View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0883_low_4 (Length: 444)
Name: NF0883_low_4
Description: NF0883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0883_low_4 |
 |  |
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[»] scaffold0043 (1 HSPs) |
 |  |  |
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[»] scaffold0911 (1 HSPs) |
 |  |  |
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[»] scaffold0401 (1 HSPs) |
 |  |  |
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[»] scaffold0083 (2 HSPs) |
 |  |  |
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[»] scaffold0273 (1 HSPs) |
 |  |  |
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[»] scaffold0637 (5 HSPs) |
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[»] scaffold0134 (1 HSPs) |
 |  |  |
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[»] scaffold0014 (1 HSPs) |
 |  |  |
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[»] scaffold0214 (3 HSPs) |
 |  |  |
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[»] scaffold0002 (1 HSPs) |
 |  |  |
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Alignment Details
Target: scaffold0043 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 26 - 352
Target Start/End: Original strand, 13127 - 13449
Alignment:
Q |
26 |
ggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcattatt |
125 |
Q |
|
|
|||||||||||||||||||||||| ||||||||| || ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
T |
13127 |
ggagacctaaacagagcatagacggcaccaggaagccgaagaacacgcattggatctcaccaaactcattgttggttctggtttatgtatgttcattatt |
13226 |
T |
 |
Q |
126 |
ttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgttaag |
225 |
Q |
|
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
13227 |
ttatatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgttaag |
13326 |
T |
 |
Q |
226 |
aactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaac |
325 |
Q |
|
|
|||| ||||||| ||||||||||||||| |||||||| |||| |||||||| |||||||||||| ||| |||||||| ||||||| |||||||||| |
|
|
T |
13327 |
aactctctttgacatcaatgaaaacctagtctttattcagaa----ttatttgtgttcattgctttttgtataattgtttgcatgactattaaccctaac |
13422 |
T |
 |
Q |
326 |
ttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||||||||||||||||||||||||||| |
|
|
T |
13423 |
ttctttcaatcacataaattgatctta |
13449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 22 - 348
Target Start/End: Complemental strand, 44018379 - 44018057
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
|||||||||| |||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
44018379 |
ttttggagacaaaaacagagcatagaagacaccaggaagctaaagaacacgcattggatctcaccaaactcatagttggttctggtttatgtatgttcac |
44018280 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
44018279 |
tattttctatgtatttgattgtttagttatgagtagctgaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
44018180 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||||| ||||||| |||||||||||||||||||||||| |||||||||| || | | |||||||||||||||||||||||||||||||||||| |
|
|
T |
44018179 |
taagaactctctttgacatcaatgaaaacctaatctttattcagaattattt----gtgcttaatgcttttcttatgattgtttgtatgactactaaccc |
44018084 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgat |
348 |
Q |
|
|
|| |||||||||||||||||||||||| |
|
|
T |
44018083 |
tagcttctttcaatcacataaattgat |
44018057 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 22 - 357
Target Start/End: Original strand, 38430925 - 38431255
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
||||||||||||||||| ||||||||| |||||||||| | ||||||||||| ||||||| ||| ||||||||||||||| || ||||||||||||| | |
|
|
T |
38430925 |
ttttggagacctaaacatagcatagacaacaccaggaagctgaagaacacgcagtggatctcacccaactcatagttggttttgatttatgtatgttcta |
38431024 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||| |
|
|
T |
38431025 |
ttattt-ctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatttgtgagc-atgtaatttg |
38431122 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||||||||| ||||||| ||||||| ||||||| |||||||| |||||||||| || | | ||||||||||||||||||||||||||||||||||| |
|
|
T |
38431123 |
ttaagaactctctttgacatcaatgtaaacctagtctttattcagaattattt----gtgcttactgcttttcttatgattgtttgtatgactactaacc |
38431218 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgatcttaaaaat |
357 |
Q |
|
|
||| |||||||||||||||||||||||||||| |||| |
|
|
T |
38431219 |
ctagcttctttcaatcacataaattgatcttagaaat |
38431255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 26 - 352
Target Start/End: Complemental strand, 3541749 - 3541429
Alignment:
Q |
26 |
ggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcattatt |
125 |
Q |
|
|
||||||||||| |||||||||||| ||||||||| | |||||||||| ||||||| | |||||| |||||||||||||||||||||||||||| |||| |
|
|
T |
3541749 |
ggagacctaaatagagcatagacggcaccaggaagctgaagaacacgcggtggatctcagcaaacttatagttggttctggtttatgtatgttcactatt |
3541650 |
T |
 |
Q |
126 |
ttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgttaag |
225 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||| |
|
|
T |
3541649 |
ttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagtcatgagatgaatctttgtgatctgttgaccatgtaatttg--aag |
3541552 |
T |
 |
Q |
226 |
aactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaac |
325 |
Q |
|
|
|||| ||||| | ||||||||||||||| |||| ||| |||| |||||||| ||||||||||||| |||||||||||| ||||||| |||||||| | |
|
|
T |
3541551 |
aactctctttaacatcaatgaaaacctagtcttcattcagaa----ttatttgtgttcattgcttttcgtatgattgtttgaatgactattaaccctagc |
3541456 |
T |
 |
Q |
326 |
ttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||||||||||||||||||||||||||| |
|
|
T |
3541455 |
ttctttcaatcacataaattgatctta |
3541429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 6963819 - 6964144
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
||||||||||||||||||||||||||| |||||||||| |||| |||||| ||||||| | | |||||||||||||||||| ||||||||||||| | |
|
|
T |
6963819 |
ttttggagacctaaacagagcatagacaacaccaggaagttgaagagcacgcagtggatctcagccaactcatagttggttctgatttatgtatgttcta |
6963918 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |
|
|
T |
6963919 |
tta-tttctatgtattcgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtg-agcatgtaatttg |
6964016 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||||||||| ||||||| ||||||||||||||| |||||||| |||| ||||| || | | || |||||||||||||||||||||||||||||||| |
|
|
T |
6964017 |
ttaagaactctctttgacatcaatgaaaacctagtctttattcagaa----ttattggtgcttaatgtttttcttatgattgtttgtatgactactaacc |
6964112 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||| |||||||||||||||||||||||||||| |
|
|
T |
6964113 |
ctaccttctttcaatcacataaattgatctta |
6964144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 22 - 352
Target Start/End: Complemental strand, 12803850 - 12803525
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
||||||||||||||||||||||||||| |||||| || | ||||||| ||| ||||||| ||| |||||||||||||||||| ||||||||||||| | |
|
|
T |
12803850 |
ttttggagacctaaacagagcatagacagcaccagaaagctgaagaacatgcagtggatctcacccaactcatagttggttctgatttatgtatgttcta |
12803751 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||| |
|
|
T |
12803750 |
ttattt-ctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatttgtgagc-atgtaatttg |
12803653 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||||||||| ||||||| ||||||| ||||||| |||||||| |||||||||| || | | |||||||||||||||||||| |||||||||||||| |
|
|
T |
12803652 |
ttaagaactctctttgacatcaatgtaaacctagtctttattcagaattattt----gtgcttaatgcttttcttatgattgtttatatgactactaacc |
12803557 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||| |||||||||||||||||||||||||||| |
|
|
T |
12803556 |
ctagcttctttcaatcacataaattgatctta |
12803525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 26 - 352
Target Start/End: Original strand, 26152687 - 26153008
Alignment:
Q |
26 |
ggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-attat |
124 |
Q |
|
|
||||||||||||| |||||||||||||||||||| | |||||||||| ||||||| ||| |||||||||||||| || ||||||||||||| ||||| |
|
|
T |
26152687 |
ggagacctaaacaaagcatagacgacaccaggaagctgaagaacacgcggtggatctcacccaactcatagttggtattgatttatgtatgttctattat |
26152786 |
T |
 |
Q |
125 |
tttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgttaa |
224 |
Q |
|
|
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |
|
|
T |
26152787 |
ttt-tatgtatttaattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgt-aagcatgtaatttgttaa |
26152884 |
T |
 |
Q |
225 |
gaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaa |
324 |
Q |
|
|
||||| ||||||| ||||||||||||||| |||||||| | || |||||||| | | |||||| |||||||| ||| |||||||||||||||||| |
|
|
T |
26152885 |
gaactctctttgacatcaatgaaaacctagtctttattca----taattatttgtgcttaacgctttttttatgattctttttatgactactaaccctaa |
26152980 |
T |
 |
Q |
325 |
cttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||||||||||||||||||||||| |
|
|
T |
26152981 |
cttctttcaatcacataaattgatctta |
26153008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 43548725 - 43549050
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
||||||||||||||||| |||||||||| ||||||||| | |||||||||| ||||||| ||| |||||||||||||||||| |||||| |||||| | |
|
|
T |
43548725 |
ttttggagacctaaacatagcatagacggcaccaggaagctgaagaacacgcgatggatctcacccaactcatagttggttctgatttatgcatgttcta |
43548824 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
||| ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||| |
|
|
T |
43548825 |
tta-tttctgtgtatttcattgtttagttatgagtagctaaactcttatattgattaagccatgagatgaatctttgtgatctgtg-agcatgtaatttg |
43548922 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
|||||||| ||||||| ||||||||||||||| |||||||| | || |||||||| | | ||||||||||||||||||||||||||||||||||| |
|
|
T |
43548923 |
ataagaactctctttgacatcaatgaaaacctagtctttattcaaaa----ttatttgtgcttaatgcttttcttatgattgtttgtatgactactaacc |
43549018 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||| ||||||||||||||||||||||| |||| |
|
|
T |
43549019 |
ctagcttctttcaatcacataaattgaactta |
43549050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 64 - 191
Target Start/End: Complemental strand, 28578444 - 28578315
Alignment:
Q |
64 |
aagaacacgcattggatctaac-caaactcatagttggttctggtttatgtatgttcattattttctatgtatttgattgt-ttagttatgagtagctaa |
161 |
Q |
|
|
||||||| ||| ||||||| || | ||||||| |||||||||| |||||||||||||||| || ||||| || ||||| |||||||||||||||||| |
|
|
T |
28578444 |
aagaacatgcagtggatctcacaccaactcattgttggttctgatttatgtatgttcatttaattttatgttgttaattgtcttagttatgagtagctaa |
28578345 |
T |
 |
Q |
162 |
actcttagattgattaagccatgagatgaa |
191 |
Q |
|
|
||| ||||||||||| |||||||||||||| |
|
|
T |
28578344 |
acttttagattgattgagccatgagatgaa |
28578315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 22083796 - 22083703
Alignment:
Q |
255 |
tctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||||||| | |||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
T |
22083796 |
tctttattcagaattattta----tgttcattgctttttatatgattgtttgcatgactattaaccctaacttcttgcaatcacataaattgatctta |
22083703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 275
Target Start/End: Original strand, 17601351 - 17601473
Alignment:
Q |
150 |
atgagtagctaaactcttagattgattaagccatgagatgaatct-ttgtgatctgtgaaccatgtaatttgttaagaactttctttgatatcaatgaaa |
248 |
Q |
|
|
|||||||||||| | || |||||||| ||||||||||||||||| |||| || ||||||| |||||| ||||| ||||| | |||||||||| ||| |
|
|
T |
17601351 |
atgagtagctaatttgtttgattgattgagccatgagatgaatctattgtaatatgtgaacaatgtaacttgtt-tgaactctttttgatatca---aaa |
17601446 |
T |
 |
Q |
249 |
acctaatctttattgagaattatttat |
275 |
Q |
|
|
||||| |||||||| |||||||||||| |
|
|
T |
17601447 |
acctagtctttatttagaattatttat |
17601473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 352
Target Start/End: Complemental strand, 23467437 - 23467393
Alignment:
Q |
308 |
atgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
T |
23467437 |
atgactattaaccctaacttcttacaatcacataaattgatctta |
23467393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 26182080 - 26182138
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctt |
330 |
Q |
|
|
|||||||| ||||||||||||| ||| |||| ||||||||||| |||||||| |||||| |
|
|
T |
26182080 |
ttatttgtgttcattgcttttcatataattgcttgtatgactattaaccctagcttctt |
26182138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 330
Target Start/End: Complemental strand, 28578309 - 28578198
Alignment:
Q |
213 |
gtaatttgttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgac |
312 |
Q |
|
|
||||||||||||| ||| |||||||||||| |||||| ||||| |||||| | || || ||||| || | |||||||| ||| |||| |||||||| |
|
|
T |
28578309 |
gtaatttgttaagtactctctttgatatcagtgaaaatctaatttttattcaaaa----ttgtttgtatttaatgcttttcatataattg--tgtatgac |
28578216 |
T |
 |
Q |
313 |
tactaaccctaacttctt |
330 |
Q |
|
|
||||| |||||||||||| |
|
|
T |
28578215 |
tactagccctaacttctt |
28578198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 748554 - 748458
Alignment:
Q |
88 |
aactcatagttggttctggtttatgtatgttcattattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatga |
185 |
Q |
|
|
|||||||||||||| | | |||||||||||||| | || | |||| | | |||| ||||||||||||||||||| |||||| ||||| |||||||| |
|
|
T |
748554 |
aactcatagttggtccggatttatgtatgttcactcttgtttatgcttataattg-ttagttatgagtagctaaattcttagtctgattgagccatga |
748458 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 20100305 - 20100346
Alignment:
Q |
144 |
ttagttatgagtagctaaactcttagattgattaagccatga |
185 |
Q |
|
|
|||| ||||||||||||||||||||| |||||| |||||||| |
|
|
T |
20100305 |
ttagctatgagtagctaaactcttagtttgattgagccatga |
20100346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 22232965 - 22232892
Alignment:
Q |
276 |
ttgttttcattgcttttcttatgattgttt-gtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||| |||||||||||| ||| ||||||| ||||||||| |||||||| |||||| |||| |||| ||||||| |
|
|
T |
22232965 |
ttgtgttcattgctttttatataattgttttgtatgactattaaccctagcttcttgcaattacatgaattgat |
22232892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 22253774 - 22253847
Alignment:
Q |
276 |
ttgttttcattgcttttcttatgattgttt-gtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||| |||||||||||| ||| ||||||| ||||||||| |||||||| |||||| |||| |||| ||||||| |
|
|
T |
22253774 |
ttgtgttcattgctttttatataattgttttgtatgactattaaccctagcttcttgcaattacatgaattgat |
22253847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 22257038 - 22257111
Alignment:
Q |
276 |
ttgttttcattgcttttcttatgattg-tttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||| |||||||||||| ||| |||| |||||||||||| |||||||| |||||| |||| |||| ||||||| |
|
|
T |
22257038 |
ttgtgttcattgctttttatataattgctttgtatgactattaaccctagcttcttgcaattacatgaattgat |
22257111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 24)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 23 - 352
Target Start/End: Original strand, 12746338 - 12746663
Alignment:
Q |
23 |
tttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcatt |
122 |
Q |
|
|
|||||||||||||| |||||||||||||||||||||| || ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| | |
|
|
T |
12746338 |
tttggagacctaaatagagcatagacgacaccaggaagccgaagaacacgcattggatttcaccaaactcatagttggttctggtttatgtatgttcact |
12746437 |
T |
 |
Q |
123 |
attttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgtt |
222 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
12746438 |
attttctatgtatttgattgtttagttatgagtagctaaactcttaaattgattaagccatgagatggatctttgtgatctgtgaaccatgtaatttgtt |
12746537 |
T |
 |
Q |
223 |
aagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccct |
322 |
Q |
|
|
|| |||| ||||||| ||||||||||||||| |||||||| |||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||||| |
|
|
T |
12746538 |
aataactctctttgacatcaatgaaaacctagtctttattcagaa----ttatttgtgttcattgcttttcgtatgattgtttgcatgactattaaccct |
12746633 |
T |
 |
Q |
323 |
aacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
| |||||||||||||||||||||||||||| |
|
|
T |
12746634 |
agcttctttcaatcacataaattgatctta |
12746663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 22 - 352
Target Start/End: Complemental strand, 35027720 - 35027394
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||||| | ||||||||||| ||||||| ||| | |||||||||||||||||||||||||||||| |
|
|
T |
35027720 |
ttttggagacctaaacagagcatagacggcaccaggaagctgaagaacacgcagtggatctcacccatctcatagttggttctggtttatgtatgttcgc |
35027621 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
|||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
35027620 |
tattttctatgtgtttgattgtttagttatgagtagctaagctcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
35027521 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||||| ||||||| ||||||||||||||| |||||||| |||||||||| || | | |||||||||||||||||||| ||||||||||||||| |
|
|
T |
35027520 |
taagaactctctttgacatcaatgaaaacctagtctttattcagaattattt----gtgcttaatgcttttcttatgattgtttatatgactactaaccc |
35027425 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|| |||||||||||||||||||||||||||| |
|
|
T |
35027424 |
tagcttctttcaatcacataaattgatctta |
35027394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 22 - 352
Target Start/End: Complemental strand, 28895067 - 28894742
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
||||||||||||||||| |||||||||| ||||||||| | |||||||||| ||||||| ||| |||||||||||||||||| ||||||||||||| | |
|
|
T |
28895067 |
ttttggagacctaaacatagcatagacggcaccaggaagctgaagaacacgcggtggatctcacccaactcatagttggttctgatttatgtatgttcta |
28894968 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
|||||| |||||||||| |||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||| |
|
|
T |
28894967 |
ttattt-ctatgtatttaattgtttagttatgtgtatctaaactcttagattgattaagccataagatgaatctttgtgatctgtgagc-atgtaatttg |
28894870 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||||||||| ||||||| |||||| |||||||| |||||||| |||||||||| || | | ||||||||||||||||||||||||||||||||||| |
|
|
T |
28894869 |
ttaagaactctctttgacatcaataaaaacctagtctttattcagaattattt----gtgcttaatgcttttcttatgattgtttgtatgactactaacc |
28894774 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
28894773 |
ctaacttctttcaatcacataaattgatctta |
28894742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 22 - 352
Target Start/End: Complemental strand, 33679774 - 33679449
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
|||| |||||||||||||||||||||| |||||||||| ||||||||| | ||||||| ||| |||| ||||||||||||| |||||||||||| | |
|
|
T |
33679774 |
ttttagagacctaaacagagcatagacaacaccaggaagttgaagaacacgtaatggatctcacccaactaatagttggttctgatttatgtatgttata |
33679675 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| || |||||||||| |
|
|
T |
33679674 |
ttattt-ctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtaatatgt-aagtatgtaatttg |
33679577 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||||||||| ||||||| ||||||||||||||| |||||||| |||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||| |
|
|
T |
33679576 |
ttaagaactctctttgacatcaatgaaaacctagtctttatttagaa----ttatttgtgttcattgcttttcgtatgattgtttgcatgactattaacc |
33679481 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||||||||||||||||||||||||| |||||| |
|
|
T |
33679480 |
ctaacttctttcaatcacataaatttatctta |
33679449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 22 - 273
Target Start/End: Complemental strand, 11296633 - 11296383
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
||||||||||||||| ||||||||||| |||||||||| | |||||||| | ||||||| ||| |||||||||||||||||| ||||||||||||| | |
|
|
T |
11296633 |
ttttggagacctaaatagagcatagacaacaccaggaagctgaagaacacactgtggatctcacccaactcatagttggttctgatttatgtatgttcta |
11296534 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
|||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||||||||| |
|
|
T |
11296533 |
ttattt-ctatgtatttggttgtttagttatgagtagctaaactcttaaattgattaagccatgtgatgaatctttgtgatctgtg-agcatgtaatttg |
11296436 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattattt |
273 |
Q |
|
|
||||||||| ||||||| ||||||||||||||| |||||||| | |||||||| |
|
|
T |
11296435 |
ttaagaactctctttgacatcaatgaaaacctattctttattcaaaattattt |
11296383 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 22 - 273
Target Start/End: Complemental strand, 15579468 - 15579218
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
||||||||||||||| |||||||||||| |||||||||||| |||||||||| | ||||| ||| |||||||||||||||||| |||||||||||||| |
|
|
T |
15579468 |
ttttggagacctaaatagagcatagacggcaccaggaaaccgcagaacacgcagtagatctcacccaactcatagttggttctgatttatgtatgttcac |
15579369 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||||||| ||||||||| |||||||||| |
|
|
T |
15579368 |
tattttctatgtatttgattgttttgttatgagtagctaaactcttagattaattaagctatgagataaatctttgcgatctgtgatgg-tgtaatttgt |
15579270 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattattt |
273 |
Q |
|
|
|||||||| ||||| | |||||||||| ||||||||||||| | |||||||| |
|
|
T |
15579269 |
taagaactctctttaacatcaatgaaaccctaatctttattcataattattt |
15579218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 357
Target Start/End: Original strand, 17696366 - 17696451
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatcttaaaaat |
357 |
Q |
|
|
|||||||| ||||| ||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |
|
|
T |
17696366 |
ttatttgtgttcatcgcttttcatatgactgtttgtatgactattaaccctaacttcttgcaatcacataaattgatcttagaaat |
17696451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 34502120 - 34502200
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||||||||| |||||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||| |
|
|
T |
34502120 |
ttatttgtgttcattgcttttcatatgattgtttgcatgactattaaccctagcttcttacaatcacataaattgatctta |
34502200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 31123207 - 31123287
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||||||||||||| | ||||||||||| |
|
|
T |
31123207 |
ttatttgttttcattgcttttattatgattgtttgcatgactattaaccctagcttctttcaatcatgttaattgatctta |
31123287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 31262548 - 31262628
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||||||||| |||||||||||| |||| || |||| |||||||||| ||||||||||||||||||||| |
|
|
T |
31262548 |
ttatttgtgttcattgcttttcatatgattgtttgcatgattattaactctaacttcttgcaatcacataaattgatctta |
31262628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 2331059 - 2331139
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||||||||| |||||||||||| ||||||| | | |||| ||||||||||| |||||||||||||||| |
|
|
T |
2331059 |
ttatttgtgttcattgcttttcatatgattgtttgcatgactattgatcctagcttctttcaataacataaattgatctta |
2331139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 5618649 - 5618573
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||||||| || |||||||||| |||||||||||| ||||||| |||||||| |||||| ||||||||||||||||| |
|
|
T |
5618649 |
ttatttgtgtttattgcttttcatatgattgtttgcatgactattaaccctagcttcttgcaatcacataaattgat |
5618573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 352
Target Start/End: Complemental strand, 7560688 - 7560436
Alignment:
Q |
88 |
aactcatagttggttctggtttatgtatgttcattattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgaga |
187 |
Q |
|
|
|||||||||||||||| | |||||||||||| | | || | |||| | ||||||||||||||||||||||||| ||||||| |||||| | |||| || |
|
|
T |
7560688 |
aactcatagttggttcggatttatgtatgtttactcttgtaaatgtttatgattgtttagttatgagtagctaatctcttaggttgattgaaccat--ga |
7560591 |
T |
 |
Q |
188 |
tgaatct-ttgtgatctgtgaaccatgtaatttgttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcatt |
286 |
Q |
|
|
|||| || ||||||| |||||| || ||| ||| | |||| ||||| ||||||| | | | |||||||| ||||||||||| | |||| | |
|
|
T |
7560590 |
tgaacctattgtgatatgtgaatca-gta----gttga-aactctctttattatcaat-attattcagtctttattcagaattattta----tgttcagt |
7560502 |
T |
 |
Q |
287 |
gcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
| |||||||||||||||||||||||| | |||||||| ||||||||||||| || ||||||||||| |
|
|
T |
7560501 |
gtttttcttatgattgtttgtatgacaattaaccctagcttctttcaatcatattaattgatctta |
7560436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 9314139 - 9314046
Alignment:
Q |
255 |
tctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||||||| | |||||||||||| |||||||||||| ||||||| |||||||| ||| || ||||||||||||||||||||| |
|
|
T |
9314139 |
tctttattcagaattattta----tgttcattgctttttatatgattgtttgcatgactattaaccctagcttattgcaatcacataaattgatctta |
9314046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 357
Target Start/End: Original strand, 2330407 - 2330492
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatcttaaaaat |
357 |
Q |
|
|
|||||||| ||||||| ||||| ||||||| |||| ||||||| |||| ||| |||||||||| |||||||||||||||| |||| |
|
|
T |
2330407 |
ttatttgtgttcattgtttttcatatgattatttgcatgactattaactctagattctttcaataacataaattgatcttagaaat |
2330492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 2330898 - 2330995
Alignment:
Q |
88 |
aactcatagttggttctggtttatgtatgttcattattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatga |
185 |
Q |
|
|
||||||||||| |||| | |||||||||||| | | || | |||| | |||| |||| | |||||||||||||||||||||||||||| |||||||| |
|
|
T |
2330898 |
aactcatagttagttcggatttatgtatgtttactcttgtttatgcttatgatcgttttgatatgagtagctaaactcttagattgattgagccatga |
2330995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 28117617 - 28117693
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||||| | |||||||||||| ||||||||||| |||| || |||||||| |||||| ||||||||||||||||| |
|
|
T |
28117617 |
ttatttatgttcattgctttttatatgattgttttcatgattattaaccctagcttcttgcaatcacataaattgat |
28117693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 185
Target Start/End: Original strand, 2330185 - 2330332
Alignment:
Q |
39 |
gagcatagacgacaccaggaaaccaaagaacacgcattggatctaac-caaactcatagttggttctggtttatgtatgttcattattttctatgtattt |
137 |
Q |
|
|
||||||||| |||||||||| || |||||||| || || |||| | | |||||||||||||||| |||||||||||| | | || | |||| | | |
|
|
T |
2330185 |
gagcatagaagacaccaggagactaaagaacaagccatgaatctcataccaactcatagttggttcgaatttatgtatgtttactcttgtttatgcttat |
2330284 |
T |
 |
Q |
138 |
gattgtttagttatgagtagctaaactcttagattgattaagccatga |
185 |
Q |
|
|
||| |||| | |||||||| ||||||||||||||||||| |||||||| |
|
|
T |
2330285 |
gatcgttttgatatgagtatctaaactcttagattgattgagccatga |
2330332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 22920307 - 22920365
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctt |
330 |
Q |
|
|
|||||||| ||||||||||||| ||| |||| ||||||||||| |||||||| |||||| |
|
|
T |
22920307 |
ttatttgtgttcattgcttttcatataattgcttgtatgactattaaccctagcttctt |
22920365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 183
Target Start/End: Original strand, 31122985 - 31123130
Alignment:
Q |
39 |
gagcatagacgacaccaggaaaccaaagaacacgcattggatctaac-caaactcatagttggttctggtttatgtatgttcattattttctatgtattt |
137 |
Q |
|
|
||||||||| |||||||||| ||| ||||||| || || |||| | | |||||||||||||| | | |||||||||||| | || | |||| | | |
|
|
T |
31122985 |
gagcatagaagacaccaggagaccgaagaacaagccctgaatctcataccaactcatagttggtccggatttatgtatgttttctcttgtttatgcttat |
31123084 |
T |
 |
Q |
138 |
gattgtttagttatgagtagctaaactcttagattgattaagccat |
183 |
Q |
|
|
|||||||||||||| ||||| ||||||||||| |||||| |||||| |
|
|
T |
31123085 |
gattgtttagttatcagtagttaaactcttagtttgattgagccat |
31123130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 17696243 - 17696291
Alignment:
Q |
137 |
tgattgtttagttatgagtagctaaactcttagattgattaagccatga |
185 |
Q |
|
|
||||||||||| ||||||||||||| ||||||| |||||| |||||||| |
|
|
T |
17696243 |
tgattgtttagctatgagtagctaagctcttagtttgattgagccatga |
17696291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 17231463 - 17231560
Alignment:
Q |
88 |
aactcatagttggttctgg-tttatgtatgttcattattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatga |
185 |
Q |
|
|
|||||||||||||| |||| |||||||||||||| | || | ||||| | | ||||| || |||||||||||||||||||| |||||| |||||||| |
|
|
T |
17231463 |
aactcatagttggt-ctggatttatgtatgttcactcttatttatgtttataattgtgaagccatgagtagctaaactcttagtttgattgagccatga |
17231560 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 3827126 - 3827081
Alignment:
Q |
303 |
tttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||||||||||| ||||||||||||||| |||| |||| ||||||| |
|
|
T |
3827126 |
tttgtatgactattaaccctaacttcttgcaattacatgaattgat |
3827081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 22464192 - 22464244
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaa |
324 |
Q |
|
|
|||||| | |||||||||||| |||||||||||| ||||||| ||||||||| |
|
|
T |
22464192 |
ttatttatgttcattgctttttatatgattgtttgcatgactattaaccctaa |
22464244 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 22)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 21 - 352
Target Start/End: Original strand, 4249916 - 4250243
Alignment:
Q |
21 |
tttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttca |
120 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |
|
|
T |
4249916 |
tttttggagacctaaacatagcatagacgacaccaggaagctgaagaacacgcattggatctcaccaaactcatagttggttctggtttatgtatgctca |
4250015 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
T |
4250016 |
ctattttctatgcatttgattgtgtagttatgagtagctaaactcttagattgattaagtcatgagatgaatctttgtgatctgtgaaccatgtaatttg |
4250115 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||||| ||| ||||||| ||||||||||||||| |||||||| |||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||| |
|
|
T |
4250116 |
ttaagtactctctttgacatcaatgaaaacctagtctttattcagaa----ttatttgtgttcattgcttttcgtatgattgtttgcatgactattaacc |
4250211 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
4250212 |
ctaacttctttcaatcacataaattgatctta |
4250243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 22 - 348
Target Start/End: Original strand, 28326974 - 28327297
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaa-gaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttca |
120 |
Q |
|
|
|||||||||| |||||||||||||| ||||||||||| | ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
28326974 |
ttttggagacaaaaacagagcatagaagacaccaggaagctaaaagaacacgcattggatctcaccaaactcatagttggttctggtttatgtatgttca |
28327073 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28327074 |
ctattttctatgtatttgattgtttagttatgagtagctgaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
28327173 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||||||||| ||||||| ||||||||||||||| |||||||| |||||||||| || | | ||||||||||||||||||||||||||||||||||| |
|
|
T |
28327174 |
ttaagaactctctttgacatcaatgaaaacctagtctttattcagaattattt----gtgcttaatgcttttcttatgattgtttgtatgactactaacc |
28327269 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
||| |||||||||||||||||||||||| |
|
|
T |
28327270 |
ctagcttctttcaatcacataaattgat |
28327297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 22 - 348
Target Start/End: Original strand, 28330299 - 28330622
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaa-gaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttca |
120 |
Q |
|
|
|||||||||| |||||||||||||| ||||||||||| | ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
28330299 |
ttttggagacaaaaacagagcatagaagacaccaggaagctaaaagaacacgcattggatctcaccaaactcatagttggttctggtttatgtatgttca |
28330398 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28330399 |
ctattttctatgtatttgattgtttagttatgagtagctgaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
28330498 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||||||||| ||||||| ||||||||||||||| |||||||| |||||||||| || | | ||||||||||||||||||||||||||||||||||| |
|
|
T |
28330499 |
ttaagaactctctttgacatcaatgaaaacctagtctttattcagaattattt----gtgcttaatgcttttcttatgattgtttgtatgactactaacc |
28330594 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
||| |||||||||||||||||||||||| |
|
|
T |
28330595 |
ctagcttctttcaatcacataaattgat |
28330622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 90 - 348
Target Start/End: Original strand, 3305449 - 3305703
Alignment:
Q |
90 |
ctcatagttggttctggtttatgtatgttcattattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatg |
189 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
T |
3305449 |
ctcatagttggttctggtttatgtatgttcactattttctatgtatttgattgtttagttatgagtagctgaactcttagattgattaagccatgagatg |
3305548 |
T |
 |
Q |
190 |
aatctttgtgatctgtgaaccatgtaatttgttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgct |
289 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| |||||||||| || | | |||| |
|
|
T |
3305549 |
aatctttgtgatctgtgaaccatgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattattt----gtgcttaatgct |
3305644 |
T |
 |
Q |
290 |
tttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
3305645 |
tttcttatgattgtttgtatgactactaaccctagcttctttcaatcacataaattgat |
3305703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 133 - 352
Target Start/End: Original strand, 27054514 - 27054728
Alignment:
Q |
133 |
tatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgttaagaactttc |
232 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||| || |
|
|
T |
27054514 |
tatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgagc-atgtaatttattaagaactctc |
27054612 |
T |
 |
Q |
233 |
tttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttc |
332 |
Q |
|
|
||||| ||||||||||||||| || ||||| |||||||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
27054613 |
tttgacatcaatgaaaacctagtcattattcagaattattt----gtgcttaatgcttttcttatgattgtttgtatgactactaaccctaacttctttc |
27054708 |
T |
 |
Q |
333 |
aatcacataaattgatctta |
352 |
Q |
|
|
|||||||||||||||||||| |
|
|
T |
27054709 |
aatcacataaattgatctta |
27054728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 9157766 - 9157846
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
T |
9157766 |
ttatttgtgttcattgcttttcatatgattgtttgcatgactagtaaccctaacttcttgcaatcacataaattgatctta |
9157846 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 150 - 352
Target Start/End: Original strand, 19868642 - 19868840
Alignment:
Q |
150 |
atgagtagctaaactcttagattgattaagccatgagatgaatct-ttgtgatctgtgaaccatgtaatttgttaagaactttctttgatatcaatgaaa |
248 |
Q |
|
|
|||||||||||| ||| |||||| || || |||||||||||||| ||||||||| |||||||||||||||||| | |||| || || || |||||| || |
|
|
T |
19868642 |
atgagtagctaagctcctagattaatcgagtcatgagatgaatctattgtgatctatgaaccatgtaatttgttta-aactctccttaat-tcaatggaa |
19868739 |
T |
 |
Q |
249 |
acctaatctttattgagaattatttatttgttttcattgcttttcttatgattg-tttgtatgactactaaccctaacttctttcaatcacataaattga |
347 |
Q |
|
|
|||| |||||||| |||| |||||||| || ||||||||| |||||||| |||| ||||||| |||||||| |||||| |||| ||||||||||| |
|
|
T |
19868740 |
tcctagtctttattcagaa----ttatttgtgtttgttgcttttcatatgattgctttgcatgactattaaccctagcttcttccaattacataaattga |
19868835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 9154593 - 9154673
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||||||||| |||||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||| |
|
|
T |
9154593 |
ttatttgtattcattgcttttcatatgattgtttgcatgactagtaatcctaacttcttgcaatcacataaattgatctta |
9154673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 18882991 - 18883071
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||||||||| |||||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||| |
|
|
T |
18882991 |
ttatttgtgttcattgcttttcatatgattgtttgcatgactattaaccctagcttcttacaatcacataaattgatctta |
18883071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 20536917 - 20536838
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||||||| |
|
|
T |
20536917 |
ttatttgtgttcattgcttttcttatgattgtttgtatgactattaaccctaacttc-ttcaatcatattaattgatctta |
20536838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 352
Target Start/End: Complemental strand, 42354750 - 42354672
Alignment:
Q |
274 |
atttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||| ||||||||||||| |||||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||| |
|
|
T |
42354750 |
atttgtgttcattgcttttcatatgattgtttgcatgactattaaccctagcttcttgcaatcacataaattgatctta |
42354672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 353
Target Start/End: Original strand, 44508586 - 44508667
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatcttaa |
353 |
Q |
|
|
|||||||| ||||||| ||||| |||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||||| |
|
|
T |
44508586 |
ttatttgtgttcattgtttttcatatgattgtttgcatgactattaaccctagcttcttgcaatcacataaattgatcttaa |
44508667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 20537087 - 20536999
Alignment:
Q |
88 |
aactcatagttggttctggtttatgtatgttcattattttctatgtatttgattgtttagttatgagtagctaaactcttagattgatt |
176 |
Q |
|
|
|||||||||||||| | | |||||||||||| | | || ||||||| | | |||||||||||||||||||||||||||||||||||||| |
|
|
T |
20537087 |
aactcatagttggtccagatttatgtatgtttactcttgtctatgtttataattgtttagttatgagtagctaaactcttagattgatt |
20536999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 25491863 - 25491936
Alignment:
Q |
150 |
atgagtagctaaactcttagattgattaagccatgagatgaatct-ttgtgatctgtgaaccatgtaatttgtt |
222 |
Q |
|
|
|||||||||||| |||||||||| || ||||||||||||||||| ||||||||| |||||||||||||||||| |
|
|
T |
25491863 |
atgagtagctaagctcttagattaatcgagccatgagatgaatctattgtgatctatgaaccatgtaatttgtt |
25491936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 262
Target Start/End: Original strand, 11270736 - 11270832
Alignment:
Q |
166 |
ttagattgattaagccatgagatgaatcttt-gtgatctgtgaaccatgtaatttgttaagaactttctttgatatcaatgaaaacctaatctttatt |
262 |
Q |
|
|
||||||||||| |||||||| |||| ||||| || |||| || | ||||||||| ||||| ||||||||||||||||||||||||||| |||||||| |
|
|
T |
11270736 |
ttagattgattgagccatgaaatgagtcttttgtaatctatgggc-atgtaatttattaagtactttctttgatatcaatgaaaacctattctttatt |
11270832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 18551458 - 18551526
Alignment:
Q |
284 |
attgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||| |||||||||||||||||||||| |||||||||||| ||||||||||| || ||||||||||| |
|
|
T |
18551458 |
attgattttcttatgattgtttgtatggctactaaccctagcttctttcaattgtattaattgatctta |
18551526 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 18551202 - 18551305
Alignment:
Q |
16 |
ggcgatttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtat |
115 |
Q |
|
|
||||||||| ||||| |||||||||||||||||||||||| || | ||||||||||| ||||| | ||| ||||||||| || ||| ||||||||| |
|
|
T |
18551202 |
ggcgattttcggagagttaaacagagcatagacgacaccagaaagctgaagaacacgcagtggatatcacccaactcatagctgtttcaaatttatgtat |
18551301 |
T |
 |
Q |
116 |
gttc |
119 |
Q |
|
|
|||| |
|
|
T |
18551302 |
gttc |
18551305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 281 - 348
Target Start/End: Original strand, 10963194 - 10963261
Alignment:
Q |
281 |
ttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
||||||||||||| ||| |||||||||||||||| |||||||| |||| | |||| |||| ||||||| |
|
|
T |
10963194 |
ttcattgcttttcatataattgtttgtatgactattaaccctagcttcgtgcaattacatgaattgat |
10963261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 281 - 348
Target Start/End: Original strand, 10966703 - 10966770
Alignment:
Q |
281 |
ttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
||||||||||||| ||| |||||||||||||||| |||||||| |||| | |||| |||| ||||||| |
|
|
T |
10966703 |
ttcattgcttttcatataattgtttgtatgactattaaccctagcttcgtgcaattacatgaattgat |
10966770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 23375068 - 23375010
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctt |
330 |
Q |
|
|
|||||||| ||||||||||||| ||| |||| | ||||||||| |||||||| |||||| |
|
|
T |
23375068 |
ttatttgtgttcattgcttttcatataattgctcgtatgactattaaccctagcttctt |
23375010 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 29233926 - 29233868
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctt |
330 |
Q |
|
|
|||||||| ||||||| ||||| ||| |||| ||||||||||| |||||||| |||||| |
|
|
T |
29233926 |
ttatttgtgttcattgtttttcatataattgcttgtatgactattaaccctagcttctt |
29233868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 10959682 - 10959754
Alignment:
Q |
276 |
ttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||| ||||||||||||| ||| |||| ||||||||||| ||||||| |||| | |||| |||| ||||||| |
|
|
T |
10959682 |
ttgtgttcattgcttttcatataattgcttgtatgactatcaaccctagcttcgtgcaattacatgaattgat |
10959754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 238; Significance: 1e-131; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 22 - 348
Target Start/End: Original strand, 33897857 - 33898179
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
|||||||||| |||||||||||||| ||||||||||| | |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
T |
33897857 |
ttttggagacaaaaacagagcatagaagacaccaggaagctaaagaacacgcattggatctcaccaagctcatagttggttctggtttatgtatgttcac |
33897956 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
33897957 |
tattttctatgtatttgattgtttagttatgagtagctgaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
33898056 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||||| ||||||| ||||||||||||||| |||||||| |||||||||| || | | |||||||||||||||||||||||||||||||||||| |
|
|
T |
33898057 |
taagaactctctttgacatcaatgaaaacctagtctttattcagaattattt----gtgcttaatgcttttcttatgattgtttgtatgactactaaccc |
33898152 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgat |
348 |
Q |
|
|
|| |||||||||||||||||||||||| |
|
|
T |
33898153 |
tagcttctttcaatcacataaattgat |
33898179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 22 - 348
Target Start/End: Complemental strand, 23441871 - 23441549
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
|||||||||| |||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
23441871 |
ttttggagacaaaaacagagcatagaagacaccaggaagctaaagaacacgcattggatctcaccaaactcatagttggttctggtttatgtatgttcac |
23441772 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
23441771 |
tattttctatgtatttgattgtttagttatgagtagctgaactcttagattgattaagccatgatatgaatctttgtgatctgtgaaccatgtaatttgt |
23441672 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||||| | ||||| |||||||||||||| |||||||| |||||||||| || | | |||||||||||||||||||||||||||||||||||| |
|
|
T |
23441671 |
taagaactctttttgacttcaatgaaaacctagtctttattcagaattattt----gtgcttaatgcttttcttatgattgtttgtatgactactaaccc |
23441576 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgat |
348 |
Q |
|
|
|| |||||||||||||||||||||||| |
|
|
T |
23441575 |
tagcttctttcaatcacataaattgat |
23441549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 19 - 352
Target Start/End: Complemental strand, 34553278 - 34552945
Alignment:
Q |
19 |
gatttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttg-----gttctggtttatgt |
113 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||| |||||||||||| |||||||||||||| |
|
|
T |
34553278 |
gatttttggagacctaaacagagcatagacgacaccaggaagctgaagaacacgcggtggatctcacccaactcatagttgagttggttctggtttatgt |
34553179 |
T |
 |
Q |
114 |
atgttcattattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatg |
213 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| | |||| |
|
|
T |
34553178 |
atgttcactattttctatgtatttgattgtttagttatgagtagttaaactcttagattgattaagcaatgagatgaatctttgtgatctgtg-agcatg |
34553080 |
T |
 |
Q |
214 |
taatttgttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgact |
313 |
Q |
|
|
|||||||||||||||| ||||||| ||||||||||||||| |||||||| |||| |||||||| | | || |||| |||||||||||||||||||| |
|
|
T |
34553079 |
taatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaa----ttatttgtgcttaatgttttttttatgattgtttgtatgact |
34552984 |
T |
 |
Q |
314 |
actaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||||| |
|
|
T |
34552983 |
actaaccctagtttctttcaatcacataaattgatctta |
34552945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 22 - 357
Target Start/End: Original strand, 18391925 - 18392255
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||| |||||||||||||||||| |||||||||||| | |
|
|
T |
18391925 |
ttttggagacctaaacagagcatagacgacaccaggaagctgaagaacacgcggtggatctcacccaactcatagttggttctgatttatgtatgttata |
18392024 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
|||||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||| |
|
|
T |
18392025 |
ttattt-ctatgtatttgatgttttagttatgagaagctaaactcttaaattgattaagccatgagatgaatctttgtgatctgtg-agcatgtaatttg |
18392122 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||||||||| ||||||| ||||||||||||||| |||||||| |||| |||||||| | | || |||||||||||||||||||||||||||||||| |
|
|
T |
18392123 |
ttaagaactctctttgacatcaatgaaaacctagtctttattcagaa----ttatttgtgcttaatggttttcttatgattgtttgtatgactactaacc |
18392218 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgatcttaaaaat |
357 |
Q |
|
|
||| |||||||||||||||||||||||||||| |||| |
|
|
T |
18392219 |
ctagcttctttcaatcacataaattgatcttagaaat |
18392255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 22 - 273
Target Start/End: Complemental strand, 50197502 - 50197252
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| ||| | |||||||||||||||| ||||||||||||| | |
|
|
T |
50197502 |
ttttggagacctaaacagagcatagacgacaccaggaagctaaagaacacgcggtggatctcacccagctcatagttggttctgatttatgtatgttcta |
50197403 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
|||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |
|
|
T |
50197402 |
ttattt-ctatgtatttaattgtttagttatgagtaactaaactcttagattgattaagccatgagatgaatctttgtgatcagtg-agcatgtaatttg |
50197305 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattattt |
273 |
Q |
|
|
||||||||| |||||| ||||||||||||||| ||||||| |||||||||| |
|
|
T |
50197304 |
ttaagaactccctttgacatcaatgaaaacctagtctttatacagaattattt |
50197252 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 6195372 - 6195675
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
|||||||||||||||||||||||||||| ||||| ||| | ||||||||| ||||||| ||| |||||||||||||||||| ||||||||||||| | |
|
|
T |
6195372 |
ttttggagacctaaacagagcatagacggcaccaagaagctgaagaacacgtggtggatctcacccaactcatagttggttctgatttatgtatgttcta |
6195471 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||| |
|
|
T |
6195472 |
tta-tttctatgtatttgattgtttagttatgagtag----------------------ccatgagatgaatctttgtgatctgtg-agcatgtaatttg |
6195547 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||| |||| ||||||| ||| ||||||||||| |||||||| |||| |||||||| | | |||||||||||||||||||||||||||||||||| |
|
|
T |
6195548 |
ttacgaacgctctttgacatcgatgaaaacctagtctttattcagaa----ttatttgtgcttaacgcttttcttatgattgtttgtatgactactaacc |
6195643 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|| |||||||||||||||||||||||||||| |
|
|
T |
6195644 |
ctggcttctttcaatcacataaattgatctta |
6195675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 149 - 352
Target Start/End: Complemental strand, 3088189 - 3087986
Alignment:
Q |
149 |
tatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgttaagaactttctttgatatcaatgaaa |
248 |
Q |
|
|
||||||||| ||| || ||||||||||||||||||||||||||| ||||| || |||| | |||||||||||||||||||| | ||||| |||||| ||| |
|
|
T |
3088189 |
tatgagtagttaagcttttagattgattaagccatgagatgaat-tttgtaatgtgtg-agcatgtaatttgttaagaactctatttgacatcaataaaa |
3088092 |
T |
 |
Q |
249 |
acctaatctttattgagaattatttatttgttttcattgcttttctta------tgattgtttgtatgactactaaccctaacttctttcaatcacataa |
342 |
Q |
|
|
||| | |||||||| | || |||| ||| | | ||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |
|
|
T |
3088091 |
acccagtctttattca----taattatctgtgcttaatgcttttcttatgattgtgattgtttgtatgactaataaccctaacttctttcaaccatataa |
3087996 |
T |
 |
Q |
343 |
attgatctta |
352 |
Q |
|
|
|||||||||| |
|
|
T |
3087995 |
attgatctta |
3087986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 17903299 - 17903202
Alignment:
Q |
88 |
aactcatagttggttctggtttatgtatgttcattattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatga |
185 |
Q |
|
|
|||||||||||||| | | |||||||||||||| | || | |||| | | |||||| || |||||||||||||||||||| |||||| |||||||| |
|
|
T |
17903299 |
aactcatagttggtccggatttatgtatgttcactcttatttatgcttataattgttaagccatgagtagctaaactcttagtttgattgagccatga |
17903202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 22 - 348
Target Start/End: Complemental strand, 40678360 - 40678037
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaa-gaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttca |
120 |
Q |
|
|
|||||||||| |||||||||||||| ||||||||||| | ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
40678360 |
ttttggagacaaaaacagagcatagaagacaccaggaagctaaaagaacacgcattggatctcaccaaactcatagttggttctggtttatgtatgttca |
40678261 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
40678260 |
ctattttctatgtatttgattgtttagttatgagtagctgaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
40678161 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||||||||| ||||||| ||||||||||||||| |||||||| |||||||||| || | | ||||||||||||||||||||||||||||||||||| |
|
|
T |
40678160 |
ttaagaactctctttgacatcaatgaaaacctagtctttattcagaattattt----gtgcttaatgcttttcttatgattgtttgtatgactactaacc |
40678065 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
||| |||||||||||||||||||||||| |
|
|
T |
40678064 |
ctagcttctttcaatcacataaattgat |
40678037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 22 - 352
Target Start/End: Complemental strand, 38316634 - 38316308
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
|||||||||||||||| |||||||||| |||||||||| | ||||||| ||| || |||| ||| ||||||| |||||||||| ||||||||||||| | |
|
|
T |
38316634 |
ttttggagacctaaactgagcatagacaacaccaggaagctgaagaacatgcagtgcatctcacccaactcattgttggttctgatttatgtatgttcta |
38316535 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttaga-ttgattaagccatgagatgaatctttgtgatctgtgaaccatgtaattt |
219 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||| | ||||||| || |
|
|
T |
38316534 |
ttattt-ctatgtatttgattgtttagttatgagtagctaaactattagatttgattaagccatgagatgaatctttgtgatatgtg-agcatgtaaatt |
38316437 |
T |
 |
Q |
220 |
gttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaac |
319 |
Q |
|
|
|||||||||| ||||||| ||||||||||||||| |||||||| |||| |||||||| | | || ||||||||||||||||||||||||||||||| |
|
|
T |
38316436 |
gttaagaactctctttgacatcaatgaaaacctagtctttattcagaa----ttatttgtgcttaatgtttttcttatgattgtttgtatgactactaac |
38316341 |
T |
 |
Q |
320 |
cctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
| || |||||||||||||||||||||||||||| |
|
|
T |
38316340 |
cgtagcttctttcaatcacataaattgatctta |
38316308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 22 - 160
Target Start/End: Complemental strand, 9748194 - 9748056
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||| |
|
|
T |
9748194 |
ttttggagacctaaacagagcatagacgacaccaggaagttgaagaacacgcgttggatctcaccaaactcctagttgattctggtttatgtatgttcat |
9748095 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagcta |
160 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| |
|
|
T |
9748094 |
tattttctatgtatttgattgtttagttatgagtagcta |
9748056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 30994313 - 30994216
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc |
119 |
Q |
|
|
|||||||||||||||| |||||| ||| ||||||||| | ||||||||||| ||||||| ||| |||||||||||||||||| ||||||||||||| |
|
|
T |
30994313 |
ttttggagacctaaacttagcataaacggcaccaggaagctaaagaacacgcggtggatctcacccaactcatagttggttctgatttatgtatgttc |
30994216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 1503774 - 1503694
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||||||||| |||||||| ||| ||||||| |||||||| |||||| ||||||||||||||||||||| |
|
|
T |
1503774 |
ttatttgtgttcattgcttttcatatgattgcttgcatgactattaaccctagcttcttgcaatcacataaattgatctta |
1503694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 4577630 - 4577710
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||||||||| ||| |||||||| ||||||| |||||||| |||||| ||||||||||||||||||||| |
|
|
T |
4577630 |
ttatttgtgttcattgcttttcatataattgtttgcatgactattaaccctatcttcttacaatcacataaattgatctta |
4577710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 1506978 - 1506898
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||| ||||| |||||||| ||| ||||||| |||||||| |||||| ||||||||||||||||||||| |
|
|
T |
1506978 |
ttatttgtgttcattgtttttcatatgattgcttgcatgactattaaccctagcttcttgcaatcacataaattgatctta |
1506898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 38326147 - 38326227
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| |||||| ||||| |||||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||| |
|
|
T |
38326147 |
ttatttgtgttcattacttttgatatgattgtttgcatgactattaaccctagcttcttgcaatcacataaattgatctta |
38326227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 38326612 - 38326532
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| |||||| ||||| |||||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||| |
|
|
T |
38326612 |
ttatttgtgttcattacttttgatatgattgtttgcatgactattaaccctagcttcttgcaatcacataaattgatctta |
38326532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 352
Target Start/End: Original strand, 30719563 - 30719632
Alignment:
Q |
281 |
ttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||||||| ||||||| ||| ||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
T |
30719563 |
ttcattgctttttatatgatt--ttgcatgactattaaccctaacttcttgcaatcacataaattgatctta |
30719632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 18011554 - 18011652
Alignment:
Q |
86 |
caaactcatagttggttctggtttatgtatgttcattattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatga |
185 |
Q |
|
|
|||||||||||||||| | | |||||||||||||| | || | |||| | | |||||| || ||||||||||||||||||||| |||||| |||||||| |
|
|
T |
18011554 |
caaactcatagttggtccggatttatgtatgttcactcttatttatgcttataattgtt-agctatgagtagctaaactcttagtttgattgagccatga |
18011652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 33920673 - 33920999
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||||| | ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
33920673 |
ttttggagacctaaacagagcatagacgtcaccaggaagctgaagaacacgtggtggatctcaccaaactcatagttggttctggtttatgtatgttcat |
33920772 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
33920773 |
tattttctatgtatttgattgtttagttattagtagctaaactcttagatcgattaagtcatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
33920872 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||||| ||||||| ||||||||||||||| |||||||| |||| |||||||| ||||||||||||| |||||||||||| ||||||| |||||| |
|
|
T |
33920873 |
taagaactctctttgacatcaatgaaaacctagtctttattcagaa----ttatttgtgttcattgcttttcgtatgattgtttgcatgactattaaccc |
33920968 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|| |||||||||||||||||||||||||||| |
|
|
T |
33920969 |
tagcttctttcaatcacataaattgatctta |
33920999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 26337514 - 26337840
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
||||||||||||||| |||||||||||||||||||||| || || |||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
26337514 |
ttttggagacctaaatagagcatagacgacaccaggaagccgaataacacgcattcgatctcaccaaactcatagttggttctggtttatgtatgttcac |
26337613 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||| ||||||||||||||| |
|
|
T |
26337614 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagacgagtctttgtgatttgtcaaccatgtaatttgt |
26337713 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||||| ||||||| ||||||||||||||| |||||||| |||| |||||||| || |||||||||| ||||||||| || ||||||| |||||| |
|
|
T |
26337714 |
taagaactctctttgacatcaatgaaaacctagtctttattcagaa----ttatttgtgtttattgcttttcgtatgattgtatgaatgactattaaccc |
26337809 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|| ||||||||||||||||||||||||||| |
|
|
T |
26337810 |
tagtttctttcaatcacataaattgatctta |
26337840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 22 - 352
Target Start/End: Complemental strand, 2500594 - 2500269
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| ||| ||||||||||||||| || ||||||||||||| | |
|
|
T |
2500594 |
ttttggagacctaaacagagcatagacgacaccaggaagctgaagaacacgcagtggatctcacccaactcatagttggttgtgatttatgtatgttcta |
2500495 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||| |||| |
|
|
T |
2500494 |
ttattt-ctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatttttgtgatctgtg-agcatgtagtttg |
2500397 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||||||||| ||||||| |||||||||||||||||||||||| |||| ||||||| | | ||||||||||||||||||||||||||||||||||| |
|
|
T |
2500396 |
ttaagaactctctttgacatcaatgaaaacctaatctttattcagaa----atatttgtgcttaatgcttttcttatgattgtttgtatgactactaacc |
2500301 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
2500300 |
ctaacttctttcaatcacataaattgatctta |
2500269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 9690294 - 9690620
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
||||||||||||||||| ||||||||||| || ||||| || |||| |||||||||||||| || |||||||||||||||||||||||||||||||| | |
|
|
T |
9690294 |
ttttggagacctaaacatagcatagacgatactaggaagccgaagagcacgcattggatctcacaaaactcatagttggttctggtttatgtatgtttac |
9690393 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||| |||||||| |
|
|
T |
9690394 |
tattttctatgtatttgattgtttagttatgagtagctaaactattagattgattgagccatgagatgaatctttgtgatttgtgaaccatataatttgt |
9690493 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|| ||||| ||||||| ||||||||||||||| |||||||| | || |||||||| ||||||||||||| || ||||||||| ||||||| |||||| |
|
|
T |
9690494 |
tacgaactctctttgacatcaatgaaaacctagtctttattca----taattatttgtgttcattgcttttcgtacgattgtttgcatgactattaaccc |
9690589 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|| ||| |||||||||||||||||||||||| |
|
|
T |
9690590 |
tagcttatttcaatcacataaattgatctta |
9690620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 22 - 352
Target Start/End: Complemental strand, 33321510 - 33321185
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
||||||||||||||||| ||||||||| ||||||||| | |||||||||| ||||||| ||| |||||||||||||||||| ||||||||||||| | |
|
|
T |
33321510 |
ttttggagacctaaacatagcatagacagcaccaggaagctgaagaacacgcggtggatctcacccaactcatagttggttctgatttatgtatgttcta |
33321411 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||| |
|
|
T |
33321410 |
ttattt-ctatgtatttaattgtttagttatgagtagctaaactcttagattgattaagtcatgagatgaatctttgtgatctgtg-agcatgtaatttg |
33321313 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||||||||| ||||||| ||||||||||||| | | |||||| | || |||||||| | | ||||||||||||||||||||||||||||||||||| |
|
|
T |
33321312 |
ttaagaactctctttgacatcaatgaaaaccgagtatttattcaaaa----ttatttgtgcttaatgcttttcttatgattgtttgtatgactactaacc |
33321217 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
33321216 |
ctaacttctttcaatcacataaattgatctta |
33321185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 35433060 - 35432836
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
|||||||||||||||||||||||||||| |||||| || || |||| ||| | | ||||| ||||||||||||||||||||||||||||||||| || |
|
|
T |
35433060 |
ttttggagacctaaacagagcatagacggcaccagaaagcctaagagcacatagtagatctcaccaaactcatagttggttctggtttatgtatg-ccac |
35432962 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |
|
|
T |
35432961 |
ta-tttctatgtatttgattgtttagttatgagtaaataaactcttagattgattaagccatgggatgaatctttgtgatctgtgaaccatgtaatttat |
35432863 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaa |
248 |
Q |
|
|
|||| |||||||||||||||||| |
|
|
T |
35432862 |
ctgaaactctctttgatatcaatgaaa |
35432836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 34653096 - 34653016
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
T |
34653096 |
ttatttgtgttcattgcttttcatatgattgtttgcatgactattaaccctaacttcttgcaatcacataaattgatctta |
34653016 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 281 - 352
Target Start/End: Original strand, 3194945 - 3195016
Alignment:
Q |
281 |
ttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
T |
3194945 |
ttcattgcttttcatatgattgtttgcatgactattaaccctaacttcttgcaatcacataaattgatctta |
3195016 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 149 - 357
Target Start/End: Complemental strand, 1810868 - 1810664
Alignment:
Q |
149 |
tatgagtagctaaactcttagattgattaagccatgagatgaatct-ttgtgatctgtgaaccatgtaatttgttaagaactttctttgatatcaatgaa |
247 |
Q |
|
|
||||||||| ||| ||| |||||| || || |||||||||||||| || |||||| |||| |||| |||||||| ||| | ||||| || |||||| | |
|
|
T |
1810868 |
tatgagtagttaagctcctagattaatcgagtcatgagatgaatctattatgatctatgaatcatgaaatttgttt-gaagtctctttaat-tcaatgga |
1810771 |
T |
 |
Q |
248 |
aacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgttt-gtatgactactaaccctaacttctttcaatcacataaattg |
346 |
Q |
|
|
|||| ||||||||||||||||||| || ||||||| ||||| ||||||||||| | ||||||| ||||||||||||||| |||| |||||||||| |
|
|
T |
1810770 |
ttcctagtctttattgagaattattt----gtgttcattgtttttcatatgattgttttgcatgactattaaccctaacttcttacaattacataaattg |
1810675 |
T |
 |
Q |
347 |
atcttaaaaat |
357 |
Q |
|
|
|||||| |||| |
|
|
T |
1810674 |
atcttagaaat |
1810664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 17944428 - 17944508
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||| | |||||||||||| |||||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||| |
|
|
T |
17944428 |
ttatttatgttcattgctttttatatgattgtttgcatgactattaaccctagcttcttgcaatcacataaattgatctta |
17944508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 19685945 - 19686027
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttat--gattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||||||||| ||| ||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||| |
|
|
T |
19685945 |
ttatttgtgttcattgcttttcatatatgattgtttgcatgactattaaccctagcttcttacaatcacataaattgatctta |
19686027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 19689328 - 19689410
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttat--gattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||||||||| ||| ||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||| |
|
|
T |
19689328 |
ttatttgtgttcattgcttttcatatatgattgtttgcatgactattaaccctagcttcttacaatcacataaattgatctta |
19689410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 39 - 185
Target Start/End: Original strand, 25184941 - 25185088
Alignment:
Q |
39 |
gagcatagacgacaccaggaaaccaaagaacacgcattggatctaac-caaactcatagttggttctggtttatgtatgttcattattttctatgtattt |
137 |
Q |
|
|
||||||||| |||||||||| ||||||||||| || || |||| | | |||||||||||||| | | |||||||||||| | | || | |||| | | |
|
|
T |
25184941 |
gagcatagaagacaccaggagaccaaagaacaagccctgaatctcataccaactcatagttggtccggatttatgtatgtttactcttgtttatgcttat |
25185040 |
T |
 |
Q |
138 |
gattgtttagttatgagtagctaaactcttagattgattaagccatga |
185 |
Q |
|
|
|||||||||||||||||| | ||||||||||| |||||| |||||||| |
|
|
T |
25185041 |
gattgtttagttatgagtggttaaactcttagtttgattgagccatga |
25185088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 36330342 - 36330447
Alignment:
Q |
88 |
aactcatagttggttctggtttatgtatgttc-attattttctatgtatttgattg-tttagttatgagtagctaaactcttagattgattaagccatga |
185 |
Q |
|
|
|||||||||||||||||| ||||||||||||| |||| ||||||||| || |||| ||| ||||||||||||| | || ||||||| | ||||| |||| |
|
|
T |
36330342 |
aactcatagttggttctgatttatgtatgttctatta-tttctatgttattaattgttttggttatgagtagcttagcttttagattcactaagcaatga |
36330440 |
T |
 |
Q |
186 |
gatgaat |
192 |
Q |
|
|
||||||| |
|
|
T |
36330441 |
gatgaat |
36330447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 25185167 - 25185240
Alignment:
Q |
276 |
ttgttttcattgcttttcttatgattgtttg-tatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||| |||||||||||| ||||||||||| |||||||| |||||||| |||||| ||||||||||||||||| |
|
|
T |
25185167 |
ttgtgttcattgctttttatatgattgttttatatgactaataaccctagcttcttgcaatcacataaattgat |
25185240 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 2453114 - 2453186
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||||||| ||||||||||||| |||||||| ||||||| ||||||||||||||| ||| ||||||||||||| |
|
|
T |
2453114 |
ttatttgtattcattgcttttcatatgattgc----atgactattaaccctaacttcttgcaaccacataaattgat |
2453186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 4732169 - 4732096
Alignment:
Q |
276 |
ttgttttcattgcttttcttatgattg-tttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||| |||||||||||| ||| |||| |||||||||||| |||||||| |||||| |||| |||| ||||||| |
|
|
T |
4732169 |
ttgtgttcattgctttttatataattgctttgtatgactattaaccctagcttcttgcaattacatgaattgat |
4732096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 4732289 - 4732249
Alignment:
Q |
144 |
ttagttatgagtagctaaactcttagattgattaagccatg |
184 |
Q |
|
|
|||| ||||||||||||||||||||| |||||| ||||||| |
|
|
T |
4732289 |
ttagctatgagtagctaaactcttagtttgattgagccatg |
4732249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 22 - 352
Target Start/End: Complemental strand, 56089901 - 56089575
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
|||| ||||||||||||||||||||||| ||||||||| | |||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |
|
|
T |
56089901 |
ttttagagacctaaacagagcatagacggcaccaggaagctgaagaacacgcggtggatctcaccaaactcatagttggttctggtttatgtatgttcgc |
56089802 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |
|
|
T |
56089801 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgaaatgaatctttgtgatctgtgaatcatgtaatttgt |
56089702 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||||| ||||||| ||||||||||||||| |||||||| |||| |||||||| ||||||||||||| |||||||||||| ||||||| |||||| |
|
|
T |
56089701 |
taagaactctctttgacatcaatgaaaacctagtctttattcagaa----ttatttgtgttcattgcttttcgtatgattgtttgcatgactattaaccc |
56089606 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|| |||||||||||||||||||||||||||| |
|
|
T |
56089605 |
tagcttctttcaatcacataaattgatctta |
56089575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 13978666 - 13978991
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
||||||||||||||| |||||||||||| ||||||||| | |||||||| | ||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
T |
13978666 |
ttttggagacctaaatagagcatagacggcaccaggaagctgaagaacacacggtggatctcacccaactcatagttggttctggtttatgtatgttcgc |
13978765 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
13978766 |
tattttctatgtatt-gattgtttagttatgagtagctaaactcttagattgattaaaccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
13978864 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||||| ||||||| ||||||||||||||| |||||||| |||||||||| || | | |||||||||| ||||||||||||||||||||||||| |
|
|
T |
13978865 |
taagaactctctttgacatcaatgaaaacctagtctttattcagaattattt----gtgcttaatgcttttcttctgattgtttgtatgactactaaccc |
13978960 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|| |||||||||||||||||||||||||||| |
|
|
T |
13978961 |
tagcttctttcaatcacataaattgatctta |
13978991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 19928436 - 19928761
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
||||||||||| |||||||||||||||| ||||||||| | |||||||| | ||||||| || |||||||||||||||||||||||||||||||| |
|
|
T |
19928436 |
ttttggagaccaaaacagagcatagacggcaccaggaagctgaagaacacacggtggatctcacacaactcatagttggttctggtttatgtatgttcgc |
19928535 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
T |
19928536 |
tattttctatgtatt-gattgtttagttatgagtagctaaactcttagattgattaagtaatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
19928634 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||||| ||||||| ||||||||||||||| |||||||| |||||||||| || | | |||||||||| ||||||||||||||||||||||||| |
|
|
T |
19928635 |
taagaactctctttgacatcaatgaaaacctagtctttattcagaattattt----gtgcttaatgcttttcttctgattgtttgtatgactactaaccc |
19928730 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|| |||||||||||||||||||||||||||| |
|
|
T |
19928731 |
tagcttctttcaatcacataaattgatctta |
19928761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 22 - 352
Target Start/End: Complemental strand, 26704077 - 26703752
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
|||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||||||||||| |||||||||||||| |
|
|
T |
26704077 |
ttttagagacctaaacagagcatagacgacaccaggaaaccgcagaacacgcagtggatctcacccaactcatagttggttctaatttatgtatgttcac |
26703978 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
26703977 |
tattttctatgtatttgattgtttggttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgatgg-tgtaatttgt |
26703879 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||||| ||||| | ||||||||||||||| |||||||| |||||||||| || | | |||||||||||||||||||||||||||||||||| | |
|
|
T |
26703878 |
taagaactctctttaacatcaatgaaaacctagtctttattcagaattattt----gtgcttaatgcttttcttatgattgtttgtatgactactaactc |
26703783 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|| ||||||||||||| |||||||||||||| |
|
|
T |
26703782 |
tagcttctttcaatcatataaattgatctta |
26703752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 15850705 - 15851030
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
|||||||||||| || ||||||||||| |||||||||| | ||||||||||| ||||||| ||| |||||||||||||||||| | ||||||||||| | |
|
|
T |
15850705 |
ttttggagacctcaatagagcatagacaacaccaggaagctgaagaacacgcagtggatctcacccaactcatagttggttctgatatatgtatgttcta |
15850804 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
T |
15850805 |
tta-tttctatgtatttgattgtttagttataagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaa-catgtaatttg |
15850902 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||||||||| ||||||| ||||||||||||||| |||||||| | || |||||||| | | ||||||||||||||||||||||||||||| ||||| |
|
|
T |
15850903 |
ttaagaactctctttgacatcaatgaaaacctagtctttattcaaaa----ttatttgtgcttaatgcttttcttatgattgtttgtatgactaataacc |
15850998 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||||||||||||||||||||||||| |||||| |
|
|
T |
15850999 |
ctaacttctttcaatcacataaatttatctta |
15851030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 352
Target Start/End: Complemental strand, 11702926 - 11702848
Alignment:
Q |
274 |
atttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||| ||||||||||||| |||||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||| |
|
|
T |
11702926 |
atttgtgttcattgcttttcatatgattgtttgcatgactattaaccctagcttcttgcaatcacataaattgatctta |
11702848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 10385728 - 10385808
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||||||||| |||||||| ||| ||||||| |||||||| |||||| ||||||||||||||||||||| |
|
|
T |
10385728 |
ttatttgtgttcattgcttttcatatgattgcttgcatgactattaaccctagcttcttgcaatcacataaattgatctta |
10385808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 350
Target Start/End: Original strand, 23652935 - 23653136
Alignment:
Q |
137 |
tgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatct-ttgtgatctgtgaaccatgtaatttgttaagaactttcttt |
235 |
Q |
|
|
|||||||||||||||||||| |||||||||||| |||||| |||||||| |||| || |||| || ||||||||| ||| || ||||| ||||| |
|
|
T |
23652935 |
tgattgtttagttatgagtatctaaactcttagtttgattgagccatga--tgaacctattgtaatatgtgaaccaagtagtt------gaactctcttt |
23653026 |
T |
 |
Q |
236 |
gatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaat |
335 |
Q |
|
|
|||||||| | | |||||||||| |||||||||| || |||||||||||| ||||||||||||| ||||||| ||| |||||||||||||||| |
|
|
T |
23653027 |
attatcaatgttattc-aatctttattcagaattattt----gtgttcattgcttttattatgattgtttgcatgactattaaacctaacttctttcaat |
23653121 |
T |
 |
Q |
336 |
cacataaattgatct |
350 |
Q |
|
|
|| | ||||||||| |
|
|
T |
23653122 |
catgttaattgatct |
23653136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 33400661 - 33400593
Alignment:
Q |
284 |
attgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||||| |||||||||||| |||||| |||||||| |||||| ||||||||||||||||||||| |
|
|
T |
33400661 |
attgcttttcatatgattgtttgcttgactattaaccctagcttcttgcaatcacataaattgatctta |
33400593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 272 - 331
Target Start/End: Original strand, 11560591 - 11560650
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttcttt |
331 |
Q |
|
|
|||||||| |||||||||||| ||||||||||||| ||||||| |||||||||||||||| |
|
|
T |
11560591 |
ttatttgtgttcattgcttttattatgattgtttgcatgactattaaccctaacttcttt |
11560650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 352
Target Start/End: Original strand, 10247625 - 10247678
Alignment:
Q |
299 |
attgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
T |
10247625 |
attgtttgcatgactattaaccctaacttcttacaatcacataaattgatctta |
10247678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 11560470 - 11560506
Alignment:
Q |
140 |
ttgtttagttatgagtagctaaactcttagattgatt |
176 |
Q |
|
|
|||||||||||||||||||||||||||| | |||||| |
|
|
T |
11560470 |
ttgtttagttatgagtagctaaactcttggtttgatt |
11560506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 5827558 - 5827884
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
||||| ||||||||| |||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |
|
|
T |
5827558 |
ttttgaagacctaaatagagcatagacgacactaggaagccgaagaacacgcattggatctcaccaaactcatagttggttttggtttatgtatgttcac |
5827657 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
5827658 |
tattttctatgtatttgattgtttagttatgagtggctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtagtttgt |
5827757 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||| | ||||| | ||||| ||||||||| |||||||| |||| |||||||| |||||||||||||||||||||||||| |||||| |||||| |
|
|
T |
5827758 |
taagaattctcttttacatcaaagaaaacctagtctttattcagaa----ttatttgtgttcattgcttttcttatgattgtttgcttgactattaaccc |
5827853 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|| ||||||||||||||||||||| |||||| |
|
|
T |
5827854 |
tagcttctttcaatcacataaattaatctta |
5827884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 9466661 - 9466985
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
|||||||||||||||||||||||||||| || |||||| | |||||||| || ||||||| ||| |||||||||||| ||||| |||||||||||| || |
|
|
T |
9466661 |
ttttggagacctaaacagagcatagacggcaacaggaagctgaagaacacacagtggatctcacccaactcatagttgcttctgatttatgtatgtt-at |
9466759 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || | |||||||||||| |
|
|
T |
9466760 |
attattctatgtatttgattgtttagttatgagtagctaaactcttaaattgattaagccatgagatgaatctttgtgatctttg-agcatgtaatttgt |
9466858 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||||| ||||||| ||||||||||| | | |||||||| | || |||||||| | | |||||||||||||||||||||||||||||||||||| |
|
|
T |
9466859 |
taagaactctctttgacatcaatgaaaaaccagtctttattca----taattatttgtgcttaatgcttttcttatgattgtttgtatgactactaaccc |
9466954 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
9466955 |
taacttctttcaatcacataaattgatctta |
9466985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 13331621 - 13331946
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||| | |||||||||| ||||||| ||| ||||||||| |||||||| |||| |||||||| | |
|
|
T |
13331621 |
ttttggagacctaaacaaagcatagacgacaccaggaagctgaagaacacgcggtggatctcacccaactcatagctggttctgatttacgtatgttcta |
13331720 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
||| ||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| | | ||||||||||| |
|
|
T |
13331721 |
tta-tttatatgtatttgattgtttagttatgcgtagctaaactcttggattgattaagccatgagatgaatctttgtgatctgcg-agcatgtaatttg |
13331818 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaacc |
320 |
Q |
|
|
||||||||| ||||||| ||||||||||||||| |||||||| | || |||||||| | | ||||||||||||||||||| ||||||||||||||| |
|
|
T |
13331819 |
ttaagaactctctttgacatcaatgaaaacctagtctttattca----taattatttgtgcttaatgcttttcttatgattgttcgtatgactactaacc |
13331914 |
T |
 |
Q |
321 |
ctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||| |||||||||||||||||||||||||||| |
|
|
T |
13331915 |
ctagcttctttcaatcacataaattgatctta |
13331946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 22 - 352
Target Start/End: Complemental strand, 39660547 - 39660218
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttat----gtatgt |
117 |
Q |
|
|
|||||||||||||||||||||| ||||| || |||||| | |||||| ||| ||||||| ||| |||||||||| |||||| ||||| |||||| |
|
|
T |
39660547 |
ttttggagacctaaacagagcaaagacggcatcaggaagctgaagaacgcgcggtggatctcacccaactcatagtacgttctgatttatatatgtatgt |
39660448 |
T |
 |
Q |
118 |
tc-attattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaa |
216 |
Q |
|
|
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||| ||| | |||||| |
|
|
T |
39660447 |
tctattattt-ctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagtcacgagatgaatctttatgatctatgagc-atgtaa |
39660350 |
T |
 |
Q |
217 |
tttgttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactact |
316 |
Q |
|
|
||||||||||||| ||||||| ||||||||||||||| |||||||| |||||||||| || | | ||||||||||||||||||||||||||||||| |
|
|
T |
39660349 |
tttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattattt----gtgcttaatgcttttcttatgattgtttgtatgactact |
39660254 |
T |
 |
Q |
317 |
aaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| |
|
|
T |
39660253 |
aaccctaacttctttcaatcacataaattgatctta |
39660218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 30645251 - 30645331
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| |||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
T |
30645251 |
ttatttgtgttcattgcttttgatatgattgtttgcatgactattaaccctaacttcttacaatcacataaattgatctta |
30645331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 31984766 - 31984847
Alignment:
Q |
271 |
tttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||||||||| ||||||||||||| |||||||| ||| ||||||| ||||| || |||||| ||||||||||||||||||||| |
|
|
T |
31984766 |
tttatttgtattcattgcttttcatatgattggttgcatgactattaaccatagcttcttacaatcacataaattgatctta |
31984847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 31981126 - 31981202
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||||||| ||||||| ||||| ||||||||||| ||||||| ||||| || |||||| ||||||||||||||||| |
|
|
T |
31981126 |
ttatttgtgttcattgattttcatatgattgtttcaatgactattaaccatagcttcttacaatcacataaattgat |
31981202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 352
Target Start/End: Complemental strand, 27863892 - 27863815
Alignment:
Q |
276 |
ttgttttcattgcttttcttatgattgttt-gtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||| |||||||||||| ||||||||||| ||||||||| |||||||| |||||| |||| |||| ||||||||||| |
|
|
T |
27863892 |
ttgtgttcattgctttttatatgattgttttgtatgactattaaccctagcttcttgcaattacatgaattgatctta |
27863815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 14627143 - 14627231
Alignment:
Q |
187 |
atgaatct-ttgtgatctgtgaaccatgtaatttgttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttat |
275 |
Q |
|
|
|||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||||| || ||||| | |||||||||| |
|
|
T |
14627143 |
atgaatctattgtaatctgtgaaccatgtaatttgtt-tgaactccctttgatatcattggaaacctagtcattattcataattatttat |
14627231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 14187782 - 14187855
Alignment:
Q |
276 |
ttgttttcattgcttttcttatgattg-tttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||| |||||||||||| ||| |||| |||||||||||| |||||||||||||| |||| |||| ||||||| |
|
|
T |
14187782 |
ttgtgttcattgctttttatataattgctttgtatgactataaaccctaacttcttgcaattacatgaattgat |
14187855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 22653923 - 22653964
Alignment:
Q |
144 |
ttagttatgagtagctaaactcttagattgattaagccatga |
185 |
Q |
|
|
|||| ||||||||||||||||||||| |||||| |||||||| |
|
|
T |
22653923 |
ttagctatgagtagctaaactcttagtttgattgagccatga |
22653964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 22654043 - 22654116
Alignment:
Q |
276 |
ttgttttcattgcttttcttatgattg-tttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||| |||||||||||| ||| |||| |||||||||||| |||||||| |||||| |||| |||| ||||||| |
|
|
T |
22654043 |
ttgtgttcattgctttttatattattgctttgtatgactattaaccctagcttcttgcaattacatgaattgat |
22654116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 20262338 - 20262409
Alignment:
Q |
276 |
ttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||| ||||||||||| | ||| |||| ||||||||||| ||||||||||||||| ||| |||| ||||||| |
|
|
T |
20262338 |
ttgtgttcattgcttt-catataattgcttgtatgactattaaccctaacttcttgaaattacatgaattgat |
20262409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 21048968 - 21049039
Alignment:
Q |
276 |
ttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgat |
348 |
Q |
|
|
|||| ||||||||||| | ||| |||| ||||||||||| ||||||||||||||| ||| |||| ||||||| |
|
|
T |
21048968 |
ttgtgttcattgcttt-catataattgcttgtatgactattaaccctaacttcttgaaattacatgaattgat |
21049039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0911 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: scaffold0911
Description:
Target: scaffold0911; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 19 - 352
Target Start/End: Original strand, 4093 - 4420
Alignment:
Q |
19 |
gatttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgtt |
118 |
Q |
|
|
|||||||||||||||||||| |||||||||| ||||| ||| | |||||||||||| ||||||| |||||||||||||||||||||||||||| ||||| |
|
|
T |
4093 |
gatttttggagacctaaacaaagcatagacggcaccaagaagctaaagaacacgcagtggatctcgccaaactcatagttggttctggtttatgcatgtt |
4192 |
T |
 |
Q |
119 |
cattattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatt |
218 |
Q |
|
|
| || |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
4193 |
cgctaatttctatgtatttgattgtttagttatgagacgctaaactcttagatagattaagccatgagatgaatctttgtgatctgtgaaccatgtaatt |
4292 |
T |
 |
Q |
219 |
tgttaagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaa |
318 |
Q |
|
|
||||||||||| ||||||| ||||||||||||||| |||||||| ||||||||| | | | |||||||||||||||||||||||||||||||||| |
|
|
T |
4293 |
tgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatt------tgtgctttgcttttcttatgattgtttgtatgactactaa |
4386 |
T |
 |
Q |
319 |
ccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||||| |||||||||||||||||||||||||||| |
|
|
T |
4387 |
ccctagcttctttcaatcacataaattgatctta |
4420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0401 (Bit Score: 218; Significance: 1e-119; HSPs: 1)
Name: scaffold0401
Description:
Target: scaffold0401; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 3790 - 4116
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
||||||||||||||| |||| |||||||| ||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
T |
3790 |
ttttggagacctaaatagagtgtagacgacgccaggaagccgaagaacacgcattggatctcaccaaactcatagttggttctggtttatgtatgtttac |
3889 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||| ||||||||||||||| |
|
|
T |
3890 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattaattaagccatgagaagaatctttgtgatatgtaaaccatgtaatttgt |
3989 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||||| ||||||| ||||||||||||||| |||||||| |||| |||||||| ||||||| ||||| |||||||| ||| ||||||| |||||| |
|
|
T |
3990 |
taagaactctctttgacatcaatgaaaacctagtctttattcagaa----ttatttgtgttcattggttttcgtatgattggttgcatgactattaaccc |
4085 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|| |||||||||||||||||||||||||||| |
|
|
T |
4086 |
tagcttctttcaatcacataaattgatctta |
4116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 218; Significance: 1e-119; HSPs: 2)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 28853 - 29179
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
|||||| ||||||| |||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |
|
|
T |
28853 |
ttttggggacctaattagagcatagacgacaccaggaagtcgaagaacacgcattggatctcaccaaactcatagttggttatggtttatgtatgttcac |
28952 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28953 |
tattttctatgtatttgattatttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
29052 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||||| ||||||| ||||||||||||||| |||||||| |||||||||| || |||| | ||||| |||||||| ||| ||||||| ||| || |
|
|
T |
29053 |
taagaactctctttgacatcaatgaaaacctagtctttattcagaattattt----gtgttcaaagattttcatatgattgattgcatgactattaaacc |
29148 |
T |
 |
Q |
322 |
taacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|| |||||||||||||||||||||||||||| |
|
|
T |
29149 |
tagcttctttcaatcacataaattgatctta |
29179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 25 - 352
Target Start/End: Original strand, 52653 - 52976
Alignment:
Q |
25 |
tggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcattat |
124 |
Q |
|
|
||||||||||||||||||||||||| ||||||||| | |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| ||| |
|
|
T |
52653 |
tggagacctaaacagagcatagacggcaccaggaagctgaagaacacgcggtggatctcaccaaactcatagttggttcaggtttatgtatgttcgctat |
52752 |
T |
 |
Q |
125 |
tttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgttaa |
224 |
Q |
|
|
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
52753 |
tttctatttatttgattatttagttatgagtagctaaactcttagattgattaagacatgagatgtatctttgtgatctgtgaaccatgtaatttgttaa |
52852 |
T |
 |
Q |
225 |
gaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaa |
324 |
Q |
|
|
||||| ||||||| ||||||||||||||| |||||||| |||||||||| || |||| ||||||| |||||||||||| ||||||| ||| |||| |
|
|
T |
52853 |
gaactctctttgacatcaatgaaaacctagtctttattcagaattattt----gtgttcaaagcttttcgtatgattgtttgcatgactattaatcctag |
52948 |
T |
 |
Q |
325 |
cttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||||||||||||||||||||||| |
|
|
T |
52949 |
cttctttcaatcacataaattgatctta |
52976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0273 (Bit Score: 213; Significance: 1e-116; HSPs: 1)
Name: scaffold0273
Description:
Target: scaffold0273; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 22 - 323
Target Start/End: Complemental strand, 20272 - 19975
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttcat |
121 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
T |
20272 |
ttttggagacctaaacagagcatagacgacaccaggaagctgaagaacatgcagtggatctcacccaactcatagttggttctggtttatgtatgttcga |
20173 |
T |
 |
Q |
122 |
tattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
221 |
Q |
|
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
20172 |
tattttctatgtatttgattttttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttgt |
20073 |
T |
 |
Q |
222 |
taagaactttctttgatatcaatgaaaacctaatctttattgagaattatttatttgttttcattgcttttcttatgattgtttgtatgactactaaccc |
321 |
Q |
|
|
|||||||| ||||||| ||||||||||||||| |||||||| |||||||||| || | | |||||||||||||||||||||||||||||||||||| |
|
|
T |
20072 |
taagaactctctttgacatcaatgaaaacctagtctttattcagaattattt----gtgcttaatgcttttcttatgattgtttgtatgactactaaccc |
19977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0637 (Bit Score: 135; Significance: 3e-70; HSPs: 5)
Name: scaffold0637
Description:
Target: scaffold0637; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 22 - 259
Target Start/End: Original strand, 1791 - 2027
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
|||||||||||||||||||||| |||||| |||||||| | |||||||||||| ||||| | ||| |||||||| |||||| || |||| |||||||| | |
|
|
T |
1791 |
ttttggagacctaaacagagcagagacgataccaggaagctaaagaacacgcaatggatttcacccaactcataattggttttgatttaagtatgttcta |
1890 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagttatgagtagctaaactcttagattgattaagccatgagatgaatctttgtgatctgtgaaccatgtaatttg |
220 |
Q |
|
|
||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| | ||||||||||| |
|
|
T |
1891 |
tta-tttctatgcatttgattgtttagttatgagtagctaaactcttagattgatgaagccatgagatgaatctttatgatctgtg-agcatgtaatttg |
1988 |
T |
 |
Q |
221 |
ttaagaactttctttgatatcaatgaaaacctaatcttt |
259 |
Q |
|
|
||||||||| ||||||| || |||||||||||| ||||| |
|
|
T |
1989 |
ttaagaactctctttgacataaatgaaaacctattcttt |
2027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0637; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 981 - 1108
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
||||||||||||||||||||||| |||||||| ||||| | ||||||||||| ||||| | ||| |||| |||||||||| || ||||||||||||| | |
|
|
T |
981 |
ttttggagacctaaacagagcatggacgacactaggaagctgaagaacacgcaatggatttcacccaacttatagttggttttgatttatgtatgttcta |
1080 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagtt |
149 |
Q |
|
|
||||||| |||| |||||||||||||||| |
|
|
T |
1081 |
ttatttt-tatgcatttgattgtttagtt |
1108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0637; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 1527 - 1648
Alignment:
Q |
28 |
agacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-attattt |
126 |
Q |
|
|
|||||||||| ||||||||||||||||||||| | ||||||||||| ||||| | ||| |||| |||||||||| || ||| ||||||||| |||| || |
|
|
T |
1527 |
agacctaaaccgagcatagacgacaccaggaagctgaagaacacgcaatggatttcacccaacttatagttggttttgatttgtgtatgttctatta-tt |
1625 |
T |
 |
Q |
127 |
tctatgtatttgattgtttagtt |
149 |
Q |
|
|
|||||| |||||||||||||||| |
|
|
T |
1626 |
tctatgcatttgattgtttagtt |
1648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0637; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 711 - 838
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
||||||||||||||| |||||||| |||||||||||| | ||||||||||| ||||| | ||| |||||| |||||||| || ||||||||||||| | |
|
|
T |
711 |
ttttggagacctaaagagagcataaacgacaccaggaggctgaagaacacgcaatggatttcacccaactcaaagttggttttgatttatgtatgttcta |
810 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagtt |
149 |
Q |
|
|
||| |||| ||| |||||||||||||||| |
|
|
T |
811 |
tta-tttccatgcatttgattgtttagtt |
838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0637; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 1251 - 1378
Alignment:
Q |
22 |
ttttggagacctaaacagagcatagacgacaccaggaaaccaaagaacacgcattggatctaaccaaactcatagttggttctggtttatgtatgttc-a |
120 |
Q |
|
|
||||||||||||||| |||||||||||||||| ||||| | ||||| ||||| | ||| | ||| ||||| ||||||||| || ||||||||||||| | |
|
|
T |
1251 |
ttttggagacctaaatagagcatagacgacactaggaagctgaagaatacgcaatagatttcacccaactcgtagttggttttgatttatgtatgttcta |
1350 |
T |
 |
Q |
121 |
ttattttctatgtatttgattgtttagtt |
149 |
Q |
|
|
||| |||||||| |||||||||||||||| |
|
|
T |
1351 |
tta-tttctatgcatttgattgtttagtt |
1378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0134 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0134
Description:
Target: scaffold0134; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 357
Target Start/End: Original strand, 7015 - 7100
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatcttaaaaat |
357 |
Q |
|
|
|||||| | |||||||||||| |||||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||| |||| |
|
|
T |
7015 |
ttatttatgttcattgctttttatatgattgtttgcatgactattaaccctagcttcttgcaatcacataaattgatcttagaaat |
7100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 227124 - 227205
Alignment:
Q |
271 |
tttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
||||||||| ||||||||||||| |||||||| ||| ||||||| ||||| || |||||| ||||||||||||||||||||| |
|
|
T |
227124 |
tttatttgtattcattgcttttcatatgattggttgcatgactattaaccatagcttcttacaatcacataaattgatctta |
227205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0214 (Bit Score: 49; Significance: 7e-19; HSPs: 3)
Name: scaffold0214
Description:
Target: scaffold0214; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 13384 - 13464
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| || | |||||||| ||||||| |||| ||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
T |
13384 |
ttatttgtgttaactgcttttcatatgattttttgcatgactattaaccctaacttcttacaatcacataaattgatctta |
13464 |
T |
 |
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Target: scaffold0214; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 27400 - 27480
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| || | |||||||| ||||||| |||| ||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
T |
27400 |
ttatttgtgttaactgcttttcatatgattttttgcatgactattaaccctaacttcttacaatcacataaattgatctta |
27480 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0214; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 19835 - 19913
Alignment:
Q |
272 |
ttatttgttttcattgcttttcttatgattgtttgtatgactactaaccctaacttctttcaatcacataaattgatctta |
352 |
Q |
|
|
|||||||| ||||| |||||| ||| |||||||| ||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
T |
19835 |
ttatttgtgttcat--cttttcatattattgtttgcatgactattaaccctaacttcttacaatcacataaattgatctta |
19913 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 468965 - 468871
Alignment:
Q |
88 |
aactcatagttggttctggtttatgtatgttc-attattttctatgtatttgattgt-ttagttatgagtagctaaactcttagattgattaagcc |
181 |
Q |
|
|
|||||||||||||| ||| |||||||||||| |||||| |||||| || ||||| ||||||| |||||||||| || |||||||||||||||| |
|
|
T |
468965 |
aactcatagttggtcctgatttatgtatgttttattattc-ctatgttgttaattgtcttagttaagagtagctaagcttttagattgattaagcc |
468871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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