcctacaaa 122  Q
    |||||||||||||||||||||     ||||||||||||||||||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||    
T  16866230 aagatatagctgcattcaccaccagttgcaagttacagtcatgccaaaatttcaaccaacctctaccaaaagcaatctctgtggcagtcatgcctacaaa 16866329  T
Q  123 aagcgatcgcttccatttaca 143  Q
    ||| |||||||||||||||||    
T  16866330 aagtgatcgcttccatttaca 16866350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 20112233 - 20112319
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| |||||||||  ||||||||||||| || ||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  20112233 agtactattggacttagggggagcttacaaaccttaaaccctaatagtcaacttgttaattagattaacaacaattgcacattttaa 20112319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 18378861 - 18378793
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||    
T  18378861 gggagcttacaaacctcaaacccttatagtcaacttgtttattagattaacaacaattgcacattttaa 18378793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 21625724 - 21625638
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  21625724 agtactattggactcagggggagcttacaaacctcatacccttatagtcaacttgttaattagattaacaacaattgcactttttaa 21625638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 13602761 - 13602693
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| ||| |||||||||||||||| ||||||||| |||||||||||||||    
T  13602761 gggagcttacaaacctcatacccttacagtcaacttgttaattagattaacaataattgcacattttaa 13602693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 25593143 - 25593063
Alignment:
Q  171 ttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaat 251  Q
    |||||||||  ||||||||||||| |||| ||| | |||||||||||||||||| ||||||||||||||  ||||||||||    
T  25593143 ttggacttagcgggagcttacaaacctcataccctaatagtcaacttgttaattagattaacaacaattaaacattttaat 25593063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 22802744 - 22802658
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| | ||||||||||||| |||||||| ||||||||||||||  |||||||||    
T  22802744 agtactattggactcagggggagcttacaaacctcatatctttatagtcaacgtgttaattagattaacaacaattaaacattttaa 22802658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 16792433 - 16792493
Alignment:
Q  85 ctaccaaaagcaatctctgtggcagtcatgcctacaaaaagcgatcgcttccatttacagta 146  Q
    |||||||||||||| ||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  16792433 ctaccaaaagcaatttctatggaaatcatgcctacaaaaa-cgatcgcttccatttacagta 16792493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 31126931 - 31126988
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattg 240  Q
    ||||||||||||| |||| ||||| | |||||||||||||||| |||||||||||||||    
T  31126931 gggagcttacaaacctcataccttaa-agtcaacttgttaattagattaacaacaattg 31126988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 29918583 - 29918543
Alignment:
Q  208 tagtcaacttgttaattggattaacaacaattgcacatttt 248  Q
    |||||||| |||||||| |||||||||||||||||||||||    
T  29918583 tagtcaacgtgttaattagattaacaacaattgcacatttt 29918543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 13913749 - 13913707
Alignment:
Q  208 tagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||    
T  13913749 tagtcaacttgttaattagatcaacaacaattgaacattttaa 13913707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 19483405 - 19483319
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| || |||| || ||||||||||||| |||  |||   | ||||||| |||||||| ||||||||||||||| |||||||||    
T  19483405 agtactatttgactcaaggggagcttacaaacctcctacccaaagagtcaacgtgttaattagattaacaacaattgaacattttaa 19483319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 20462495 - 20462430
Alignment:
Q  174 gacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattg 240  Q
    ||||||| ||||||||| ||| |||| ||| | | |||||||||||||||| |||||||||||||||    
T  20462495 gacttaatgggagcttaaaaacctcagaccctaa-agtcaacttgttaattagattaacaacaattg 20462430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 25686164 - 25686229
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacatttt 248  Q
    ||||||||||||| |||| ||||   ||||||||||||||||| ||| ||||||||||| |||||||    
T  25686164 gggagcttacaaacctcatacctag-tagtcaacttgttaattagatcaacaacaattgaacatttt 25686229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 19461473 - 19461514
Alignment:
Q  209 agtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||||| ||| ||||||||||| |||||||||    
T  19461473 agtcaacttgttaattagatcaacaacaattgaacattttaa 19461514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 18543688 - 18543621
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||   |||||||||| |||||| ||| ||||||||||| |||||||||    
T  18543688 gggagcttacaaacctcatacctag-tagtcaacttcttaattagatcaacaacaattgaacattttaa 18543621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 19288815 - 19288882
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||  | |||||||||||||||| ||| ||||||||||| ||| |||||    
T  19288815 gggagcttacaaacctcatacctaga-agtcaacttgttaattagatcaacaacaattgaacactttaa 19288882  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 25734985 - 25735048
Alignment:
Q  184 gagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacatttt 248  Q
    ||||||||||| |||| |||||  ||||||||||||||||| ||| ||||| ||||| |||||||    
T  25734985 gagcttacaaacctcataccttg-tagtcaacttgttaattagatcaacaagaattgaacatttt 25735048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 7e-25; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 20953912 - 20953998
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| |||||||||  | ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  20953912 agtactattggacttagggagagcttacaaacctcaaacccttatagtcaacttgttaattagattaacaacaattgcacattttaa 20953998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 36134798 - 36134712
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  36134798 agtactattggactcagggggagcttacaaacctcatacccttatactcaacttgttaattagattaacaacaattgcacattttaa 36134712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 20109431 - 20109511
Alignment:
Q  171 ttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaat 251  Q
    |||||||||  ||||||||||||| |||| ||| | |||||||||||||||||| | ||||||||||||| ||||||||||    
T  20109431 ttggacttagggggagcttacaaacctcagaccctaatagtcaacttgttaattaggttaacaacaattgaacattttaat 20109511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 19718133 - 19718047
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| || |||| | |||||||||||||| |||| ||| ||| |||||||||||||||| |||||||||||||| || |||||||    
T  19718133 agtactattagactcagagggagcttacaaacctcatacccttaaagtcaacttgttaattagattaacaacaattacatattttaa 19718047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 20255669 - 20255591
Alignment:
Q  171 ttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||  ||||||||||||| |||| ||||   ||||||||||||||||||||| ||||||||||| |||||||||    
T  20255669 ttggacttagggggagcttacaaacctcatacctgg-tagtcaacttgttaattggatcaacaacaattgaacattttaa 20255591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 21134618 - 21134704
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||| | ||||||||  |||||||| ||||||||||||||| |||||||||    
T  21134618 agtactattggactcagggggagcttacaaacctcataccctaatagtcaaagtgttaattagattaacaacaattgaacattttaa 21134704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 20883345 - 20883412
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| |||||  ||||||||||||||||| ||| ||||||||||| |||||||||    
T  20883345 gggagcttacaaacctcataccttg-tagtcaacttgttaattagatcaacaacaattgaacattttaa 20883412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 22464248 - 22464334
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| |||| |||||||||| |||| ||| ||||||||| |||||  ||||||||    
T  22464248 agtactattggactcagggggagcttacaaacctcatacctctatagtcaacgtgttcattagattaacaaaaattgagcattttaa 22464334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 22643514 - 22643447
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||   ||||||||||||||||| ||| ||||||||||| |||||||||    
T  22643514 gggagcttacaaacctcatacctgg-tagtcaacttgttaattagatcaacaacaattgaacattttaa 22643447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 23067565 - 23067498
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||   ||||||||||||||||| ||| ||||||||||| |||||||||    
T  23067565 gggagcttacaaacctcatacctgg-tagtcaacttgttaattagatcaacaacaattgaacattttaa 23067498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 18516673 - 18516730
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattg 240  Q
    ||||||||||||| |||| ||| | | |||||||||||||||| |||||||||||||||    
T  18516673 gggagcttacaaacctcagaccctaa-agtcaacttgttaattagattaacaacaattg 18516730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 153799 - 153840
Alignment:
Q  209 agtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||| |||||| ||||||||||||||| |||||||||    
T  153799 agtcaacttattaattagattaacaacaattgaacattttaa 153840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 19169819 - 19169886
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| || || | |||||||||||||||| ||| ||||||||||| | |||||||    
T  19169819 gggagcttacaaacctcatac-ttgagagtcaacttgttaattagatcaacaacaattgaaaattttaa 19169886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 20910045 - 20909965
Alignment:
Q  171 ttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaat 251  Q
    |||||||||  ||||||||||||| |||| ||| | | |||  |||||||||||  |||||||||||||| ||||| ||||    
T  20910045 ttggacttagggggagcttacaaacctcagaccctaaaagtttacttgttaattaaattaacaacaattgaacattgtaat 20909965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 30359 - 30444
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| |||||||||  ||||||||||||| |||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  30359 agtactattggacttag-gggagcttacaaacctcatacccttatagtcaacttgttaattagattaacaacaattgcacattttaa 30444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 13260161 - 13260247
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| || ||||||  ||||||||||||| |||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  13260161 agtactattcgacttagggggagcttacaaacctcatacccttatagtcaacttgttaattagattaacaacaattgcacattttaa 13260247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 13649324 - 13649234
Alignment:
Q  160 ttagagtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||| |||||||||  |||| ||||||||  ||||||| |||||||||||||||||||| ||||||||| |||||||||||||||    
T  13649324 ttagagtactattggacttagggggaacttacaaacttcaaacccttatagtcaacttgttaattagattaacaataattgcacattttaa 13649234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 16316109 - 16316199
Alignment:
Q  160 ttagagtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||| ||| |||||  ||||||||||||| |||||| | |||||| ||||||||||||| |||||||||||||||||||||||||    
T  16316109 ttagagtactattgtacttagggggagcttacaaacctcaaatccttatagccaacttgttaattagattaacaacaattgcacattttaa 16316199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 22577557 - 22577643
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| | |||||||  ||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  22577557 agtactataggacttagggggagcttacaaacctcaaacccttatactcaacttgttaattagattaacaacaattgcacattttaa 22577643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 13031642 - 13031710
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||| ||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  13031642 gggagcttaaaaacctcaaacccttatagtcaacttgttaattagattaacaacaattgcacattttaa 13031710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 21695973 - 21695887
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| || ||||||  ||||| ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||||||||||||    
T  21695973 agtactattcgacttagggggagattacaaacctcaaacccttacagtcaacttgttaattagattaacaacaattgcacattttaa 21695887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 14427116 - 14427048
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| ||||||||||| |||||||| ||||||||||||||| |||||||||    
T  14427116 gggagcttacaaacctcatacccttatagtcaacgtgttaattagattaacaacaattgaacattttaa 14427048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 48236492 - 48236560
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| ||||||||||| |||||||| ||||||||||||||| |||||||||    
T  48236492 gggagcttacaaacctcatacccttatagtcaacgtgttaattagattaacaacaattgaacattttaa 48236560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 9709377 - 9709462
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||||| ||||||||| |||||||| ||||||||||||||| |||||||||    
T  9709377 agtactattggactcagggggagcttacaaacctcatacctt-atagtcaacgtgttaattagattaacaacaattgaacattttaa 9709462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 12173879 - 12173947
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||| ||| |||| ||| ||||||||||| |||||||| ||||||||||||||| |||||||||    
T  12173879 gggagcttagaaacctcatacccttatagtcaacgtgttaattagattaacaacaattgaacattttaa 12173947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 13171950 - 13172030
Alignment:
Q  171 ttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaat 251  Q
    |||||||||  ||||||||||||| |||| ||| | | |||||||||||||||| ||||||||||||||| || |||||||    
T  13171950 ttggacttagggggagcttacaaacctcataccctaaaagtcaacttgttaattagattaacaacaattgaactttttaat 13172030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 14303936 - 14304012
Alignment:
Q  175 acttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaat 251  Q
    ||||| |||||||||||||| |||| ||| | | ||||||||||||||||  |||||||||||||| ||||||||||    
T  14303936 acttagagggagcttacaaacctcagaccctaaaagtcaacttgttaattaaattaacaacaattgaacattttaat 14304012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 4428589 - 4428675
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||| | || |||||| |||||||| ||||||||||||||| |||||||||    
T  4428589 agtactattggactaagggggagcttacaaacctcataccctaattgtcaacgtgttaattagattaacaacaattgaacattttaa 4428675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 16556363 - 16556429
Alignment:
Q  184 gagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||| |||| ||| ||||||||||| |||||||| ||||||||||||||| | |||||||    
T  16556363 gagcttacaaacctcatacccttatagtcaacgtgttaattagattaacaacaattgaatattttaa 16556429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 16609299 - 16609233
Alignment:
Q  184 gagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||| |||| ||| ||||||||||| |||||||| ||||||||||||||| | |||||||    
T  16609299 gagcttacaaacctcatacccttatagtcaacgtgttaattagattaacaacaattgaatattttaa 16609233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 4822074 - 4822010
Alignment:
Q  186 gcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||| |||| ||| ||||||||||| | |||||| ||||||||||||||| |||||||||    
T  4822074 gcttacaaacctcatacccttatagtcaacgttttaattagattaacaacaattgaacattttaa 4822010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 2265068 - 2265154
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||| | | || |||| |||||||| ||||||||||||||| |||||||||    
T  2265068 agtactattggactcagggggagcttacaaacctcataccctcacagacaacgtgttaattagattaacaacaattgaacattttaa 2265154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 13137506 - 13137547
Alignment:
Q  209 agtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  13137506 agtcaacttgttaattggattaataacaattacacattttaa 13137547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 248
Target Start/End: Complemental strand, 332253 - 332188
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacatttt 248  Q
    ||||||||||||| |||| ||| | | | |||||||||||||| ||||||||||||||||| |||||    
T  332253 gggagcttacaaacctcataccct-acattcaacttgttaattagattaacaacaattgcaaatttt 332188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 18361202 - 18361259
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattg 240  Q
    ||||||||||||| |||| ||| | | |||||||||||||||| |||||||||||||||    
T  18361202 gggagcttacaaacctcagaccctaa-agtcaacttgttaattagattaacaacaattg 18361259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 18419887 - 18419845
Alignment:
Q  208 tagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||    
T  18419887 tagtcaacttgttaatttgatcaacaacaattgaacattttaa 18419845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 25214936 - 25214978
Alignment:
Q  208 tagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||    
T  25214936 tagtcaacttgttaattagatcaacaacaattgaacattttaa 25214978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 15217096 - 15217029
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||   |||||| |||||||||| ||| ||||||||||| |||||||||    
T  15217096 gggagcttacaaacctcatacctag-tagtcatcttgttaattagatcaacaacaattgaacattttaa 15217029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 12962636 - 12962722
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| || ||||||||| ||| |||||||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  12962636 agtactattggactcaaggggagcttataaacctcaaacccttatagtcaacttgttaattagattaacaacaattacacattttaa 12962722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 52921009 - 52920943
Alignment:
Q  184 gagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  52921009 gagcttacaaacctcaaacccttatagtcaacttgttaattagattaacaacaattgcacattttaa 52920943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 16658178 - 16658264
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  16658178 agtactattggactcagggggagcttacaaacctcatacccttatattcaacttgttaattagattaacaacaattgcacattttaa 16658264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 19884067 - 19884153
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||| ||| |||||||||||||| || | ||| ||||| |||| ||||||||| |||||||||||||||||||||||||    
T  19884067 agtactattggatttagagggagcttacaaaccttatacccttataatcaaattgttaattagattaacaacaattgcacattttaa 19884153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 22141369 - 22141283
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| || ||||||||||||| |||| ||| | ||||||||| |||||||| ||||||||||||||| |||||||||    
T  22141369 agtactattggactcaaggggagcttacaaacctcataccctaatagtcaacgtgttaattagattaacaacaattgaacattttaa 22141283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 18142388 - 18142474
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| |||||||||  |||||| | |||| |||| ||| |||||||||||||||||||| |||||||||||||| ||| ||||||    
T  18142388 agtactattggacttagggggagcattcaaacctcatacccttatagtcaacttgttaattagattaacaacaattacactttttaa 18142474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 14008200 - 14008124
Alignment:
Q  171 ttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattt 247  Q
    |||||||||  ||||||||||||| |||| ||| | | |||||||||||||||| ||||||||||||||| ||||||    
T  14008200 ttggacttagggggagcttacaaacctcagaccctaaaagtcaacttgttaattagattaacaacaattgaacattt 14008124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 29951012 - 29951062
Alignment:
Q  200 aacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||| ||| |||||||||||||||| |||||||||||||||||||||||||    
T  29951012 aacccttaaagtcaacttgttaattagattaacaacaattgcacattttaa 29951062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 30000166 - 30000216
Alignment:
Q  200 aacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||| ||| |||||||||||||||| |||||||||||||||||||||||||    
T  30000166 aacccttaaagtcaacttgttaattagattaacaacaattgcacattttaa 30000216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 30053790 - 30053876
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||| | || |||||| |||||||| ||||||||||||||| |||||||||    
T  30053790 agtactattggactaagggggagcttacaaacctcataccctaatggtcaacgtgttaattagattaacaacaattgaacattttaa 30053876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 49665928 - 49666014
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||| | ||| ||||| |||||||| ||||||||||||||| |||||||||    
T  49665928 agtactattggactcagggggagcttacaaacctcataccctaataatcaacgtgttaattagattaacaacaattgaacattttaa 49666014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 16812364 - 16812300
Alignment:
Q  183 ggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacatttt 248  Q
    |||||||||||| |||| ||| | |||||||||||||||||| ||||||||||||||| |||||||    
T  16812364 ggagcttacaaacctcataccct-atagtcaacttgttaattagattaacaacaattgtacatttt 16812300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 15833999 - 15833931
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| |||   ||||||||| |||||||| ||||||||||||||| |||||||||    
T  15833999 gggagcttacaaacctcatacccaaatagtcaacgtgttaattagattaacaacaattgaacattttaa 15833931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 1054503 - 1054436
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||   ||||||||||||||||| ||| ||||||||||| |||||||||    
T  1054503 gggagcttacaaacctcatacctag-tagtcaacttgttaattagatcaacaacaattgaacattttaa 1054436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 13654507 - 13654450
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattg 240  Q
    ||||||||||||| |||| ||| | | |||||||||||||||| |||||||||||||||    
T  13654507 gggagcttacaaacctcagaccctaa-agtcaacttgttaattagattaacaacaattg 13654450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 16391063 - 16391105
Alignment:
Q  208 tagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||| |||||| ||||||||||||||| |||||||||    
T  16391063 tagtcaacttattaattagattaacaacaattgaacattttaa 16391105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 16670610 - 16670652
Alignment:
Q  208 tagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||    
T  16670610 tagtcaacttgttaattagatcaacaacaattgaacattttaa 16670652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 9005956 - 9005997
Alignment:
Q  209 agtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||||| ||| ||||||||||| |||||||||    
T  9005956 agtcaacttgttaattagatcaacaacaattgaacattttaa 9005997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 12397691 - 12397650
Alignment:
Q  210 gtcaacttgttaattggattaacaacaattgcacattttaat 251  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||    
T  12397691 gtcaacttgttaattagattaacaacaattgaacaatttaat 12397650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 14131486 - 14131555
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaat 251  Q
    |||| |||||||| |||| ||| | | |||||||||||||||| ||||| ||||||||| || |||||||    
T  14131486 gggaccttacaaacctcagaccctaaaagtcaacttgttaattagattaccaacaattgaactttttaat 14131555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 31113424 - 31113465
Alignment:
Q  209 agtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||||| ||| ||||||||||| |||||||||    
T  31113424 agtcaacttgttaattagatcaacaacaattgaacattttaa 31113465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 15226446 - 15226486
Alignment:
Q  208 tagtcaacttgttaattggattaacaacaattgcacatttt 248  Q
    ||||||||||||||||| ||| ||||||||||| |||||||    
T  15226446 tagtcaacttgttaattagatcaacaacaattgaacatttt 15226486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 15662173 - 15662213
Alignment:
Q  210 gtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  15662173 gtcaacttgttaattagatcaacaacaattgaacattttaa 15662213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 36280 - 36348
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  36280 gggagcttacaaacctcaaacccttatagtcaacttgataattagattaacaacaattgcacattttaa 36348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 42725 - 42657
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  42725 gggagcttacaaacctcaaacccttatagtcaacttgataattagattaacaacaattgcacattttaa 42657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 4805 - 4891
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| |||||||||  ||||||||||||| |||| ||| ||  |||||||||||||||| |||||||||||||||||||||||||    
T  4805 agtactattggacttagggggagcttacaaacctcataccctttaagtcaacttgttaattagattaacaacaattgcacattttaa 4891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 8521 - 8435
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||| ||| || ||||||||||||| |||| ||| |||||||||||||||||||| ||||||||| |||||||||||||||    
T  8521 agtactattgaactcaatgggagcttacaaacctcatacccttatagtcaacttgttaattagattaacaataattgcacattttaa 8435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 9046 - 9132
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||  ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  9046 agtactattggactcagggggagcttacaaacctcgtacccttatagtcaacttgttaattagattaacaacaattgcacattttaa 9132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 20381916 - 20382002
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  20381916 agtactattggactcagggggagcttacaaacctcatacccttataatcaacttgttaattagattaacaacaattgcacattttaa 20382002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 24646936 - 24646868
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||  ||||||| |||||||||||||||||||| |||||| ||||||||||||||||||    
T  24646936 gggagcttacaaacttcaaacccttatagtcaacttgttaattagattaaaaacaattgcacattttaa 24646868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 23184776 - 23184862
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||| |||||  ||||||||||||| |||| | ||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  23184776 agtactattgaacttagggggagcttacaaacctcatatctttatagtcaacgtgttaattagattaacaacaattgaacattttaa 23184862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 19927644 - 19927576
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| ||||||||||| |||||||| ||||||||||||||| |||||||||    
T  19927644 gggagcttacaaacctcatacccttatagtcaacgtgttaattagattaacaacaattgaacattttaa 19927576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 21289020 - 21288932
Alignment:
Q  162 agagtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||| |||||||||  ||||||||||||| |||| ||| |  |||||||| |||||||| ||||||||||||||| |||||||||    
T  21289020 agagtactattggacttagggggagcttacaaacctcataccctattagtcaacgtgttaattagattaacaacaattgaacattttaa 21288932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 15335594 - 15335662
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| | ||||||||| |||||||| ||||||||||||||| |||||||||    
T  15335594 gggagcttacaaacctcataccctaatagtcaacatgttaattagattaacaacaattgaacattttaa 15335662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 15424659 - 15424727
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| | ||||||||| |||||||| ||||||||||||||| |||||||||    
T  15424659 gggagcttacaaacctcataccctaatagtcaacatgttaattagattaacaacaattgaacattttaa 15424727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 15515963 - 15516031
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| | ||||||||| |||||||| ||||||||||||||| |||||||||    
T  15515963 gggagcttacaaacctcataccctaatagtcaacatgttaattagattaacaacaattgaacattttaa 15516031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 22663764 - 22663685
Alignment:
Q  171 ttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||| || ||||||||||||| |||| ||| ||| ||||||| ||||||||  |||||||||||||| |||||||||    
T  22663764 ttggactcaaggggagcttacaaacctcatacccttaaagtcaacgtgttaattaaattaacaacaattgaacattttaa 22663685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 3597881 - 3597949
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| | ||||||||| |||||||| |||||||| |||||| |||||||||    
T  3597881 gggagcttacaaacctcataccctaatagtcaacgtgttaattagattaacaccaattgaacattttaa 3597949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 23371370 - 23371303
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||||||| ||||   ||||||||||||||||| ||| ||||||||||| |||||||||    
T  23371370 gggagcttacaaaactcatacctag-tagtcaacttgttaattagatcaacaacaattgaacattttaa 23371303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 18684962 - 18685028
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacatttt 248  Q
    ||||||||||||| |||| ||| ||| ||| ||||||||||||  |||||||||||||| |||||||    
T  18684962 gggagcttacaaacctcatacccttaaagttaacttgttaattaaattaacaacaattgaacatttt 18685028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 18730527 - 18730593
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacatttt 248  Q
    ||||||||||||| |||| ||| ||| ||| ||||||||||||  |||||||||||||| |||||||    
T  18730527 gggagcttacaaacctcatacccttaaagttaacttgttaattaaattaacaacaattgaacatttt 18730593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 22746046 - 22746001
Alignment:
Q  205 ttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||    
T  22746046 ttatagtcaacttgttaattagattagcaacaattgcactttttaa 22746001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 20259092 - 20259159
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||   ||||||||||||||||| ||| ||||||||||| |||||||||    
T  20259092 gggagcttacaaacctcatacctag-tagtcaacttgttaattagatcaacaacaattgaacattttaa 20259159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 21045722 - 21045789
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||   ||||||||||||||||| ||| ||||||||||| |||||||||    
T  21045722 gggagcttacaaacctcatacctag-tagtcaacttgttaattagatcaacaacaattgaacattttaa 21045789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 23352641 - 23352697
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaat 238  Q
    ||||||||||||| |||| ||| | | |||||||||||||||| |||||||||||||    
T  23352641 gggagcttacaaacctcagaccctaaaagtcaacttgttaattagattaacaacaat 23352697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 3833523 - 3833481
Alignment:
Q  208 tagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||    
T  3833523 tagtcaacttgttaattagatcaacaacaattgaacattttaa 3833481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 23784112 - 23784071
Alignment:
Q  209 agtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||||| ||| ||||||||||| |||||||||    
T  23784112 agtcaacttgttaattagatcaacaacaattgaacattttaa 23784071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 30324811 - 30324852
Alignment:
Q  209 agtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||| |||||| ||||||||||||||| |||||||||    
T  30324811 agtcaacttattaattagattaacaacaattgaacattttaa 30324852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 88969 - 89055
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||| |||||||||| ||||||||| |||||||||||||||||||||||||    
T  88969 agtactattggactcagggggagcttacaaacctcatacccttatagtcaaattgttaattagattaacaacaattgcacattttaa 89055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 30743615 - 30743547
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| ||||||||||| |||||||| ||||||||||||||| |||||||||    
T  30743615 gggagcttacaaacctcatacccttatagtcaacgtgttaattagattaacaacaattgaacattttaa 30743547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 5430482 - 5430396
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||| ||||||||||| ||||| || ||||||||||||||| |||||||||    
T  5430482 agtactattggactcagggggagcttacaaacctcatacccttatagtcaacgtgttagttagattaacaacaattgaacattttaa 5430396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 21099242 - 21099310
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| ||| |||||| ||||||||| ||||||||||||||| |||||||||    
T  21099242 gggagcttacaaacctcatacccttaaagtcaatttgttaattagattaacaacaattgaacattttaa 21099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 21660849 - 21660761
Alignment:
Q  162 agagtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||| |||||||||  ||||||||||||| |||  ||||  ||| ||||| |||||||| ||||||||||||||| |||||||||    
T  21660849 agagtactattggacttagggggagcttacaaacctcttacctaaatattcaacgtgttaattagattaacaacaattgaacattttaa 21660761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 248
Target Start/End: Complemental strand, 23478978 - 23478913
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacatttt 248  Q
    ||||||||||||| |||| ||||  |||||||||||||||||| ||| ||||| ||||| |||||||    
T  23478978 gggagcttacaaacctcatacctg-atagtcaacttgttaattagatcaacaagaattgaacatttt 23478913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 1109819 - 1109778
Alignment:
Q  209 agtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||| |||||| ||||||||||||||| |||||||||    
T  1109819 agtcaacttattaattagattaacaacaattgaacattttaa 1109778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 13523801 - 13523734
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||   ||||||||||||||||| ||| ||||||||||| ||| |||||    
T  13523801 gggagcttacaaacctcatacctag-tagtcaacttgttaattagatcaacaacaattgaacagtttaa 13523734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 19620586 - 19620671
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| |||||||||  ||||||||||||| |||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  19620586 agtactattggacttag-gggagcttacaaacctcatacccttatagtcaacttgttaattaaattaacaacaattgcacattttaa 19620671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 13004401 - 13004469
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| || |||| |||||||||||||||| ||||||||||||||| |||||||||    
T  13004401 gggagcttacaaacctcatacttttaaagtcaacttgttaattagattaacaacaattgaacattttaa 13004469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 15139828 - 15139760
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| ||||||||  ||||||||| ||||||||| ||||||||||||||| |||||||||    
T  15139828 gggagcttacaaacctcaaacccatatagtcaatttgttaattagattaacaacaattgaacattttaa 15139760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 13575644 - 13575729
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||||| ||||||||| |||||||| ||||||||||||||| |||||||||    
T  13575644 agtactattggactcagggggagcttacaaacctcatacctt-atagtcaacgtgttaattagattaacaacaattgaacattttaa 13575729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 10291334 - 10291267
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||||||||   ||||||||||||||||| ||| ||||||||||| |||||||||    
T  10291334 gggagcttacaaacctcaaacctag-tagtcaacttgttaattagatcaacaacaattgaacattttaa 10291267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 11536676 - 11536609
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||||||||   ||||||||||||||||| ||| ||||||||||| |||||||||    
T  11536676 gggagcttacaaacctcaaacctag-tagtcaacttgttaattagatcaacaacaattgaacattttaa 11536609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 11515840 - 11515796
Alignment:
Q  208 tagtcaacttgttaattggattaacaacaattgcacattttaatt 252  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||    
T  11515840 tagtcaacttgttaattagatcaacaacaattgaacattttaatt 11515796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 14777904 - 14777971
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||  | |||||||||||||||| ||| ||||||||||| |||||||||    
T  14777904 gggagcttacaaacctcatacctgga-agtcaacttgttaattagatcaacaacaattgaacattttaa 14777971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 15474683 - 15474726
Alignment:
Q  207 atagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||| ||| ||||||||||||||| |||||||||    
T  15474683 atagtcaacttgttcattagattaacaacaattgaacattttaa 15474726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 15206870 - 15206911
Alignment:
Q  209 agtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||||| ||| ||||||||||| |||||||||    
T  15206870 agtcaacttgttaattagatcaacaacaattgaacattttaa 15206911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 19887885 - 19887941
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaatt 239  Q
    ||||||||||||| |||| ||| | | |||||||||||||||| ||||||||||||||    
T  19887885 gggagcttacaaacctcagaccctaa-agtcaacttgttaattagattaacaacaatt 19887941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 18776540 - 18776504
Alignment:
Q  211 tcaacttgttaattggattaacaacaattgcacattt 247  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  18776540 tcaacttgttaattagattaacaacaattgaacattt 18776504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 4281 - 4349
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  4281 gggagcttacaaaagtcaaacccttatggtcaacttgttaattagattaacaacaattgcatattttaa 4349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 13022 - 13106
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| || ||||||||||||| |||||||| ||||||||||||||||||||  ||||| ||||| ||||||||||||    
T  13022 agtactattggactcaaggggagcttacaaacctcaaacccttatagtcaacttgttaatt--attaaaaacaactgcacattttaa 13106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 23267 - 23200
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacatttta 249  Q
    ||||||||||||| |||| ||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  23267 gggagcttacaaacctcatacccttatagtcaacatgttaattagattaacaacaattgcacatttta 23200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 4498 - 4584
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  || |||||||||| |||| ||| ||| |||||||||||||||| |||||||||||||||||||||||||    
T  4498 agtactattggactcaggggcagcttacaaacctcatacccttacagtcaacttgttaattagattaacaacaattgcacattttaa 4584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 33044 - 32958
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| |||||||||  ||||||||||||| ||||||||  || | |||||||||||||| |||||||| ||||||||||||||||    
T  33044 agtactattggacttagggggagcttacaaacctcaaacccgtacaatcaacttgttaattagattaacagcaattgcacattttaa 32958  T

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Target: scaffold0081 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 41258 - 41188
Alignment:
Q  180 aagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||||||||| ||  |||||||||| ||||||||| ||||||||||||||| |||||||||    
T  41258 aagggagcttacaaaactcatactcttatagtcaatttgttaattagattaacaacaattgaacattttaa 41188  T

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Target: scaffold0007 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 143715 - 143629
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  || |||||||||| |||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  143715 agtactattggactcaggggaagcttacaaacctcatacccttatagtcaacttgttaattaaattaacaacaattgcacattttaa 143629  T

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Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 20570073 - 20569995
Alignment:
Q  173 ggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaat 251  Q
    |||||||  ||||||||||||| |||| ||| | |||||||||||||||||| ||||||||||||||| ||||||||||    
T  20570073 ggacttagggggagcttacaaacctcataccctaatagtcaacttgttaattagattaacaacaattgaacattttaat 20569995  T

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Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 22318210 - 22318145
Alignment:
Q  185 agcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||  ||| ||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  22318210 agcttacaaacttcatacccttttagtcaacttgttaattagattaacaacaattgcacattttaa 22318145  T

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Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 28711194 - 28711279
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacatttta 249  Q
    |||||| ||||||| |  ||||||||||||| |||| ||| ||||||||||| |||||||| ||||||||||||||| | ||||||    
T  28711194 agtactattggactcagggggagcttacaaacctcatacccttatagtcaacgtgttaattagattaacaacaattgaaaatttta 28711279  T

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Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 24377687 - 24377602
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||||   ||||||||||||| || | ||| ||| | |||||||||||||| |||||||||||||||||||||||||    
T  24377687 agtactattggactttgggggagcttacaaaccttatacccttaaa-tcaacttgttaattagattaacaacaattgcacattttaa 24377602  T

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Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 22454489 - 22454557
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||| ||||||| |||  ||| ||| |||||| ||||||||| |||||||||||||||||||||||||    
T  22454489 gggagattacaaacctcgtacccttaaagtcaatttgttaattagattaacaacaattgcacattttaa 22454557  T

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Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 22751665 - 22751732
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| |||||  ||||||||||||||||| ||| ||||||||||| |||||||||    
T  22751665 gggagcttacaaacctcataccttg-tagtcaacttgttaattagatcaacaacaattgaacattttaa 22751732  T

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Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 24850169 - 24850233
Alignment:
Q  186 gcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||| |||| ||| ||| | |||||||||||||| ||||||||| |||||||||||||||    
T  24850169 gcttacaaacctcatacccttaaattcaacttgttaattagattaacaaaaattgcacattttaa 24850233  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 22764443 - 22764376
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||   ||||||||||||||||| ||| ||||||||||| |||||||||    
T  22764443 gggagcttacaaacctcatacctag-tagtcaacttgttaattagatcaacaacaattgaacattttaa 22764376  T

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Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 24814059 - 24814126
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||  |||||||| ||||||||| ||| ||||||||||| |||||||||    
T  24814059 gggagcttacaaacctcatacctg-atagtcaatttgttaattagatcaacaacaattgaacattttaa 24814126  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 26867831 - 26867790
Alignment:
Q  209 agtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||||| ||| ||||||||||| |||||||||    
T  26867831 agtcaacttgttaattagatcaacaacaattgaacattttaa 26867790  T

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Target: scaffold1359 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 193 - 261
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| ||||||||||| |||||||| ||||||||||||||| |||||||||    
T  193 gggagcttacaaacctcatacccttatagtcaacgtgttaattagattaacaacaattgaacattttaa 261  T

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Target: scaffold0173 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 24860 - 24928
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| || |||| |||||||||||||||| ||||||||||||||| |||||||||    
T  24860 gggagcttacaaacctcatacttttaaagtcaacttgttaattagattaacaacaattgaacattttaa 24928  T

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Target: scaffold0028 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 5114 - 5182
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| ||||||||||| |||||||| ||||||||||||||| |||||||||    
T  5114 gggagcttacaaacctcatacccttatagtcaacatgttaattagattaacaacaattgaacattttaa 5182  T

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Target: scaffold0426 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 14216 - 14153
Alignment:
Q  184 gagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattt 247  Q
    ||||||||||| |||| ||| |||||||||||||||||||| ||||||||| ||||||||||||    
T  14216 gagcttacaaacctcatacccttatagtcaacttgttaattagattaacaataattgcacattt 14153  T

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Target: scaffold0066 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 60366 - 60457
Alignment:
Q  159 tttagagtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||| |||||| ||||||| |  ||||| ||||||| |||||||| |||||||||||||||||||| || ||| ||||| ||||||||||||    
T  60366 tttaaagtactattggactcagggggagtttacaaacctcaaacccttatagtcaacttgttaattagaataaaaacaactgcacattttaa 60457  T

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Target: scaffold0387 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 8019 - 7933
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| |||||||||  ||||||||||||| |||| |||   ||||||||| |||||||| ||||||||||||||| |||||||||    
T  8019 agtactattggacttagggggagcttacaaacctcatacccaaatagtcaacgtgttaattagattaacaacaattgaacattttaa 7933  T

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Target: scaffold0056 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 34293 - 34379
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||| | ||||||||| |||||||| ||||||||||||||| |||||||||    
T  34293 agtactattggactcagggggagcttacaaacctcataccctaatagtcaacgtgttaattagattaacaacaattgaacattttaa 34379  T

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Target: scaffold0473 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 2227 - 2295
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| | ||||||||| |||||||| ||||||||||||||| |||||||||    
T  2227 gggagcttacaaacctcataccctaatagtcaacgtgttaattagattaacaacaattgaacattttaa 2295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 19868 - 19956
Alignment:
Q  162 agagtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||| |||||||||  ||||||||||||| |||  |||   ||||||||| |||||||| ||||||||||||||| |||||||||    
T  19868 agagtactattggacttagggggagcttacaaacctcttaccaaaatagtcaacgtgttaattagattaacaacaattgaacattttaa 19956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 134894 - 134962
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| | ||||||||| |||||||| ||||||||||||||| |||||||||    
T  134894 gggagcttacaaacctcataccctaatagtcaacgtgttaattagattaacaacaattgaacattttaa 134962  T

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Target: scaffold0011; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 60137 - 60068
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaat 251  Q
    ||||||||||||| |||| ||  | | |||||||||||||||| ||||||||||||||| ||||||||||    
T  60137 gggagcttacaaacctcagactctaaaagtcaacttgttaattagattaacaacaattgaacattttaat 60068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 6626 - 6705
Alignment:
Q  171 ttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||| || ||||||||||||| |||| ||| ||| ||||||  |||||||| ||||||||||||||| |||||||||    
T  6626 ttggactcaaggggagcttacaaacctcatacccttaaagtcaatgtgttaattagattaacaacaattgaacattttaa 6705  T

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Target: scaffold0273 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 11148 - 11062
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| |  ||||||||||||| |||| ||| |||| |||||| |||||||| ||||||||| ||||| |||||||||    
T  11148 agtactattggactcagggggagcttacaaacctcatacccttatggtcaacatgttaattagattaacaataattgaacattttaa 11062  T

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Target: scaffold0249 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 17255 - 17340
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| ||||||| || |||||||||| ||||||| ||| | ||||||||| |||||||| ||||||||| ||||| |||||||||    
T  17255 agtactattggactcaaggggagcttac-aaactcataccctaatagtcaacatgttaattagattaacaataattgaacattttaa 17340  T

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Target: scaffold0607 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 7525 - 7457
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||| ||| ||||||| |||||||| ||||||||||| ||| |||||||||    
T  7525 gggagcttacaaacctcatacccttaaagtcaacgtgttaattagattaacaacagttgaacattttaa 7457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 12356 - 12289
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||  |||||||||||||||||| ||| ||||||||||| |||||||||    
T  12356 gggagcttacaaacctcatacctg-atagtcaacttgttaattagatcaacaacaattgaacattttaa 12289  T

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Target: scaffold0297 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 17596 - 17529
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| |||| | ||||||||||||||||| ||| ||||||||||| |||||||||    
T  17596 gggagcttacaaacctcatacctgt-tagtcaacttgttaattagatcaacaacaattgaacattttaa 17529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 7936 - 7848
Alignment:
Q  162 agagtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||| |||||||||  ||||||||||||| |||   ||   ||||||||| |||||||| ||||||||||||||| |||||||||    
T  7936 agagtactattggacttagggggagcttacaaacctctttccaaaatagtcaacgtgttaattagattaacaacaattgaacattttaa 7848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 128421 - 128354
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| |||||  ||||||||||||||||| ||| ||||||||||| |||||||||    
T  128421 gggagcttacaaacctcacaccttg-tagtcaacttgttaattagatcaacaacaattgaacattttaa 128354  T

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Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 995 - 1074
Alignment:
Q  171 ttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||| || ||| ||||||||| |||| ||| ||| ||||||||||||||||  ||||||||||| || |||||||||    
T  995 ttggactcaaggggggcttacaaacctcatacccttaaagtcaacttgttaattaaattaacaacaagtgaacattttaa 1074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 70390 - 70323
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||   ||||||||||||||||| ||| ||||||||||| |||||||||    
T  70390 gggagcttacaaacctcatacctag-tagtcaacttgttaattagatcaacaacaattgaacattttaa 70323  T

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Target: scaffold0272 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 12791 - 12833
Alignment:
Q  208 tagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  12791 tagtcaacttgttaattagattaacaacaattgaacattttaa 12833  T

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Target: scaffold0207 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 21268 - 21182
Alignment:
Q  164 agtactgttggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||| |||||||||  ||||||||||||| |||| |||   ||||||||| ||||||||  |||||||||||||| || ||||||    
T  21268 agtactattggacttagggggagcttacaaacctcatacccaaatagtcaacatgttaattaaattaacaacaattgaacgttttaa 21182  T

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Target: scaffold0176 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 9791 - 9725
Alignment:
Q  184 gagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||| |||| ||| ||| ||||||| ||||||||  |||||||||||||| |||||||||    
T  9791 gagcttacaaacctcatacccttaaagtcaacgtgttaattatattaacaacaattgaacattttaa 9725  T

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Target: scaffold0752 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 2601 - 2560
Alignment:
Q  209 agtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  2601 agtcaacttgttaattggatcaacaacaattgaacattttaa 2560  T

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Target: scaffold0537 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0537
Description:

Target: scaffold0537; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 4191 - 4258
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||   ||||||||||||||||| ||| ||||||||||| |||||||||    
T  4191 gggagcttacaaacctcatacctag-tagtcaacttgttaattagatcaacaacaattgaacattttaa 4258  T

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Target: scaffold0410 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 7333 - 7266
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||   ||||||||||||||||| ||| ||||||||||| |||||||||    
T  7333 gggagcttacaaacctcatacctag-tagtcaacttgttaattagatcaacaacaattgaacattttaa 7266  T

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Target: scaffold0382 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 10761 - 10828
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||  | |||||||||||||||| ||| ||||||||||| |||||||||    
T  10761 gggagcttacaaacctcatacctg-acagtcaacttgttaattagatcaacaacaattgaacattttaa 10828  T

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Target: scaffold0364 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 9940 - 10003
Alignment:
Q  174 gacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaat 238  Q
    ||||||| ||||||||||||| |||| ||| | | |||||||||||||||| |||||||||||||    
T  9940 gacttaaggggagcttacaaacctcataccctaa-agtcaacttgttaattagattaacaacaat 10003  T

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Target: scaffold0185 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 9923 - 9856
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| || | |||||  ||||||||||||||||| ||| ||||||||||| |||||||||    
T  9923 gggagcttacaaaccttataccttg-tagtcaacttgttaattagatcaacaacaattgaacattttaa 9856  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 176119 - 176052
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||||||||   ||||||||||||||||| ||| ||||||||||| | |||||||    
T  176119 gggagcttacaaacctcaaacctag-tagtcaacttgttaattagatcaacaacaattgaatattttaa 176052  T

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Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 53358 - 53399
Alignment:
Q  209 agtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||||| ||| ||||||||||| |||||||||    
T  53358 agtcaacttgttaattagatcaacaacaattgaacattttaa 53399  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 211322 - 211255
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||   ||||||||||||||||| ||| ||||||||||| |||||||||    
T  211322 gggagcttacaaacctcatacctag-tagtcaacttgttaattagatcaacaacaattgaacattttaa 211255  T

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Target: scaffold0014; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 217191 - 217124
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||   ||||||||||||||||| ||| ||||||||||| |||||||||    
T  217191 gggagcttacaaacctcatacctag-tagtcaacttgttaattagatcaacaacaattgaacattttaa 217124  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 61826 - 61759
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||  | |||||||||||||||| ||| ||||||||||| |||||||||    
T  61826 gggagcttacaaacctcatacctgga-agtcaacttgttaattagatcaacaacaattgaacattttaa 61759  T

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Target: scaffold0334 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 10399 - 10332
Alignment:
Q  183 ggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||| |||| |||||||| ||||| |||||||||||| | |||| |||||||||| | |||||||    
T  10399 ggagcttgcaaacctcaaacccttataatcaacttgttaactagattcacaacaattgaaaattttaa 10332  T

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Target: scaffold0738 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0738
Description:

Target: scaffold0738; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 4185 - 4227
Alignment:
Q  208 tagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||    
T  4185 tagtcaacttgttaattagatcaacaacaattgaacattttaa 4227  T

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Target: scaffold0670 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 3712 - 3754
Alignment:
Q  208 tagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||    
T  3712 tagtcaacttgttaattagatcaacaacaattgaacattttaa 3754  T

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Target: scaffold0151 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 12015 - 11937
Alignment:
Q  172 tggacttaaagggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||  ||||||||||||| |||| |||   ||||||| | |||||||| ||||||||||||||| || ||||||    
T  12015 tggacttagggggagcttacaaacctcatacccaaatagtcagcgtgttaattagattaacaacaattgaactttttaa 11937  T

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Target: scaffold0411 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 6668 - 6709
Alignment:
Q  209 agtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    |||||||||||||||| ||| ||||||||||| |||||||||    
T  6668 agtcaacttgttaattagatcaacaacaattgaacattttaa 6709  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 6003 - 6070
Alignment:
Q  182 gggagcttacaaaactcaaacctttatagtcaacttgttaattggattaacaacaattgcacattttaa 250  Q
    ||||||||||||| |||| ||||  | |||||| ||||||||| ||| ||||||||||| |||||||||    
T  6003 gggagcttacaaacctcatacctgaa-agtcaaattgttaattagatcaacaacaattgaacattttaa 6070  T

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