View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0882_low_17 (Length: 278)
Name: NF0882_low_17
Description: NF0882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0882_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 100 - 258
Target Start/End: Complemental strand, 28613596 - 28613438
Alignment:
| Q |
100 |
tcaacatcaaacatgccaaaaatgtcacaaacacaatttatgacagaaacttgcaagctgcagtgagttaaagtgaagacaagatatgtctcaaatgttg |
199 |
Q |
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| T |
28613596 |
tcaacatcaaacatgccaaaaatgtcacaaacacaatttatgacagaaacttgcaagctgaagtgagttaaagtgaagacaagatatgtctcaaatgttg |
28613497 |
T |
|
| Q |
200 |
tagtagtttcttactttcttgtcttttcgccgttttcactgtacctttgcttcttctct |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
28613496 |
tagtagtttcttactttcttgtcttttcgccgttttcactgtacctttgcttctactct |
28613438 |
T |
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