View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0883_high_11 (Length: 294)
Name: NF0883_high_11
Description: NF0883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0883_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 47835177 - 47835463
Alignment:
| Q |
1 |
tcatcactgctctacacactgccacaccttgtcttgttttgggccatgccaatacattaacaattaccctattctctcttgctctannnnnnnctttcat |
100 |
Q |
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|
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||| |
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| T |
47835177 |
tcatcactgctctaaacactgccacaccttgtcttgttttgggccatgtcaatagattaacaattaccctattctctcttgctctctttttttctttcat |
47835276 |
T |
|
| Q |
101 |
gtgataataaagtgatacataccacttcacttcacttc-----ccatcactcacagtcacagtattgaaactcacactttgtttgcgnnnnnnngtggta |
195 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
47835277 |
gtgataataaagtgatacataccacttcacttcacttcacttcccatcactcacagtcacagtattgaaactcacactttgtttgcgtttttttgtggta |
47835376 |
T |
|
| Q |
196 |
aagttagaaaacacaacacattctttctatctagtttcattccatttccagcaagcaattgcattgcatctaccaacaatttaccta |
282 |
Q |
| |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47835377 |
aagtaagaaaacacaacacattctttctatctagtttcattccatttccagcaagcaattgcattgcatctaccaacaatttaccta |
47835463 |
T |
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