View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0881_low_52 (Length: 251)

Name: NF0881_low_52
Description: NF0881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0881_low_52
NF0881_low_52
[»] chr8 (83 HSPs)
chr8 (1-72)||(45471421-45471492)
chr8 (9-72)||(23888761-23888824)
chr8 (1-72)||(20025245-20025316)
chr8 (1-72)||(36728277-36728348)
chr8 (7-64)||(22473578-22473635)
chr8 (1-72)||(17907922-17907993)
chr8 (1-72)||(31723752-31723823)
chr8 (9-72)||(36405970-36406033)
chr8 (7-72)||(36733576-36733641)
chr8 (9-72)||(18815920-18815984)
chr8 (7-64)||(18819848-18819906)
chr8 (8-64)||(17217622-17217678)
chr8 (1-64)||(38988378-38988442)
chr8 (1-64)||(39019475-39019539)
chr8 (7-72)||(4381730-4381796)
chr8 (14-59)||(6102720-6102765)
chr8 (1-46)||(45471487-45471532)
chr8 (19-59)||(9220-9260)
chr8 (24-72)||(21513354-21513402)
chr8 (24-64)||(22318886-22318926)
chr8 (20-72)||(22584688-22584740)
chr8 (21-72)||(23947247-23947299)
chr8 (1-44)||(17217574-17217617)
chr8 (7-46)||(22473537-22473576)
chr8 (18-64)||(19699110-19699156)
chr8 (18-64)||(19929782-19929828)
chr8 (7-44)||(18820035-18820072)
chr8 (1-46)||(36406078-36406123)
chr8 (1-64)||(5760446-5760506)
chr8 (24-64)||(17979460-17979500)
chr8 (24-64)||(19128014-19128054)
chr8 (7-46)||(4381798-4381837)
chr8 (18-72)||(22244447-22244502)
chr8 (25-64)||(22995751-22995790)
chr8 (25-64)||(28397458-28397497)
chr8 (25-64)||(37515435-37515474)
chr8 (18-64)||(13665427-13665472)
chr8 (18-64)||(13724702-13724747)
chr8 (18-64)||(22253337-22253383)
chr8 (1-46)||(22318949-22318995)
chr8 (20-72)||(22259316-22259369)
chr8 (20-64)||(23418391-23418436)
chr8 (20-64)||(25849400-25849445)
chr8 (20-64)||(39695490-39695535)
chr8 (20-64)||(39695575-39695620)
chr8 (21-72)||(20084581-20084633)
chr8 (20-64)||(42818868-42818912)
chr8 (26-61)||(2419046-2419081)
chr8 (9-44)||(19699063-19699098)
chr8 (24-59)||(21580170-21580205)
chr8 (9-44)||(23888721-23888756)
chr8 (7-46)||(36406037-36406076)
chr8 (14-48)||(1484210-1484244)
chr8 (26-64)||(20179491-20179529)
chr8 (14-48)||(20403035-20403069)
chr8 (14-48)||(22001562-22001596)
chr8 (26-64)||(22381904-22381942)
chr8 (14-48)||(26225568-26225602)
chr8 (138-172)||(36728177-36728211)
chr8 (1-46)||(38988299-38988345)
chr8 (1-46)||(39019396-39019442)
chr8 (26-64)||(39937018-39937056)
chr8 (23-64)||(42266554-42266596)
chr8 (14-48)||(45291015-45291049)
chr8 (1-46)||(22473464-22473509)
chr8 (20-64)||(23669470-23669515)
chr8 (1-46)||(36728343-36728388)
chr8 (1-46)||(36733643-36733688)
chr8 (1-46)||(45471527-45471572)
chr8 (14-46)||(15203552-15203584)
chr8 (1-46)||(17979565-17979612)
chr8 (24-64)||(18760434-18760474)
chr8 (14-46)||(18833256-18833288)
chr8 (14-46)||(20046473-20046505)
chr8 (14-46)||(21580272-21580304)
chr8 (24-72)||(22344123-22344171)
chr8 (24-72)||(22355783-22355831)
chr8 (21-49)||(23888693-23888721)
chr8 (14-46)||(24713149-24713181)
chr8 (24-64)||(24713225-24713265)
chr8 (14-46)||(39937102-39937134)
chr8 (14-46)||(41598040-41598072)
chr8 (14-46)||(41681718-41681750)
[»] chr5 (53 HSPs)
chr5 (1-64)||(29914320-29914383)
chr5 (7-72)||(14026862-14026927)
chr5 (1-72)||(20470078-20470149)
chr5 (1-72)||(8504695-8504767)
chr5 (1-46)||(6551527-6551572)
chr5 (8-64)||(25250852-25250908)
chr5 (8-64)||(25314637-25314693)
chr5 (7-64)||(6551467-6551525)
chr5 (1-46)||(20470144-20470189)
chr5 (19-64)||(25742875-25742920)
chr5 (24-72)||(20198706-20198754)
chr5 (9-44)||(25250913-25250948)
chr5 (9-44)||(25314698-25314733)
chr5 (1-44)||(25742819-25742862)
chr5 (21-64)||(25743627-25743670)
chr5 (29-72)||(26749048-26749091)
chr5 (29-64)||(26761487-26761522)
chr5 (1-46)||(12355138-12355183)
chr5 (1-46)||(21619051-21619095)
chr5 (1-46)||(29914280-29914325)
chr5 (24-61)||(31454932-31454969)
chr5 (24-61)||(31455545-31455582)
chr5 (20-64)||(15796325-15796369)
chr5 (24-64)||(16605392-16605432)
chr5 (14-46)||(17874992-17875024)
chr5 (14-46)||(21558087-21558119)
chr5 (1-64)||(21618984-21619056)
chr5 (1-50)||(26748974-26749025)
chr5 (24-59)||(1628480-1628515)
chr5 (24-59)||(12122484-12122519)
chr5 (14-49)||(14047974-14048009)
chr5 (24-59)||(17875068-17875103)
chr5 (14-49)||(18319269-18319304)
chr5 (25-64)||(21330516-21330555)
chr5 (24-59)||(21558008-21558043)
chr5 (14-49)||(24066999-24067034)
chr5 (14-49)||(36155018-36155053)
chr5 (14-48)||(265088-265122)
chr5 (14-48)||(11581520-11581554)
chr5 (14-44)||(12122542-12122572)
chr5 (14-48)||(14047930-14047964)
chr5 (30-64)||(19920725-19920759)
chr5 (14-44)||(21309060-21309090)
chr5 (1-46)||(26761416-26761462)
chr5 (14-48)||(36155063-36155097)
chr5 (1-49)||(8834199-8834248)
chr5 (20-64)||(20565462-20565507)
chr5 (20-64)||(21406628-21406673)
chr5 (14-46)||(2154935-2154967)
chr5 (6-46)||(14026929-14026969)
chr5 (1-46)||(20198777-20198824)
chr5 (14-46)||(22411995-22412027)
chr5 (14-46)||(22412038-22412070)
[»] chr4 (62 HSPs)
chr4 (1-72)||(12622418-12622489)
chr4 (1-72)||(35659708-35659780)
chr4 (1-64)||(14629711-14629774)
chr4 (1-72)||(26444856-26444926)
chr4 (1-72)||(46225554-46225624)
chr4 (1-70)||(46740115-46740184)
chr4 (18-64)||(16027044-16027090)
chr4 (18-64)||(50160055-50160101)
chr4 (24-72)||(19566945-19566993)
chr4 (1-44)||(21061515-21061558)
chr4 (18-61)||(40906814-40906857)
chr4 (1-46)||(19567016-19567061)
chr4 (1-72)||(19734328-19734398)
chr4 (20-64)||(33244146-33244191)
chr4 (24-64)||(10357448-10357488)
chr4 (20-64)||(11424992-11425036)
chr4 (20-64)||(16042918-16042962)
chr4 (20-64)||(16997565-16997609)
chr4 (24-64)||(55582286-55582326)
chr4 (9-44)||(20519-20554)
chr4 (24-59)||(2425572-2425607)
chr4 (25-64)||(13592277-13592316)
chr4 (25-64)||(15791593-15791632)
chr4 (25-64)||(15791682-15791721)
chr4 (29-72)||(25512586-25512629)
chr4 (24-63)||(35812446-35812485)
chr4 (18-64)||(20604-20650)
chr4 (26-72)||(14507624-14507670)
chr4 (18-64)||(15364965-15365010)
chr4 (18-64)||(19738143-19738188)
chr4 (20-64)||(9637864-9637909)
chr4 (20-64)||(9871529-9871574)
chr4 (20-64)||(40229491-40229536)
chr4 (28-64)||(15042136-15042172)
chr4 (28-64)||(15112252-15112288)
chr4 (24-64)||(19609328-19609368)
chr4 (20-64)||(25090691-25090735)
chr4 (21-64)||(32467253-32467297)
chr4 (20-64)||(42874837-42874881)
chr4 (14-49)||(14280205-14280240)
chr4 (14-49)||(20149721-20149756)
chr4 (29-72)||(45315239-45315282)
chr4 (14-48)||(1837829-1837863)
chr4 (14-48)||(14280161-14280195)
chr4 (14-48)||(14718286-14718320)
chr4 (14-48)||(18239739-18239773)
chr4 (30-72)||(26922675-26922717)
chr4 (18-64)||(27995807-27995852)
chr4 (14-48)||(44102103-44102137)
chr4 (14-48)||(44773407-44773441)
chr4 (14-48)||(50222659-50222693)
chr4 (20-64)||(13036723-13036768)
chr4 (20-64)||(19435732-19435777)
chr4 (1-49)||(44024509-44024558)
chr4 (14-46)||(10357489-10357521)
chr4 (14-46)||(15042220-15042252)
chr4 (14-46)||(15112172-15112204)
chr4 (14-46)||(15355604-15355636)
chr4 (14-46)||(18215553-18215585)
chr4 (14-46)||(19609252-19609284)
chr4 (14-46)||(35812529-35812561)
chr4 (29-61)||(44024454-44024486)
[»] chr3 (94 HSPs)
chr3 (1-64)||(11191984-11192047)
chr3 (1-64)||(11562490-11562553)
chr3 (7-64)||(17207173-17207231)
chr3 (1-64)||(14519387-14519451)
chr3 (8-72)||(16044408-16044472)
chr3 (18-72)||(19569272-19569326)
chr3 (11-72)||(54331369-54331431)
chr3 (23-72)||(6155693-6155742)
chr3 (8-72)||(16059267-16059331)
chr3 (1-64)||(17259196-17259259)
chr3 (1-44)||(19569338-19569381)
chr3 (17-72)||(24545678-24545733)
chr3 (1-46)||(17259254-17259299)
chr3 (24-72)||(17044100-17044148)
chr3 (20-64)||(37427610-37427654)
chr3 (20-72)||(16728335-16728388)
chr3 (24-64)||(5214922-5214962)
chr3 (24-64)||(14507908-14507948)
chr3 (8-72)||(16049884-16049948)
chr3 (2-46)||(17207127-17207171)
chr3 (24-64)||(17519913-17519953)
chr3 (24-64)||(17534775-17534815)
chr3 (20-72)||(20417126-20417177)
chr3 (24-64)||(22307591-22307631)
chr3 (24-64)||(40807000-40807040)
chr3 (24-64)||(40811815-40811855)
chr3 (25-64)||(15206844-15206883)
chr3 (11-46)||(16059229-16059264)
chr3 (24-63)||(17538111-17538150)
chr3 (20-64)||(14642511-14642556)
chr3 (9-46)||(16044368-16044405)
chr3 (20-72)||(45531569-45531622)
chr3 (24-72)||(1208932-1208980)
chr3 (20-64)||(2842422-2842466)
chr3 (28-64)||(5206611-5206647)
chr3 (14-46)||(5214846-5214878)
chr3 (24-72)||(9512011-9512058)
chr3 (24-72)||(9519986-9520033)
chr3 (14-46)||(14507832-14507864)
chr3 (24-60)||(15932466-15932502)
chr3 (14-46)||(15932546-15932578)
chr3 (14-46)||(17548607-17548639)
chr3 (24-64)||(30175522-30175562)
chr3 (20-64)||(35065550-35065594)
chr3 (14-46)||(40806924-40806956)
chr3 (14-46)||(41173411-41173443)
chr3 (24-64)||(50756327-50756367)
chr3 (25-64)||(9577534-9577573)
chr3 (14-53)||(9707921-9707960)
chr3 (24-59)||(13026649-13026684)
chr3 (24-59)||(13031738-13031773)
chr3 (25-64)||(15245926-15245965)
chr3 (24-59)||(17548528-17548563)
chr3 (25-64)||(23318887-23318926)
chr3 (1-44)||(24545591-24545634)
chr3 (138-172)||(11192103-11192137)
chr3 (138-172)||(11562591-11562625)
chr3 (14-48)||(13152111-13152145)
chr3 (14-48)||(13154576-13154610)
chr3 (14-48)||(15977320-15977354)
chr3 (14-44)||(17538058-17538088)
chr3 (14-48)||(21618299-21618333)
chr3 (14-44)||(22307654-22307684)
chr3 (14-48)||(34159134-34159168)
chr3 (14-48)||(36166405-36166439)
chr3 (14-48)||(45607227-45607261)
chr3 (139-172)||(6155809-6155842)
chr3 (20-64)||(12512780-12512825)
chr3 (20-64)||(14153425-14153470)
chr3 (9-46)||(16049844-16049881)
chr3 (20-64)||(17693127-17693172)
chr3 (20-64)||(46751955-46752000)
chr3 (14-46)||(5206695-5206727)
chr3 (14-46)||(8898903-8898935)
chr3 (2-46)||(11191945-11191989)
chr3 (20-64)||(11886634-11886678)
chr3 (14-46)||(13031817-13031849)
chr3 (14-46)||(15448039-15448071)
chr3 (14-46)||(17519997-17520029)
chr3 (14-46)||(17520062-17520094)
chr3 (14-46)||(17534859-17534891)
chr3 (25-61)||(18700671-18700707)
chr3 (24-64)||(19884493-19884533)
chr3 (14-46)||(24153443-24153475)
chr3 (14-46)||(29172862-29172894)
chr3 (14-46)||(29172905-29172937)
chr3 (14-46)||(30175606-30175638)
chr3 (14-46)||(31224996-31225028)
chr3 (14-46)||(31415187-31415219)
chr3 (14-46)||(40811739-40811771)
chr3 (14-46)||(41123699-41123731)
chr3 (14-46)||(43890076-43890108)
chr3 (20-64)||(44269567-44269611)
chr3 (24-64)||(45804366-45804406)
[»] chr2 (67 HSPs)
chr2 (1-64)||(3538793-3538856)
chr2 (1-72)||(1384730-1384801)
chr2 (1-72)||(18391263-18391334)
chr2 (7-64)||(25140931-25140988)
chr2 (8-72)||(27851614-27851678)
chr2 (8-64)||(27860329-27860385)
chr2 (19-64)||(44071538-44071583)
chr2 (24-72)||(21336658-21336706)
chr2 (20-64)||(24835040-24835084)
chr2 (1-46)||(3538753-3538798)
chr2 (20-72)||(19357992-19358045)
chr2 (14-59)||(24865733-24865778)
chr2 (24-64)||(6576217-6576257)
chr2 (24-64)||(21316764-21316804)
chr2 (24-64)||(22689684-22689724)
chr2 (24-64)||(22694280-22694320)
chr2 (20-64)||(24815639-24815683)
chr2 (18-64)||(5985135-5985182)
chr2 (1-44)||(27851567-27851610)
chr2 (25-64)||(34136849-34136888)
chr2 (25-64)||(43947538-43947577)
chr2 (20-64)||(18389258-18389303)
chr2 (1-46)||(18391329-18391374)
chr2 (24-61)||(19202150-19202187)
chr2 (28-64)||(5032332-5032368)
chr2 (14-46)||(9974853-9974885)
chr2 (14-46)||(19202231-19202263)
chr2 (14-46)||(19202296-19202328)
chr2 (14-46)||(21316805-21316837)
chr2 (14-46)||(22500810-22500842)
chr2 (14-46)||(22508744-22508776)
chr2 (14-46)||(24435981-24436013)
chr2 (24-64)||(24781848-24781888)
chr2 (14-46)||(24781955-24781987)
chr2 (24-64)||(24883466-24883506)
chr2 (140-172)||(25141064-25141096)
chr2 (20-64)||(36839212-36839256)
chr2 (25-64)||(9974930-9974969)
chr2 (22-72)||(14693273-14693324)
chr2 (25-64)||(18547119-18547158)
chr2 (24-59)||(22500843-22500878)
chr2 (24-59)||(22508777-22508812)
chr2 (1-44)||(27860282-27860325)
chr2 (14-44)||(356966-356996)
chr2 (14-44)||(5032458-5032488)
chr2 (14-48)||(18808751-18808785)
chr2 (14-48)||(24529850-24529884)
chr2 (14-44)||(24865855-24865885)
chr2 (14-48)||(32039818-32039852)
chr2 (24-57)||(23969606-23969639)
chr2 (20-64)||(25045050-25045095)
chr2 (1-49)||(25085404-25085453)
chr2 (15-48)||(28576908-28576941)
chr2 (24-56)||(357019-357051)
chr2 (14-46)||(6478342-6478374)
chr2 (14-46)||(21155381-21155413)
chr2 (14-46)||(21336795-21336827)
chr2 (14-46)||(21367781-21367813)
chr2 (29-69)||(22259019-22259059)
chr2 (14-46)||(23712334-23712366)
chr2 (14-46)||(23969640-23969672)
chr2 (24-64)||(24436057-24436097)
chr2 (14-46)||(24643272-24643304)
chr2 (14-46)||(24883390-24883422)
chr2 (8-44)||(27851534-27851570)
chr2 (8-44)||(27860249-27860285)
chr2 (20-64)||(28653472-28653515)
[»] scaffold0505 (2 HSPs)
scaffold0505 (1-71)||(1695-1765)
scaffold0505 (1-64)||(3706-3769)
[»] chr7 (97 HSPs)
chr7 (7-72)||(48213880-48213945)
chr7 (1-64)||(19558269-19558332)
chr7 (7-72)||(9744087-9744153)
chr7 (8-72)||(11053666-11053730)
chr7 (1-72)||(48809484-48809555)
chr7 (8-72)||(13133491-13133555)
chr7 (8-72)||(15281297-15281361)
chr7 (1-64)||(16077394-16077457)
chr7 (14-64)||(12371272-12371322)
chr7 (18-72)||(15576920-15576974)
chr7 (7-72)||(4070760-4070825)
chr7 (1-46)||(15139079-15139124)
chr7 (2-46)||(22001263-22001307)
chr7 (1-44)||(33000949-33000992)
chr7 (14-64)||(14183634-14183684)
chr7 (1-72)||(14220000-14220070)
chr7 (24-72)||(8136040-8136088)
chr7 (1-44)||(11053618-11053661)
chr7 (18-72)||(33001004-33001059)
chr7 (14-64)||(12128172-12128222)
chr7 (1-46)||(4070713-4070758)
chr7 (1-46)||(19558327-19558372)
chr7 (24-64)||(8852173-8852213)
chr7 (24-64)||(13150544-13150584)
chr7 (24-64)||(15096645-15096685)
chr7 (20-64)||(19282130-19282174)
chr7 (24-64)||(20619289-20619329)
chr7 (24-72)||(24270771-24270819)
chr7 (24-72)||(25941393-25941441)
chr7 (24-64)||(46387070-46387110)
chr7 (28-64)||(47094138-47094174)
chr7 (25-64)||(130990-131029)
chr7 (1-44)||(13133559-13133602)
chr7 (29-72)||(14153880-14153923)
chr7 (25-64)||(38519281-38519320)
chr7 (26-64)||(18075536-18075574)
chr7 (20-64)||(10660216-10660261)
chr7 (20-64)||(13699715-13699760)
chr7 (1-46)||(15139039-15139084)
chr7 (20-64)||(36705631-36705676)
chr7 (1-46)||(48809550-48809595)
chr7 (24-64)||(59400-59440)
chr7 (14-46)||(8852257-8852289)
chr7 (14-46)||(11066396-11066428)
chr7 (28-72)||(15139151-15139195)
chr7 (14-46)||(18075577-18075609)
chr7 (28-64)||(18875880-18875916)
chr7 (20-64)||(20585394-20585438)
chr7 (14-46)||(20619213-20619245)
chr7 (14-46)||(48811829-48811861)
chr7 (29-72)||(4691760-4691803)
chr7 (29-64)||(9033521-9033556)
chr7 (21-64)||(12466230-12466273)
chr7 (29-72)||(13745965-13746008)
chr7 (1-44)||(15281249-15281292)
chr7 (25-64)||(16996131-16996170)
chr7 (14-49)||(17062152-17062187)
chr7 (24-59)||(36686213-36686248)
chr7 (24-59)||(43747457-43747492)
chr7 (1-46)||(8136111-8136154)
chr7 (1-46)||(8136149-8136195)
chr7 (14-48)||(11972304-11972338)
chr7 (14-44)||(12128234-12128264)
chr7 (14-44)||(12371230-12371260)
chr7 (14-44)||(13150672-13150702)
chr7 (14-48)||(16232328-16232362)
chr7 (20-61)||(17071252-17071294)
chr7 (9-39)||(17130767-17130797)
chr7 (14-44)||(18875943-18875973)
chr7 (14-48)||(21189915-21189949)
chr7 (14-48)||(29329197-29329231)
chr7 (14-48)||(32125299-32125333)
chr7 (12-46)||(38479948-38479982)
chr7 (14-48)||(41522725-41522759)
chr7 (14-48)||(41525187-41525221)
chr7 (26-64)||(44373990-44374028)
chr7 (26-64)||(44382855-44382893)
chr7 (1-43)||(48213950-48213992)
chr7 (14-48)||(48273199-48273233)
chr7 (1-49)||(15120338-15120387)
chr7 (24-64)||(22001199-22001240)
chr7 (20-64)||(37785320-37785365)
chr7 (20-64)||(43277780-43277825)
chr7 (24-64)||(11066472-11066512)
chr7 (14-46)||(13150628-13150660)
chr7 (20-64)||(14161840-14161884)
chr7 (1-44)||(14220067-14220108)
chr7 (14-46)||(20110407-20110439)
chr7 (14-46)||(30821909-30821941)
chr7 (14-46)||(32300929-32300961)
chr7 (14-46)||(32434681-32434713)
chr7 (14-46)||(36686292-36686324)
chr7 (14-46)||(38227312-38227344)
chr7 (14-46)||(38480015-38480047)
chr7 (28-64)||(42461861-42461897)
chr7 (14-46)||(44116360-44116392)
chr7 (14-46)||(48811765-48811797)
[»] scaffold0108 (4 HSPs)
scaffold0108 (1-72)||(7871-7941)
scaffold0108 (2-46)||(7936-7980)
scaffold0108 (18-64)||(3159-3205)
scaffold0108 (21-64)||(5462-5506)
[»] scaffold0056 (3 HSPs)
scaffold0056 (1-72)||(66049-66120)
scaffold0056 (29-71)||(15691-15733)
scaffold0056 (1-46)||(66009-66054)
[»] chr6 (58 HSPs)
chr6 (1-64)||(23500675-23500738)
chr6 (1-72)||(31735867-31735938)
chr6 (7-64)||(22556224-22556281)
chr6 (1-72)||(23492254-23492325)
chr6 (1-72)||(23497852-23497923)
chr6 (7-72)||(19957912-19957977)
chr6 (1-72)||(28947476-28947548)
chr6 (18-72)||(15895830-15895884)
chr6 (1-46)||(19957979-19958024)
chr6 (1-46)||(23500635-23500680)
chr6 (1-46)||(31735933-31735978)
chr6 (1-64)||(17105581-17105641)
chr6 (20-64)||(17229828-17229872)
chr6 (20-64)||(18260177-18260220)
chr6 (24-64)||(18708504-18708544)
chr6 (24-64)||(20136577-20136617)
chr6 (24-72)||(21680800-21680848)
chr6 (24-64)||(22196252-22196292)
chr6 (21-61)||(23528278-23528318)
chr6 (24-72)||(25920702-25920750)
chr6 (20-64)||(27126447-27126491)
chr6 (29-72)||(18458105-18458148)
chr6 (25-64)||(19656308-19656347)
chr6 (25-64)||(27573272-27573311)
chr6 (18-64)||(16245237-16245283)
chr6 (18-64)||(22212470-22212516)
chr6 (18-64)||(22376858-22376903)
chr6 (24-72)||(6083709-6083758)
chr6 (9-46)||(16133728-16133765)
chr6 (20-64)||(18203983-18204027)
chr6 (14-46)||(19444338-19444370)
chr6 (28-64)||(23017098-23017134)
chr6 (24-64)||(27323626-27323666)
chr6 (24-59)||(16133649-16133684)
chr6 (14-49)||(16448762-16448797)
chr6 (25-64)||(17743109-17743148)
chr6 (25-64)||(19362335-19362374)
chr6 (24-59)||(19444259-19444294)
chr6 (14-48)||(2291500-2291534)
chr6 (14-48)||(8054837-8054871)
chr6 (14-48)||(18334912-18334946)
chr6 (14-48)||(19004854-19004888)
chr6 (18-64)||(23083243-23083288)
chr6 (14-48)||(24422355-24422389)
chr6 (14-48)||(33864086-33864120)
chr6 (20-61)||(18177847-18177888)
chr6 (20-64)||(20411742-20411787)
chr6 (14-47)||(25688391-25688424)
chr6 (14-47)||(25714309-25714342)
chr6 (14-46)||(1595358-1595390)
chr6 (14-46)||(20557171-20557203)
chr6 (14-46)||(20734488-20734520)
chr6 (14-46)||(23017182-23017214)
chr6 (14-46)||(23017247-23017279)
chr6 (1-64)||(23538555-23538615)
chr6 (14-46)||(27326811-27326843)
chr6 (14-46)||(27387551-27387583)
chr6 (24-72)||(30674357-30674405)
[»] scaffold0213 (1 HSPs)
scaffold0213 (7-72)||(18115-18180)
[»] scaffold0054 (5 HSPs)
scaffold0054 (7-72)||(65938-66003)
scaffold0054 (1-44)||(66047-66090)
scaffold0054 (20-64)||(76002-76046)
scaffold0054 (1-44)||(66087-66130)
scaffold0054 (1-46)||(66005-66050)
[»] scaffold0004 (2 HSPs)
scaffold0004 (3-64)||(109202-109263)
scaffold0004 (24-72)||(74587-74635)
[»] chr1 (61 HSPs)
chr1 (7-72)||(24720758-24720823)
chr1 (1-64)||(21240194-21240257)
chr1 (7-64)||(44891616-44891673)
chr1 (1-64)||(13301816-13301879)
chr1 (6-72)||(14793387-14793454)
chr1 (15-72)||(17904013-17904071)
chr1 (1-46)||(17904072-17904117)
chr1 (24-72)||(18120609-18120657)
chr1 (20-64)||(51476023-51476067)
chr1 (7-46)||(24720825-24720864)
chr1 (1-44)||(42696710-42696753)
chr1 (1-44)||(45754446-45754489)
chr1 (18-72)||(45754501-45754555)
chr1 (1-46)||(44891569-44891614)
chr1 (20-64)||(4596815-4596859)
chr1 (20-64)||(20241867-20241911)
chr1 (24-64)||(41227702-41227742)
chr1 (24-72)||(51323367-51323415)
chr1 (25-64)||(23967625-23967664)
chr1 (18-64)||(42696765-42696811)
chr1 (1-46)||(13301776-13301821)
chr1 (23-72)||(21244823-21244872)
chr1 (20-64)||(22349643-22349688)
chr1 (20-64)||(38057612-38057657)
chr1 (24-72)||(7321895-7321943)
chr1 (1-46)||(18120539-18120586)
chr1 (28-64)||(20587738-20587774)
chr1 (28-64)||(20592276-20592312)
chr1 (24-64)||(28477683-28477723)
chr1 (14-46)||(29297946-29297978)
chr1 (24-64)||(35088521-35088561)
chr1 (20-64)||(42912088-42912132)
chr1 (24-72)||(45496035-45496083)
chr1 (24-59)||(13528771-13528806)
chr1 (26-61)||(20634585-20634620)
chr1 (14-49)||(21711598-21711633)
chr1 (25-64)||(22124194-22124233)
chr1 (18-64)||(24726369-24726416)
chr1 (14-49)||(40389046-40389081)
chr1 (25-64)||(48520243-48520282)
chr1 (1-46)||(7321966-7322012)
chr1 (14-48)||(23594055-23594089)
chr1 (14-44)||(35088403-35088433)
chr1 (14-48)||(40389002-40389036)
chr1 (25-59)||(51274551-51274585)
chr1 (20-64)||(8276952-8276997)
chr1 (1-46)||(24720892-24720937)
chr1 (14-46)||(431567-431599)
chr1 (14-46)||(14238594-14238626)
chr1 (20-64)||(16059284-16059328)
chr1 (28-64)||(16381096-16381132)
chr1 (20-64)||(19675789-19675833)
chr1 (14-46)||(20587658-20587690)
chr1 (14-46)||(20592196-20592228)
chr1 (14-46)||(20634666-20634698)
chr1 (14-46)||(22123346-22123378)
chr1 (14-46)||(22123389-22123421)
chr1 (14-46)||(27161741-27161773)
chr1 (14-46)||(35088445-35088477)
chr1 (24-52)||(39060180-39060208)
chr1 (28-64)||(48300871-48300907)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-72)||(20973-21045)
[»] scaffold1223 (1 HSPs)
scaffold1223 (1-72)||(135-206)
[»] scaffold0063 (2 HSPs)
scaffold0063 (7-72)||(61780-61845)
scaffold0063 (1-46)||(61733-61778)
[»] scaffold1695 (1 HSPs)
scaffold1695 (1-64)||(407-470)
[»] scaffold1186 (1 HSPs)
scaffold1186 (1-64)||(596-659)
[»] scaffold0645 (2 HSPs)
scaffold0645 (1-64)||(142-205)
scaffold0645 (138-172)||(70-104)
[»] scaffold0445 (2 HSPs)
scaffold0445 (1-64)||(2894-2957)
scaffold0445 (1-46)||(2952-2997)
[»] scaffold0231 (2 HSPs)
scaffold0231 (1-64)||(18754-18817)
scaffold0231 (1-46)||(18854-18899)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-64)||(34313-34376)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-64)||(187609-187672)
[»] scaffold0037 (2 HSPs)
scaffold0037 (1-64)||(113616-113679)
scaffold0037 (2-45)||(113675-113718)
[»] scaffold0628 (6 HSPs)
scaffold0628 (7-72)||(4510-4576)
scaffold0628 (7-72)||(9070-9136)
scaffold0628 (1-46)||(4619-4664)
scaffold0628 (1-46)||(9179-9224)
scaffold0628 (7-46)||(4578-4617)
scaffold0628 (7-46)||(9138-9177)
[»] scaffold0151 (1 HSPs)
scaffold0151 (18-72)||(24209-24263)
[»] scaffold0011 (4 HSPs)
scaffold0011 (7-72)||(39929-39995)
scaffold0011 (16-64)||(38325-38372)
scaffold0011 (1-64)||(125655-125715)
scaffold0011 (8-46)||(39889-39927)
[»] scaffold0121 (2 HSPs)
scaffold0121 (7-72)||(19176-19240)
scaffold0121 (1-46)||(19129-19174)
[»] scaffold0589 (1 HSPs)
scaffold0589 (1-72)||(3296-3367)
[»] scaffold0859 (2 HSPs)
scaffold0859 (26-72)||(3793-3839)
scaffold0859 (1-46)||(3723-3769)
[»] scaffold0379 (4 HSPs)
scaffold0379 (18-64)||(4749-4795)
scaffold0379 (20-62)||(14797-14839)
scaffold0379 (24-70)||(9749-9795)
scaffold0379 (24-70)||(16941-16987)
[»] scaffold0010 (3 HSPs)
scaffold0010 (11-72)||(127370-127431)
scaffold0010 (25-64)||(556-595)
scaffold0010 (1-44)||(127439-127482)
[»] scaffold0261 (2 HSPs)
scaffold0261 (24-72)||(7434-7482)
scaffold0261 (1-46)||(7505-7552)
[»] scaffold0203 (1 HSPs)
scaffold0203 (20-64)||(19111-19155)
[»] scaffold0017 (1 HSPs)
scaffold0017 (24-72)||(25655-25703)
[»] scaffold1256 (1 HSPs)
scaffold1256 (21-72)||(340-391)
[»] scaffold0790 (1 HSPs)
scaffold0790 (20-63)||(5939-5982)
[»] scaffold0338 (2 HSPs)
scaffold0338 (21-72)||(11761-11812)
scaffold0338 (1-44)||(11827-11870)
[»] scaffold0083 (6 HSPs)
scaffold0083 (18-72)||(11660-11715)
scaffold0083 (18-64)||(897-944)
scaffold0083 (1-44)||(956-999)
scaffold0083 (18-64)||(6201-6248)
scaffold0083 (1-44)||(6260-6303)
scaffold0083 (2-44)||(11726-11768)
[»] scaffold0042 (3 HSPs)
scaffold0042 (18-64)||(28323-28370)
scaffold0042 (1-64)||(47523-47587)
scaffold0042 (9-43)||(28276-28310)
[»] scaffold0008 (2 HSPs)
scaffold0008 (1-64)||(136577-136640)
scaffold0008 (6-46)||(136677-136717)
[»] scaffold0439 (2 HSPs)
scaffold0439 (18-72)||(3502-3556)
scaffold0439 (18-64)||(11213-11259)
[»] scaffold0012 (1 HSPs)
scaffold0012 (18-72)||(221371-221425)
[»] scaffold0241 (2 HSPs)
scaffold0241 (1-72)||(1434-1504)
scaffold0241 (1-64)||(4601-4663)
[»] scaffold0048 (2 HSPs)
scaffold0048 (1-49)||(56034-56083)
scaffold0048 (29-72)||(56106-56149)
[»] scaffold0028 (1 HSPs)
scaffold0028 (19-72)||(3976-4029)
[»] scaffold0520 (1 HSPs)
scaffold0520 (24-72)||(373-421)
[»] scaffold0371 (5 HSPs)
scaffold0371 (24-72)||(16656-16704)
scaffold0371 (14-46)||(2811-2843)
scaffold0371 (1-46)||(16587-16633)
scaffold0371 (1-49)||(11313-11362)
scaffold0371 (29-72)||(11246-11290)
[»] scaffold0301 (1 HSPs)
scaffold0301 (20-64)||(10875-10919)
[»] scaffold0112 (1 HSPs)
scaffold0112 (24-72)||(1891-1939)
[»] scaffold0111 (7 HSPs)
scaffold0111 (20-64)||(19771-19815)
scaffold0111 (14-46)||(7242-7274)
scaffold0111 (24-64)||(7340-7380)
scaffold0111 (14-46)||(14361-14393)
scaffold0111 (14-46)||(14426-14458)
scaffold0111 (24-64)||(14459-14499)
scaffold0111 (16-46)||(7309-7339)
[»] scaffold0040 (3 HSPs)
scaffold0040 (18-62)||(22140-22184)
scaffold0040 (20-64)||(102066-102110)
scaffold0040 (18-65)||(11040-11087)
[»] scaffold0036 (3 HSPs)
scaffold0036 (24-64)||(78318-78358)
scaffold0036 (14-46)||(78402-78434)
scaffold0036 (14-44)||(78446-78476)
[»] scaffold0018 (1 HSPs)
scaffold0018 (20-64)||(7613-7657)
[»] scaffold0914 (1 HSPs)
scaffold0914 (25-64)||(1609-1648)
[»] scaffold0207 (1 HSPs)
scaffold0207 (25-64)||(15462-15501)
[»] scaffold0123 (1 HSPs)
scaffold0123 (29-72)||(15985-16028)
[»] scaffold0075 (2 HSPs)
scaffold0075 (9-44)||(60218-60253)
scaffold0075 (18-64)||(60303-60349)
[»] scaffold0046 (2 HSPs)
scaffold0046 (25-64)||(17090-17129)
scaffold0046 (25-64)||(26202-26241)
[»] scaffold0003 (1 HSPs)
scaffold0003 (29-64)||(95340-95375)
[»] scaffold0716 (1 HSPs)
scaffold0716 (18-72)||(942-996)
[»] scaffold0107 (2 HSPs)
scaffold0107 (26-64)||(36090-36128)
scaffold0107 (28-64)||(10599-10635)
[»] scaffold0074 (2 HSPs)
scaffold0074 (18-60)||(8063-8105)
scaffold0074 (20-64)||(610-654)
[»] scaffold1539 (2 HSPs)
scaffold1539 (20-64)||(552-597)
scaffold1539 (25-64)||(847-886)
[»] scaffold0737 (2 HSPs)
scaffold0737 (24-61)||(6638-6675)
scaffold0737 (14-44)||(6740-6770)
[»] scaffold0098 (1 HSPs)
scaffold0098 (20-64)||(39161-39206)
[»] scaffold0077 (2 HSPs)
scaffold0077 (20-64)||(14121-14166)
scaffold0077 (14-46)||(33388-33420)
[»] scaffold0065 (1 HSPs)
scaffold0065 (20-64)||(54916-54961)
[»] scaffold1633 (3 HSPs)
scaffold1633 (14-46)||(246-278)
scaffold1633 (24-59)||(322-357)
scaffold1633 (14-46)||(182-214)
[»] scaffold0507 (1 HSPs)
scaffold0507 (24-64)||(2844-2884)
[»] scaffold0500 (1 HSPs)
scaffold0500 (20-64)||(7456-7500)
[»] scaffold0375 (2 HSPs)
scaffold0375 (28-64)||(9310-9346)
scaffold0375 (14-46)||(9394-9426)
[»] scaffold0369 (1 HSPs)
scaffold0369 (24-72)||(16926-16974)
[»] scaffold0188 (1 HSPs)
scaffold0188 (14-46)||(693-725)
[»] scaffold0064 (2 HSPs)
scaffold0064 (14-46)||(57728-57760)
scaffold0064 (24-64)||(57804-57844)
[»] scaffold0047 (2 HSPs)
scaffold0047 (14-46)||(78014-78046)
scaffold0047 (24-64)||(78090-78130)
[»] scaffold0032 (1 HSPs)
scaffold0032 (28-64)||(63137-63173)
[»] scaffold0001 (4 HSPs)
scaffold0001 (28-64)||(497337-497373)
scaffold0001 (24-61)||(76755-76792)
scaffold0001 (18-63)||(446388-446432)
scaffold0001 (14-46)||(76679-76711)
[»] scaffold0282 (1 HSPs)
scaffold0282 (29-64)||(18340-18375)
[»] scaffold0220 (2 HSPs)
scaffold0220 (1-44)||(17400-17443)
scaffold0220 (21-64)||(12993-13037)
[»] scaffold0101 (1 HSPs)
scaffold0101 (14-49)||(1516-1551)
[»] scaffold0072 (1 HSPs)
scaffold0072 (25-64)||(57726-57765)
[»] scaffold0020 (1 HSPs)
scaffold0020 (25-64)||(142490-142529)
[»] scaffold1351 (1 HSPs)
scaffold1351 (14-44)||(1367-1397)
[»] scaffold0509 (2 HSPs)
scaffold0509 (30-64)||(9766-9800)
scaffold0509 (14-46)||(9850-9882)
[»] scaffold0452 (1 HSPs)
scaffold0452 (26-64)||(13717-13755)
[»] scaffold0347 (1 HSPs)
scaffold0347 (25-63)||(8798-8836)
[»] scaffold0293 (1 HSPs)
scaffold0293 (26-64)||(17413-17451)
[»] scaffold0254 (1 HSPs)
scaffold0254 (14-48)||(20555-20589)
[»] scaffold0142 (2 HSPs)
scaffold0142 (14-48)||(16629-16663)
scaffold0142 (14-48)||(16673-16707)
[»] scaffold0106 (2 HSPs)
scaffold0106 (26-60)||(19824-19858)
scaffold0106 (14-46)||(15473-15505)
[»] scaffold0090 (1 HSPs)
scaffold0090 (34-64)||(17332-17362)
[»] scaffold0061 (1 HSPs)
scaffold0061 (14-44)||(19513-19543)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-46)||(65103-65149)
[»] scaffold0026 (1 HSPs)
scaffold0026 (14-44)||(145738-145768)
[»] scaffold0023 (1 HSPs)
scaffold0023 (14-48)||(94219-94253)
[»] scaffold0022 (1 HSPs)
scaffold0022 (14-48)||(116274-116308)
[»] scaffold0013 (1 HSPs)
scaffold0013 (14-48)||(30146-30180)
[»] scaffold0328 (1 HSPs)
scaffold0328 (20-64)||(19604-19649)
[»] scaffold0218 (1 HSPs)
scaffold0218 (18-62)||(9044-9089)
[»] scaffold0170 (1 HSPs)
scaffold0170 (20-72)||(2570-2623)
[»] scaffold0117 (2 HSPs)
scaffold0117 (26-59)||(41202-41235)
scaffold0117 (14-46)||(41281-41313)
[»] scaffold0039 (1 HSPs)
scaffold0039 (20-64)||(10860-10905)
[»] scaffold0002 (1 HSPs)
scaffold0002 (20-64)||(397541-397586)
[»] scaffold1662 (1 HSPs)
scaffold1662 (20-64)||(391-435)
[»] scaffold0697 (1 HSPs)
scaffold0697 (14-46)||(6411-6443)
[»] scaffold0546 (1 HSPs)
scaffold0546 (14-46)||(10810-10842)
[»] scaffold0529 (1 HSPs)
scaffold0529 (29-64)||(7406-7442)
[»] scaffold0401 (1 HSPs)
scaffold0401 (2-49)||(7878-7926)
[»] scaffold0359 (1 HSPs)
scaffold0359 (20-64)||(15361-15405)
[»] scaffold0331 (1 HSPs)
scaffold0331 (20-64)||(13079-13122)
[»] scaffold0230 (1 HSPs)
scaffold0230 (12-48)||(13753-13789)
[»] scaffold0145 (1 HSPs)
scaffold0145 (14-46)||(9600-9632)
[»] scaffold0134 (1 HSPs)
scaffold0134 (24-64)||(10234-10274)
[»] scaffold0109 (1 HSPs)
scaffold0109 (14-46)||(959-991)
[»] scaffold0100 (1 HSPs)
scaffold0100 (28-72)||(27563-27607)
[»] scaffold0080 (2 HSPs)
scaffold0080 (24-64)||(59561-59601)
scaffold0080 (14-46)||(59645-59677)
[»] scaffold0071 (1 HSPs)
scaffold0071 (14-46)||(14118-14150)
[»] scaffold0059 (1 HSPs)
scaffold0059 (28-64)||(49083-49119)


Alignment Details
Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 83)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 45471492 - 45471421
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  45471492 caacttatagagcaaataggctcacagggcatcaagccctcaacttaaatgagtatgcatggactcagcaac 45471421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 23888761 - 23888824
Alignment:
Q  9 agagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23888761 agagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggactcagcaac 23888824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 20025316 - 20025245
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  20025316 caacatatagagcaaataggcgcacagggcatcaaaccctcaactttaatgagtatgcatggactcagcaac 20025245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 36728348 - 36728277
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||| |||||||    
T  36728348 caacttatagagcaaataggctcacagggcatgaatccctcaactttaatgagtatgcatcgactcagcaac 36728277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 22473578 - 22473635
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22473578 atagagcaaataggctcacagggcatcaaaccctcaactttaatgagtatgcatggac 22473635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17907993 - 17907922
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  17907993 caacttaaaaagcaaataggctcacagggcatcaagctctcaactttaatgagcatgcatggactcagcaac 17907922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 31723823 - 31723752
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||    
T  31723823 caacatatagaacaaataggctcacaggacatcaaaccctcaactttaatgagtatgcatggactcagcaac 31723752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 36406033 - 36405970
Alignment:
Q  9 agagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  36406033 agagcaaataggctcacagggcatcaagcccccaactttaattagtatgcatggactcagcaac 36405970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 36733641 - 36733576
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||| |||||||    
T  36733641 atagagcaaataggcttacagaacatcaagccctcaactttaatgagtatgcatggactcagcaac 36733576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 18815984 - 18815920
Alignment:
Q  9 agagcaaataggctcacagggcatcaagccctcaacttta-atgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||    
T  18815984 agagcaaataggctcacagggcatcaagccctcaactttagatgagtatgcatgaactcagcaac 18815920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 18819906 - 18819848
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaacttta-atgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  18819906 atagagcaaataggctcacagggcatcaaaccctcaactttagatgagtatgcatggac 18819848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 17217622 - 17217678
Alignment:
Q  8 tagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  17217622 tagagtaaataggctcacagggcatcaagccctcaacttatatgagtatgcatggac 17217678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38988378 - 38988442
Alignment:
Q  1 caacttatagagc-aaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  38988378 caacttatagagcgaaaaaggctcacaaggcatcaaaccctcaactttaatgagtatgcatggac 38988442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39019475 - 39019539
Alignment:
Q  1 caacttatagagc-aaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  39019475 caacttatagagcgaaaaaggctcacaaggcatcaaaccctcaactttaatgagtatgcatggac 39019539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 4381796 - 4381730
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaacttt-aatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||| ||||||||||||| |||||| |||||||||| |||||| |||||||    
T  4381796 atagagcaaataggctcacaaggcatcaagcccttaactttaaatgagtatggatggactcagcaac 4381730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 6102765 - 6102720
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  6102765 aaataggctcacagggcatcaagccctcaacttaaatgagtatgca 6102720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45471532 - 45471487
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  45471532 caacttatagagcgaataggctcacagggcatcaagccctcaactt 45471487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 9220 - 9260
Alignment:
Q  19 ggctcacagggcatcaagccctcaactttaatgagtatgca 59  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9220 ggctcacagggcatcaagccctcaactttaatgagtatgca 9260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 21513354 - 21513402
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  21513354 acagggcatcaagccctcaactttaatgagtatgcaaggactcagcaac 21513402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 22318926 - 22318886
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22318926 acagggcatcaagccctcaactttaatgagtatgcatggac 22318886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 22584740 - 22584688
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||| |||||||    
T  22584740 gctcatagggcatcaagccctcaacttaaatgagtatgcatggactcagcaac 22584688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 23947247 - 23947299
Alignment:
Q  21 ctcacagggcatcaagccctcaacttt-aatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  23947247 ctcacagggcatcaagccctcaactttaaatgagtatgcatggactcagcaac 23947299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17217574 - 17217617
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  17217574 caacttaaagagcaaataggctcacagggcatcaagccctcaac 17217617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 22473537 - 22473576
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22473537 atagagcaaataggctcacagggcatcaagccctcaactt 22473576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 19699110 - 19699156
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||    
T  19699110 aggctcacagggcatcaagccctcaacttatatgagtatgcatggac 19699156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 19929828 - 19929782
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||    
T  19929828 aggctcacagggcatcaagcccccaacttaaatgagtatgcatggac 19929782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 18820072 - 18820035
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18820072 atagagcaaataggctcacagggcatcaagccctcaac 18820035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36406123 - 36406078
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||    
T  36406123 caacgtatagagcaaataggctcacagggcatcaaaccctcaactt 36406078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 5760446 - 5760506
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||| |||||||  ||||| |||||||||||||||||||||| |||||||||||||||||    
T  5760446 caacttattgagcaaa--ggctc-cagggcatcaagccctcaacttaaatgagtatgcatggac 5760506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 17979500 - 17979460
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  17979500 acagggcatcaagccctcaactttaatgagtatgcaaggac 17979460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 19128014 - 19128054
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  19128014 acagggcatcaagccctcaacttaaatgagtatgcatggac 19128054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 4381837 - 4381798
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  4381837 atagagcatataggctcacagggcatcaagccctcaactt 4381798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 22244447 - 22244502
Alignment:
Q  18 aggctcacagggcatcaagccctcaacttt-aatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||||| |||||||    
T  22244447 aggctcacagggcatcaaaccctcaactttaaatgagtaagcatggactcagcaac 22244502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 22995751 - 22995790
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  22995751 cagggcatcaagcccccaactttaatgagtatgcatggac 22995790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 28397458 - 28397497
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  28397458 cagggcatcaagcccccaactttaatgagtatgcatggac 28397497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 37515435 - 37515474
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  37515435 cagggcatcaagcccccaactttaatgagtatgcatggac 37515474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 13665472 - 13665427
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  13665472 aggctcacagggcatcaagccctcaac-tcaatgagtatgcatggac 13665427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 13724747 - 13724702
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  13724747 aggctcacagggcatcaagccctcaac-tcaatgagtatgcatggac 13724702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 22253383 - 22253337
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||||    
T  22253383 aggctcccagggcatcaagcccccaacttaaatgagtatgcatggac 22253337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22318995 - 22318949
Alignment:
Q  1 caacttatagagca-aataggctcacagggcatcaagccctcaactt 46  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22318995 caacgtatagagcataataggctcacagggcatcaagccctcaactt 22318949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 22259369 - 22259316
Alignment:
Q  20 gctcacagggcatcaagccctcaacttt-aatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||  |||||||| ||||||||||||||||| |||||||    
T  22259369 gctcacagggcatcaagctttcaactttgaatgagtatgcatggactcagcaac 22259316  T

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Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 23418391 - 23418436
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  23418391 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 23418436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 25849445 - 25849400
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  25849445 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 25849400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 39695535 - 39695490
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  39695535 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 39695490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 39695620 - 39695575
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  39695620 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 39695575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 20084633 - 20084581
Alignment:
Q  21 ctcacagggcatcaagccctcaacttt-aatgagtatgcatggacccagcaac 72  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||| |||||||    
T  20084633 ctcacagagcatcaagccctcaactttaaatgaatatgcatggactcagcaac 20084581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 42818912 - 42818868
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||| |||||||| | |||||||||||||||||    
T  42818912 gctcacagggcatcaatccctcaacgtaaatgagtatgcatggac 42818868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 2419081 - 2419046
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgcatg 61  Q
    ||||||||||||||||||||| ||||||||||||||    
T  2419081 agggcatcaagccctcaacttgaatgagtatgcatg 2419046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 19699063 - 19699098
Alignment:
Q  9 agagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||||||||||||||||||||||| ||||||||    
T  19699063 agagcaaataggctcacagggcatcaaaccctcaac 19699098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 21580205 - 21580170
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  21580205 acagggcatcaagccctcaacttaaatgagtatgca 21580170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 23888721 - 23888756
Alignment:
Q  9 agagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||||||||||||||||||||||||||| ||||    
T  23888721 agagcaaataggctcacagggcatcaagcccccaac 23888756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 36406076 - 36406037
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  36406076 atagagcaaataggctcacaaggcatcaagccatcaactt 36406037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 1484210 - 1484244
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  1484210 aaataggctcccagggcatcaagccctcaacttta 1484244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 20179529 - 20179491
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  20179529 agggcatcaagccctcaacgtaaatgagtatgcatggac 20179491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 20403035 - 20403069
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  20403035 aaataggctcccagggcatcaagccctcaacttta 20403069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 22001562 - 22001596
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  22001562 aaataggctcccagggcatcaagccctcaacttta 22001596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 22381942 - 22381904
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  22381942 agggcatcaagccctcaacttaaatgagtatggatggac 22381904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 26225602 - 26225568
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  26225602 aaataggctcccagggcatcaagccctcaacttta 26225568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 172
Target Start/End: Complemental strand, 36728211 - 36728177
Alignment:
Q  138 agcgactttggaaataacttgcaacttaacgatat 172  Q
    ||||||||||| |||||||||||||||||||||||    
T  36728211 agcgactttggcaataacttgcaacttaacgatat 36728177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38988299 - 38988345
Alignment:
Q  1 caacttatagagc-aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||    
T  38988299 caacttatagagcgaaaaaggctcacagggcatcaagcccccaactt 38988345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39019396 - 39019442
Alignment:
Q  1 caacttatagagc-aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||    
T  39019396 caacttatagagcgaaaaaggctcacagggcatcaagcccccaactt 39019442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 39937056 - 39937018
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  39937056 agggcatcaagccctcaacttaaataagtatgcatggac 39937018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 42266596 - 42266554
Alignment:
Q  23 cacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  42266596 cacagggcatcaagccctcaacttcaaatgagtatgcatggac 42266554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 45291049 - 45291015
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  45291049 aaataggctcccagggcatcaagccctcaacttta 45291015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22473464 - 22473509
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| ||||||||||||||||||||| | |||||||||| ||||||    
T  22473464 caacgtatagagcaaataggctcacatgacatcaagcccccaactt 22473509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 23669470 - 23669515
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||    
T  23669470 gctcacagagcatcaagccctcaacttcaaatgagtatgcatggac 23669515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36728388 - 36728343
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| |||||||||||||| || |||||||||||||||| ||||||    
T  36728388 caacgtatagagcaaatagacttacagggcatcaagcccccaactt 36728343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36733688 - 36733643
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| ||||||| ||| |||||||||||||||||| ||||||||||    
T  36733688 caacgtatagagtaaaaaggctcacagggcatcaatccctcaactt 36733643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45471572 - 45471527
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| |||||||| |||||||||| |||||||||||||| ||||||    
T  45471572 caacgtatagagcgaataggctcagagggcatcaagcccccaactt 45471527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 15203584 - 15203552
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  15203584 aaataggctcccagggcatcaagccctcaactt 15203552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17979612 - 17979565
Alignment:
Q  1 caacttatagagcaaata--ggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||| | |  ||||||||||||||||||||||||||||    
T  17979612 caacttatagagcacaaaagggctcacagggcatcaagccctcaactt 17979565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 18760434 - 18760474
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||| ||||||||||||||||| |||||||||| ||||||    
T  18760434 acaggacatcaagccctcaacttaaatgagtatgtatggac 18760474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 18833256 - 18833288
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  18833256 aaataggctcccagggcatcaagccctcaactt 18833288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 20046505 - 20046473
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  20046505 aaataggctcccagggcatcaagccctcaactt 20046473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 21580304 - 21580272
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  21580304 aaataggctcacagggcatcaaaccctcaactt 21580272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 22344123 - 22344171
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| |||||||| || |||||||||||| ||||||||||| |||||||    
T  22344123 acagagcatcaagtccccaactttaatgattatgcatggactcagcaac 22344171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 22355783 - 22355831
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| |||||||| || |||||||||||| ||||||||||| |||||||    
T  22355783 acagagcatcaagtccccaactttaatgattatgcatggactcagcaac 22355831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 49
Target Start/End: Original strand, 23888693 - 23888721
Alignment:
Q  21 ctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||||||||||||||||||||||    
T  23888693 ctcacagggcatcaagccctcaactttaa 23888721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 24713149 - 24713181
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||| ||||||||||||||||    
T  24713149 aaataggctcacagggtatcaagccctcaactt 24713181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 24713225 - 24713265
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||| |||||||||||||||||| |||||||||||| ||||    
T  24713225 acagagcatcaagccctcaacttaaatgagtatgcagggac 24713265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 39937134 - 39937102
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  39937134 aaataggctcgcagggcatcaagccctcaactt 39937102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 41598040 - 41598072
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  41598040 aaataggctcccagggcatcaagccctcaactt 41598072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 41681750 - 41681718
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||| ||||||||    
T  41681750 aaataggctcacagggcatcaagctctcaactt 41681718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29914320 - 29914383
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29914320 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 29914383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 14026927 - 14026862
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14026927 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggactcagcaac 14026862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 20470149 - 20470078
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||| |||||||    
T  20470149 caacttatagagcaaatagactcatagggcatcaagccctcaacttaaatgagtatgcatggactcagcaac 20470078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8504767 - 8504695
Alignment:
Q  1 caacttatagagc-aaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8504767 caacgtatagagcgaaaaaggctcacagggcatcaagccctcaactttaatgagtatgcatggactcagcaac 8504695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6551572 - 6551527
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6551572 caacttatagagcaaataggctcacagggcatcaagccctcaactt 6551527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 25250908 - 25250852
Alignment:
Q  8 tagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  25250908 tagagtaaataggctcacagggcatcaagccctcaacttatatgagtatgcatggac 25250852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 25314693 - 25314637
Alignment:
Q  8 tagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  25314693 tagagtaaataggctcacagggcatcaagccctcaacttatatgagtatgcatggac 25314637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 6551525 - 6551467
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaacttta-atgagtatgcatggac 64  Q
    |||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  6551525 atagagcaaataggctcatagggcatcaagccctcaactttagataagtatgcatggac 6551467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20470189 - 20470144
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  20470189 caacttatagagcaaataggctcacagggtatcaagccctcaactt 20470144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 25742875 - 25742920
Alignment:
Q  19 ggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  25742875 ggctcacagggcatcaagccctcaacttgaatgagtatgcatggac 25742920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 20198754 - 20198706
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  20198754 acagggcatcaagccctcaactttaatgagtatgcaaggactcagcaac 20198706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 25250948 - 25250913
Alignment:
Q  9 agagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  25250948 agagcaaataggctcacagggcatcaagccctcaac 25250913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 25314733 - 25314698
Alignment:
Q  9 agagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  25314733 agagcaaataggctcacagggcatcaagccctcaac 25314698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25742819 - 25742862
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||| |||||||||||||||| |||||||||||||||||||    
T  25742819 caacttaaagagcaaataggctcatagggcatcaagccctcaac 25742862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 25743627 - 25743670
Alignment:
Q  21 ctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  25743627 ctcatagggcatcaagccctcaacttaaatgagtatgcatggac 25743670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 26749048 - 26749091
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||| ||||||||||| |||||||    
T  26749048 gcatcaagccctcaactttaatgattatgcatggactcagcaac 26749091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 26761487 - 26761522
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  26761487 gcatcaagccctcaactttaatgagtatgcatggac 26761522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12355138 - 12355183
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||    
T  12355138 caacgtatagagcaaataggctcacaaggcatcaaaccctcaactt 12355183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21619095 - 21619051
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||    
T  21619095 caacttatagagcaaataggctcacagggcat-aagtcctcaactt 21619051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29914280 - 29914325
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||    
T  29914280 caacatatagagaaaataggctcacagggcatcaagcccccaactt 29914325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 31454932 - 31454969
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatg 61  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  31454932 acagggcatcaagccctcaacttaaatgagtatgcatg 31454969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 31455545 - 31455582
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatg 61  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  31455545 acagggcatcaagccctcaacttaaatgagtatgcatg 31455582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 15796325 - 15796369
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||    
T  15796325 gctcacagggcatcaagccctaaacataaatgagtatgcatggac 15796369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 16605432 - 16605392
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  16605432 acagggcatcaagcccccaactttaatgattatgcatggac 16605392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 17874992 - 17875024
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  17874992 aaataggctcacagggcatcaagccctcaactt 17875024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 21558119 - 21558087
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  21558119 aaataggctcacagggcatcaagccctcaactt 21558087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 21619056 - 21618984
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaag---------ccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||| ||||| |||         ||||||||||||||||||||||||||||    
T  21619056 caacttatagagcaaataggctcacatggcataaagtccatcaaaccctcaactttaatgagtatgcatggac 21618984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26748974 - 26749025
Alignment:
Q  1 caacttatagagcaaata--ggctcacagggcatcaagccctcaactttaat 50  Q
    |||||||||||||| | |  ||||||||||||||||||||||||||||||||    
T  26748974 caacttatagagcacaaaagggctcacagggcatcaagccctcaactttaat 26749025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 1628515 - 1628480
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    |||||||||||| |||||||||||||||||||||||    
T  1628515 acagggcatcaaaccctcaactttaatgagtatgca 1628480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 12122519 - 12122484
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  12122519 acagggcatcaagccctcaacttaaatgagtatgca 12122484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 14047974 - 14048009
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||| |||||||||||||||||||||||||    
T  14047974 aaataggctcccagggcatcaagccctcaactttaa 14048009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 17875068 - 17875103
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  17875068 acagggcatcaagccctcaacttaaatgagtatgca 17875103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 18319304 - 18319269
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||| |||||||||||||||||||||||||    
T  18319304 aaataggctctcagggcatcaagccctcaactttaa 18319269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 21330555 - 21330516
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  21330555 cagggcattaagcccccaactttaatgagtatgcatggac 21330516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 21558043 - 21558008
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  21558043 acagggcatcaagccctcaacttaaatgagtatgca 21558008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 24066999 - 24067034
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||| |||||||||||||||||||||||||    
T  24066999 aaataggctcccagggcatcaagccctcaactttaa 24067034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 36155053 - 36155018
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||| |||||||||||||||||||||||||    
T  36155053 aaataggctcccagggcatcaagccctcaactttaa 36155018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 265122 - 265088
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  265122 aaataggctcccagggcatcaagccctcaacttta 265088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 11581554 - 11581520
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  11581554 aaataggctcccagggcatcaagccctcaacttta 11581520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 12122572 - 12122542
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  12122572 aaataggctcacagggcatcaagccctcaac 12122542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 14047930 - 14047964
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  14047930 aaataggctcccagggcatcaagccctcaacttta 14047964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 19920725 - 19920759
Alignment:
Q  30 catcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||| |||||||||||||||||    
T  19920725 catcaagccctcaacttaaatgagtatgcatggac 19920759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 21309090 - 21309060
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  21309090 aaataggctcacagggcatcaagccctcaac 21309060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26761416 - 26761462
Alignment:
Q  1 caacttatagagc-aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||    
T  26761416 caacttatagagcgaaaaaggctcacagggcatcaagcccccaactt 26761462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 36155097 - 36155063
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  36155097 aaataggctcccagggcatcaagccctcaacttta 36155063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8834248 - 8834199
Alignment:
Q  1 caacttatagagc-aaataggctcacagggcatcaagccctcaactttaa 49  Q
    ||||||||||||| ||| ||||||||||||| |||||||| |||||||||    
T  8834248 caacttatagagcgaaaaaggctcacagggcgtcaagcccccaactttaa 8834199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 20565462 - 20565507
Alignment:
Q  20 gctcacagggcatcaagccctcaacttt-aatgagtatgcatggac 64  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||||    
T  20565462 gctcacagagcatcaaaccctcaactttaaatgagtatgcatggac 20565507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 21406673 - 21406628
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    ||||||| |||||||||||||||||||  |||||||||||||||||    
T  21406673 gctcacatggcatcaagccctcaacttcaaatgagtatgcatggac 21406628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 2154967 - 2154935
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  2154967 aaataggctcccagggcatcaagccctcaactt 2154935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 14026969 - 14026929
Alignment:
Q  6 tatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||| ||||||||||||| |||||||| ||||||||||    
T  14026969 tatagagaaaataggctcacaaggcatcaaaccctcaactt 14026929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20198824 - 20198777
Alignment:
Q  1 caacttatagagcaaata--ggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||| | |  ||||||||||||||||||||||||||||    
T  20198824 caacttatagagcacaaaagggctcacagggcatcaagccctcaactt 20198777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 22411995 - 22412027
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  22411995 aaataggctcccagggcatcaagccctcaactt 22412027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 22412038 - 22412070
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  22412038 aaataggctcccagggcatcaagccctcaactt 22412070  T

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Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 12622418 - 12622489
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12622418 caacgtatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggactcagcaac 12622489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 35659708 - 35659780
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaacttta-atgagtatgcatggacccagcaac 72  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  35659708 caacgtatagagcaaataggctcacagggcatcaagcccccaactttagatgagtatgcatggactcagcaac 35659780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 14629711 - 14629774
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  14629711 caacttatagagcaaataggctcacagggcatcaagcccccaactataatgagtgtgcatggac 14629774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 26444856 - 26444926
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  26444856 caacatatagagcaaatagactcacagggcatcaagccctcaac-ttaatgagtatgcatggactcagcaac 26444926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 46225624 - 46225554
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||    
T  46225624 caacgtatagagcaaataggctcacagggcatcaaaccctcaac-ttaatgagtatgcatggactcagcaac 46225554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46740115 - 46740184
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagca 70  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  46740115 caacgtatagagaaaataggctcacagggcatcaagcccccaactttaaagagtatgcatggactcagca 46740184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 16027090 - 16027044
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16027090 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 16027044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 50160055 - 50160101
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  50160055 aggctcacagggcatcaagccctcaacttgaatgagtatgcatggac 50160101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 19566993 - 19566945
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  19566993 acagggcatcaagccctcaactttaatgagtatgcaaggactcagcaac 19566945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21061515 - 21061558
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  21061515 caacttaaagagcaaataggctcacagggcatcaagccctcaac 21061558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 40906814 - 40906857
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatg 61  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  40906814 aggctcacagggcatcaagccctcaacttgaatgagtatgcatg 40906857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19567061 - 19567016
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||    
T  19567061 caacgtatagagcaaatgggctcacagggcatcaagccctcaactt 19567016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19734328 - 19734398
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt-taatgagtatgcatggacccagcaac 72  Q
    ||||||| ||||||||  ||||||||| ||||||||||||||||||  ||||||||||||||||| |||||||    
T  19734328 caacttaaagagcaaa--ggctcacagagcatcaagccctcaacttccaatgagtatgcatggactcagcaac 19734398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 33244191 - 33244146
Alignment:
Q  20 gctcacagggcatcaagccctcaacttt-aatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  33244191 gctcacagggcatcaagccctcaactttgaatgagtatgcatggac 33244146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 10357488 - 10357448
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  10357488 acagggcatcaagccctcaacttaaatgagtatgcatggac 10357448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 11424992 - 11425036
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  11424992 gctcacagggcatcaagccctcaacgtaaatgagtatgcatggac 11425036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 16042918 - 16042962
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||| |||||||||| |||||||||||||||||    
T  16042918 gctcacagggcatcaaaccctcaacttaaatgagtatgcatggac 16042962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 16997565 - 16997609
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  16997565 gctcacagggcatcaagccctcaacgtaaatgagtatgcatggac 16997609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 55582286 - 55582326
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  55582286 acagggcatcaagcccccaactttaatgagtatgcatggac 55582326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 20519 - 20554
Alignment:
Q  9 agagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  20519 agagcaaataggctcacagggcatcaagccctcaac 20554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 2425607 - 2425572
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||||||||||||||||    
T  2425607 acagggcatcaagccctcaactttaatgagtatgca 2425572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 13592316 - 13592277
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  13592316 cagggcatcaagcccccaactttaatgagtatgcatggac 13592277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 15791593 - 15791632
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  15791593 cagggcatcaagcccccaactttaatgagtatgcatggac 15791632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 15791682 - 15791721
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  15791682 cagggcatcaagcccccaactttaatgagtatgcatggac 15791721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 25512586 - 25512629
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||| ||||||||||| |||||||    
T  25512586 gcatcaagccctcaactttaatgattatgcatggactcagcaac 25512629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 35812485 - 35812446
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatgga 63  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  35812485 acagggcatcaagccctcaacttaaatgagtatgcatgga 35812446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 20604 - 20650
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||    
T  20604 aggctcacatggcatcaagccctcaacttatatgagtatgcatggac 20650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 14507624 - 14507670
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||    
T  14507624 agggcatcaagccctcaactttaatgagtatgcaaagactcagcaac 14507670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 15364965 - 15365010
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  15364965 aggctcacagggcatcaagccctcaac-tcaatgagtatgcatggac 15365010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 19738143 - 19738188
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  19738143 aggctcacagggcatcaagccctcaac-tcaatgagtatgcatggac 19738188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 9637864 - 9637909
Alignment:
Q  20 gctcacagggcatcaagccctcaacttt-aatgagtatgcatggac 64  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||    
T  9637864 gctcacagagcatcaagccctcaactttaaatgagtatgcatggac 9637909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 9871574 - 9871529
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  9871574 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 9871529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 40229491 - 40229536
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  40229491 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 40229536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 15042172 - 15042136
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| |||||||||||||||||    
T  15042172 ggcatcaagccctcaacttaaatgagtatgcatggac 15042136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 15112252 - 15112288
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| |||||||||||||||||    
T  15112252 ggcatcaagccctcaacttaaatgagtatgcatggac 15112288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 19609328 - 19609368
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  19609328 acagggcatcaagtcctcaacttaaatgagtatgcatggac 19609368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 25090691 - 25090735
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||  | |||||||||||||||||    
T  25090691 gctcacagggcatcaagccctcaaagtaaatgagtatgcatggac 25090735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 32467297 - 32467253
Alignment:
Q  21 ctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||  |||||||||||||||||    
T  32467297 ctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 32467253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 42874837 - 42874881
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||    
T  42874837 gctcacagggcatcaagccctcaacgtaaatgagtatccatggac 42874881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 14280205 - 14280240
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||| |||||||||||||||||||||||||    
T  14280205 aaataggctcccagggcatcaagccctcaactttaa 14280240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 20149721 - 20149756
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||| |||||||||||||||||||||||||    
T  20149721 aaataggctcccagggcatcaagccctcaactttaa 20149756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 45315282 - 45315239
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||| |||||||| || |||||||    
T  45315282 gcatcaagccctcaactttaatgattatgcatgaactcagcaac 45315239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 1837863 - 1837829
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  1837863 aaataggctcccagggcatcaagccctcaacttta 1837829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 14280161 - 14280195
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  14280161 aaataggctcccagggcatcaagccctcaacttta 14280195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 14718320 - 14718286
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  14718320 aaataggctcccagggcatcaagccctcaacttta 14718286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 18239773 - 18239739
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  18239773 aaataggctcccagggcatcaagccctcaacttta 18239739  T

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Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 26922717 - 26922675
Alignment:
Q  30 catcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||| ||||||||||||||||||||||| |||| |||||||    
T  26922717 catcaaaccctcaactttaatgagtatgcaaggactcagcaac 26922675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 27995807 - 27995852
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||    
T  27995807 aggctcacagggcatcaagccctcaa-atcaatgagtatgcatggac 27995852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 44102103 - 44102137
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  44102103 aaataggctctcagggcatcaagccctcaacttta 44102137  T

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Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 44773441 - 44773407
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  44773441 aaataggctcccagggcatcaagccctcaacttta 44773407  T

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Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 50222693 - 50222659
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  50222693 aaataggctcccagggcatcaagccctcaacttta 50222659  T

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Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 13036768 - 13036723
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  || ||||||||||||||    
T  13036768 gctcacagggcatcaagccctcaacttcaaacgagtatgcatggac 13036723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 19435777 - 19435732
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||    
T  19435777 gctcacagagcatcaagccctcaacttcaaatgagtatgcatggac 19435732  T

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Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44024558 - 44024509
Alignment:
Q  1 caacttatagagc-aaataggctcacagggcatcaagccctcaactttaa 49  Q
    ||||||||||||| ||| |||||||||||||||||| ||| |||||||||    
T  44024558 caacttatagagcgaaaaaggctcacagggcatcaaacccccaactttaa 44024509  T

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Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 10357521 - 10357489
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  10357521 aaataggctcacagggcatcaaaccctcaactt 10357489  T

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Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 15042252 - 15042220
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  15042252 aaataggctcacagggcatcaatccctcaactt 15042220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 15112172 - 15112204
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  15112172 aaataggctcacagggcatcaatccctcaactt 15112204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 15355636 - 15355604
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  15355636 aaataggctcccagggcatcaagccctcaactt 15355604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 18215585 - 18215553
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  18215585 aaataggctcccagggcatcaagccctcaactt 18215553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 19609252 - 19609284
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||| ||||||||||||||||||||||||||    
T  19609252 aaatagactcacagggcatcaagccctcaactt 19609284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 35812561 - 35812529
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||| |||||||||||||||||||    
T  35812561 aaataggctcacatggcatcaagccctcaactt 35812529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 44024486 - 44024454
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatg 61  Q
    ||||||| |||||||||||||||||||||||||    
T  44024486 gcatcaaaccctcaactttaatgagtatgcatg 44024454  T

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Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 94)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11191984 - 11192047
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11191984 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 11192047  T

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Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11562490 - 11562553
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  11562490 caacttatagagcaaataggctcacagggcatcaagccctacactttaatgagtatgcacggac 11562553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 17207173 - 17207231
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaacttta-atgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17207173 atagagcaaataggctcacagggcatcaagccctcaactttagatgagtatgcatggac 17207231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 14519387 - 14519451
Alignment:
Q  1 caacttatagagc-aaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14519387 caacgtatagagcgaaaaaggctcacagggcatcaagccctcaactttaatgagtatgcatggac 14519451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 16044408 - 16044472
Alignment:
Q  8 tagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| |||||||    
T  16044408 tagagcaaataggctcacagggcatcaagccctcaacttaaatgggtacgcatggactcagcaac 16044472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 19569326 - 19569272
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  19569326 aggctcacagggcatcaagccctcaacttaaatgagtatgcatggactcagcaac 19569272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 54331431 - 54331369
Alignment:
Q  11 agcaaataggctcacagggcatcaagccctcaacttta-atgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||    
T  54331431 agcaaataggctcacagggcatcaagccctcaagtttagatgagtatgcatggactcagcaac 54331369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 6155693 - 6155742
Alignment:
Q  23 cacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6155693 cacagggcatcaagccctcaactttaatgagtatgcatggactcagcaac 6155742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 16059267 - 16059331
Alignment:
Q  8 tagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||  ||||||| |||||||    
T  16059267 tagagcaaataggctcacagggcatcaagccctcaacttaaatgggtacacatggactcagcaac 16059331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17259259 - 17259196
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||| |||||| |||||| |||||||||||||||| || |||||||||||||||||    
T  17259259 caacttatagagaaaatagtctcacatggcatcaagccctcaatttaaatgagtatgcatggac 17259196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19569381 - 19569338
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  19569381 caacttatagagcaaataggctcacagggcatcaagccctcaac 19569338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 24545678 - 24545733
Alignment:
Q  17 taggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||    
T  24545678 taggctcataggacatcaagccctcaactttaatgagtatgcatggactcagcaac 24545733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17259299 - 17259254
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  17259299 caacttatagagcgaataggctcacagggcatcaagccctcaactt 17259254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 17044100 - 17044148
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  17044100 acagggcatcaagccctcaacttaaatgagtatgcatggactcagcaac 17044148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 37427610 - 37427654
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  37427610 gctcacagggcatcaagccctcaacttaaatgagtatgcatggac 37427654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 16728335 - 16728388
Alignment:
Q  20 gctcacagggcatcaagccctcaacttt-aatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  16728335 gctcacagggcatcaaaccctcaactttgaatgagtatgcatggactcagcaac 16728388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 5214922 - 5214962
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  5214922 acagggcatcaagccctcaacttaaatgagtatgcatggac 5214962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 14507908 - 14507948
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  14507908 acagggcatcaagccctcaacttaaatgagtatgcatggac 14507948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 16049884 - 16049948
Alignment:
Q  8 tagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||| ||| |||||||| |||||||    
T  16049884 tagagcaaataggcttacaaggcatgaagccctcaacttaaatgggtacgcatggactcagcaac 16049948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 17207127 - 17207171
Alignment:
Q  2 aacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||    
T  17207127 aacttatagagcaaataggctcacatggcatcaagtcctcaactt 17207171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 17519953 - 17519913
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  17519953 acagggcatcaagccctcaacttaaatgagtatgcatggac 17519913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 17534815 - 17534775
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  17534815 acagggcatcaagccctcaacttaaatgagtatgcatggac 17534775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 20417126 - 20417177
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  20417126 gctcacagggca-caagccctcaacttaaatgagtatgcatggactcagcaac 20417177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 22307631 - 22307591
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  22307631 acagggcatcaagccctcaacttgaatgagtatgcatggac 22307591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 40807000 - 40807040
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  40807000 acagggcatcaagccctcaacttaaatgagtatgcatggac 40807040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 40811815 - 40811855
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  40811815 acagggcatcaagccctcaacttaaatgagtatgcatggac 40811855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 15206844 - 15206883
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  15206844 cagggcatcaagcccccaactttaatgagtatgcatggac 15206883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 16059229 - 16059264
Alignment:
Q  11 agcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  16059229 agcaaataggctcacagggcatcaagccctcaactt 16059264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 17538111 - 17538150
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatgga 63  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  17538111 acagggcatcaagccctcaacttaaatgagtatgcatgga 17538150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 14642556 - 14642511
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  14642556 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 14642511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 16044368 - 16044405
Alignment:
Q  9 agagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  16044368 agagcaaataggctcacagggcatcaacccctcaactt 16044405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 45531622 - 45531569
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggacccagcaac 72  Q
    ||||| |||||||||||||||||||||  ||||||||||||||||| |||||||    
T  45531622 gctcatagggcatcaagccctcaacttccaatgagtatgcatggactcagcaac 45531569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 1208980 - 1208932
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||| || ||||||||| ||||||||||| |||||||    
T  1208980 acagggcatcaagcccccagctttaatgattatgcatggactcagcaac 1208932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 2842466 - 2842422
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||    
T  2842466 gctcatagggcatcaagccctcaacgtaaatgagtatgcatggac 2842422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 5206647 - 5206611
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5206647 ggcatcaagccctcaacttaaatgagtatgcatggac 5206611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 5214846 - 5214878
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  5214846 aaataggctcacagggcatcaagccctcaactt 5214878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 9512058 - 9512011
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||| || |||||||||||||||||||||||||||| |||||||    
T  9512058 acagggcatgaa-ccctcaactttaatgagtatgcatggactcagcaac 9512011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 9520033 - 9519986
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||| || |||||||||||||||||||||||||||| |||||||    
T  9520033 acagggcatgaa-ccctcaactttaatgagtatgcatggactcagcaac 9519986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 14507832 - 14507864
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  14507832 aaataggctcacagggcatcaagccctcaactt 14507864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 15932502 - 15932466
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcat 60  Q
    ||||||||||||||||||||||| |||||||||||||    
T  15932502 acagggcatcaagccctcaacttaaatgagtatgcat 15932466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 15932578 - 15932546
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  15932578 aaataggctcacagggcatcaagccctcaactt 15932546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 17548639 - 17548607
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  17548639 aaataggctcacagggcatcaagccctcaactt 17548607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 30175562 - 30175522
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  30175562 acagggcatcaagccctcaacttaaatgagtaagcatggac 30175522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 35065594 - 35065550
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||    
T  35065594 gctcacagggcatcaggccctcaacgtaaatgagtatgcatggac 35065550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 40806924 - 40806956
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  40806924 aaataggctcacagggcatcaagccctcaactt 40806956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 41173443 - 41173411
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  41173443 aaataggctcacagggcatcaagccctcaactt 41173411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 50756367 - 50756327
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||| |||||||||||||||||||||||| |||||||||||    
T  50756367 acagagcatcaagccctcaactttaatgattatgcatggac 50756327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 9577534 - 9577573
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  9577534 cagggcatcaagcccccaacttaaatgagtatgcatggac 9577573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 9707960 - 9707921
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaatgag 53  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  9707960 aaataggctcccagggcatcaagccctcaactttattgag 9707921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 13026684 - 13026649
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  13026684 acagggcatcaagccctcaacttaaatgagtatgca 13026649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 13031773 - 13031738
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  13031773 acagggcatcaagccctcaacttaaatgagtatgca 13031738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 15245926 - 15245965
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  15245926 cagggcatcaagcccccaactttaataagtatgcatggac 15245965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 17548563 - 17548528
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  17548563 acagggcatcaagccctcaacttaaatgagtatgca 17548528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 23318926 - 23318887
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  23318926 caggacatcaagcccccaactttaatgagtatgcatggac 23318887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24545591 - 24545634
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||    
T  24545591 caacttatagagcaaataggatcatagggcatcaagcccccaac 24545634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 172
Target Start/End: Original strand, 11192103 - 11192137
Alignment:
Q  138 agcgactttggaaataacttgcaacttaacgatat 172  Q
    ||||||||||| |||||||||||||||||||||||    
T  11192103 agcgactttggcaataacttgcaacttaacgatat 11192137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 172
Target Start/End: Original strand, 11562591 - 11562625
Alignment:
Q  138 agcgactttggaaataacttgcaacttaacgatat 172  Q
    ||||||||||| |||||||||||||||||||||||    
T  11562591 agcgactttggcaataacttgcaacttaacgatat 11562625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 13152145 - 13152111
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  13152145 aaataggctcccagggcatcaagccctcaacttta 13152111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 13154610 - 13154576
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  13154610 aaataggctcccagggcatcaagccctcaacttta 13154576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 15977320 - 15977354
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  15977320 aaataggctcccagggcatcaagccctcaacttta 15977354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 17538058 - 17538088
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  17538058 aaataggctcacagggcatcaagccctcaac 17538088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 21618299 - 21618333
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  21618299 aaataggctcccagggcatcaagccctcaacttta 21618333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 22307684 - 22307654
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  22307684 aaataggctcacagggcatcaagccctcaac 22307654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 34159134 - 34159168
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  34159134 aaataggctcccagggcatcaagccctcaacttta 34159168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 36166405 - 36166439
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  36166405 aaataggctcccagggcatcaagccctcaacttta 36166439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 45607261 - 45607227
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  45607261 aaataggctcccagggcatcaagccctcaacttta 45607227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 172
Target Start/End: Original strand, 6155809 - 6155842
Alignment:
Q  139 gcgactttggaaataacttgcaacttaacgatat 172  Q
    |||||||||| |||||||||||||||||||||||    
T  6155809 gcgactttggcaataacttgcaacttaacgatat 6155842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 12512825 - 12512780
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||    
T  12512825 gctcacagggcatcaatccctcaacttaaaatgagtatgcatggac 12512780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 14153470 - 14153425
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||    
T  14153470 gctcacagagcatcaagccctcaacttcaaatgagtatgcatggac 14153425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 16049844 - 16049881
Alignment:
Q  9 agagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  16049844 agagaaaataggctcacggggcatcaagccctcaactt 16049881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 17693127 - 17693172
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||    
T  17693127 gctcacagggcatcaagccctcaacttcaaatgagtgtgcatggac 17693172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 46751955 - 46752000
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||    
T  46751955 gctcacagagcatcaagccctcaacttcaaatgagtatgcatggac 46752000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 5206727 - 5206695
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  5206727 aaataggctcacagggcatcaaaccctcaactt 5206695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 8898903 - 8898935
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  8898903 aaataggctcccagggcatcaagccctcaactt 8898935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 11191945 - 11191989
Alignment:
Q  2 aacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||| || |||||||||||| ||||||||||||| ||||||    
T  11191945 aacttataaagaaaataggctcaccgggcatcaagcccccaactt 11191989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 11886678 - 11886634
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||| ||||||||||||||||| |  ||||||||||||||||    
T  11886678 gctcacatggcatcaagccctcaacatatatgagtatgcatggac 11886634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 13031849 - 13031817
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||| |||||    
T  13031849 aaataggctcacagggcatcaagcccttaactt 13031817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 15448071 - 15448039
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||| |||||||||||||||||||    
T  15448071 aaataggctcacatggcatcaagccctcaactt 15448039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 17520029 - 17519997
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  17520029 aaataggctcacagggcatcaaaccctcaactt 17519997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 17520094 - 17520062
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  17520094 aaataggctcacagggcatcaaaccctcaactt 17520062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 17534891 - 17534859
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  17534891 aaataggctcacagggcatcaaaccctcaactt 17534859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 18700707 - 18700671
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatg 61  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  18700707 cagggcatcaagcccccaacttaaatgagtatgcatg 18700671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 19884533 - 19884493
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||| ||||||||||| | |||||||||||||||||    
T  19884533 acagggcattaagccctcaacgtaaatgagtatgcatggac 19884493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 24153475 - 24153443
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  24153475 aaataggctcccagggcatcaagccctcaactt 24153443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 29172894 - 29172862
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  29172894 aaataggctcccagggcatcaagccctcaactt 29172862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 29172937 - 29172905
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  29172937 aaataggctcccagggcatcaagccctcaactt 29172905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 30175638 - 30175606
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  30175638 aaataggctcacagggcatcaaaccctcaactt 30175606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 31225028 - 31224996
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||| ||||||||||||||||||    
T  31225028 aaataggctcacagtgcatcaagccctcaactt 31224996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 31415187 - 31415219
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||| ||||||||||||||||||    
T  31415187 aaataggctcacagtgcatcaagccctcaactt 31415219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 40811739 - 40811771
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  40811739 aaataggctcacagggcatcaaaccctcaactt 40811771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 41123699 - 41123731
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  41123699 aaataggctcccagggcatcaagccctcaactt 41123731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 43890108 - 43890076
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  43890108 aaataggctcccagggcatcaagccctcaactt 43890076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 44269567 - 44269611
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||| ||||| ||||||||||| | |||||||||||||||||    
T  44269567 gctcacatggcataaagccctcaacgtaaatgagtatgcatggac 44269611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 45804406 - 45804366
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||| |||||| |||||||||||| |||||||||||    
T  45804406 acagggcattaagcccccaactttaatgattatgcatggac 45804366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3538793 - 3538856
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3538793 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 3538856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1384801 - 1384730
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  1384801 caacttatagagcaaataggctcacagggcatcaagcccttaagtttaatgagtatgcatggactcagcaac 1384730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 18391334 - 18391263
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||    
T  18391334 caacttatagagcaaataggctcatagggcatcaagccctcaacttaaatgagtatgcatggactcagcaac 18391263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 25140931 - 25140988
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  25140931 atagagcaaataggctcacagcgcatcaagccctcaactttaatgagtatggatggac 25140988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 27851614 - 27851678
Alignment:
Q  8 tagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  27851614 tagagcgaataggctcacagggcatcaagccctcagcttaaatgagtatgcatggactcagcaac 27851678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 27860329 - 27860385
Alignment:
Q  8 tagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  27860329 tagagcgaataggctcacagggcatcaagccctcaacttaaatgagtatgcttggac 27860385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 44071538 - 44071583
Alignment:
Q  19 ggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  44071538 ggctcacagggcatcaaaccctcaactttaatgagtatgcatggac 44071583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 21336706 - 21336658
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||    
T  21336706 acagagcatcaagccctcaactttaatgagtatgcatggactcagcaac 21336658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 24835084 - 24835040
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  24835084 gctcacagggcatcaagccctcaacttgaatgagtatgcatggac 24835040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3538753 - 3538798
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||    
T  3538753 caacttatagagcaaataggctcacagggcataaagtcctcaactt 3538798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 19357992 - 19358045
Alignment:
Q  20 gctcacagggcatcaagccctcaacttt-aatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  19357992 gctcacagggcatcaaaccctcaactttgaatgagtatgcatggactcagcaac 19358045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 24865778 - 24865733
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaatgagtatgca 59  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  24865778 aaataggctcacagggcatcaagccctcaacttacatgagtatgca 24865733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 6576217 - 6576257
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  6576217 acagggcatcaagccctcaacttaaatgagtatgcatggac 6576257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 21316804 - 21316764
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  21316804 acagagcatcaagccctcaactttaatgagtatgcatggac 21316764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 22689684 - 22689724
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  22689684 acagggcatcaagccctcaacttaaatgagtatgcatggac 22689724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 22694280 - 22694320
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  22694280 acagggcatcaagccctcaacttaaatgagtatgcatggac 22694320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 24815683 - 24815639
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||| |||||||||||||||| |||||||||||||||||    
T  24815683 gctcacagggtatcaagccctcaacttgaatgagtatgcatggac 24815639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 5985135 - 5985182
Alignment:
Q  18 aggctcacagggcatcaagccctcaacttta-atgagtatgcatggac 64  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  5985135 aggctcacagggaatcaagccctcaactttagatgagtatgcatggac 5985182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27851567 - 27851610
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  27851567 caacgtatagagcaaataggctcacagggcatcaagcccccaac 27851610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 34136849 - 34136888
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  34136849 cagggcatcaagccctcaacttaaatgagtatgcatggac 34136888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 43947577 - 43947538
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  43947577 cagggcatcaagcccccaactttaatgagtatgcatggac 43947538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 18389303 - 18389258
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  18389303 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 18389258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18391374 - 18391329
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||    
T  18391374 caacttatagaccaaatatgctcacaggacatcaagccctcaactt 18391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 19202187 - 19202150
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatg 61  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  19202187 acagggcatcaagccctcaacttgaatgagtatgcatg 19202150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 5032368 - 5032332
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5032368 ggcatcaagccctcaacttaaatgagtatgcatggac 5032332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 9974853 - 9974885
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  9974853 aaataggctcacagggcatcaagccctcaactt 9974885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 19202263 - 19202231
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  19202263 aaataggctcacagggcatcaagccctcaactt 19202231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 19202328 - 19202296
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  19202328 aaataggctcacagggcatcaagccctcaactt 19202296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 21316837 - 21316805
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  21316837 aaataggctcacagggcatcaagccctcaactt 21316805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 22500810 - 22500842
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  22500810 aaataggctcacagggcatcaagccctcaactt 22500842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 22508744 - 22508776
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  22508744 aaataggctcacagggcatcaagccctcaactt 22508776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 24435981 - 24436013
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  24435981 aaataggctcacagggcatcaagccctcaactt 24436013  T

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Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 24781888 - 24781848
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  24781888 acagggcatcaagccctcaacataaatgagtatgcatggac 24781848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 24781987 - 24781955
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  24781987 aaataggctcacagggcatcaagccctcaactt 24781955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 24883466 - 24883506
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  24883466 acagggcatcaagccctcaacttaaattagtatgcatggac 24883506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 25141064 - 25141096
Alignment:
Q  140 cgactttggaaataacttgcaacttaacgatat 172  Q
    |||||||||||||||||||||||||||||||||    
T  25141064 cgactttggaaataacttgcaacttaacgatat 25141096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 36839212 - 36839256
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||| |||||| | |||||||||||||||||    
T  36839212 gctcacagggcatcaagctctcaacataaatgagtatgcatggac 36839256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 9974930 - 9974969
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  9974930 cagggcatcaagccctcaacttaaatgggtatgcatggac 9974969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 14693273 - 14693324
Alignment:
Q  22 tcacagggcatcaagccctcaactt-taatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||| ||||  ||||||||||||||||| |||||||    
T  14693273 tcacagggcatcaagccctcgacttcaaatgagtatgcatggactcagcaac 14693324  T

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Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 18547158 - 18547119
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  18547158 cagggtatcaagcccccaactttaatgagtatgcatggac 18547119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 22500843 - 22500878
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  22500843 acagggcatcaagccctcaacttaaatgagtatgca 22500878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 22508777 - 22508812
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  22508777 acagggcatcaagccctcaacttaaatgagtatgca 22508812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27860282 - 27860325
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||    
T  27860282 caacgtatagagcaaagaggctcacagggcatcaagcccccaac 27860325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 356966 - 356996
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  356966 aaataggctcacagggcatcaagccctcaac 356996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 5032488 - 5032458
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  5032488 aaataggctcacagggcatcaagccctcaac 5032458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 18808751 - 18808785
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  18808751 aaataggctcccagggcatcaagccctcaacttta 18808785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 24529884 - 24529850
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  24529884 aaataggctcccagggcatcaagccctcaacttta 24529850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 24865885 - 24865855
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  24865885 aaataggctcacagggcatcaagccctcaac 24865855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 32039852 - 32039818
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  32039852 aaataggctcccagggcatcaagccctcaacttta 32039818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 23969639 - 23969606
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatg 57  Q
    ||||||||||||||||||||||| ||||||||||    
T  23969639 acagggcatcaagccctcaacttaaatgagtatg 23969606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 25045050 - 25045095
Alignment:
Q  20 gctcacagggcatcaagccctcaac-tttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||    
T  25045050 gctcacagggcatcaagccctcaacatcaaatgagtatgcatggac 25045095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25085404 - 25085453
Alignment:
Q  1 caacttatagagcaaata-ggctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||||||||| | |||||||||||| |||||||| |||||||||    
T  25085404 caacttatagagcaaaaaaggctcacagggcgtcaagcccccaactttaa 25085453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 28576908 - 28576941
Alignment:
Q  15 aataggctcacagggcatcaagccctcaacttta 48  Q
    ||||||||| ||||||||||||||||||||||||    
T  28576908 aataggctcccagggcatcaagccctcaacttta 28576941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 357019 - 357051
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtat 56  Q
    ||||||||||||||||||||||| |||||||||    
T  357019 acagggcatcaagccctcaacttaaatgagtat 357051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 6478374 - 6478342
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  6478374 aaataggctcacagggcatcaaaccctcaactt 6478342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 21155413 - 21155381
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  21155413 aaataggctcccagggcatcaagccctcaactt 21155381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 21336827 - 21336795
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  21336827 aaataggctcacagggcatcaaaccctcaactt 21336795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 21367781 - 21367813
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||| |||||||||||||||||||||    
T  21367781 aaataggctcatagggcatcaagccctcaactt 21367813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 22259019 - 22259059
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggacccagc 69  Q
    ||||||| | |||||||||||||||||||||||||| ||||    
T  22259019 gcatcaatctctcaactttaatgagtatgcatggactcagc 22259059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 23712366 - 23712334
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  23712366 aaataggctcccagggcatcaagccctcaactt 23712334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 23969672 - 23969640
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  23969672 aaataggctcacagggcatcaaaccctcaactt 23969640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 24436057 - 24436097
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||| ||||| ||||||| |||||||||||||||||    
T  24436057 acagggcattaagccttcaacttaaatgagtatgcatggac 24436097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 24643304 - 24643272
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  24643304 aaataggctcccagggcatcaagccctcaactt 24643272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 24883390 - 24883422
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||| ||||||||||||||||||    
T  24883390 aaataggctcacagtgcatcaagccctcaactt 24883422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 27851534 - 27851570
Alignment:
Q  8 tagagcaaataggctcacagggcatcaagccctcaac 44  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  27851534 tagagcgaataggctcacagggcatcaagcccccaac 27851570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 27860249 - 27860285
Alignment:
Q  8 tagagcaaataggctcacagggcatcaagccctcaac 44  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  27860249 tagagcgaataggctcacagggcatcaagcccccaac 27860285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 28653515 - 28653472
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  28653515 gctcacagggcatcaagcc-tcaacgtaaatgagtatgcatggac 28653472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1695 - 1765
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaa 71  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  1695 caacttatagagcaaataggctcacagggcatcaagtcctcaactttaatgagtatgcatggactcagcaa 1765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3706 - 3769
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3706 caacgtatagagcaaataggctcacagggcatcaaaccctcaactttaatgagtatgcatggac 3769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 7e-27; HSPs: 97)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 48213945 - 48213880
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48213945 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggactcagcaac 48213880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19558332 - 19558269
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19558332 caacttatagagctaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 19558269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 9744153 - 9744087
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaacttta-atgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  9744153 atagagcaaataggctcacagggcatcaagccctcaactttagatgagtatgcatggactcagcaac 9744087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 11053666 - 11053730
Alignment:
Q  8 tagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  11053666 tagagcaaataggctcacagggcatcaagccctcaacttaaatgagtattcatggactcagcaac 11053730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 48809555 - 48809484
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  48809555 caacttatagagcgaataggttcacagggcatcaagccctcaacttaaatgagtatgcgtggactcagcaac 48809484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 13133555 - 13133491
Alignment:
Q  8 tagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  13133555 tagagcgaataggctcacagggcatcaagccctcagcttaaatgagtatgcatggactcagcaac 13133491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 15281297 - 15281361
Alignment:
Q  8 tagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||| |||||||    
T  15281297 tagagcaaatagactcacagggcattaagccctcaacttaaatgagtatgcatggactcagcaac 15281361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16077394 - 16077457
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||| |||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  16077394 caactaatagagaaaataggctcacagggcatcaaacccttaactttaatgagtatgcatggac 16077457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 12371272 - 12371322
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12371272 aaataggctcacagggcatcaagccctcaacttgaatgagtatgcatggac 12371322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 15576974 - 15576920
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  15576974 aggctcatagggcatcaagccctcaactttaatgagtatgcatggactcagcaac 15576920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 4070760 - 4070825
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||| |||||||| |  |||||||||||||||| |||||||    
T  4070760 atagagcaaataggctcacagggcatcaaaccctcaacatatatgagtatgcatggactcagcaac 4070825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15139079 - 15139124
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15139079 caacttatagagcaaataggctcacagggcatcaagccctcaactt 15139124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 22001307 - 22001263
Alignment:
Q  2 aacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  22001307 aacttatagagcaaataggctcacagggcatcaagccctcaactt 22001263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33000949 - 33000992
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  33000949 caacttatagagcaaataggctcacagggcatcaagccctcaac 33000992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 14183684 - 14183634
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||    
T  14183684 aaataggctcacagggcatcaagccctcaagttaaatgagtatgcatggac 14183634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14220070 - 14220000
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaacttt-aatgagtatgcatggacccagcaac 72  Q
    |||| |||||||||||  ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||    
T  14220070 caacgtatagagcaaa--ggctcacagagcatcaagccctcaactttaaatgagtatgcatggactcagcaac 14220000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 8136088 - 8136040
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  8136088 acagggcatcaagccctcaactttaatgagtatgcatagactcagcaac 8136040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11053618 - 11053661
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  11053618 caacttaaagagcaaataggctcacagggcatcaagccctcaac 11053661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 33001004 - 33001059
Alignment:
Q  18 aggctcacagggcatcaagccctcaacttta-atgagtatgcatggacccagcaac 72  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  33001004 aggctcacagggcattaagccctcaactttatatgagtatgcatggactcagcaac 33001059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 12128222 - 12128172
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||||||||    
T  12128222 aaataggctcaaagggcatcaaaccctcaacttaaatgagtatgcatggac 12128172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4070713 - 4070758
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  4070713 caacttatagagcaaataggctcacatggcatcaagctctcaactt 4070758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19558372 - 19558327
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||    
T  19558372 caacttatagagcaaataggctcacagggcataaagtcctcaactt 19558327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 8852213 - 8852173
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  8852213 acagggcatcaagccctcaacttaaatgagtatgcatggac 8852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 13150584 - 13150544
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  13150584 acagggcatcaagccctcaacttaaatgagtatgcatggac 13150544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 15096685 - 15096645
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  15096685 acagggcatcaaaccctcaactttaatgagtatgcatggac 15096645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 19282130 - 19282174
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  19282130 gctcacagggcatcaagccctcaacgtaaatgagtatgcatggac 19282174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 20619289 - 20619329
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  20619289 acagggcatcaagccctcaacttgaatgagtatgcatggac 20619329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 24270819 - 24270771
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  24270819 acagggcatcaagcccccaactttaatgattatgcatggactcagcaac 24270771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 25941393 - 25941441
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  25941393 acagggcatcaagcccccaactttaatgattatgcatggactcagcaac 25941441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 46387110 - 46387070
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  46387110 acagggcatcaagccctcaacttaaatgagtatgcatggac 46387070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 47094138 - 47094174
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||||||||||||    
T  47094138 ggcatcaagccctcaactttaatgagtatgcatggac 47094174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 131029 - 130990
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  131029 cagggcatcaagccctcaacttaaatgagtatgcatggac 130990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13133602 - 13133559
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  13133602 caacgtatagagcaaataggctcacagggcatcaagcccccaac 13133559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 14153923 - 14153880
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||| ||||||||||| |||||||    
T  14153923 gcatcaagccctcaactttaatgattatgcatggactcagcaac 14153880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 38519281 - 38519320
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  38519281 cagggcatcaagccctcaacttaaatgagtatgcatggac 38519320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 18075574 - 18075536
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  18075574 agggcatcaagccctcaacttaaatgagtatgcatggac 18075536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 10660261 - 10660216
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  10660261 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 10660216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 13699760 - 13699715
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  13699760 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 13699715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15139039 - 15139084
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||    
T  15139039 caacgtatagagcaaatagactcacagggcatcaagcccccaactt 15139084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 36705676 - 36705631
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  36705676 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 36705631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 48809595 - 48809550
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| |||||||| ||||||||||||||||||||||||| ||||||    
T  48809595 caacatatagagcgaataggctcacagggcatcaagcccccaactt 48809550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 59440 - 59400
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  59440 acagggcatcaagccctcaacttaaatgagcatgcatggac 59400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 8852289 - 8852257
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  8852289 aaataggctcacagggcatcaagccctcaactt 8852257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 11066396 - 11066428
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  11066396 aaataggctcacagggcatcaagccctcaactt 11066428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 15139151 - 15139195
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||| ||||| |||||||||||||||||||||| |||||||    
T  15139151 ggcatcaaaccctcgactttaatgagtatgcatggactcagcaac 15139195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 18075609 - 18075577
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  18075609 aaataggctcacagggcatcaagccctcaactt 18075577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 18875916 - 18875880
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| |||||||||||||||||    
T  18875916 ggcatcaagccctcaacttaaatgagtatgcatggac 18875880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 20585394 - 20585438
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  20585394 gctcacagggcatcaagccatcaacgtaaatgagtatgcatggac 20585438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 20619213 - 20619245
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  20619213 aaataggctcacagggcatcaagccctcaactt 20619245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 48811829 - 48811861
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  48811829 aaataggctcacagggcatcaagccctcaactt 48811861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 4691803 - 4691760
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||| | ||||||||||| |||||||    
T  4691803 gcatcaagccctcaactttaataattatgcatggactcagcaac 4691760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 9033556 - 9033521
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9033556 gcatcaagcccccaactttaatgagtatgcatggac 9033521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 12466273 - 12466230
Alignment:
Q  21 ctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| |||||||| | |||||||||||||||||    
T  12466273 ctcacagggcatcaaaccctcaacgtaaatgagtatgcatggac 12466230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 13746008 - 13745965
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||| | ||||||||||| |||||||    
T  13746008 gcatcaagccctcaactttaataattatgcatggactcagcaac 13745965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15281249 - 15281292
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||| |||||||||||||||||| | |||||||||||||||    
T  15281249 caacttaaagagcaaataggctcacacgacatcaagccctcaac 15281292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 16996131 - 16996170
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  16996131 cagggcatcaagcccccaacttaaatgagtatgcatggac 16996170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 17062187 - 17062152
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||| |||||||||||||||||||||||||    
T  17062187 aaataggctcccagggcatcaagccctcaactttaa 17062152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 36686248 - 36686213
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  36686248 acagggcatcaagccctcaacttaaatgagtatgca 36686213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 43747457 - 43747492
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    |||||||||||| |||||||||||||||||||||||    
T  43747457 acagggcatcaaaccctcaactttaatgagtatgca 43747492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8136154 - 8136111
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||  ||||||| ||||||||||||||||||||||    
T  8136154 caacttatagagca--taggctctcagggcatcaagccctcaactt 8136111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8136195 - 8136149
Alignment:
Q  1 caacttatagagca-aataggctcacagggcatcaagccctcaactt 46  Q
    |||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  8136195 caacgtatagagcataataggctcacagggcatcaagcccccaactt 8136149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 11972304 - 11972338
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  11972304 aaataggctcccagggcatcaagccctcaacttta 11972338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 12128264 - 12128234
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  12128264 aaataggctcacagggcatcaagccctcaac 12128234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 12371230 - 12371260
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  12371230 aaataggctcacagggcatcaagccctcaac 12371260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 13150702 - 13150672
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  13150702 aaataggctcacagggcatcaagccctcaac 13150672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 16232328 - 16232362
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  16232328 aaataggctcccagggcatcaagccctcaacttta 16232362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 17071294 - 17071252
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatg 61  Q
    |||||||||||||||||||||||||||  ||||||||||||||    
T  17071294 gctcacagggcatcaagccctcaacttcaaatgagtatgcatg 17071252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 39
Target Start/End: Complemental strand, 17130797 - 17130767
Alignment:
Q  9 agagcaaataggctcacagggcatcaagccc 39  Q
    |||||||||||||||||||||||||||||||    
T  17130797 agagcaaataggctcacagggcatcaagccc 17130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 18875973 - 18875943
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  18875973 aaataggctcacagggcatcaagccctcaac 18875943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 21189949 - 21189915
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  21189949 aaataggctcccagggcatcaagccctcaacttta 21189915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 29329231 - 29329197
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  29329231 aaataggctcccagggcatcaagccctcaacttta 29329197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 32125299 - 32125333
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  32125299 aaataggctcccagggcatcaagccctcaacttta 32125333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 46
Target Start/End: Original strand, 38479948 - 38479982
Alignment:
Q  12 gcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||| ||||||||||    
T  38479948 gcaaataggctcacagggcatcaaaccctcaactt 38479982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 41522725 - 41522759
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  41522725 aaataggctcccagggcatcaagccctcaacttta 41522759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 41525187 - 41525221
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  41525187 aaataggctcccagggcatcaagccctcaacttta 41525221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 44373990 - 44374028
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  44373990 agggcatcaagccctcaacgtaaatgagtatgcatggac 44374028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 44382855 - 44382893
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  44382855 agggcatcaagccctcaacgtaaatgagtatgcatggac 44382893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 48213992 - 48213950
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaa 43  Q
    |||| |||| |||||| ||||||||||||||||||||||||||    
T  48213992 caacgtataaagcaaacaggctcacagggcatcaagccctcaa 48213950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 48273199 - 48273233
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  48273199 aaataggctcccagggcatcaagccctcaacttta 48273233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15120387 - 15120338
Alignment:
Q  1 caacttatagagc-aaataggctcacagggcatcaagccctcaactttaa 49  Q
    ||||||||||||| ||| ||||||||||||| |||||||| |||||||||    
T  15120387 caacttatagagcgaaaaaggctcacagggcgtcaagcccccaactttaa 15120338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 22001240 - 22001199
Alignment:
Q  24 acagggcatcaagccctcaacttta-atgagtatgcatggac 64  Q
    |||| |||||||||||||||||||| ||||||||||||||||    
T  22001240 acagagcatcaagccctcaactttagatgagtatgcatggac 22001199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 37785365 - 37785320
Alignment:
Q  20 gctcacagggcatcaagccctcaacttt-aatgagtatgcatggac 64  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||||    
T  37785365 gctcacagagcatcaaaccctcaactttgaatgagtatgcatggac 37785320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 43277825 - 43277780
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||    
T  43277825 gctcacagagcatcaagccctcaacttcaaatgagtatgcatggac 43277780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 11066472 - 11066512
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||| |||||||||| || ||||||||||||||    
T  11066472 acagggcatcaaaccctcaacttaaaagagtatgcatggac 11066512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 13150660 - 13150628
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||| |||||||||||||||||||    
T  13150660 aaataggctcacatggcatcaagccctcaactt 13150628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 14161884 - 14161840
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||  | ||||| |||||||||||    
T  14161884 gctcacagggcatcaagccctcaatgtaaatgattatgcatggac 14161840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14220108 - 14220067
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||||||||||||   |||||||||||||||||||||||||    
T  14220108 caacttatagagcaaaa--gctcacagggcatcaagccctcaac 14220067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 20110407 - 20110439
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  20110407 aaataggctcccagggcatcaagccctcaactt 20110439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 30821941 - 30821909
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||| |||||||||||||||||    
T  30821941 aaataggctcacaggacatcaagccctcaactt 30821909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 32300929 - 32300961
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  32300929 aaataggctcccagggcatcaagccctcaactt 32300961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 32434713 - 32434681
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  32434713 aaataggctcacagggcatcaaaccctcaactt 32434681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 36686324 - 36686292
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  36686324 aaataggctcacagggcatcaaaccctcaactt 36686292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 38227312 - 38227344
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  38227312 aaataggctcccagggcatcaagccctcaactt 38227344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 38480015 - 38480047
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||| |||||||||||||||||||    
T  38480015 aaataggctcacaaggcatcaagccctcaactt 38480047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 42461861 - 42461897
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  42461861 ggcatcaagccctcaacttaaatgagtatacatggac 42461897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 44116360 - 44116392
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  44116360 aaataggctcccagggcatcaagccctcaactt 44116392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 48811765 - 48811797
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  48811765 aaataggctcacagggcatcaaaccctcaactt 48811797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 60; Significance: 1e-25; HSPs: 4)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 7941 - 7871
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7941 caacttatag-gcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggactcagcaac 7871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 7980 - 7936
Alignment:
Q  2 aacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  7980 aacttatagagcaaataggctcacagggcatcaagcccccaactt 7936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 3159 - 3205
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||| |||||||||||||| ||||||| ||||||||||| |||||    
T  3159 aggctcccagggcatcaagccgtcaacttaaatgagtatgcttggac 3205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 5462 - 5506
Alignment:
Q  21 ctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||| |||||||||||||||||||||  |||||||||||||||||    
T  5462 ctcatagggcatcaagccctcaacttcaaatgagtatgcatggac 5506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 66049 - 66120
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||    
T  66049 caacttatagagcaaataggctcacatggcatcaagccctcaacttaaatgagtatgcatggactcagcaac 66120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 15691 - 15733
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggacccagcaa 71  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||    
T  15691 gcatcaagccctctactttaatgattatgcatggactcagcaa 15733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 66009 - 66054
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| ||||||||||||||||||||| ||||||| |||| ||||||    
T  66009 caacgtatagagcaaataggctcacatggcatcatgcccccaactt 66054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23500675 - 23500738
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23500675 caacttatagagcaaataggctcatagggcatcaagccctcaactttaatgagtatgcatggac 23500738  T

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Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 31735938 - 31735867
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  31735938 caacttaaagagcaaataggctcacagggcatcaaaccctcaacttaaatgagtatgcatggactcagcaac 31735867  T

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Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 22556224 - 22556281
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22556224 atagagcaaataggctcacagggcatcaaaccctcaactttaatgagtatgcatggac 22556281  T

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Target: chr6; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23492325 - 23492254
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||    
T  23492325 caacttaaagagtaaataggttcacagggcatcaagccctcaactttaatgagtatgcatgaactcagcaac 23492254  T

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Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23497923 - 23497852
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||    
T  23497923 caacttaaagagtaaataggttcacagggcatcaagccctcaactttaatgagtatgcatgaactcagcaac 23497852  T

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Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 19957977 - 19957912
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||| ||||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||||||    
T  19957977 atagaacaaataggctcacagggtatcaaaccctcaaatttaatgagtatgcatggactcagcaac 19957912  T

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Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 28947476 - 28947548
Alignment:
Q  1 caacttatagagca-aataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| ||||||||| || |||||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  28947476 caacgtatagagcataaaaggctcacagggcatcaaacccccaactttaatgagtatgcatggactcagcaac 28947548  T

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Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 15895830 - 15895884
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  15895830 aggctcacggggcatcaagccctcaacttgaatgagtatgcatggactcagcaac 15895884  T

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Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19958024 - 19957979
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  19958024 caacgtatagagcaaataggctcacagggcatcaagccctcaactt 19957979  T

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Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23500635 - 23500680
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  23500635 caacttaaagagcgaataggctcacagggcatcaagccctcaactt 23500680  T

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Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31735978 - 31735933
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  31735978 caacttaaagagcaaataggcgcacagggcatcaagccctcaactt 31735933  T

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Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17105581 - 17105641
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||| |||||||  ||||| |||||||||||||||||||||| |||||||||||||||||    
T  17105581 caacttattgagcaaa--ggctc-cagggcatcaagccctcaacttaaatgagtatgcatggac 17105641  T

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Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 17229872 - 17229828
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||    
T  17229872 gctcacagggcatcaagccctcaacttaaatgagtatggatggac 17229828  T

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Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 18260220 - 18260177
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  18260220 gctcacagggcatcaagccctcaac-ttaatgagtatgcatggac 18260177  T

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Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 18708504 - 18708544
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  18708504 acagggcatcaagccctcaacttaaatgagtatgcatggac 18708544  T

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Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 20136577 - 20136617
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  20136577 acagggcatcaagccctcaacttaaatgagtatgcatggac 20136617  T

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Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 21680848 - 21680800
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||| ||||||||||||||| |||| |||||||    
T  21680848 acagggcatcaagccctcaaatttaatgagtatgcaaggactcagcaac 21680800  T

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Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 22196292 - 22196252
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  22196292 acagggcatcaagccctcaacttaaatgagtatgcatggac 22196252  T

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Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 23528318 - 23528278
Alignment:
Q  21 ctcacagggcatcaagccctcaactttaatgagtatgcatg 61  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  23528318 ctcacagggcatcaagccctcaacttaaatgagtatgcatg 23528278  T

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Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 25920702 - 25920750
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  25920702 acagggcatcaagcccccaactttaatgattatgcatggactcagcaac 25920750  T

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Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 27126491 - 27126447
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||  |||||||||||||||||    
T  27126491 gctcacagggcatcaagccctcaactcaaatgagtatgcatggac 27126447  T

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Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 18458148 - 18458105
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||| |||||||||||||||||| |||||||    
T  18458148 gcatcaagccctcaactataatgagtatgcatggactcagcaac 18458105  T

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Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 19656347 - 19656308
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  19656347 cagggcatcaagccctcaacttaaatgagtatgcatggac 19656308  T

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Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 27573311 - 27573272
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  27573311 cagggcatcaagccctcaacttaaatgagtatgcatggac 27573272  T

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Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 16245237 - 16245283
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  16245237 aggctcacaggccatcaaaccctcaacttgaatgagtatgcatggac 16245283  T

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Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 22212516 - 22212470
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  22212516 aggctcacatggcatcaagccctcaacttaaatgagtatgcgtggac 22212470  T

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Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 22376903 - 22376858
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  22376903 aggctcacagggcatcaagccctcaac-tcaatgagtatgcatggac 22376858  T

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Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 6083758 - 6083709
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagt-atgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||| | |||||||||| |||||||    
T  6083758 acagggcatcaagccctcaactttaatgattaatgcatggactcagcaac 6083709  T

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Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 16133765 - 16133728
Alignment:
Q  9 agagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| |||||||||||||||||||||||||||||||||    
T  16133765 agagtaaataggctcacagggcatcaagccctcaactt 16133728  T

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Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 18203983 - 18204027
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||| |||||||| | |||||||||||||||||    
T  18203983 gctcacagggcatcaaaccctcaacataaatgagtatgcatggac 18204027  T

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Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 19444370 - 19444338
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  19444370 aaataggctcacagggcatcaagccctcaactt 19444338  T

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Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 23017134 - 23017098
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| |||||||||||||||||    
T  23017134 ggcatcaagccctcaacttaaatgagtatgcatggac 23017098  T

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Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 27323666 - 27323626
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  27323666 acagggcatcaaaccctcaacttaaatgagtatgcatggac 27323626  T

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Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 16133684 - 16133649
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  16133684 acagggcatcaagccctcaacttaaatgagtatgca 16133649  T

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Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 16448797 - 16448762
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||| |||||||||||||||||||||||||    
T  16448797 aaataggctcccagggcatcaagccctcaactttaa 16448762  T

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Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 17743109 - 17743148
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  17743109 cagggcatcaagccctcaacttaaatgggtatgcatggac 17743148  T

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Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 19362335 - 19362374
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  19362335 cagggcataaagcccccaactttaatgagtatgcatggac 19362374  T

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Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 19444294 - 19444259
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  19444294 acagggcatcaagccctcaacttaaatgagtatgca 19444259  T

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Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 2291534 - 2291500
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  2291534 aaataggctcccagggcatcaagccctcaacttta 2291500  T

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Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 8054837 - 8054871
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  8054837 aaataggctcccagggcatcaagccctcaacttta 8054871  T

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Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 18334946 - 18334912
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  18334946 aaataggctcccagggcatcaagccctcaacttta 18334912  T

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Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 19004854 - 19004888
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  19004854 aaataggctcccagggcatcaagccctcaacttta 19004888  T

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Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 23083288 - 23083243
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||||    
T  23083288 aggctcacagggcattaagccctcaac-tcaatgagtatgcatggac 23083243  T

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Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 24422355 - 24422389
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  24422355 aaataggctcccagggcatcaagccctcaacttta 24422389  T

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Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 33864086 - 33864120
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  33864086 aaataggctcccagggcatcaagccctcaacttta 33864120  T

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Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 18177888 - 18177847
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatg 61  Q
    |||||||||||||||| |||||||| | ||||||||||||||    
T  18177888 gctcacagggcatcaaaccctcaacataaatgagtatgcatg 18177847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 20411787 - 20411742
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||    
T  20411787 gctcacagagcatcaagccctcaacttcaaatgagtatgcatggac 20411742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 25688391 - 25688424
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttt 47  Q
    |||||||||| |||||||||||||||||||||||    
T  25688391 aaataggctcccagggcatcaagccctcaacttt 25688424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 25714309 - 25714342
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttt 47  Q
    |||||||||| |||||||||||||||||||||||    
T  25714309 aaataggctcccagggcatcaagccctcaacttt 25714342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 1595358 - 1595390
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  1595358 aaataggctctcagggcatcaagccctcaactt 1595390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 20557203 - 20557171
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  20557203 aaataggctcccagggcatcaagccctcaactt 20557171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 20734520 - 20734488
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  20734520 aaataggctcacagggcatcaaaccctcaactt 20734488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 23017214 - 23017182
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  23017214 aaataggctcacagggcatcaaaccctcaactt 23017182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 23017279 - 23017247
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  23017279 aaataggctcacagggcatcaaaccctcaactt 23017247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23538555 - 23538615
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||| |||||||  ||||| ||| ||||||||||||||||||  ||||||||||||||||    
T  23538555 caacttattgagcaaa--ggctc-cagtgcatcaagccctcaacttatatgagtatgcatggac 23538615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 27326843 - 27326811
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||| |||||    
T  27326843 aaataggctcacagggcatcaagcccttaactt 27326811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 27387583 - 27387551
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||| |||||    
T  27387583 aaataggctcacagggcatcaagcccttaactt 27387551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 30674405 - 30674357
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| ||||||||||| ||||||||| || ||||||||||| |||||||    
T  30674405 acagcgcatcaagcccccaactttaaggaatatgcatggactcagcaac 30674357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 18115 - 18180
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  18115 atagagcaaataggctcacagggcatcaagccctcaagtttaatgagtatgcatggactcagcaac 18180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 58; Significance: 2e-24; HSPs: 5)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 66003 - 65938
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  66003 atagagcaaataggctcacagagcatcaagccctcaactttaatgagtatgcatggactcagcaac 65938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 66090 - 66047
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  66090 caacatatagagcaaataggctcacagggcatcaagccctcaac 66047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 76046 - 76002
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||    
T  76046 gctcacagggcatcaagccctcaacttaaatcagtatgcatggac 76002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 66130 - 66087
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  66130 caacttatagagcaaataggctcacaaggcatcaagcccccaac 66087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 66050 - 66005
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| ||||||||||||| ||||| ||||||||||| |||||||||    
T  66050 caacgtatagagcaaataagctcagagggcatcaaggcctcaactt 66005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 109202 - 109263
Alignment:
Q  3 acttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  109202 acttatagagcaaataggctcacagggcatcaagccctcaacttaaatgagtatgcatggac 109263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 74587 - 74635
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| |||||||||||||||||||||||| ||||||| ||| |||||||    
T  74587 acagagcatcaagccctcaactttaatgattatgcattgactcagcaac 74635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 24720823 - 24720758
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  24720823 atagagcaaataggctcacagggcatcaaaccctcaactttaatgagtatgcatggactcagcaac 24720758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 21240257 - 21240194
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  21240257 caacttatagagcaaataggctcataggacatcaagccctcaactttaatgagtatgcatggac 21240194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 44891616 - 44891673
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44891616 atagagcaaataggctcacagggcatcaaaccctcaactttaatgagtatgcatggac 44891673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 13301816 - 13301879
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||    
T  13301816 caacttatagagcaaataggctcatagggcatcaaaccctcaacttaaatgagtatgcatggac 13301879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 14793454 - 14793387
Alignment:
Q  6 tatagagc-aaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||| ||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||||    
T  14793454 tatagagcgaaaaaggctcacaggtcatcaagcccccaactttaatgagtatgcatggactcagcaac 14793387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 17904071 - 17904013
Alignment:
Q  15 aataggctcacagggcatcaagccctcaacttta-atgagtatgcatggacccagcaac 72  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  17904071 aataagctcacagggcatcaagccctcaactttagatgagtatgcatggactcagcaac 17904013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17904117 - 17904072
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  17904117 caacttatagagcaaataggctcacagggcatcaaaccctcaactt 17904072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 18120609 - 18120657
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  18120609 acagggcatcaagccctcaactttaatgagtatgcaaggactcagcaac 18120657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 51476023 - 51476067
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  51476023 gctcacagggcatcaagccctcaacttaaatgagtatgcatggac 51476067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 24720864 - 24720825
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24720864 atagagcaaataggctcacagggcatcaagccctcaactt 24720825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42696710 - 42696753
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  42696710 caacttaaagagcaaataggctcacagggcatcaagccctcaac 42696753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45754446 - 45754489
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  45754446 caacttaaagagcaaataggctcacagggcatcaagccctcaac 45754489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 45754501 - 45754555
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||| ||| |||||||||||||||||| |||||||||||||||| |||||||    
T  45754501 aggctcataggacatcaagccctcaacttttatgagtatgcatggactcagcaac 45754555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44891569 - 44891614
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||    
T  44891569 caacgtatagagcaaataggctcacagggcatcaaaccctcaactt 44891614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 4596859 - 4596815
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  4596859 gctcacagggcatcaagccctcaacgtaaatgagtatgcatggac 4596815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 20241867 - 20241911
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  20241867 gctcacagggcatcaagccctcaacgtaaatgagtatgcatggac 20241911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 41227742 - 41227702
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  41227742 acagggcatcaagccctcaacttaaatgagtatgcatggac 41227702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 51323367 - 51323415
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| |||||||||||||||||||||||||||||||||||  |||||||    
T  51323367 acagagcatcaagccctcaactttaatgagtatgcatggattcagcaac 51323415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 23967625 - 23967664
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  23967625 cagggcatcaagccctcaacttaaatgagtatgcatggac 23967664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 42696765 - 42696811
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||    
T  42696765 aggctcacagggcatcaagccctcaacatatatgagtatgcatggac 42696811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13301776 - 13301821
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| |||||||| ||||||||||||||||||||||||| ||||||    
T  13301776 caacatatagagcgaataggctcacagggcatcaagcccccaactt 13301821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 21244872 - 21244823
Alignment:
Q  23 cacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||| |||||||||||||||||||||||| |||||||| || |||||||    
T  21244872 cacagagcatcaagccctcaactttaatgattatgcatgaactcagcaac 21244823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 22349643 - 22349688
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  22349643 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 22349688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 38057657 - 38057612
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  38057657 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 38057612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 7321943 - 7321895
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| ||||||| |||||||||||||||||||||||| ||| |||||||    
T  7321943 acagagcatcaaaccctcaactttaatgagtatgcatcgactcagcaac 7321895  T

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Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18120539 - 18120586
Alignment:
Q  1 caacttatagagca--aataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||  || |||||||||||||||||||||||||||||    
T  18120539 caacttatagagcacaaaaaggctcacagggcatcaagccctcaactt 18120586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 20587738 - 20587774
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| |||||||||||||||||    
T  20587738 ggcatcaagccctcaacttaaatgagtatgcatggac 20587774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 20592276 - 20592312
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| |||||||||||||||||    
T  20592276 ggcatcaagccctcaacttaaatgagtatgcatggac 20592312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 28477723 - 28477683
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||| ||||||||||||||||||||||| ||||    
T  28477723 acagggcatcaatccctcaactttaatgagtatgcaaggac 28477683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 29297946 - 29297978
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  29297946 aaataggctcacagggcatcaagccctcaactt 29297978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 35088521 - 35088561
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  35088521 acagagcatcaagccctcaacttaaatgagtatgcatggac 35088561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 42912088 - 42912132
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||    
T  42912088 gctcacagggcatcaagccctcaacgtaaatgagtacgcatggac 42912132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 45496035 - 45496083
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| ||||||| |||||||||||||||| ||||||||||| |||||||    
T  45496035 acagagcatcaaaccctcaactttaatgattatgcatggactcagcaac 45496083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 13528806 - 13528771
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  13528806 acagggcatcaagccctcaacttaaatgagtatgca 13528771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 20634620 - 20634585
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgcatg 61  Q
    ||||||||||||||||||||| ||||||||||||||    
T  20634620 agggcatcaagccctcaacttaaatgagtatgcatg 20634585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 21711598 - 21711633
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||| |||||||||||||||||||||||||    
T  21711598 aaataggctcccagggcatcaagccctcaactttaa 21711633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 22124194 - 22124233
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  22124194 cagggcatcaagcccccaacttaaatgagtatgcatggac 22124233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 24726369 - 24726416
Alignment:
Q  18 aggctcacagggcatcaagccctcaacttt-aatgagtatgcatggac 64  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||    
T  24726369 aggctcacatggcatcaagccctcaactttaaacgagtatgcatggac 24726416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 40389046 - 40389081
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||| |||||||||||||||||||||||||    
T  40389046 aaataggctcccagggcatcaagccctcaactttaa 40389081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 48520243 - 48520282
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  48520243 cagggcatcaagccctcaacttaaatgagcatgcatggac 48520282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7322012 - 7321966
Alignment:
Q  1 caacttatagagca-aataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||    
T  7322012 caacttatagagcataaaaggctcacagggcatcaagcccccaactt 7321966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 23594089 - 23594055
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  23594089 aaataggctcccagggcatcaagccctcaacttta 23594055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 35088403 - 35088433
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  35088403 aaataggctcacagggcatcaagccctcaac 35088433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 40389002 - 40389036
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  40389002 aaataggctcccagggcatcaagccctcaacttta 40389036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 51274585 - 51274551
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgca 59  Q
    |||||||||||||||||||||| ||||||||||||    
T  51274585 cagggcatcaagccctcaacttaaatgagtatgca 51274551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 8276997 - 8276952
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  ||||||||||| |||||    
T  8276997 gctcacagggcatcaagccctcaacttcaaatgagtatgcgtggac 8276952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24720937 - 24720892
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| ||||||||||||||||||||| | |||||||||| ||||||    
T  24720937 caacgtatagagcaaataggctcacatgacatcaagcccccaactt 24720892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 431567 - 431599
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  431567 aaataggctcccagggcatcaagccctcaactt 431599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 14238626 - 14238594
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||| ||||||||||||||||||    
T  14238626 aaataggctcacagagcatcaagccctcaactt 14238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 16059328 - 16059284
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||| ||||||| ||||||||| | |||||||||||||||||    
T  16059328 gctcacatggcatcatgccctcaacgtaaatgagtatgcatggac 16059284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 16381096 - 16381132
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||| | |||||||||||||||||    
T  16381096 ggcatcaagccctcaacataaatgagtatgcatggac 16381132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 19675789 - 19675833
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||| ||||| |||||||| | |||||||||||||||||    
T  19675789 gctcacagggaatcaaaccctcaacgtaaatgagtatgcatggac 19675833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 20587658 - 20587690
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||| |||||    
T  20587658 aaataggctcacagggcatcaagcccttaactt 20587690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 20592196 - 20592228
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||| |||||    
T  20592196 aaataggctcacagggcatcaagcccttaactt 20592228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 20634698 - 20634666
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||| |||||||||||||||||    
T  20634698 aaataggctcacaggacatcaagccctcaactt 20634666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 22123378 - 22123346
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  22123378 aaataggctcccagggcatcaagccctcaactt 22123346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 22123421 - 22123389
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  22123421 aaataggctcccagggcatcaagccctcaactt 22123389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 27161773 - 27161741
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  27161773 aaataggctcccagggcatcaagccctcaactt 27161741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 35088445 - 35088477
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  35088445 aaataggctcacagggcatcaaaccctcaactt 35088477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 39060180 - 39060208
Alignment:
Q  24 acagggcatcaagccctcaactttaatga 52  Q
    |||||||||||||||||||||||||||||    
T  39060180 acagggcatcaagccctcaactttaatga 39060208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 48300871 - 48300907
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  48300871 ggcatcaagccctaaacttaaatgagtatgcatggac 48300907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21045 - 20973
Alignment:
Q  1 caacttatagagca-aataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21045 caacttatagagcataaaaggctcacagggcatcaagccctcaactttaatgagtatgcatggactcagcaac 20973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 206 - 135
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||    
T  206 caacatatagagcaaataggctcacagtgcatcaaaccctcaactttaatgagtatgcatggactcagcaac 135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 61780 - 61845
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  61780 atagagcaaataggctcacagggcatcaagcccccaactttagtgagtatgcatggactcagcaac 61845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 61733 - 61778
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||    
T  61733 caacttatagagcaaataagctcacatggcatcaagccctcaactt 61778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 407 - 470
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  407 caacttatagagcaaataggctcacagggcatcaaacccctaactttaatgagtatgcatggac 470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 596 - 659
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  596 caacttatagagcaaataggctcacagggcatcaagcccccaactataatgagtgtgcatggac 659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0645 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0645
Description:

Target: scaffold0645; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 205 - 142
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  205 caacttatagagcaaataggctcacagggcatcaagccctacactttaatgagtatgcacggac 142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0645; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 172
Target Start/End: Complemental strand, 104 - 70
Alignment:
Q  138 agcgactttggaaataacttgcaacttaacgatat 172  Q
    ||||||||||| |||||||||||||||||||||||    
T  104 agcgactttggcaataacttgcaacttaacgatat 70  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2957 - 2894
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  2957 caacttaaagagcaaataggctcacatggcatcaagccctcaactttaatgagtatacatggac 2894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2997 - 2952
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||    
T  2997 caacttaaagagcaaataggctcacatggcatcaagccctcaactt 2952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18817 - 18754
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  18817 caacttatagagcaaataggctcacggggcatcaagccctcaacttcaatgactatgcatggac 18754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18899 - 18854
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||| |||||||||||||||||||||| |||||| ||||||    
T  18899 caacttataaagcaaataggctcacagggcattaagcccccaactt 18854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34313 - 34376
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  34313 caacatatagagcaaataggctcacagggcatcaagccttcaactttaatgactatgcatggac 34376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 187672 - 187609
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  187672 caacttatagagcaaataggctcacagggcatcaagcccccaactataatgagtgtgcatggac 187609  T

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Target: scaffold0037 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 113679 - 113616
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||    
T  113679 caactcatagagcaaataggctcaaagggcatcaagcccccaacttaaatgagtatgcatggac 113616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 113718 - 113675
Alignment:
Q  2 aacttatagagcaaataggctcacagggcatcaagccctcaact 45  Q
    ||||||||||| |||||||||||||||||||||| |||||||||    
T  113718 aacttatagagaaaataggctcacagggcatcaaaccctcaact 113675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 47; Significance: 6e-18; HSPs: 6)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 4576 - 4510
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaacttta-atgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||| |||||||    
T  4576 atagagcaaataggctcacagggcatcaagtcctcaactttagataagtatgcatggactcagcaac 4510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 9136 - 9070
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaacttta-atgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||| |||||||    
T  9136 atagagcaaataggctcacagggcatcaagtcctcaactttagataagtatgcatggactcagcaac 9070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4664 - 4619
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| |||| |||||||||||||||||| |||||||||||||||||    
T  4664 caacgtataaagcaaataggctcacaggacatcaagccctcaactt 4619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9224 - 9179
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| |||| |||||||||||||||||| |||||||||||||||||    
T  9224 caacgtataaagcaaataggctcacaggacatcaagccctcaactt 9179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 4617 - 4578
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  4617 atagagcaaataggctcacagggcatcaaacccttaactt 4578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 9177 - 9138
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  9177 atagagcaaataggctcacagggcatcaaacccttaactt 9138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 24209 - 24263
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  24209 aggctcacagggcatcaagccctcaacttaaatgagtatgcatggactcagcaac 24263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 47; Significance: 6e-18; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 39929 - 39995
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaacttta-atgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| |||||||    
T  39929 atagagcaaataggctcatagggcatcaagccctcaactttagatgaatatgcatggactcagcaac 39995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 38372 - 38325
Alignment:
Q  16 ataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  38372 ataggctc-cagggcatcaagcccccaactttaatgagtatgcatggac 38325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 125655 - 125715
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||| |||||||  ||||| ||||||||||||||| |||||| |||||||||||||||||    
T  125655 caacttattgagcaaa--ggctc-cagggcatcaagcccccaacttaaatgagtatgcatggac 125715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 39889 - 39927
Alignment:
Q  8 tagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  39889 tagagaaaataggctcacagggcatcaagccgtcaactt 39927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 19176 - 19240
Alignment:
Q  7 atagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||| |||||||    
T  19176 atagagcaaataggctcacagggcatcgaaccctcaac-ttaatgagtatgcatggactcagcaac 19240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19129 - 19174
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||    
T  19129 caacgtatagagcaaataggctcacagggcatcaaaccctcaactt 19174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 3296 - 3367
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||| ||||| |||||||||||||||||||||||||||||| |  |||||||||||| ||| |||||||    
T  3296 caacttaaagagcgaataggctcacagggcatcaagccctcaacatatatgagtatgcatagactcagcaac 3367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 3793 - 3839
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  3793 agggcatcaagccctcaactttaatgagtatgcatggactcagcaac 3839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3723 - 3769
Alignment:
Q  1 caacttatagagca-aataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  3723 caacttatagagcataataggctcacagggcatcaaaccctcaactt 3769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 4795 - 4749
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  4795 aggctcacagggcatcaagccctcaacttgaatgagtatgcatggac 4749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 14839 - 14797
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatgg 62  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  14839 gctcacagggcatcaagcactcaacttgaatgagtatgcatgg 14797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 9749 - 9795
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagca 70  Q
    |||| ||||||| |||||||||||||||| ||||||||||| |||||    
T  9749 acagagcatcaaaccctcaactttaatgattatgcatggactcagca 9795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 16941 - 16987
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagca 70  Q
    |||| ||||||| |||||||||||||||| ||||||||||| |||||    
T  16941 acagagcatcaaaccctcaactttaatgattatgcatggactcagca 16987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 127431 - 127370
Alignment:
Q  11 agcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||||||||||| |||||||| || |||| ||||||||||||||||| |||||||    
T  127431 agcaaataggctcacagggaatcaagccatctacttaaatgagtatgcatggactcagcaac 127370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 556 - 595
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  556 cagggcatcaagccctcaacttaaatgagtatgcatggac 595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 127482 - 127439
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||| |||| ||||| |||||||||||||||||||||||||    
T  127482 caacttaaagagaaaataagctcacagggcatcaagccctcaac 127439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 7482 - 7434
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  7482 acagggcatcaagccctcaactttaatgagtatgcaaggactcagcaac 7434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7552 - 7505
Alignment:
Q  1 caacttatagagcaaata--ggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||| | |  ||||||||||||||||||||||||||||    
T  7552 caacttatagagcacaaaagggctcacagggcatcaagccctcaactt 7505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 19155 - 19111
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  19155 gctcacagggcatcaagccctcaacttaaatgagtatgcatggac 19111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 25655 - 25703
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  25655 acagggcatgaagccctcaactttaatgagtatgcatggactcagcaac 25703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 391 - 340
Alignment:
Q  21 ctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  391 ctcacagggcaccaagccctcaattttaatgagtatgcatggactcagcaac 340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 5939 - 5982
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatgga 63  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  5939 gctcacagggcatcaagccctcaacttaaatgagtatgcatgga 5982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 11812 - 11761
Alignment:
Q  21 ctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||||| |||||||||| |||||| |||||||    
T  11812 ctcacagggcatcaagccctcaacttaaatgagtatgtatggactcagcaac 11761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11870 - 11827
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  11870 caacttaaagaacaaataggctcacagggcatcaagccctcaac 11827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 6)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 11715 - 11660
Alignment:
Q  18 aggctcacagggcatcaagccctcaacttta-atgagtatgcatggacccagcaac 72  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||    
T  11715 aggctcatagggcatcaagccctcaactttagatgagtatgcatggactcagcaac 11660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 944 - 897
Alignment:
Q  18 aggctcacagggcatcaagccctcaacttta-atgagtatgcatggac 64  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  944 aggctcacaaggcatcaagccctcaactttagatgagtatgcatggac 897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 999 - 956
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||| ||||| |||||||||||||||||||||||||    
T  999 caacttatagagaaaatacgctcacagggcatcaagccctcaac 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 6248 - 6201
Alignment:
Q  18 aggctcacagggcatcaagccctcaacttta-atgagtatgcatggac 64  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  6248 aggctcacaaggcatcaagccctcaactttagatgagtatgcatggac 6201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6303 - 6260
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||| ||||| |||||||||||||||||||||||||    
T  6303 caacttatagagaaaatacgctcacagggcatcaagccctcaac 6260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 11768 - 11726
Alignment:
Q  2 aacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  11768 aacttatagagaaaataggctcacagggcattaagccctcaac 11726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 28323 - 28370
Alignment:
Q  18 aggctcacagggcatcaagccctcaacttt-aatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  28323 aggctcacagggcatcaagccctcaactttaaatgagtatgcatggac 28370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 47587 - 47523
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    ||||||| |||| ||||  |||||||||||||||| ||||||||||  |||||||||||||||||    
T  47587 caacttaaagagaaaatgtgctcacagggcatcaatccctcaacttcaaatgagtatgcatggac 47523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 28276 - 28310
Alignment:
Q  9 agagcaaataggctcacagggcatcaagccctcaa 43  Q
    |||| ||||||||||||||||||||||||||||||    
T  28276 agagaaaataggctcacagggcatcaagccctcaa 28310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 136640 - 136577
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||| |||||||| | |||||||||||||||||  |||||||||||||||| |||||||||||    
T  136640 caactgatagagcataaaggctcacagggcatcacaccctcaactttaatgactatgcatggac 136577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 136717 - 136677
Alignment:
Q  6 tatagagcaaataggctcacagggcatcaagccctcaactt 46  Q
    |||||| ||||  ||||||||||||||||||||||||||||    
T  136717 tatagaacaaaagggctcacagggcatcaagccctcaactt 136677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 3502 - 3556
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  3502 aggcccacagggcatcaagccctcaaatttaatgactatgcatggactcagcaac 3556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 11213 - 11259
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  11213 aggctcacagggcatcaagccctcaacatgaatgagtatgcatggac 11259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 221425 - 221371
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||| |||||||||||||||||||||| |||||| |||||||||| |||||||    
T  221425 aggctcccagggcatcaagccctcaacttaaatgagcatgcatggactcagcaac 221371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 1434 - 1504
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaacttt-aatgagtatgcatggacccagcaac 72  Q
    |||| |||||||||||  ||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||    
T  1434 caacgtatagagcaaa--ggctcactgagcatcaagccctcaactttaaatgagtatgcatggactcagcaac 1504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4601 - 4663
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||| |||||||||||  ||||||||| ||||||||||||||||||  |||||||||||||||||    
T  4601 caacatatagagcaaa--ggctcacagagcatcaagccctcaacttgaaatgagtatgcatggac 4663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 56034 - 56083
Alignment:
Q  1 caacttatagagc-aaataggctcacagggcatcaagccctcaactttaa 49  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  56034 caacttatagagcgaaaaaggctcacagggcatcaagccctcaactttaa 56083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 56106 - 56149
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||| ||||||||||| |||||||    
T  56106 gcatcaagccctcaactttaatgattatgcatggactcagcaac 56149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 4029 - 3976
Alignment:
Q  19 ggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||| |||||||    
T  4029 ggctcatagggcatcaagccctcatctttaatgggtatgcatggactcagcaac 3976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 421 - 373
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  421 acagggcatcaagcccccaactttaatgattatgcatggactcagcaac 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 37; Significance: 0.000000000006; HSPs: 5)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 16656 - 16704
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||||    
T  16656 acagggcatcaagccctcaacttatatgagtatgcatggactcagcaac 16704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 2811 - 2843
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  2811 aaataggctcacagggcatcaagccctcaactt 2843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16587 - 16633
Alignment:
Q  1 caacttatagagca-aataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||| || |||||||||||||||||||| ||||||||    
T  16587 caacttatagagcataaaaggctcacagggcatcaagctctcaactt 16633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11362 - 11313
Alignment:
Q  1 caacttatagagcaaata-ggctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||||||||| | |||||||| |||||||||||| |||||||||    
T  11362 caacttatagagcaaaaaaggctcacatggcatcaagcccccaactttaa 11313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 11290 - 11246
Alignment:
Q  29 gcatcaagccctcaacttta-atgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||| | |||||||||||||||| |||||||    
T  11290 gcatcaagccctcaacttaatatgagtatgcatggactcagcaac 11246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 10875 - 10919
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  10875 gctcacagggcatcaagccctcaacgtaaatgagtatgcatggac 10919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 1891 - 1939
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  1891 acagggcatcaagcccccaactttaatgattatgcatggactcagcaac 1939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 37; Significance: 0.000000000006; HSPs: 7)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 19815 - 19771
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  19815 gctcacagggcatcaagccctcaacgtaaatgagtatgcatggac 19771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 7242 - 7274
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  7242 aaataggctcacagggcatcaagccctcaactt 7274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 7340 - 7380
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  7340 acagggcatcaaaccctcaacttgaatgagtatgcatggac 7380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 14361 - 14393
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  14361 aaataggctcacagggcatcaagccctcaactt 14393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 14426 - 14458
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  14426 aaataggctcacagggcatcaagccctcaactt 14458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 14459 - 14499
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  14459 acagggcatcaaaccctcaacttgaatgagtatgcatggac 14499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 46
Target Start/End: Original strand, 7309 - 7339
Alignment:
Q  16 ataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||    
T  7309 ataggctcacagggcatcaagccctcaactt 7339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 22140 - 22184
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatgg 62  Q
    |||||||||||||||||||||| |||||| |||||||||||||||    
T  22140 aggctcacagggcatcaagcccccaacttaaatgagtatgcatgg 22184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 102110 - 102066
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  102110 gctcacagggcatcaagccctcaacgtaaatgagtatgcatggac 102066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 11040 - 11087
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggacc 65  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||||||    
T  11040 aggctgacagggcatcaagcccccaacttaaatgagtatgcatggacc 11087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 78358 - 78318
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  78358 acagggcatcaagccctcaacttaaatgagtatgcatggac 78318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 78434 - 78402
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  78434 aaataggctcacagggcatcaagccctcaactt 78402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 78476 - 78446
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  78476 aaataggctcacagggcatcaagccctcaac 78446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 7657 - 7613
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||| |||||||||||||||| |||||||||||||||||    
T  7657 gctcacagggtatcaagccctcaacttgaatgagtatgcatggac 7613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 1609 - 1648
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  1609 cagggcatcaagcccccaactttaatgagtatgcatggac 1648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 15501 - 15462
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  15501 cagggcatcaagccctcaacttaaatgagtatgcatggac 15462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 15985 - 16028
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||||||||||||||||||||||| ||||||||||| |||||||    
T  15985 gcatcaagccctcaactttaatgattatgcatggactcagcaac 16028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 60218 - 60253
Alignment:
Q  9 agagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  60218 agagcaaataggctcacagggcatcaagccctcaac 60253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 60303 - 60349
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||    
T  60303 aggctcacatggcatcaagccctcaacttatatgagtatgcatggac 60349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 17129 - 17090
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  17129 cagggcatcaagcccccaactttaatgagtatgcatggac 17090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 26241 - 26202
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  26241 cagggcatcaagcccccaactttaatgagtatgcatggac 26202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 95340 - 95375
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  95340 gcatcaagccctcaactttaatgagtatgcatggac 95375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 942 - 996
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||| ||||||||||  ||||||||| ||||||||||||||||| |||||||    
T  942 aggctcatagggcatcaaaacctcaacttgaatgagtatgcatggactcagcaac 996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 36090 - 36128
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  36090 agggcatcaagccctcaacttaaatgagtatgcatggac 36128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 10635 - 10599
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||| |||||| |||||||||||||||||    
T  10635 ggcatcaagcccccaacttaaatgagtatgcatggac 10599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 8063 - 8105
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcat 60  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  8063 aggctcccagggcatcaagccctcaacttaaatgagtatgcat 8105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 610 - 654
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||| ||||||||||||| ||||| | |||||||||||||||||    
T  610 gctcatagggcatcaagccttcaacgtaaatgagtatgcatggac 654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 552 - 597
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  552 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 847 - 886
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  847 cagggcatcaagcccccaacttaaatgagtatgcatggac 886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 6675 - 6638
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatg 61  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  6675 acagggcatcaagccctcaacttaaatgagtatgcatg 6638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 6770 - 6740
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  6770 aaataggctcacagggcatcaagccctcaac 6740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 39161 - 39206
Alignment:
Q  20 gctcacagggcatcaagccctcaacttt-aatgagtatgcatggac 64  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||    
T  39161 gctcacatggcatcaagccctcaactttaaatgagtatgcatggac 39206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 14121 - 14166
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  14121 gctcacagggcatcaagccctcaacttcaaatgagtatgcatggac 14166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 33388 - 33420
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  33388 aaataggctcacagggcatcaagccctcaactt 33420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 54916 - 54961
Alignment:
Q  20 gctcacagggcatcaagccctcaacttt-aatgagtatgcatggac 64  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||    
T  54916 gctcacagagcatcaagccctcaactttaaatgagtatgcatggac 54961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 246 - 278
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  246 aaataggctcacagggcatcaagccctcaactt 278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 322 - 357
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  322 acagggcatcaagccctcaacttaaatgagtatgca 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 182 - 214
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  182 aaataggctcacagggcatcaaaccctcaactt 214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 2884 - 2844
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  2884 acagggcatcaaaccctcaacttaaatgagtatgcatggac 2844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 7456 - 7500
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||| |||| | |||||||||||||||||    
T  7456 gctcacagggcatcaagcccccaacatgaatgagtatgcatggac 7500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 9346 - 9310
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| |||||||||||||||||    
T  9346 ggcatcaagccctcaacttaaatgagtatgcatggac 9310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 9426 - 9394
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  9426 aaataggctcacagggcatcaagccctcaactt 9394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 16974 - 16926
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    |||| |||||||||||||||||||||||| ||||||| ||| |||||||    
T  16974 acagagcatcaagccctcaactttaatgattatgcattgactcagcaac 16926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 725 - 693
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  725 aaataggctcacagggcatcaagccctcaactt 693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 57728 - 57760
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  57728 aaataggctcacagggcatcaagccctcaactt 57760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 57804 - 57844
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  57804 acagggcatcaagcccttaacttaaatgagtatgcatggac 57844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 78014 - 78046
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||||||||||||||    
T  78014 aaataggctcacagggcatcaagccctcaactt 78046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 78090 - 78130
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||| ||||||||||||| |||||| ||||||||||    
T  78090 acagggcattaagccctcaacttaaatgaggatgcatggac 78130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 63173 - 63137
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||||| |||||||||||||||||    
T  63173 ggcatcaagccctcaacttaaatgagtatgcatggac 63137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 497337 - 497373
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||| ||||||||||||||||||||||||    
T  497337 ggcatcaagcccccaactttaatgagtatgcatggac 497373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 76755 - 76792
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatg 61  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  76755 acagagcatcaagccctcaacttaaatgagtatgcatg 76792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 446388 - 446432
Alignment:
Q  18 aggctcacagggcatcaagccctcaactttaatgagtatgcatgga 63  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||    
T  446388 aggctcatagggcatcaagccctcaac-tcaatgagtatgcatgga 446432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 76679 - 76711
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||| |||||||||||||||||||||||||||    
T  76679 aaatatgctcacagggcatcaagccctcaactt 76711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 18375 - 18340
Alignment:
Q  29 gcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||| |||||||||||||||||    
T  18375 gcatcaagccctcaacttaaatgagtatgcatggac 18340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17400 - 17443
Alignment:
Q  1 caacttatagagcaaataggctcacagggcatcaagccctcaac 44  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||    
T  17400 caacttaaagagaaaataggctcacagggcatcaaaccctcaac 17443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 12993 - 13037
Alignment:
Q  21 ctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||    
T  12993 ctcacagggcatcaagctctcaacttcaaatgagtatgcatggac 13037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 1551 - 1516
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||| |||||||||||||||||||||||||    
T  1551 aaataggctcccagggcatcaagccctcaactttaa 1516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 57726 - 57765
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  57726 cagggcattaagcccccaactttaatgagtatgcatggac 57765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 142490 - 142529
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  142490 cagggcatcaagcccccaacttaaatgagtatgcatggac 142529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 1367 - 1397
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  1367 aaataggctcacagggcatcaagccctcaac 1397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 9800 - 9766
Alignment:
Q  30 catcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||||||| |||||||||||||||||    
T  9800 catcaagccctcaacttaaatgagtatgcatggac 9766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 9882 - 9850
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  9882 aaataggctcacagggcatcaaaccctcaactt 9850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 13755 - 13717
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  13755 agggcatcaagcccccaacttaaatgagtatgcatggac 13717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 8798 - 8836
Alignment:
Q  25 cagggcatcaagccctcaactttaatgagtatgcatgga 63  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  8798 cagggcatcaaacccccaactttaatgagtatgcatgga 8836  T

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Target: scaffold0293 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 17413 - 17451
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  17413 agggcatcaagcccccaacttaaatgagtatgcatggac 17451  T

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Target: scaffold0254 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 20555 - 20589
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  20555 aaataggctcccagggcatcaagccctcaacttta 20589  T

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Target: scaffold0142 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 16629 - 16663
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  16629 aaataggctcccagggcatcaagccctcaacttta 16663  T

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Target: scaffold0142; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 16673 - 16707
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  16673 aaataggctcccagggcatcaagccctcaacttta 16707  T

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Target: scaffold0106 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 19858 - 19824
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgcat 60  Q
    |||||||||||||| ||||||||||||||||||||    
T  19858 agggcatcaagcccccaactttaatgagtatgcat 19824  T

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Target: scaffold0106; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 15505 - 15473
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  15505 aaataggctcccagggcatcaagccctcaactt 15473  T

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Target: scaffold0090 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 17332 - 17362
Alignment:
Q  34 aagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||||||||||||||||    
T  17332 aagccctcaactttaatgagtatgcatggac 17362  T

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Target: scaffold0061 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 19543 - 19513
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  19543 aaataggctcacagggcatcaagccctcaac 19513  T

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Target: scaffold0051 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 65149 - 65103
Alignment:
Q  1 caacttatagagc-aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||    
T  65149 caacttatagagcgaaaaaggctcacagggcatcaagcccccaactt 65103  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 145738 - 145768
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaac 44  Q
    |||||||||||||||||||||||||||||||    
T  145738 aaataggctcacagggcatcaagccctcaac 145768  T

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Target: scaffold0023 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 94219 - 94253
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  94219 aaataggctcccagggcatcaagccctcaacttta 94253  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 116274 - 116308
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  116274 aaataggctcccagggcatcaagccctcaacttta 116308  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 30146 - 30180
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaacttta 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  30146 aaataggctcccagggcatcaagccctcaacttta 30180  T

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Target: scaffold0328 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 19649 - 19604
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||    
T  19649 gctcacagagcatcaagccctcaacttcaaatgagtatgcatggac 19604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 9089 - 9044
Alignment:
Q  18 aggctcacagggcatcaagccctcaactt-taatgagtatgcatgg 62  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||    
T  9089 aggctcacagggcatcaagcactcaacttcaaatgagtatgcatgg 9044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 2570 - 2623
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggacccagcaac 72  Q
    |||||||| ||||||||||||||||||  ||||| ||||||||||| |||||||    
T  2570 gctcacagagcatcaagccctcaacttcaaatgaatatgcatggactcagcaac 2623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 59
Target Start/End: Complemental strand, 41235 - 41202
Alignment:
Q  26 agggcatcaagccctcaactttaatgagtatgca 59  Q
    ||||||||||||||||||||| ||||||||||||    
T  41235 agggcatcaagccctcaacttaaatgagtatgca 41202  T

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Target: scaffold0117; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 41313 - 41281
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  41313 aaataggctcacagggcatcaaaccctcaactt 41281  T

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Target: scaffold0039 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 10905 - 10860
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||    
T  10905 gctcacagagcatcaagccctcaacttcaaatgagtatgcatggac 10860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 397541 - 397586
Alignment:
Q  20 gctcacagggcatcaagccctcaactt-taatgagtatgcatggac 64  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||    
T  397541 gctcacagggcatcaaaccctcaacttcaaatgagtatgcatggac 397586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 435 - 391
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||| |||||||||||| | |||||||||| ||||||    
T  435 gctcacagggcaccaagccctcaacgtaaatgagtatgaatggac 391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 6411 - 6443
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  6411 aaataggctcccagggcatcaagccctcaactt 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 10810 - 10842
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  10810 aaataggctcacagggcatcaaaccctcaactt 10842  T

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Target: scaffold0529 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 7406 - 7442
Alignment:
Q  29 gcatcaagccctcaacttt-aatgagtatgcatggac 64  Q
    ||||||||||||||||||| |||||||||||||||||    
T  7406 gcatcaagccctcaactttaaatgagtatgcatggac 7442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 7878 - 7926
Alignment:
Q  2 aacttatagagc-aaataggctcacagggcatcaagccctcaactttaa 49  Q
    |||||||||||| ||| |||||||||||||||||| ||| |||||||||    
T  7878 aacttatagagcgaaaaaggctcacagggcatcaaacccccaactttaa 7926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 15361 - 15405
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||| |||||| |||| | |||||||||||||||||    
T  15361 gctcacagggcatgaagcccccaacatgaatgagtatgcatggac 15405  T

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Target: scaffold0331 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 13122 - 13079
Alignment:
Q  20 gctcacagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||||||| |||||| | |||||||||||||||||    
T  13122 gctcacagggcatcaagctctcaac-tcaatgagtatgcatggac 13079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 13753 - 13789
Alignment:
Q  12 gcaaataggctcacagggcatcaagccctcaacttta 48  Q
    ||||||||||||  |||||||||||||||||||||||    
T  13753 gcaaataggctcctagggcatcaagccctcaacttta 13789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 9600 - 9632
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||| ||||||||||||||||||||||    
T  9600 aaataggctcccagggcatcaagccctcaactt 9632  T

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Target: scaffold0134 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 10274 - 10234
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||||| || ||||| |||||||||||||||||    
T  10274 acagggcatcaagctcttaacttaaatgagtatgcatggac 10234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 991 - 959
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    |||||||||||||||||||||| ||||||||||    
T  991 aaataggctcacagggcatcaaaccctcaactt 959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 27607 - 27563
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggacccagcaac 72  Q
    ||||||||| || |||||||||||| ||||||||||| |||||||    
T  27607 ggcatcaagaccccaactttaatgattatgcatggactcagcaac 27563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 59601 - 59561
Alignment:
Q  24 acagggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    ||||||||||||| |||||| || |||||||||||||||||    
T  59601 acagggcatcaagtcctcaaattaaatgagtatgcatggac 59561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 59677 - 59645
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||||||||| |||||||||||||    
T  59677 aaataggctcacagggcataaagccctcaactt 59645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 14118 - 14150
Alignment:
Q  14 aaataggctcacagggcatcaagccctcaactt 46  Q
    ||||||||||||| |||||||||||||||||||    
T  14118 aaataggctcacatggcatcaagccctcaactt 14150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 49083 - 49119
Alignment:
Q  28 ggcatcaagccctcaactttaatgagtatgcatggac 64  Q
    |||||||||||| |||||||||||| |||||||||||    
T  49083 ggcatcaagcccccaactttaatgattatgcatggac 49119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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