View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0881_low_56 (Length: 247)
Name: NF0881_low_56
Description: NF0881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0881_low_56 |
 | |
|
| [»] scaffold1043 (1 HSPs) |
| | |
|
| [»] scaffold0079 (1 HSPs) |
| | |
|
| [»] scaffold0688 (1 HSPs) |
| | |
|
| [»] scaffold0097 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 10825713 - 10825919
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10825713 |
gcctaatcacaatcaaccctactgcctagcatgcctcggccccctgcgccgcctggcaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
10825812 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10825813 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctgaccacaatatcatcagctatatgcaccacatcccggatgatcgtcagtgtgtcag |
10825912 |
T |
|
| Q |
225 |
gcatctc |
231 |
Q |
| |
|
||||||| |
|
|
| T |
10825913 |
gcatctc |
10825919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 25 - 235
Target Start/End: Complemental strand, 7263060 - 7262849
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccc-tgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccg |
123 |
Q |
| |
|
|||| ||||| ||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
7263060 |
gccttatcataatcaaccctgctgcctagcatgcctcggcccccctgcgccgcctggtaatctgatacgtaagggaagggcgaccagtaccggctatccg |
7262961 |
T |
|
| Q |
124 |
catcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtca |
223 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
7262960 |
catcacctcctggacaatatcctctttagtcatcttggcttgcctgaccacaatatcgtcagctatatgcaccacatctcggatgatcgtcggtgtgtta |
7262861 |
T |
|
| Q |
224 |
ggcatctctctg |
235 |
Q |
| |
|
|||||||||||| |
|
|
| T |
7262860 |
ggcatctctctg |
7262849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 25 - 231
Target Start/End: Complemental strand, 19876704 - 19876498
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
|||||||||| || ||||||||||| |||||||||||| ||| ||| || |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19876704 |
gcctaatcataattaaccctactgcgtagcatgcctcgcccctctgcgctgcctggcaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
19876605 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19876604 |
atcacctcctagacaatctcctctttagtcatctcgacttgcctggccacaatatcatcagctatatgcaccacatcccggatgatcgttagtgtgtcag |
19876505 |
T |
|
| Q |
225 |
gcatctc |
231 |
Q |
| |
|
||||||| |
|
|
| T |
19876504 |
gcatctc |
19876498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 37980260 - 37980465
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
||||||| || |||| |||| ||| ||| | |||||| | ||||| ||||||||| ||||||||| |||||||||||||||| ||||| | ||||| || |
|
|
| T |
37980260 |
gcctaataataatcagccctgctgtctaccctgcctctgacccctacgccgcctggcaatctgataagtaagggcagggcgactagtactg-ctatcagc |
37980358 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
37980359 |
atcacctcgtggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagcaatatgcaccacatcccggatgatcgtcagtgtgtcag |
37980458 |
T |
|
| Q |
225 |
gcatctc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
37980459 |
acatctc |
37980465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 25 - 159
Target Start/End: Complemental strand, 23067301 - 23067167
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
|||||||||| |||||| ||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
23067301 |
gcctaatcataatcaactctattgcctagcttgcctcggccccctgcgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatcccc |
23067202 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctc |
159 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
23067201 |
atcacctcctggacaatctcctctttagtcatctc |
23067167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 24169627 - 24169462
Alignment:
| Q |
66 |
ccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttg |
165 |
Q |
| |
|
||||| |||||||| ||||||||| ||||||||| |||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
24169627 |
ccctgcgccgcctgacaatctgataattaagggcagtacgactagtactagctatccgcatcacctcctggacaatctcctttttagtcatctcggcttg |
24169528 |
T |
|
| Q |
166 |
cctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
231 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
24169527 |
cctggccacaatatcgtcagcaatatgcaccacatcttggatgatcgtcagtgtgtcaggcatctc |
24169462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 41269982 - 41269773
Alignment:
| Q |
26 |
cctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
125 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41269982 |
cctaatcataatcaaccctgctgcctagcatgccttggccccctgcgccgcctggcaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
41269883 |
T |
|
| Q |
126 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
225 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
41269882 |
tcacctcttggacaatctcctctttagtcatctcggtttgcctggccacaatatcatcagctatatgcaccacatcccggatgatcgtcagtgtgtcagg |
41269783 |
T |
|
| Q |
226 |
catctctctg |
235 |
Q |
| |
|
|||||||||| |
|
|
| T |
41269782 |
catctctctg |
41269773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 44115918 - 44116124
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| || |||||||| ||| ||| | ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
44115918 |
gcctaatcacaatcaaccctactgcctagcatgcatcagccccctgcgccacctagcaatctgatacgtaagggcagggcgaccggtaccggctatccgc |
44116017 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
44116018 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcatcagctatatgcaccacatcctagatgatcgtcagtgtgtcag |
44116117 |
T |
|
| Q |
225 |
gcatctc |
231 |
Q |
| |
|
|| |||| |
|
|
| T |
44116118 |
gcgtctc |
44116124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 27 - 235
Target Start/End: Original strand, 42095767 - 42095975
Alignment:
| Q |
27 |
ctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcat |
126 |
Q |
| |
|
|||||||| || |||| | ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
42095767 |
ctaatcataatgaaccttgctgcctagcatgcctcggccccctgcgccgcctggcaatctgatacgtaagggcagggcgaccaataccgactatccgcat |
42095866 |
T |
|
| Q |
127 |
cacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggc |
226 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||||| | ||||||| | |
|
|
| T |
42095867 |
cacctcctggacaatctcctctttagtcatctcggcttgcctagccacaatatcatcaaatatatgcaccacatctcggatgatcgtcagcgtgtcagac |
42095966 |
T |
|
| Q |
227 |
atctctctg |
235 |
Q |
| |
|
|| |||||| |
|
|
| T |
42095967 |
atttctctg |
42095975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 8317040 - 8317246
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
||||||||| ||||||||| || ||||||||| ||| ||| | || ||||||||| ||||||||| |||||||||||||||| |||| ||||||||| |
|
|
| T |
8317040 |
gcctaatcacaatcaaccctgctacctagcatgtctctgcctcatgcgccgcctggcaatctgataagtaagggcagggcgactagtagtagctatccgc |
8317139 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
8317140 |
atcacctcctggacaatctcctatttagtgatctcggtttgcttggccacaatatcgtcagcaatatgcaccacatcccggatgatcgtcagtgtgtcaa |
8317239 |
T |
|
| Q |
225 |
gcatctc |
231 |
Q |
| |
|
||||||| |
|
|
| T |
8317240 |
gcatctc |
8317246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 56 - 231
Target Start/End: Original strand, 20477648 - 20477823
Alignment:
| Q |
56 |
tgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtca |
155 |
Q |
| |
|
|||||| |||||||| ||||||| | ||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
20477648 |
tgcctctgccccctgcgccgcctcgcaatatgataagtaagggcagggcgactagtactagctatccgcatcacctcctggacgatctcctctttagtca |
20477747 |
T |
|
| Q |
156 |
tctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
231 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
20477748 |
tctcggcatgcctggccacaatatcatcagcaatatgcaccacatcccatatgatcgtcagtgtgtcaggcatctc |
20477823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 235
Target Start/End: Original strand, 18701180 - 18701379
Alignment:
| Q |
36 |
atcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctg |
135 |
Q |
| |
|
|||| |||||||| ||| ||||||| |||||||| | |||||| ||||||||||||||||||||||||||| |||| | | ||||| |||||||||| |
|
|
| T |
18701180 |
atcagccctactgtctacgatgcctctgccccctgcgatgcctggcaatctgatacgtaagggcagggcgaccggtactgccaatccgaatcacctccta |
18701279 |
T |
|
| Q |
136 |
gacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctctctg |
235 |
Q |
| |
|
||| | |||||||||||||||| | | ||| | |||||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
18701280 |
aacagtatcctctttagtcatcttgccgctcctagacacaatattatcagctatctgcaccacatccctaatgatcgtcagtgtgtcaggcatctctctg |
18701379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 171; Significance: 6e-92; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 25 - 231
Target Start/End: Complemental strand, 31387652 - 31387446
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
31387652 |
gcctaatcacaatcaaccctgctgcctagcatgcctcggccccctgcgccgcctggcaatctgatacgtaagggcagggcgaccagtaccggctatccac |
31387553 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
31387552 |
atcacctcctggacagtctcctctttagtcatctcggcttgcctggccacaatatcatcagctatatgcaccacatcccggatgatcgtcagtgtgtcag |
31387453 |
T |
|
| Q |
225 |
gcatctc |
231 |
Q |
| |
|
||||||| |
|
|
| T |
31387452 |
gcatctc |
31387446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 15291587 - 15291793
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
15291587 |
gcctaatcataatcaaccttactgcctagcatgcctcggccctctgcgccgcctggcaatctgatacgtaagggcaggacgaccaataccggctatccgt |
15291686 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15291687 |
atcacctcctggacaatctcctatttagtcatctcggcttgcctgaccacaatatcatcagctatatgcaccacatcccggatgatcgtcagtgtgtcag |
15291786 |
T |
|
| Q |
225 |
gcatctc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
15291787 |
acatctc |
15291793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 27106024 - 27106230
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
||||||||| ||||||| | |||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
27106024 |
gcctaatcacaatcaaccatgctgcctagcatgcctcggccccctacgccgcctgacaatctgatacataagggcagggcgaccagtaccggctatccgc |
27106123 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
27106124 |
atcacctcctggaaaatctcctctttagtcatctcggcttgcctgaccacaatatcatcagctatatgcaccatatcccggatgatcgtcagtgtgtcag |
27106223 |
T |
|
| Q |
225 |
gcatctc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
27106224 |
acatctc |
27106230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 25 - 230
Target Start/End: Original strand, 4911934 - 4912139
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
||||||||| ||||||| | |||||||| ||||||| |||||||| ||||||||| ||||||||| ||||||||||||||||| ||||||||| |||| |
|
|
| T |
4911934 |
gcctaatcacaatcaaccatgctgcctagtatgcctcagccccctgcgccgcctggcaatctgatatataagggcagggcgaccaataccggctacccgc |
4912033 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4912034 |
atcacctcctggacaatcttctctttagtcatctcggcttgcctggccacaatatcatcggttatatgcaccacatcccggatgatcgtcagtgtgtcag |
4912133 |
T |
|
| Q |
225 |
gcatct |
230 |
Q |
| |
|
|||||| |
|
|
| T |
4912134 |
gcatct |
4912139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 48 - 231
Target Start/End: Original strand, 42463644 - 42463827
Alignment:
| Q |
48 |
gcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctc |
147 |
Q |
| |
|
||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42463644 |
gcctagcatgcctcggctccctgcgccgcctgacaatctaatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctc |
42463743 |
T |
|
| Q |
148 |
tttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
231 |
Q |
| |
|
|||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
42463744 |
gttagtcatctcggctttcctgaccacaatatcatcagctatatgcaccacatcccggatgatcgttagtgtgtcagacatctc |
42463827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 27 - 231
Target Start/End: Original strand, 46192293 - 46192497
Alignment:
| Q |
27 |
ctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcat |
126 |
Q |
| |
|
|||||||| ||||| | | |||||||| ||||||||||||||| | |||||| |||||||||| |||||| |||||||| |||||||| ||||||||| |
|
|
| T |
46192293 |
ctaatcataatcaaacgtgctgcctagaatgcctcggccccctacgtcgcctgacaatctgatacataaggggagggcgactagtaccggttatccgcat |
46192392 |
T |
|
| Q |
127 |
cacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggc |
226 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
46192393 |
cacctccaggacaatctcctctttagtcatctcggcttgcctggccacaatatcatcaactatatgcaccacatcccggatgatcgtgagtgtgtcagac |
46192492 |
T |
|
| Q |
227 |
atctc |
231 |
Q |
| |
|
||||| |
|
|
| T |
46192493 |
atctc |
46192497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 231
Target Start/End: Complemental strand, 18243077 - 18242871
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
||||||| || |||| |||| ||||||| | |||||| |||||||| ||||||||| ||||||||| |||||||||||||||| ||||| | |||| | |
|
|
| T |
18243077 |
gcctaataataatcagccctgctgcctaccctgcctctgccccctgcgccgcctggcaatctgataagtaagggcagggcgactagtactagatatctgt |
18242978 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||| ||||||||| |
|
|
| T |
18242977 |
atcacctcctagacgatctcctctttagtcatatcggcttgcctggccacaatatcgtcagcaatatgcaccagatccgggatgatcgtcagtgtgtcag |
18242878 |
T |
|
| Q |
225 |
gcatctc |
231 |
Q |
| |
|
||||||| |
|
|
| T |
18242877 |
gcatctc |
18242871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 82 - 231
Target Start/End: Original strand, 42055805 - 42055954
Alignment:
| Q |
82 |
aatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcg |
181 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||| |
|
|
| T |
42055805 |
aatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcagctttcttggccacaatatca |
42055904 |
T |
|
| Q |
182 |
tcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
231 |
Q |
| |
|
|| |||||||||| |||||| ||||||||||| |||||||||||||||| |
|
|
| T |
42055905 |
ccaactatatgcacaacatcctggatgatcgtcagtgtgtcaggcatctc |
42055954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 25 - 231
Target Start/End: Complemental strand, 50915002 - 50914796
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
||||||| || |||| |||| ||||||| | | |||| | |||||| |||||||| ||| ||||| |||||||||||||| | ||||| ||||||||| |
|
|
| T |
50915002 |
gcctaataataatcagccctgctgcctaccctacctctggcccctgcgccgcctgacaatttgataagtaagggcagggcggctagtactagctatccgc |
50914903 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| ||||||||| || ||||||||| |
|
|
| T |
50914902 |
atcacctcctggacgatctcctctttagtcgtctcggcttgcctggccacaatatcgtcaacaatatgcaccacatctcggatgatcctcagtgtgtcag |
50914803 |
T |
|
| Q |
225 |
gcatctc |
231 |
Q |
| |
|
||||||| |
|
|
| T |
50914802 |
gcatctc |
50914796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 166; Significance: 6e-89; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 26 - 231
Target Start/End: Original strand, 46526416 - 46526621
Alignment:
| Q |
26 |
cctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
125 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
46526416 |
cctaatcataatcaaccctgctgcctagcatgcctcggccccctgcgccgcctggcaatctgatacgtaagggcagggcgactagtaccggctatccgca |
46526515 |
T |
|
| Q |
126 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
225 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
46526516 |
tcacctactggacaatctcctctttagtcatctcggcttgcctagccacaatatcgccaactatatgcaccacatcccggatgatcgtcagtgtgtcagg |
46526615 |
T |
|
| Q |
226 |
catctc |
231 |
Q |
| |
|
|||||| |
|
|
| T |
46526616 |
catctc |
46526621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 28 - 230
Target Start/End: Original strand, 6272856 - 6273058
Alignment:
| Q |
28 |
taatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatc |
127 |
Q |
| |
|
||||||| ||||| | ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
6272856 |
taatcataatcaatcttactgcctagcatgcctcggccccctgcgccgcctggaaatctgatacgtaagggcagggtgaccagtaccggctatccgcatc |
6272955 |
T |
|
| Q |
128 |
acctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggca |
227 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
6272956 |
acctcctggacaatctcctctttagtcatctcgtcttgcctggccacaatatcgtcaactatatgcaccacatcccagatgatcgttaatgtgtcaggca |
6273055 |
T |
|
| Q |
228 |
tct |
230 |
Q |
| |
|
||| |
|
|
| T |
6273056 |
tct |
6273058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 42014258 - 42014049
Alignment:
| Q |
26 |
cctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
125 |
Q |
| |
|
||||||||| |||||| || ||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
42014258 |
cctaatcataatcaactctgctgcctagcatgcctcggccccctgctccgcctagcaatctgatacgtaagggtagggcgaccagtaccggctacccgca |
42014159 |
T |
|
| Q |
126 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
225 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
42014158 |
tcacctcctggaaaatcttctctttagtcatctcggcttgcctggccacaatatcatcagctatatgcaccacatctcggatgatcgtcaatgtgtcagg |
42014059 |
T |
|
| Q |
226 |
catctctctg |
235 |
Q |
| |
|
|||||||||| |
|
|
| T |
42014058 |
catctctctg |
42014049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 28 - 223
Target Start/End: Complemental strand, 41964451 - 41964256
Alignment:
| Q |
28 |
taatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatc |
127 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| ||||||| | || |||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41964451 |
taatcataatcaaccctactgcctagcatgcctcgaccccctgcgtcgtctggcaatctgatacgtaagggcagggcgaccagtaccggctatccgcatc |
41964352 |
T |
|
| Q |
128 |
acctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtca |
223 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| |||||| |||||||||||||||||||||| || ||||| |
|
|
| T |
41964351 |
acctcctggaaaatctcctctttagtcatctcggcttgcctgaccacaatatcatcaactatattcaccacatcccggatgatcgtcagtctgtca |
41964256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 56 - 231
Target Start/End: Complemental strand, 10554701 - 10554526
Alignment:
| Q |
56 |
tgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtca |
155 |
Q |
| |
|
|||||| | |||||| | ||||||| ||| ||||| |||||||||||||||| ||||| |||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
10554701 |
tgcctctggcccctgcgtcgcctggcaatttgataagtaagggcagggcgactagtactagctatctacatcacctcctggataatctcctctttagtca |
10554602 |
T |
|
| Q |
156 |
tctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
231 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10554601 |
tctcggcttgcctggccacaatatcgtcaccaatatgcaccacatcccggatgatcgtcaatgtgtcaggcatctc |
10554526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 31593903 - 31593737
Alignment:
| Q |
65 |
cccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggctt |
164 |
Q |
| |
|
|||||| ||||||||| ||||||||| |||||||||||||||| ||||| ||||||||||||| |||| ||| ||||||||||||||||||||||||| |
|
|
| T |
31593903 |
cccctgcgccgcctggaaatctgataagtaagggcagggcgactagtactagctatccgcatcaaatcctagacgatctcctctttagtcatctcggctt |
31593804 |
T |
|
| Q |
165 |
gcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
231 |
Q |
| |
|
| || ||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
31593803 |
ggctagccacaatatcgtcagcaatttgcaccacatcccggatgatcgtcagtgtgtcaggcatctc |
31593737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 45075571 - 45075710
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccc-tgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccg |
123 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||| ||||| | ||||||||| |||||||||||||||| | || || |||||||||||||||| |
|
|
| T |
45075571 |
gcctaatcataatcaaccctgttgcctagcatgcctcgccccccctacgccgcctggcaatctgatacgtaaggatatggtgatcagtaccggctatccg |
45075670 |
T |
|
| Q |
124 |
catcacctcctggacaatctcctctttagtcatctcggct |
163 |
Q |
| |
|
||||||||| |||| ||||||||||||| | ||||||||| |
|
|
| T |
45075671 |
catcacctcttggataatctcctctttatttatctcggct |
45075710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 225
Target Start/End: Complemental strand, 3939995 - 3939852
Alignment:
| Q |
82 |
aatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcg |
181 |
Q |
| |
|
|||||||||| |||||| |||||||||||||| | | ||||| |||| |||||| || | |||||||||||| |||||||| | ||||||||| || |
|
|
| T |
3939995 |
aatctgatacataagggtagggcgaccagtactgccaatccggatcatctcctgcaccagctcctctttagttatctcggcgctcatggccacaacatta |
3939896 |
T |
|
| Q |
182 |
tcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
225 |
Q |
| |
|
||| |||| ||||| ||||||| ||||||||| |||||||||| |
|
|
| T |
3939895 |
tcaactatctgcacgacatccctaatgatcgtcagtgtgtcagg |
3939852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 11405161 - 11405241
Alignment:
| Q |
33 |
atgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtac |
113 |
Q |
| |
|
|||||||||||| ||||||| |||||| |||||||| || | |||| || |||||| ||||||||||||||||||||| |
|
|
| T |
11405161 |
atgatcaaccctgctgcctacgatgcctatgccccctgcgctgtctggccatttgatacataagggcagggcgaccagtac |
11405241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 166; Significance: 6e-89; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 27 - 232
Target Start/End: Original strand, 177823 - 178028
Alignment:
| Q |
27 |
ctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcat |
126 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
177823 |
ctaatcataatcaaccctgttgcctagcatgcctcggccccctatgccgcctggcaatctgatacgtaagggcagggcgaccagtaccggctatccgcat |
177922 |
T |
|
| Q |
127 |
cacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggc |
226 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||| ||||||||||| |
|
|
| T |
177923 |
cacctcctggacaatcttctctttagtcatctcggcttgcctggccacaatatcatcagctatatgcaccacatctcagatgatcgtcagtgtgtcaggc |
178022 |
T |
|
| Q |
227 |
atctct |
232 |
Q |
| |
|
|||||| |
|
|
| T |
178023 |
atctct |
178028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 36 - 231
Target Start/End: Complemental strand, 52561201 - 52561006
Alignment:
| Q |
36 |
atcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctg |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52561201 |
atcaaccctactgcctagcatgcctcggccccctgcgccgcctgacaatctgttacgtaagggcagggcgaccagtaccggctatccgcatcacctcctg |
52561102 |
T |
|
| Q |
136 |
gacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||| |
|
|
| T |
52561101 |
gacaatctcctctttagtcatctcggcttgcctggccacaatatcatcagctatatgcaccacatcccggatgattgtcagtgtgtcagacatctc |
52561006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 18942999 - 18943208
Alignment:
| Q |
26 |
cctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
125 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||| ||||||| |||||| | ||| |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
18942999 |
cctaatcataatcaaccctgctgcctagcatgcctcgaccccctgcaccgcctcgcaatttgatacgtaagggcagggcgaccagtaccggctatccgta |
18943098 |
T |
|
| Q |
126 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||| || |||||||| | |
|
|
| T |
18943099 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcaggtatatgcaccacatacaggatgatcatcagtgtgtcaag |
18943198 |
T |
|
| Q |
226 |
catctctctg |
235 |
Q |
| |
|
|||||||||| |
|
|
| T |
18943199 |
catctctctg |
18943208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 48164928 - 48164719
Alignment:
| Q |
26 |
cctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
125 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48164928 |
cctaatcataatcaaccctgctgcctagcatgcctcgaccccctgcgccgcctgacaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
48164829 |
T |
|
| Q |
126 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
225 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
48164828 |
tcacctcctggacaatatcctctttagtcatctcggctttcctggtcacaatatcatcagttatatgcaccacatctcggatgatcgtcagtgtgtcaaa |
48164729 |
T |
|
| Q |
226 |
catctctctg |
235 |
Q |
| |
|
|||||||||| |
|
|
| T |
48164728 |
catctctctg |
48164719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 26 - 230
Target Start/End: Complemental strand, 45034795 - 45034591
Alignment:
| Q |
26 |
cctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
125 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| |||||| ||||||||| |||||||| |
|
|
| T |
45034795 |
cctaatcataatcaaccctgctgcctagcatgcctcggccccctgcgccgcctggcaatttgatacgtaagggcggggcgatcagtaccggatatccgca |
45034696 |
T |
|
| Q |
126 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
225 |
Q |
| |
|
|||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||| | |||||||||| |
|
|
| T |
45034695 |
tcacctcctggacaatcttttcattagtcatctcagcttgcctggccacaatatcatcagctatatgcaccacctcccggatgatcgccagtgtgtcagg |
45034596 |
T |
|
| Q |
226 |
catct |
230 |
Q |
| |
|
||||| |
|
|
| T |
45034595 |
catct |
45034591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 18908242 - 18908113
Alignment:
| Q |
106 |
accagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccgg |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
18908242 |
accagtaccggctatccgcatcacctcctggacaatctcctctttaggcatttcggcttgcctggccacagtatcgtcagctatatgcaccacatcccag |
18908143 |
T |
|
| Q |
206 |
atgatcgtcggtgtgtcaggcatctctctg |
235 |
Q |
| |
|
|||||| || |||||||||||||||||||| |
|
|
| T |
18908142 |
atgatcatcagtgtgtcaggcatctctctg |
18908113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 55150938 - 55150760
Alignment:
| Q |
46 |
ctgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcc |
145 |
Q |
| |
|
||||||| | |||||| |||||||| ||||||||| ||||||||| |||||||||||||||| ||||| | ||||||||||||||||| ||| |||||| |
|
|
| T |
55150938 |
ctgcctaccctgcctctgccccctgcgccgcctggcaatctgataagtaagggcagggcgactagtactagttatccgcatcacctcctagacgatctcc |
55150839 |
T |
|
| Q |
146 |
tctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
||||||||| |||||||||||||| ||| |||||||||||| |||||||||||||| ||||||||| || ||||||||| |
|
|
| T |
55150838 |
tctttagtcctctcggcttgcctgaccataatatcgtcagcaatatgcaccacatctcggatgatcatcagtgtgtcag |
55150760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 9220 - 9108
Alignment:
| Q |
116 |
gctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcg |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
9220 |
gctatccgcatcacctcctggacaatctcctttctactcatctcggcttgcctggccacaatatcatcagcaatatgcaccacatcccggatgatcgtca |
9121 |
T |
|
| Q |
216 |
gtgtgtcaggcat |
228 |
Q |
| |
|
|||||||||||| |
|
|
| T |
9120 |
ctgtgtcaggcat |
9108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 234
Target Start/End: Original strand, 13825446 - 13825654
Alignment:
| Q |
26 |
cctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
125 |
Q |
| |
|
|||||| || ||||||||||||||||| ||||| |||||||| || |||||| |||| ||||| ||||||||||||||| ||||| | |||| | |
|
|
| T |
13825446 |
cctaatgataatcaaccctactgcctatggtgcctatgccccctgcgctgcctggcaatccgatacataagggcagggcgactagtactatcaatccaaa |
13825545 |
T |
|
| Q |
126 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
225 |
Q |
| |
|
||| |||||| || | |||| |||||||||||||||| | | ||||||| || |||||||| ||||| ||||||| ||||||||| |||||||||| |
|
|
| T |
13825546 |
tcatctcctgcaccagctccgctttagtcatctcggcactcatagccacaacattatcagctatctgcacgacatccctgatgatcgtaagtgtgtcagg |
13825645 |
T |
|
| Q |
226 |
catctctct |
234 |
Q |
| |
|
||||||||| |
|
|
| T |
13825646 |
catctctct |
13825654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 18911965 - 18911880
Alignment:
| Q |
26 |
cctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagt |
111 |
Q |
| |
|
||||||||| ||||||| | ||||||||||||| | ||||||||| ||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
18911965 |
cctaatcataatcaaccttgctgcctagcatgctttggccccctgcgccgcctggcaatctgatatgtaagggcagggcgaccagt |
18911880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 235
Target Start/End: Original strand, 54315312 - 54315492
Alignment:
| Q |
55 |
atgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtc |
154 |
Q |
| |
|
||||||| |||| ||| || |||||| || ||||||||||||||||||||||||| || | | |||| ||| ||| || | |||||||| | ||||| |
|
|
| T |
54315312 |
atgcctctgccctctgcgctgcctggcaaactgatacgtaagggcagggcgaccaatattgtcaatcctaatcgccttctaaataatctcctatgtagtc |
54315411 |
T |
|
| Q |
155 |
atctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctctctg |
235 |
Q |
| |
|
|||| | | |||||||||||||| ||| |||| ||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
54315412 |
atcttgccgctcctggccacaatattatcatctatctgcaccacatccctgatgatcgtcaatgtgtcaggcatctctctg |
54315492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 10902 - 10817
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccag |
110 |
Q |
| |
|
||||||| || |||| |||| ||||||| | |||||| |||||||| |||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
10902 |
gcctaataataatcagccctgctgcctaccctgcctctgccccctgcgccgcctgacaatctgataagtaagggcagggcgaccag |
10817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 25 - 235
Target Start/End: Original strand, 31501135 - 31501345
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
31501135 |
gcctaatcacaatcaaccctgctgcctagcatgcctcggccccctgcgtcgcctgaaaatctgatacgtaagggcaaggcgaccagtaccggctatccac |
31501234 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || |||||| |
|
|
| T |
31501235 |
atcacctcctggacaatatcctctttagtcatctcggcttgcctggccacaatatcatcagctatatgcaccacatcccggataatcgtcagtttgtcag |
31501334 |
T |
|
| Q |
225 |
gcatctctctg |
235 |
Q |
| |
|
||||||||||| |
|
|
| T |
31501335 |
gcatctctctg |
31501345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 36 - 228
Target Start/End: Complemental strand, 4174888 - 4174696
Alignment:
| Q |
36 |
atcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctg |
135 |
Q |
| |
|
||||||||||||||||||||| ||||| ||| | | ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4174888 |
atcaaccctactgcctagcatacctcgacccacagcgccgcttggcaatctgatacgtaacggcagggcgaccagtaccggctatccgcatcacctcctg |
4174789 |
T |
|
| Q |
136 |
gacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcat |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
4174788 |
gacaatctcctctttagtcatctcggcttgtctggccacaatatcatcagctatatgcaccacatcccggatgatcgtcagtgtgttaggcat |
4174696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 25 - 235
Target Start/End: Original strand, 40612850 - 40613060
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
|||||||||| ||||||||| ||||||| |||||||| |||||||| ||| |||| ||||||||||||| ||||||||||| |||||||||| |||||| |
|
|
| T |
40612850 |
gcctaatcataatcaaccctgctgcctaccatgcctctgccccctgcgccacctgacaatctgatacgtacgggcagggcgatcagtaccggccatccgc |
40612949 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
40612950 |
atcacctcctagacaatctcctctttagtcatctcggcttgcttggccacaatatcattagctatatgaaccacatcccggatgatcgtcagtgtgtcag |
40613049 |
T |
|
| Q |
225 |
gcatctctctg |
235 |
Q |
| |
|
||||||||||| |
|
|
| T |
40613050 |
gcatctctctg |
40613060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 197
Target Start/End: Complemental strand, 26393874 - 26393702
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
|||||||||| ||||||||| ||| ||||||||||||||||||||| | |||| |||||||||||||||||||||||||| |||||||| |||||||| | |
|
|
| T |
26393874 |
gcctaatcataatcaaccctgctgactagcatgcctcggccccctgcgtcgccgggtaatctgatacgtaagggcagggcaaccagtactggctatccac |
26393775 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcacca |
197 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
26393774 |
atcacctcctggacaatctcctctttagtcatctcggattgcctggccacaatatcgtcagctatatgcacca |
26393702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 2777249 - 2777064
Alignment:
| Q |
46 |
ctgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcc |
145 |
Q |
| |
|
||||||| | |||||| |||||||| ||||||||| ||||||||| ||||||| ||||| || ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
2777249 |
ctgcctaccctgcctctgccccctgcgccgcctggaaatctgataagtaaggggagggccactagtactagctatccgcatcacctcctggacaatctcc |
2777150 |
T |
|
| Q |
146 |
tctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
2777149 |
tctttagtcatctcggcttgcctggccacaatatcgtcaacaatatgcatcacatcccggatgatcgtcaatgtgtcaggcatctc |
2777064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 34458617 - 34458432
Alignment:
| Q |
46 |
ctgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcc |
145 |
Q |
| |
|
||||||| ||||| | |||||||| ||||||||| ||||||||| |||||||||||| |||| ||||| |||||| | |||||||||||||||||| || |
|
|
| T |
34458617 |
ctgcctaccatgcatatgccccctgcgccgcctggcaatctgatatgtaagggcagggagaccggtacctgctatctgtatcacctcctggacaatcacc |
34458518 |
T |
|
| Q |
146 |
tctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
34458517 |
tctttaatcatctcggcttgcctggccacaatatcatcagctatatgcaccacatcccgaatgatcgtcagtgtgtcaggcatctc |
34458432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 56 - 231
Target Start/End: Original strand, 2119882 - 2120057
Alignment:
| Q |
56 |
tgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtca |
155 |
Q |
| |
|
|||||| |||||||| |||||||| ||||||||| ||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2119882 |
tgcctctgccccctgcgccgcctgaaaatctgataagtaagggcaacgcgactagtactagctatccgcatcacctcctggacaatctcctctttagtca |
2119981 |
T |
|
| Q |
156 |
tctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
231 |
Q |
| |
|
|||||||||| |||||||||||| | ||| ||||||||||| |||| |||||||||||| |||||||||||||||| |
|
|
| T |
2119982 |
tctcggcttgtctggccacaataccatcaactatatgcaccccatctcggatgatcgtcagtgtgtcaggcatctc |
2120057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 19508633 - 19508503
Alignment:
| Q |
26 |
cctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
125 |
Q |
| |
|
||||||||| |||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||||| || | |||||||||||||||||||||| |
|
|
| T |
19508633 |
cctaatcataatcaacactgctgcctagcatgccttggccccctgtgccgcctggcaatctgatacgtaaggacatg-cgaccagtaccggctatccgca |
19508535 |
T |
|
| Q |
126 |
tcacctcctggacaatctcctctttagtcatc |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
19508534 |
tcacctcctggacaatctcctctttagtcatc |
19508503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 29902373 - 29902164
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
||||||||| ||||||||| ||||||| ||| ||| ||||||| || |||||| |||| ||| ||||||||||||||||||||| | | ||||| |
|
|
| T |
29902373 |
gcctaatcaaaatcaaccctgctgcctacgatgtctctgccccctacgctgcctggaaatccaatatgtaagggcagggcgaccagtagtgccaatccga |
29902274 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||| | |||| ||||||||| |||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
29902273 |
atcacctcctgaaatatctcctctttagtcatctcgccactcctgaccacaatattatcagctatctgcaccacatcccggatgatcgtcagtgtgtcga |
29902174 |
T |
|
| Q |
225 |
gcatctctct |
234 |
Q |
| |
|
|||||||||| |
|
|
| T |
29902173 |
gcatctctct |
29902164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 235
Target Start/End: Original strand, 15738225 - 15738424
Alignment:
| Q |
36 |
atcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctg |
135 |
Q |
| |
|
|||| |||||||| ||| ||||||| |||||||| | |||||| ||||||||||||||||||||||||||| |||| | | ||||| |||||||||| |
|
|
| T |
15738225 |
atcagccctactgtctacgatgcctctgccccctgcgatgcctggcaatctgatacgtaagggcagggcgaccggtactgccaatccgaatcacctccta |
15738324 |
T |
|
| Q |
136 |
gacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctctctg |
235 |
Q |
| |
|
||| | |||||||||||||||| | | ||| | |||||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
15738325 |
aacagtatcctctttagtcatcttgccgctcctagacacaatattatcagctatctgcaccacatccctaatgatcgtcagtgtgtcaggcatctctctg |
15738424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 694860 - 694944
Alignment:
| Q |
147 |
ctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
231 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
694860 |
ctttagtcatctcggcttgcctagccacaatatcatcagttatatgcaccacatcccggatgatcgtcagtgtgtcaggcatctc |
694944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 21833606 - 21833397
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
||||||| || |||||| || ||||||| ||||||| |||||||| | ||||| ||| |||| |||||||||||||||||||||| | ||||| |
|
|
| T |
21833606 |
gcctaatgataatcaactctgctgcctacgatgcctctgccccctgagatgcctgacaattcgatatgtaagggcagggcgaccagtactaccaatccgg |
21833507 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
|||| |||||| |||| |||||||||||||||||| | ||| ||||||||| || ||||| | ||||| ||||||| |||||| ||| |||||||| |
|
|
| T |
21833506 |
atcatctcctgcacaagctcctctttagtcatctcttcctgcatggccacaacattatcagccacctgcacgacatccctgatgattgtcaatgtgtcag |
21833407 |
T |
|
| Q |
225 |
gcatctctct |
234 |
Q |
| |
|
| |||||||| |
|
|
| T |
21833406 |
ggatctctct |
21833397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 162
Target Start/End: Complemental strand, 20725611 - 20725488
Alignment:
| Q |
39 |
aaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggac |
138 |
Q |
| |
|
|||||| ||||||| |||||| ||||||||||| || || |||||||||| ||||||||||||||||||||| | | ||||| |||| |||||| || |
|
|
| T |
20725611 |
aaccctgctgcctacgatgcctatgccccctgtgctgcatgacaatctgatacataagggcagggcgaccagtactgccaatccggatcatctcctgcac |
20725512 |
T |
|
| Q |
139 |
aatctcctctttagtcatctcggc |
162 |
Q |
| |
|
| ||||||||||||||||||||| |
|
|
| T |
20725511 |
gagctcctctttagtcatctcggc |
20725488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 26172783 - 26172682
Alignment:
| Q |
75 |
gcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccac |
174 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||| | | ||||| || | |||||| || | |||| ||||||||||||| || ||| ||||||| |
|
|
| T |
26172783 |
gcctggcaatctaatacgtaagggcagggcgaccagtactgccaatccggataatctcctgcaccagctccgctttagtcatctctgcctgcatggccac |
26172684 |
T |
|
| Q |
175 |
aa |
176 |
Q |
| |
|
|| |
|
|
| T |
26172683 |
aa |
26172682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 26172681 - 26172642
Alignment:
| Q |
196 |
cacatcccggatgatcgtcggtgtgtcaggcatctctctg |
235 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
26172681 |
cacatccctgatgatcgtcagtgtgtcaggcatctctctg |
26172642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 26391596 - 26391556
Alignment:
| Q |
195 |
ccacatcccggatgatcgtcggtgtgtcaggcatctctctg |
235 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
26391596 |
ccacatctcggatgatcgttagtgtgtcaggcatctctctg |
26391556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 36 - 235
Target Start/End: Original strand, 54602559 - 54602758
Alignment:
| Q |
36 |
atcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctg |
135 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||| | ||| ||||||||||||| |
|
|
| T |
54602559 |
atcaaccctgctgcctagcatgcctcggccccctgcgccgcctggcaatctaatacgtaagggcagggcgaccagtaccaacaatctgcatcacctcctg |
54602658 |
T |
|
| Q |
136 |
gacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctctctg |
235 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
54602659 |
gacaatttcctctttagtcatctcggcttgcctaaccacaatatcgtcagctatatgcaccacatcccggatgatcgtcagtgtgtcaggcatctctctg |
54602758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 53 - 235
Target Start/End: Original strand, 12024911 - 12025093
Alignment:
| Q |
53 |
gcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttag |
152 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
12024911 |
gcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccgggtatccgcatcacctcctggacaatctcctctttag |
12025010 |
T |
|
| Q |
153 |
tcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctctctg |
235 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| || ||||| ||| |||||||||| |
|
|
| T |
12025011 |
tcatctcggctttcctggccacaatatcgtcatctatatgcaccacatctcggatgatcatcagtgtgccagacatctctctg |
12025093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 39388810 - 39389008
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
39388810 |
gcctaatcataatcaaccctactgcctagcatgccttagccccctacgccacctggcaatctgatacgtaaggtcagggcgaccagtaccggctatccgc |
39388909 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtca |
223 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||| |||| |||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
39388910 |
atcacctcctgaacaatctcctctttagtcatcccggcttgcctgaccacaatatcatcagttatatgtaccacatcccggatgatcgtcagtgtgtca |
39389008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 75 - 235
Target Start/End: Original strand, 16347123 - 16347283
Alignment:
| Q |
75 |
gcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccac |
174 |
Q |
| |
|
|||||| |||| |||| ||||||||| ||||||||||| | | |||| ||||||||||| |||||||||||||||||||||||| | ||||||||| |
|
|
| T |
16347123 |
gcctggcaatccgatatgtaagggcaaggcgaccagtagtgccaatccaaatcacctcctgaacaatctcctctttagtcatctcgccgctcctggccac |
16347222 |
T |
|
| Q |
175 |
aatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctctctg |
235 |
Q |
| |
|
|||||| |||||||| ||||||| || ||||||||||||| ||||||||| |||||||||| |
|
|
| T |
16347223 |
aatatcatcagctatctgcaccatattccggatgatcgtcagtgtgtcagacatctctctg |
16347283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 151; Significance: 5e-80; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 25 - 235
Target Start/End: Complemental strand, 5620442 - 5620232
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
5620442 |
gcctaatcataatcaaccctgctgcctagcatgcctcggctccctgcgccgcctggcaatctgatacgtaagggcagggcgactagtatcggctatccgc |
5620343 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||| || ||||||||| |
|
|
| T |
5620342 |
atcacctcctggacaatctcttctttagtcatctcggcttgtctgtccacaatatcgtcaactatatgcaccacatctcggatgatcatcagtgtgtcag |
5620243 |
T |
|
| Q |
225 |
gcatctctctg |
235 |
Q |
| |
|
|||| |||||| |
|
|
| T |
5620242 |
gcatatctctg |
5620232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 25 - 245
Target Start/End: Complemental strand, 33523559 - 33523337
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
|||||||||| ||||||||||||| ||| | |||| | |||||||| ||||||| | ||||||||| |||||||||||||| ||||||| |||||| || |
|
|
| T |
33523559 |
gcctaatcataatcaaccctactgtctaccctgccgctgccccctgcgccgcctagcaatctgatatgtaagggcagggcggccagtactggctattcgt |
33523460 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
33523459 |
atcacctcctggacaatctcctccttagtcatctcgtctttcctggccacaatatcatcagttatatgcaccacatcccggatgatcgtcagtgtgtcag |
33523360 |
T |
|
| Q |
225 |
gcatctctctg--tgctcctcct |
245 |
Q |
| |
|
|||||||||| |||||||||| |
|
|
| T |
33523359 |
acatctctctgcatgctcctcct |
33523337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 19268753 - 19268951
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
||||||||| ||||||||| ||||||| |||||||| |||||||| ||||||||| ||||||||||||| |||||||||||||||||| ||||||| | |
|
|
| T |
19268753 |
gcctaatcagaatcaaccctgctgcctaccatgcctctgccccctgcgccgcctggcaatctgatacgtatgggcagggcgaccagtactggctatctga |
19268852 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtca |
223 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||| | | ||| ||||||||||| |||||||||||||||||||| | |||||||||| |||||||| |
|
|
| T |
19268853 |
atcacctcttggacaatctcctctttaatcatctcgtcgttccttgccacaatatcatcagctatatgcaccacatctcagatgatcgtcagtgtgtca |
19268951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 2946241 - 2946153
Alignment:
| Q |
143 |
tcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
2946241 |
tcctctttagtcatctcggcttgcctggccacaatatcatcaactatatgcaccacatcccggatgattgtcagtgtgtcaggcatctc |
2946153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 33522380 - 33522523
Alignment:
| Q |
92 |
gtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatat |
191 |
Q |
| |
|
||||||||| |||||| ||||||| |||| ||||| |||||||||| |||||||| ||||||| ||||| | ||||| |||||||| |||||||||| |
|
|
| T |
33522380 |
gtaagggcaaggcgactagtaccgactattcgcataacctcctggaaaatctcctttttagtcccgtcggcctttctggcaacaatatcatcagctatat |
33522479 |
T |
|
| Q |
192 |
gcaccacatcccggatgatcgtcggtgtgtcaggcatctctctg |
235 |
Q |
| |
|
|||||||||| ||||||||| || |||||||| ||| |||||| |
|
|
| T |
33522480 |
gcaccacatctcggatgatcttcaatgtgtcagacatatctctg |
33522523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 36 - 211
Target Start/End: Complemental strand, 23058817 - 23058639
Alignment:
| Q |
36 |
atcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcag---ggcgaccagtaccggctatccgcatcacctc |
132 |
Q |
| |
|
||||||||| ||||||| ||||||| ||| |||| || ||||| |||| ||||||||||||||| ||||||||||| | | ||||| | |||||| |
|
|
| T |
23058817 |
atcaaccctgctgcctacgatgcctctgccacctgcgctacctggaaatccgatacgtaagggcagcagggcgaccagtagtgccaatccgaaacacctc |
23058718 |
T |
|
| Q |
133 |
ctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatc |
211 |
Q |
| |
|
|| ||||||||||||||||||||||| | | ||||||||||||| |||||||| ||||||||||| ||||||||| |
|
|
| T |
23058717 |
atgaacaatctcctctttagtcatctcaccgctcatggccacaatatcatcagctatctgcaccacatctcggatgatc |
23058639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1043 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold1043
Description:
Target: scaffold1043; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 25 - 235
Target Start/End: Original strand, 2965 - 3175
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
|||||||||| ||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2965 |
gcctaatcataatcaaccctgttgcctagcacgcctcggccccctgcgccgcctggcaatctgatacgtaagggcagggcgaccagtaccggatatccgc |
3064 |
T |
|
| Q |
125 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
224 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| | ||||| ||| ||||||||| |
|
|
| T |
3065 |
atcacctcctggacaatctcctctttagtcatctcggtttgcctggctacaatatcatcagctatatgcaccacatctcagatgaccgttagtgtgtcag |
3164 |
T |
|
| Q |
225 |
gcatctctctg |
235 |
Q |
| |
|
|||||||||| |
|
|
| T |
3165 |
acatctctctg |
3175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0079 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0079
Description:
Target: scaffold0079; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 75 - 235
Target Start/End: Complemental strand, 45738 - 45578
Alignment:
| Q |
75 |
gcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccac |
174 |
Q |
| |
|
|||||| |||| |||| ||||||||| ||||||||||| | | |||| ||||||||||| |||||||||||||||||||||||| | ||||||||| |
|
|
| T |
45738 |
gcctggcaatccgatatgtaagggcaaggcgaccagtagtgccaatccaaatcacctcctgaacaatctcctctttagtcatctcgccgctcctggccac |
45639 |
T |
|
| Q |
175 |
aatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctctctg |
235 |
Q |
| |
|
|||||| |||||||| ||||||| || ||||||||||||| ||||||||| |||||||||| |
|
|
| T |
45638 |
aatatcatcagctatctgcaccatattccggatgatcgtcagtgtgtcagacatctctctg |
45578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0688 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0688
Description:
Target: scaffold0688; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 5552 - 5433
Alignment:
| Q |
25 |
gcctaatcatgatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
124 |
Q |
| |
|
||||||| || |||| |||| ||||||| | |||||| |||||||| ||||||| | ||||| ||| |||||||||||||||| ||||| ||||||||| |
|
|
| T |
5552 |
gcctaataataatcagccctgctgcctaccttgcctctgccccctgcgccgcctagcaatctaataagtaagggcagggcgactagtactagctatccgc |
5453 |
T |
|
| Q |
125 |
atcacctcctggacaatctc |
144 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
5452 |
atcacctcctggacgatctc |
5433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0097 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0097
Description:
Target: scaffold0097; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 162
Target Start/End: Complemental strand, 29440 - 29317
Alignment:
| Q |
39 |
aaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggac |
138 |
Q |
| |
|
|||||| ||||||| |||||| ||||||||||| || || |||||||||| ||||||||||||||||||||| | | ||||| |||| |||||| || |
|
|
| T |
29440 |
aaccctgctgcctacgatgcctatgccccctgtgctgcatgacaatctgatacataagggcagggcgaccagtactgccaatccggatcatctcctgcac |
29341 |
T |
|
| Q |
139 |
aatctcctctttagtcatctcggc |
162 |
Q |
| |
|
| ||||||||||||||||||||| |
|
|
| T |
29340 |
gagctcctctttagtcatctcggc |
29317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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