View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0881_low_50 (Length: 252)
Name: NF0881_low_50
Description: NF0881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0881_low_50 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 45712915 - 45712705
Alignment:
| Q |
30 |
ccaaatgaggcactacctagaatttcagcagacgcctttagcaaatcctgtaaatcaaacgttattccatcctgcctaaggaatataagcttgccttgtt |
129 |
Q |
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| T |
45712915 |
ccaaatgaggcactacctagaatttcagcagacgcctttagcaaatcctgtaaatcaaacgttattccatcctgcctaaggaatataagcttgccttgtt |
45712816 |
T |
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| Q |
130 |
ccccctttttggaatgtccatgactgtggcgatcatgcttaggactttcgggatcataatgttcggccaagcttttggttttcacataaactacaggagg |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45712815 |
ccccctttttggaatgtccatgactgtggcgatcatgcttaggactttcgggatcataatgttcggccaagcttttggttttcacataaactacaggagg |
45712716 |
T |
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| Q |
230 |
cttaacatatt |
240 |
Q |
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| T |
45712715 |
cttaacatatt |
45712705 |
T |
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