View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0881_low_8 (Length: 446)
Name: NF0881_low_8
Description: NF0881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0881_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 422; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 1 - 442
Target Start/End: Original strand, 25302065 - 25302506
Alignment:
| Q |
1 |
tcatcactgctaaaccctatgtattacagaaggaaaaccaaaccaccttaaatttcccatgattcattcacccttggttttccctttgagcatccttatc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
25302065 |
tcatcactgctaaaccctatgtattacagaaggaaaaccaaaccaccttaaatttcccatgattcattcacccttggttttccctctgagcatccttatc |
25302164 |
T |
|
| Q |
101 |
aaaacccaaagacctaaccttgagctgaagctcagcaacagcaacaaaaaagttgagaacctgagctggtttcagtatctgcacaactctcaaagctgtc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
25302165 |
aaaacccaaagacctaaccttgagctgaagctcagcaacagcaacaaaaaagttgagaacctgagctggtttcagtatctgcacaactctcaaagctgtc |
25302264 |
T |
|
| Q |
201 |
tcagtcctcaaagcatcagcatttgtcaccaaattctccaatgtttccttgaatgaactagaaactgtaccctcttctgccatgaatgacctactcaaac |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25302265 |
tcagtcctcaaagcatcagcatttgtcaccaaattctccaatgtttccttgaatgaactagaaactgtaccctcttctgccatgaatgacctactcaaac |
25302364 |
T |
|
| Q |
301 |
acactcttccatggcttctaacattgtcaagaaccggtggcgccgccatactctcatgaaccttagccaattcatcattgagttctctctccttcatctt |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
25302365 |
acactcttccatggcttctaacattgtcaagaaccggtggcgccgccatactctcatgaaccttagccaattcatcatttagttctctctccttcatctt |
25302464 |
T |
|
| Q |
401 |
agtctcttgtttgagctcactcaacctctgtctctgctcctc |
442 |
Q |
| |
|
| |||||||||||||||||||||||||||| ||||| ||||| |
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|
| T |
25302465 |
aatctcttgtttgagctcactcaacctctgcctctgatcctc |
25302506 |
T |
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