View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0883_low_8 (Length: 414)

Name: NF0883_low_8
Description: NF0883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0883_low_8
NF0883_low_8
[»] chr3 (48 HSPs)
chr3 (214-414)||(1321161-1321361)
chr3 (213-413)||(26720267-26720467)
chr3 (213-414)||(5522952-5523153)
chr3 (215-412)||(5191374-5191571)
chr3 (213-413)||(10956365-10956564)
chr3 (213-414)||(18099507-18099708)
chr3 (213-414)||(22114642-22114843)
chr3 (214-414)||(32264380-32264580)
chr3 (214-412)||(24176999-24177197)
chr3 (214-331)||(11162891-11163008)
chr3 (307-413)||(10958661-10958767)
chr3 (213-329)||(11170144-11170260)
chr3 (213-345)||(18097291-18097423)
chr3 (337-414)||(10084730-10084807)
chr3 (213-400)||(38210066-38210252)
chr3 (337-414)||(10191650-10191727)
chr3 (214-413)||(53896556-53896754)
chr3 (214-400)||(50493676-50493861)
chr3 (300-413)||(25388683-25388795)
chr3 (247-413)||(5899492-5899657)
chr3 (213-304)||(32218835-32218926)
chr3 (316-414)||(3859350-3859448)
chr3 (213-413)||(6063808-6064007)
chr3 (245-343)||(10192401-10192498)
chr3 (307-414)||(45882752-45882859)
chr3 (299-413)||(5886069-5886182)
chr3 (338-414)||(18162508-18162584)
chr3 (245-343)||(10085481-10085578)
chr3 (214-304)||(48362096-48362186)
chr3 (340-412)||(32218941-32219013)
chr3 (214-331)||(35777163-35777280)
chr3 (338-413)||(38889861-38889936)
chr3 (352-414)||(11170262-11170324)
chr3 (338-413)||(6719471-6719546)
chr3 (247-331)||(6719532-6719618)
chr3 (338-413)||(35777266-35777340)
chr3 (339-414)||(48362007-48362082)
chr3 (356-414)||(11163012-11163070)
chr3 (339-412)||(24979552-24979625)
chr3 (363-412)||(46966974-46967023)
chr3 (213-292)||(7606886-7606964)
chr3 (363-414)||(18097238-18097289)
chr3 (214-331)||(38889757-38889875)
chr3 (369-414)||(12268303-12268348)
chr3 (367-412)||(13893267-13893311)
chr3 (381-414)||(15780747-15780780)
chr3 (214-259)||(18162405-18162450)
chr3 (214-259)||(45882659-45882704)
[»] chr2 (24 HSPs)
chr2 (214-414)||(42064231-42064431)
chr2 (213-414)||(21521034-21521235)
chr2 (213-414)||(27104514-27104715)
chr2 (217-414)||(6259154-6259351)
chr2 (303-412)||(13910385-13910494)
chr2 (213-414)||(24162551-24162753)
chr2 (213-412)||(19502352-19502551)
chr2 (214-413)||(22407749-22407948)
chr2 (214-412)||(19504686-19504884)
chr2 (213-414)||(40032397-40032587)
chr2 (213-400)||(36559173-36559359)
chr2 (213-331)||(43623968-43624086)
chr2 (219-331)||(6264546-6264658)
chr2 (213-331)||(18800702-18800820)
chr2 (214-400)||(45332490-45332675)
chr2 (214-352)||(36561539-36561677)
chr2 (338-414)||(6264484-6264560)
chr2 (317-400)||(36561450-36561532)
chr2 (325-414)||(22287675-22287764)
chr2 (367-411)||(18800644-18800688)
chr2 (338-413)||(43623908-43623982)
chr2 (308-412)||(35107110-35107214)
chr2 (317-352)||(36561518-36561553)
chr2 (367-412)||(28462627-28462671)
[»] chr4 (40 HSPs)
chr4 (214-414)||(31849938-31850138)
chr4 (217-414)||(5198217-5198414)
chr4 (213-414)||(38408992-38409193)
chr4 (218-413)||(24888594-24888789)
chr4 (213-414)||(22044729-22044931)
chr4 (213-414)||(36919926-36920126)
chr4 (214-414)||(9148054-9148245)
chr4 (213-413)||(3824913-3825113)
chr4 (214-414)||(5637808-5638006)
chr4 (213-414)||(48486112-48486313)
chr4 (213-413)||(11006581-11006782)
chr4 (214-414)||(36921834-36922033)
chr4 (246-414)||(22803073-22803240)
chr4 (212-413)||(18846921-18847124)
chr4 (216-414)||(51015042-51015240)
chr4 (213-413)||(9174486-9174685)
chr4 (214-413)||(9176836-9177035)
chr4 (299-413)||(11008932-11009046)
chr4 (214-411)||(619789-619986)
chr4 (301-414)||(22047024-22047135)
chr4 (218-413)||(37089714-37089910)
chr4 (216-414)||(40091754-40091952)
chr4 (213-400)||(16932175-16932361)
chr4 (268-414)||(24880299-24880445)
chr4 (338-414)||(11434873-11434949)
chr4 (267-414)||(24878836-24878983)
chr4 (214-400)||(16934529-16934714)
chr4 (214-400)||(22783132-22783317)
chr4 (213-400)||(22780767-22780953)
chr4 (319-412)||(52942788-52942881)
chr4 (219-352)||(52942869-52943002)
chr4 (214-331)||(7941133-7941251)
chr4 (246-331)||(22801262-22801347)
chr4 (213-292)||(22048498-22048576)
chr4 (214-331)||(11434769-11434887)
chr4 (341-414)||(7941240-7941313)
chr4 (340-413)||(47274647-47274720)
chr4 (338-414)||(22801201-22801276)
chr4 (152-206)||(53773990-53774044)
chr4 (350-407)||(8756596-8756653)
[»] chr7 (25 HSPs)
chr7 (213-414)||(35378-35579)
chr7 (213-414)||(44313-44514)
chr7 (214-414)||(25542281-25542481)
chr7 (214-414)||(3878322-3878521)
chr7 (87-213)||(6865584-6865710)
chr7 (214-414)||(27306568-27306767)
chr7 (214-328)||(1049699-1049813)
chr7 (214-414)||(18567363-18567563)
chr7 (214-414)||(31435386-31435586)
chr7 (213-400)||(1047318-1047504)
chr7 (214-400)||(2935070-2935255)
chr7 (213-400)||(22136877-22137063)
chr7 (213-400)||(40551904-40552090)
chr7 (214-400)||(9027502-9027687)
chr7 (213-331)||(26804344-26804462)
chr7 (213-400)||(22107866-22108052)
chr7 (213-400)||(40549626-40549812)
chr7 (338-412)||(40837083-40837158)
chr7 (338-414)||(1049634-1049710)
chr7 (310-414)||(22392319-22392423)
chr7 (214-331)||(40837144-40837261)
chr7 (364-412)||(45366446-45366494)
chr7 (95-213)||(661389-661508)
chr7 (356-414)||(26804466-26804523)
chr7 (155-205)||(22087824-22087874)
[»] chr1 (36 HSPs)
chr1 (214-414)||(15823286-15823486)
chr1 (214-414)||(28840418-28840618)
chr1 (212-414)||(10400169-10400371)
chr1 (213-414)||(28842232-28842433)
chr1 (213-414)||(13761576-13761777)
chr1 (214-414)||(51749778-51749979)
chr1 (213-414)||(51752103-51752305)
chr1 (213-412)||(20302197-20302397)
chr1 (246-414)||(6823655-6823824)
chr1 (213-414)||(3579959-3580160)
chr1 (247-414)||(13214854-13215021)
chr1 (213-414)||(30790735-30790936)
chr1 (213-412)||(47177077-47177274)
chr1 (211-412)||(16225884-16226083)
chr1 (214-412)||(39462258-39462457)
chr1 (213-412)||(47179427-47179625)
chr1 (271-414)||(28207407-28207550)
chr1 (271-414)||(41646717-41646860)
chr1 (213-331)||(6822774-6822893)
chr1 (214-352)||(23783238-23783376)
chr1 (214-331)||(49687301-49687418)
chr1 (216-292)||(38925920-38925996)
chr1 (334-414)||(47451508-47451588)
chr1 (214-305)||(47451405-47451496)
chr1 (339-414)||(49687405-49687480)
chr1 (338-414)||(6822879-6822955)
chr1 (317-400)||(23783362-23783444)
chr1 (246-331)||(16231373-16231458)
chr1 (214-259)||(13461347-13461392)
chr1 (339-412)||(14098313-14098385)
chr1 (213-281)||(14098443-14098511)
chr1 (341-414)||(38925819-38925892)
chr1 (214-259)||(41646681-41646726)
chr1 (338-413)||(16231444-16231518)
chr1 (214-319)||(20291280-20291386)
chr1 (219-259)||(28207541-28207581)
[»] chr8 (17 HSPs)
chr8 (214-414)||(12517365-12517565)
chr8 (213-414)||(27826781-27826982)
chr8 (213-414)||(27829092-27829293)
chr8 (218-414)||(14807552-14807747)
chr8 (213-413)||(44720616-44720816)
chr8 (213-414)||(15072505-15072706)
chr8 (218-352)||(28251988-28252122)
chr8 (213-414)||(15067776-15067977)
chr8 (214-414)||(4423835-4424014)
chr8 (213-409)||(18812667-18812862)
chr8 (214-409)||(18810483-18810677)
chr8 (213-361)||(43079346-43079494)
chr8 (213-353)||(43081721-43081861)
chr8 (338-414)||(3886257-3886336)
chr8 (358-414)||(28251906-28251961)
chr8 (340-414)||(2468437-2468511)
chr8 (262-331)||(3886322-3886392)
[»] chr5 (40 HSPs)
chr5 (214-414)||(16775897-16776097)
chr5 (214-414)||(38881845-38882045)
chr5 (218-414)||(4236374-4236569)
chr5 (306-413)||(21684801-21684908)
chr5 (213-414)||(21947769-21947967)
chr5 (213-409)||(34477438-34477633)
chr5 (214-414)||(20507801-20508001)
chr5 (213-331)||(659712-659829)
chr5 (213-413)||(31544797-31544997)
chr5 (214-400)||(31542442-31542628)
chr5 (213-400)||(15354880-15355066)
chr5 (213-400)||(15357156-15357342)
chr5 (338-414)||(2174783-2174859)
chr5 (214-400)||(10749505-10749690)
chr5 (213-347)||(20504319-20504453)
chr5 (213-400)||(10756959-10757145)
chr5 (213-331)||(31466379-31466497)
chr5 (213-400)||(23667108-23667294)
chr5 (214-400)||(23664834-23665019)
chr5 (214-400)||(23793568-23793753)
chr5 (342-413)||(39797956-39798027)
chr5 (269-347)||(659852-659929)
chr5 (338-414)||(25921812-25921888)
chr5 (213-331)||(34479855-34479973)
chr5 (214-304)||(18186497-18186587)
chr5 (213-330)||(12556325-12556442)
chr5 (214-331)||(25921874-25921992)
chr5 (214-331)||(2174680-2174797)
chr5 (214-331)||(2818729-2818847)
chr5 (339-412)||(6756359-6756432)
chr5 (307-400)||(31179769-31179861)
chr5 (214-331)||(39797849-39797966)
chr5 (339-414)||(36402667-36402741)
chr5 (358-414)||(2818675-2818731)
chr5 (211-278)||(21684905-21684972)
chr5 (216-331)||(6756257-6756372)
chr5 (339-414)||(12556262-12556337)
chr5 (379-414)||(31466317-31466352)
chr5 (214-254)||(661246-661286)
chr5 (309-353)||(23742212-23742256)
[»] scaffold0250 (1 HSPs)
scaffold0250 (213-414)||(2628-2829)
[»] chr6 (23 HSPs)
chr6 (214-414)||(15530461-15530661)
chr6 (213-412)||(19227749-19227949)
chr6 (214-414)||(8995255-8995454)
chr6 (214-414)||(9019702-9019901)
chr6 (214-414)||(14507514-14507716)
chr6 (213-411)||(11983371-11983567)
chr6 (271-409)||(4816612-4816749)
chr6 (213-400)||(33308684-33308870)
chr6 (213-400)||(33310953-33311139)
chr6 (213-400)||(26066426-26066612)
chr6 (297-414)||(30729167-30729284)
chr6 (214-400)||(29755094-29755279)
chr6 (214-400)||(26068697-26068882)
chr6 (214-331)||(32279794-32279910)
chr6 (214-304)||(1072305-1072395)
chr6 (315-413)||(24192635-24192733)
chr6 (307-412)||(15541481-15541586)
chr6 (297-412)||(15533022-15533137)
chr6 (339-414)||(32279897-32279972)
chr6 (315-413)||(24191538-24191636)
chr6 (359-413)||(1072217-1072271)
chr6 (213-259)||(15533175-15533221)
chr6 (214-259)||(15541634-15541679)
[»] scaffold0025 (2 HSPs)
scaffold0025 (213-414)||(69634-69834)
scaffold0025 (213-412)||(73368-73545)
[»] scaffold0131 (1 HSPs)
scaffold0131 (215-414)||(14768-14968)
[»] scaffold0068 (2 HSPs)
scaffold0068 (306-413)||(29002-29109)
scaffold0068 (211-278)||(28938-29005)
[»] scaffold0472 (1 HSPs)
scaffold0472 (214-413)||(5927-6125)
[»] scaffold0140 (2 HSPs)
scaffold0140 (213-400)||(21914-22100)
scaffold0140 (213-400)||(24189-24375)
[»] scaffold0127 (1 HSPs)
scaffold0127 (214-400)||(12869-13054)
[»] scaffold0339 (1 HSPs)
scaffold0339 (340-413)||(3872-3945)


Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 1321161 - 1321361
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  1321161 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgattgctgggcaacgtggcacgattagaggtttcaagtttgaggcaaagcactgaa 1321260  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1321261 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 1321360  T
Q  414 g 414  Q
    |    
T  1321361 g 1321361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 213 - 413
Target Start/End: Original strand, 26720267 - 26720467
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  26720267 ttgtgagagttaacttaaaatcaggatctgcaggaatcgtggcacgatggctgagcaacgtggcaggattggaggtttcaagtttgaggcaaagcactgg 26720366  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26720367 aaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatattttttagtgcagatttgttccaaattttaag 26720466  T
Q  413 c 413  Q
    |    
T  26720467 c 26720467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 213 - 414
Target Start/End: Complemental strand, 5523153 - 5522952
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    |||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| |||||||||||| |||||||  |||||||||| | |||||    
T  5523153 ttgtgagagttaacttaaaatcaagatctggaggaatcgtggcaagattgctgggcaacatggcacgattggtggtttcagttttgaggcaaggtactgg 5523054  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    |||||||||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5523053 aaaaatcgtggcacaatgggatcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtttcaaattttaag 5522954  T
Q  413 cg 414  Q
    ||    
T  5522953 cg 5522952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 215 - 412
Target Start/End: Original strand, 5191374 - 5191571
Alignment:
Q  215 gtgagagttaacttaaaatca-agatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    ||||||||||||||||||||| |  ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  5191374 gtgagagttaacttaaaatcagatttctgcag-aatcgtggcacgattgctgggcatcgtggcacgattggaggtttcagttttgaggcaaggtactgga 5191472  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||||||||||||||| || ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5191473 aaaatcgtggcacgatgggatctcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 5191571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 213 - 413
Target Start/End: Complemental strand, 10956564 - 10956365
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |  ||||| || | ||||||||||||||||||||  |||| ||||| |||||||    
T  10956564 ttgtgagagttaacttaaaatcaggatctgcaggaatcgtggcac-atggctggacatcatggcacgattggaggtttcagttttggggcaaggcactgg 10956466  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||| |||| |||||||  |||||||||||||||||||||||||    
T  10956465 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaataacataaacgtatttttaggtgcagatttgttccaaattttaag 10956366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 213 - 414
Target Start/End: Complemental strand, 18099708 - 18099507
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactg 311  Q
    ||||||||||||||||||||||| | | |||||  |||||||||||||  |||||||||||||||||||||||||||||||  ||||||||||  |||||    
T  18099708 ttgtgagagttaacttaaaatcaggtttctgcaa-aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagttttgaggcaagacactg 18099610  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| || |||||| |||||||| ||||||||||||||||||||||||    
T  18099609 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaacaatagaaacgtatttttgggtgcagatttgttccaaattttaa 18099510  T
Q  412 gcg 414  Q
    |||    
T  18099509 gcg 18099507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 213 - 414
Target Start/End: Complemental strand, 22114843 - 22114642
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcact 310  Q
    ||||||||||||||||||||||| | | ||| || |||||||||||||  | |||||||||||||||||| ||||||||||  ||| ||||||| |||||    
T  22114843 ttgtgagagttaacttaaaatcaggtttctgtag-aatcgtggcacgatggttgggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcact 22114746  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttta 410  Q
    |||||||| |||||||||||||||||||||||||||| |||||| | |||| ||||| ||||||||| |||||||| |||||||||||||||||||||||    
T  22114745 ggaaaaattgtggcacgatggggtcgcatcgtggcacgatggtgcgatggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaatttta 22114646  T
Q  411 agcg 414  Q
    ||||    
T  22114645 agcg 22114642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 214 - 414
Target Start/End: Complemental strand, 32264580 - 32264380
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactgg 312  Q
    |||||||||||||||||||||| | | ||||| |||||||||||||  |||||| ||||||||||||||||||||||||  ||| |||||||  ||||||    
T  32264580 tgtgagagttaacttaaaatcaggttttgcagaaatcgtggcacgatggctggg-aacgtggcacgattggaggtttcagtttttgaggcaagtcactgg 32264482  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    |    ||||||||||||||| | ||| |||||||| |||||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||    
T  32264481 atttttcgtggcacgatgggcttgcaacgtggcacgatggtgcgctggcagcgaataacagaaacatatttttgggtgcagatttgtttcaaattttaag 32264382  T
Q  413 cg 414  Q
    ||    
T  32264381 cg 32264380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 214 - 412
Target Start/End: Original strand, 24176999 - 24177197
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||||| |||| || ||||||||||||  ||| ||||||||||||||||||||  ||||||  | ||| ||||  |||||||    
T  24176999 tgtgagagttaacttaaaatcaagttctggagaaatcgtggcacgtttgcagggcaacgtggcacgattggttgtttcagttctgaagcaagtcactgga 24177098  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||  ||||||||||||| |||||  ||||||| |||||| | |||  |||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  24177099 aaaaatgtggcacgatgggatcgcaatgtggcacgatggtgcgttggaggcgaaaaacataaacgtatttttaagtgcagatttgttccaaattttaag 24177197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 11162891 - 11163008
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttca-agtttgaggcaaagcactgg 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||   |||||||||| |||||||    
T  11162891 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgattgctgggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactgg 11162989  T
Q  313 aaaaatcgtggcacgatgg 331  Q
    |||||| ||||||||||||    
T  11162990 aaaaattgtggcacgatgg 11163008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 307 - 413
Target Start/End: Complemental strand, 10958767 - 10958661
Alignment:
Q  307 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaat 406  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || ||||||||| |||||||  |||||||||||||||||||    
T  10958767 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagccaataacagaaacgtatttttaggtgcagatttgttccaaat 10958668  T
Q  407 tttaagc 413  Q
    |||||||    
T  10958667 tttaagc 10958661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 213 - 329
Target Start/End: Original strand, 11170144 - 11170260
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttc-aagtttgaggcaaagcactg 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||    |||||||||| ||||||    
T  11170144 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacggttgctgggcaacgtggcacga-tggaggtttcggtttttgaggcaaggcactg 11170242  T
Q  312 gaaaaatcgtggcacgat 329  Q
    ||||||||||||| ||||    
T  11170243 gaaaaatcgtggctcgat 11170260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 213 - 345
Target Start/End: Complemental strand, 18097423 - 18097291
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactg 311  Q
    ||||||||||||||||||||||| | | |||||  |||||||||||||  |||||||||||||||||||||||||||||||  |||||||||| |||  |    
T  18097423 ttgtgagagttaacttaaaatcaggtttctgcaa-aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagttttgaggcaaggcatag 18097325  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggc 345  Q
    |||||||||||||||||||||||||||| |||||    
T  18097324 gaaaaatcgtggcacgatggggtcgcatagtggc 18097291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 337 - 414
Target Start/End: Complemental strand, 10084807 - 10084730
Alignment:
Q  337 catcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10084807 catcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 10084730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 213 - 400
Target Start/End: Original strand, 38210066 - 38210252
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||| |||||||||||||| |||||||||||||||||||| |||||||| |  |||  || ||| |||||    
T  38210066 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcact 38210163  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||| ||||||||||| || ||| |||||| |  ||||| | |||| |||||||| | |||||||||||    
T  38210164 ggaaaaatcgtggcacgatggggtctcatcgtggcacgatagtgcgctggcggataaaaata-aaacgtatttttgggagcagatttgtt 38210252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 414
Target Start/End: Complemental strand, 10191727 - 10191650
Alignment:
Q  337 catcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10191727 catcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcaaatttgttccaaattttaagcg 10191650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 214 - 413
Target Start/End: Complemental strand, 53896754 - 53896556
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttca-agtttgaggcaaagcactg 311  Q
    |||||||||||||||||||||| | | |||||| ||||||||||||| |||||||||||||||||||| ||||||||| |   |||  ||||| | ||||    
T  53896754 tgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgattgctgggcaacgtggcacga-tggaggttttagttttttgggcaaggtactg 53896657  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    |||||||||||||||||||||||| ||||||||||| ||||||  || || |  ||||| | |||| |||||||| | ||||||||||| || |||||||    
T  53896656 gaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgctcttgcggataaaaata-aaacgtatttttgggagcagatttgttacagattttaa 53896558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 400
Target Start/End: Original strand, 50493676 - 50493861
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcactg 311  Q
    |||||||||||||||||||||| | | |||||| |||||||||||||  |||||||||||||||||||| |||||||| |  |||  || ||| ||||||    
T  50493676 tgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgatagctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactg 50493773  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    |||||||||||||||||||| ||| ||||||||||| |||||| |||||| |  ||||| | |||| |||||||| | |||||||||||    
T  50493774 gaaaaatcgtggcacgatggagtctcatcgtggcacgatggtgcgctggcggataaaaata-aaacgtatttttgggagcagatttgtt 50493861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 413
Target Start/End: Original strand, 25388683 - 25388795
Alignment:
Q  300 ggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgt 399  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||  ||||| | ||||||||||||| | ||||||||||    
T  25388683 ggcaaggcactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcagataaaaata-aaacatatttttgggagcagatttgt 25388781  T
Q  400 tccaaattttaagc 413  Q
    | || |||||||||    
T  25388782 tacagattttaagc 25388795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 247 - 413
Target Start/End: Original strand, 5899492 - 5899657
Alignment:
Q  247 aatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggc 345  Q
    |||| |||||||| ||  ||||||||||||||||| ||| |||| |  |||  |||||| |||||||||||||| |||||||||||||||||||||||||    
T  5899492 aatcatggcacgattgaagggcaacgtggcacgat-ggatgttttagttttttaggcaaggcactggaaaaatcatggcacgatggggtcgcatcgtggc 5899590  T
Q  346 acaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    || |||||| ||||||||  ||||| | |||| |||||||| || |||||||||| || |||||||||    
T  5899591 acgatggtgcgctggcagataaaaata-aaacgtatttttgggtacagatttgttacagattttaagc 5899657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 32218835 - 32218926
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaa 304  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||    |||||||||||||||||||||||||||||| ||||||||||    
T  32218835 ttgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatgattgggcaacgtggcacgattggaggtttcaactttgaggcaa 32218926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 316 - 414
Target Start/End: Original strand, 3859350 - 3859448
Alignment:
Q  316 aatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||| ||||| || | |||| |||||||| ||||||||||||| |||||||||||||    
T  3859350 aatcgtggcacgatggggtcacatcgtggcacgatggtgcgctggcggcgaataatataaacgtatttttgggtgcagatttgtttcaaattttaagcg 3859448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 213 - 413
Target Start/End: Complemental strand, 6064007 - 6063808
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatc-tgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    |||||||| |||||||||||||| | |  ||||| |||||||||||||  ||  ||||||||||||| || |||||||| |  |||  || ||| |||||    
T  6064007 ttgtgagaattaacttaaaatcaggtttatgcag-aatcgtggcacgatggcaaggcaacgtggcacaat-ggaggttttagttttttgggcaaggcact 6063910  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttta 410  Q
    | ||||||||||||||||||||||||||||||||||| ||||||  ||||| |  ||||| | ||||||||||||| ||||||||||||| || ||||||    
T  6063909 gaaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtggactggcggataaaaata-aaacatatttttgggtgcagatttgttacagatttta 6063811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 245 - 343
Target Start/End: Complemental strand, 10192498 - 10192401
Alignment:
Q  245 ggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtg 343  Q
    |||||||||||||||  ||  |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  10192498 ggaatcgtggcacgatcgcaaggcaacgtggcacgat-ggaggtttcagttttgaggcaaggcactggaaaaatcgtggcacgatgggatcgcatcgtg 10192401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 307 - 414
Target Start/End: Original strand, 45882752 - 45882859
Alignment:
Q  307 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaat 406  Q
    |||||||||||||||| ||||||||| | ||| |||||||| |||||| |||| || |||| ||||||||| |||||||| |||||||||||||  ||||    
T  45882752 cactggaaaaatcgtgccacgatgggattgcaacgtggcacgatggtgcgctgacaacgaataacagaaacctatttttgggtgcagatttgttgaaaat 45882851  T
Q  407 tttaagcg 414  Q
    ||||||||    
T  45882852 tttaagcg 45882859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 5886069 - 5886182
Alignment:
Q  299 aggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttg 398  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| || |||||| ||||||||  ||||| | |||| |||||||| ||||| |||||    
T  5886069 aggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggtacgatggtgcgctggcagataaaaata-aaacgtatttttgggtgcaaatttg 5886167  T
Q  399 ttccaaattttaagc 413  Q
    || || |||||||||    
T  5886168 ttacagattttaagc 5886182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 414
Target Start/End: Original strand, 18162508 - 18162584
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||| ||| |||||| |||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  18162508 atcgtgccacgatggtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcg 18162584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 245 - 343
Target Start/End: Complemental strand, 10085578 - 10085481
Alignment:
Q  245 ggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtg 343  Q
    |||||||||||| ||  ||  |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||| || |||||||    
T  10085578 ggaatcgtggcatgatcgcaaggcaacgtggcacgat-ggaggtttcagttttgaggcaaggcactggaaaaatcgtggcacgatgggatcacatcgtg 10085481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 48362186 - 48362096
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaa 304  Q
    |||||||||||||||||||||| | |||| || |||||||||||||  | |||||||||||||||||||||| ||||||  ||||||||||    
T  48362186 tgtgagagttaacttaaaatcaggttctgtagaaatcgtggcacgatggttgggcaacgtggcacgattggaagtttcagttttgaggcaa 48362096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 32218941 - 32219013
Alignment:
Q  340 cgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    |||||||| |||||| |||||||||||| || |||||| |||||||| |||||||||||||||||||||||||    
T  32218941 cgtggcacgatggtgcgctggcagcgaataagagaaacgtatttttgggtgcagatttgttccaaattttaag 32219013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 35777163 - 35777280
Alignment:
Q  214 tgtgagagttaacttaaaatca-agatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttca-agtttgaggcaaagcactg 311  Q
    |||||||||||||||||||| | |  ||||||| |||||||||||||| ||||||||||||||||||| ||||||||| |   |||  ||||| ||||||    
T  35777163 tgtgagagttaacttaaaattagatttctgcag-aatcgtggcacgacagctgggcaacgtggcacga-tggaggttttagttttttgggcaaggcactg 35777260  T
Q  312 gaaaaatcgtggcacgatgg 331  Q
    ||||||||||||||||||||    
T  35777261 gaaaaatcgtggcacgatgg 35777280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 413
Target Start/End: Original strand, 38889861 - 38889936
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||| |||||| |||||| ||||| |||||||||||||||||| ||||||||||||| || |||||||||    
T  38889861 atcgtggcacgatggtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgttacagattttaagc 38889936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 414
Target Start/End: Original strand, 11170262 - 11170324
Alignment:
Q  352 gtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  11170262 gtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcg 11170324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 338 - 413
Target Start/End: Complemental strand, 6719546 - 6719471
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||| |||||| |||||| ||||| |||||||||||||||||| ||||||||||| | || |||||||||    
T  6719546 atcgtggcacgatggtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgatacagattttaagc 6719471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 247 - 331
Target Start/End: Complemental strand, 6719618 - 6719532
Alignment:
Q  247 aatcgtggcacgactgctgggcaacgtggcacgattggag--gtttcaagtttgaggcaaagcactggaaaaatcgtggcacgatgg 331  Q
    ||||||||||||| ||  ||||| ||||||||||||||||  ||||||  ||| |||||| ||||||||||||||||||||||||||    
T  6719618 aatcgtggcacgattgaagggcatcgtggcacgattggagaggtttcagtttttaggcaatgcactggaaaaatcgtggcacgatgg 6719532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 338 - 413
Target Start/End: Original strand, 35777266 - 35777340
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||| |||||| ||||||||| ||||||| ||||||||||||| ||||||||||||| || |||||||||    
T  35777266 atcgtggcacgatggtgcgctggcagc-aaaaacataaacatatttttgggtgcagatttgttacagattttaagc 35777340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 339 - 414
Target Start/End: Complemental strand, 48362082 - 48362007
Alignment:
Q  339 tcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||||||||  |||||| |||||||||||| | ||||||| ||||||||  ||||||||||||||||||||||||||    
T  48362082 tcgtggcatgatggtgcgctggcagcgaatagcagaaacgtatttttggatgcagatttgttccaaattttaagcg 48362007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 414
Target Start/End: Original strand, 11163012 - 11163070
Alignment:
Q  356 gctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||| ||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  11163012 gctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcg 11163070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 412
Target Start/End: Original strand, 24979552 - 24979625
Alignment:
Q  339 tcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||||| |||||  ||||| |||||| |||| ||||||||||||  |||||||||||||||||||||||||    
T  24979552 tcgtggcacgatggtacgctggtagcgaataacataaacatattttttggtgcagatttgttccaaattttaag 24979625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 412
Target Start/End: Complemental strand, 46967023 - 46966974
Alignment:
Q  363 gcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  46967023 gcgaaaaacagaaacatatttttcaatgcagatttgttccaaattttaag 46966974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 292
Target Start/End: Complemental strand, 7606964 - 7606886
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttca 292  Q
    ||||||||||||||||||||||| | | |||||| ||||||| |||||  ||||||||||||||||||| |||||||||||    
T  7606964 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtgacacgatggctgggcaacgtggcacga-tggaggtttca 7606886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 414
Target Start/End: Complemental strand, 18097289 - 18097238
Alignment:
Q  363 gcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||||| ||||||||| |||||||| ||||||||||||| |||||||||||||    
T  18097289 gcgaataacagaaacgtatttttgggtgcagatttgtttcaaattttaagcg 18097238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 38889757 - 38889875
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat--ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcact 310  Q
    |||||||||||||||||||| | | |  |||||| |||||||| ||||  ||  |||||||||||||||| ||||||||||  |||  |||||| ||| |    
T  38889757 tgtgagagttaacttaaaattaggttttctgcag-aatcgtggtacgatggcaaggcaacgtggcacgat-ggaggtttcagttttttaggcaaggcatt 38889854  T
Q  311 ggaaaaatcgtggcacgatgg 331  Q
    |||||||||||||||||||||    
T  38889855 ggaaaaatcgtggcacgatgg 38889875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 414
Target Start/End: Complemental strand, 12268348 - 12268303
Alignment:
Q  369 aacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||| || ||||||| |||||| |||||||||||||||||||||    
T  12268348 aacagagacgtatttttcagtgcaaatttgttccaaattttaagcg 12268303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 13893267 - 13893311
Alignment:
Q  367 aaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||    
T  13893267 aaaacagaaacgtattttc-agtgcagatttgttccaaattttaag 13893311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 381 - 414
Target Start/End: Original strand, 15780747 - 15780780
Alignment:
Q  381 tttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||| |||||||||||||||||||||||||||    
T  15780747 tttttgggtgcagatttgttccaaattttaagcg 15780780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 18162405 - 18162450
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacga 259  Q
    |||||||||||||||||||||| ||||||||  ||||||| |||||    
T  18162405 tgtgagagttaacttaaaatcaggatctgcataaatcgtgccacga 18162450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 45882659 - 45882704
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacga 259  Q
    |||||||||||||||||||||| ||||||||  ||||||| |||||    
T  45882659 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacga 45882704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 2e-90; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 42064231 - 42064431
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  42064231 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgattgctgggcaacgtggtacgactggaggtttcaagtttgaggcaaagcactgga 42064330  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    ||||||||||||||||||| || ||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42064331 aaaatcgtggcacgatgggatcacatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatattttttagtgcagatttgttccaaattttaagc 42064430  T
Q  414 g 414  Q
    |    
T  42064431 g 42064431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 213 - 414
Target Start/End: Complemental strand, 21521235 - 21521034
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||  |||||||||||||||||||||||||||||||  ||||| ||||  ||||||    
T  21521235 ttgtgagagttaacttaaaatcaggttctacaggaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagttttgaagcaagccactgg 21521136  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    |||||||||| ||||||||| ||||| |||||||| |||||| |||||||||||| |||| |||| |||||||| |||||||||||||||||| ||||||    
T  21521135 aaaaatcgtgccacgatgggatcgcaacgtggcacgatggtgcgctggcagcgaataacataaacgtatttttgggtgcagatttgttccaaaatttaag 21521036  T
Q  413 cg 414  Q
    ||    
T  21521035 cg 21521034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 213 - 414
Target Start/End: Original strand, 27104514 - 27104715
Alignment:
Q  213 ttgtgagagttaacttaaaatca-agatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcact 310  Q
    |||| |||||||||||||||||| |  ||||||| ||||||||||||| ||  ||||||||||||||||| ||||||||||  ||| ||||||| |||||    
T  27104514 ttgtaagagttaacttaaaatcagatttctgcag-aatcgtggcacgattgaagggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcact 27104611  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttta 410  Q
    |||||||||||||||||||||| |||||||||||||| |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  27104612 ggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcagggaaaaacataaacatatttttgagtgcagatttgttccaaatttta 27104711  T
Q  411 agcg 414  Q
    ||||    
T  27104712 agcg 27104715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 217 - 414
Target Start/End: Complemental strand, 6259351 - 6259154
Alignment:
Q  217 gagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaa 316  Q
    ||||||||||||||||||| | ||||||| |||||||||||||  |||| |||||||||||| |||||| ||||||  ||||||| ||  ||||||||||    
T  6259351 gagagttaacttaaaatcaggttctgcagaaatcgtggcacgatggctgtgcaacgtggcactattggatgtttcagttttgaggaaagtcactggaaaa 6259252  T
Q  317 atcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||||||||| ||||| |||| ||| |||||| |||||| | ||| |||||||||||||||||| ||||||| |||||||||||||||||||    
T  6259251 atcgtggcacgatgggatcgcaacgtgacacgatggtgcgctggcggtgaataacagaaacatatttttgggtgcagacttgttccaaattttaagcg 6259154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 303 - 412
Target Start/End: Complemental strand, 13910494 - 13910385
Alignment:
Q  303 aaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttcc 402  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13910494 aaagcactggaaaaatcgtggcacgatggggtcgcattgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttcc 13910395  T
Q  403 aaattttaag 412  Q
    ||||||||||    
T  13910394 aaattttaag 13910385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 213 - 414
Target Start/End: Complemental strand, 24162753 - 24162551
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt--gaggcaaagcac 309  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||| |  | |||||||||||||||||| ||||||||||  |||  ||||||| ||||    
T  24162753 ttgtgagagttaacttaaaatcaagtttctgcag-aatcgtggcacaatggttgggcaacgtggcacgat-ggaggtttcagttttttgaggcaaggcac 24162656  T
Q  310 tggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttt 409  Q
    |||||||||||||||||||||||||||||||||||||| || ||| |||||| ||||| |  |||||| |||||||| ||||||||||||| ||||||||    
T  24162655 tggaaaaatcgtggcacgatggggtcgcatcgtggcacgattgtgcgctggctgcgaatattagaaacgtatttttgggtgcagatttgtttcaaatttt 24162556  T
Q  410 aagcg 414  Q
    |||||    
T  24162555 aagcg 24162551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 213 - 412
Target Start/End: Complemental strand, 19502551 - 19502352
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcact 310  Q
    |||||| |||||||||||||||| | | |||||| |||||||||||||  ||  |||||||||||||||| ||||||||||  |||  |||||| |||||    
T  19502551 ttgtgatagttaacttaaaatcaggtttctgcag-aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagttttttaggcaaggcact 19502454  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttta 410  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||  |||| ||||||||||||||||||  |||||||||| |||||||||||    
T  19502453 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcgacgaataacagaaacatatttttggttgcagatttgatccaaatttta 19502354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 214 - 413
Target Start/End: Complemental strand, 22407948 - 22407749
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||| ||||||| | | ||||||||||||||||||||| ||  ||| ||| ||||||||||||| ||||||  ||||||||||  || || |    
T  22407948 tgtgagagttaatttaaaattaggttctgcaggaatcgtggcacgattgaagggtaacatggcacgattggatgtttcagttttgaggcaagtcagtgaa 22407849  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    ||||| ||||||||||||| || || |||||||| |||||| | |||||||||| ||||||||| |||||||| |||||||||||||| |||||||||||    
T  22407848 aaaattgtggcacgatgggatcacaacgtggcacgatggtgcgttggcagcgaataacagaaacgtatttttgggtgcagatttgttcaaaattttaagc 22407749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 214 - 412
Target Start/End: Complemental strand, 19504884 - 19504686
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcactg 311  Q
    ||||| |||||||||||||||| | | | |||| |||| ||||||||  ||  |||||||||||||||| |||||||| || |||  |||||| ||||||    
T  19504884 tgtgaaagttaacttaaaatcaggtttcagcag-aatcatggcacgatggcaaggcaacgtggcacgat-ggaggttttaattttttaggcaaggcactg 19504787  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||  |||| |||||||||| ||||||  ||||||||||||||||||||||||    
T  19504786 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcgacgaataacagaaacacatttttaggtgcagatttgttccaaattttaa 19504687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 213 - 414
Target Start/End: Complemental strand, 40032587 - 40032397
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||  |||||||||||||||||||||||||||||||  |||||| |||  ||||||    
T  40032587 ttgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagttttgagacaagtcactgg 40032488  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    |    ||||||||||||||| |           || |||||| |||||||||||| ||||||||| |||||||| ||||||||||||||||| |||||||    
T  40032487 atttttcgtggcacgatgggat-----------acgatggtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaagttttaag 40032399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 213 - 400
Target Start/End: Complemental strand, 36559359 - 36559173
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||||||| |  |||  || ||| |||||    
T  36559359 ttgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacggctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcact 36559262  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  36559261 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 36559173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 331
Target Start/End: Complemental strand, 43624086 - 43623968
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactg 311  Q
    |||||| |||||||||||||||| | | |||||| |||| ||||||||  |||||||||| ||||||||||||||||||||  |||||||||| ||||||    
T  43624086 ttgtgaaagttaacttaaaatcaggtttctgcag-aatcatggcacgatggctgggcaacatggcacgattggaggtttcagttttgaggcaaggcactg 43623988  T
Q  312 gaaaaatcgtggcacgatgg 331  Q
     |||||||||||||||||||    
T  43623987 aaaaaatcgtggcacgatgg 43623968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 219 - 331
Target Start/End: Complemental strand, 6264658 - 6264546
Alignment:
Q  219 gagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaaat 318  Q
    ||||||||||||||||| | ||||||| ||| || ||||||  | |||||||||||||| ||||||| ||||||  ||||||||||  ||||||||||||    
T  6264658 gagttaacttaaaatcaggttctgcagaaattgttgcacgatggttgggcaacgtggcatgattggatgtttcagttttgaggcaagtcactggaaaaat 6264559  T
Q  319 cgtggcacgatgg 331  Q
    |||||||||||||    
T  6264558 cgtggcacgatgg 6264546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 213 - 331
Target Start/End: Complemental strand, 18800820 - 18800702
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||||||||||||| | |||| || ||||||||||||  || ||||||||||| |||||||||| ||||||  | ||| ||||  ||||||    
T  18800820 ttgtgagagttaacttaaaatcatgttctggagaaatcgtggcacgtttgttgggcaacgtgacacgattggatgtttcagttatgaagcaagtcactgg 18800721  T
Q  313 aaaaatcgtggcacgatgg 331  Q
    |||||| ||||||||||||    
T  18800720 aaaaattgtggcacgatgg 18800702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 214 - 400
Target Start/End: Complemental strand, 45332675 - 45332490
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcactg 311  Q
    |||||||||||||||||||||| | | |||||| |||||||||||||| |||||||  || |||||||| |||||||| |  |||  || ||| | ||||    
T  45332675 tgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggaactg 45332578  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    |||||||||||| ||||||||||| ||||||||||| |||||| |||||| |  ||||| | |||| |||||||| | |||||||||||    
T  45332577 gaaaaatcgtggaacgatggggtcacatcgtggcacgatggtgcgctggcggataaaaata-aaacgtatttttgggagcagatttgtt 45332490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 214 - 352
Target Start/End: Complemental strand, 36561677 - 36561539
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcactg 311  Q
    |||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  |  |||||||| |||||||| |  |||  || ||| ||||||    
T  36561677 tgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacggctgggcttcacggcacgat-ggaggttttagttttttgggcaaggcactg 36561580  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatgg 352  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  36561579 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatgg 36561539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 414
Target Start/End: Complemental strand, 6264560 - 6264484
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||| ||||||   | || ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  6264560 atcgtggcacgatggtgcattagcggcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcg 6264484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 317 - 400
Target Start/End: Complemental strand, 36561532 - 36561450
Alignment:
Q  317 atcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  36561532 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 36561450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 22287764 - 22287675
Alignment:
Q  325 acgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||| ||| | |||||||| |||||| |||||||||||| |||| |||  ||| |||| ||||| |||||||||||||||||||||    
T  22287764 acgatgggatcgtaacgtggcaccatggtgcgctggcagcgaataacaaaaatgtatgtttgggtgcatatttgttccaaattttaagcg 22287675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 367 - 411
Target Start/End: Complemental strand, 18800688 - 18800644
Alignment:
Q  367 aaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  18800688 aaaacagaaacatatttttaagtgcagatttgttccaaattttaa 18800644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 413
Target Start/End: Complemental strand, 43623982 - 43623908
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||| |||||| ||||||||| || |||| |||| |||||| | ||||||||||||||||||||||||||    
T  43623982 atcgtggcacgatggtgcgctggcagcaaataacataaacgtattttgg-gtgcagatttgttccaaattttaagc 43623908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 412
Target Start/End: Original strand, 35107110 - 35107214
Alignment:
Q  308 actggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatt 407  Q
    |||||||||| |||| ||||||||| ||| | |||| |||| ||||| ||||   ||||| |||| || | ||||||| | |||||||||||||||||||    
T  35107110 actggaaaaaacgtgtcacgatgggatcgtaacgtgtcacattggtgcgctgaaggcgaataacataatcgtatttttcaatgcagatttgttccaaatt 35107209  T
Q  408 ttaag 412  Q
    |||||    
T  35107210 ttaag 35107214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 36561553 - 36561518
Alignment:
Q  317 atcgtggcacgatggggtcgcatcgtggcacaatgg 352  Q
    ||||||||||||||||||||||||||||||| ||||    
T  36561553 atcgtggcacgatggggtcgcatcgtggcacgatgg 36561518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 28462671 - 28462627
Alignment:
Q  367 aaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    |||| |||||||||||||  ||||||||||||||||||||||||||    
T  28462671 aaaatagaaacatattttc-agtgcagatttgttccaaattttaag 28462627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 165; Significance: 4e-88; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 214 - 414
Target Start/End: Complemental strand, 31850138 - 31849938
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||| ||||| ||||||||    
T  31850138 tgtgagagttaacttaaaatcaagatctgcaggaattgtggcacgattgctgggcaacgtggcacgattggaggtttcagttttggggcaaggcactgga 31850039  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31850038 aaaatcttggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 31849939  T
Q  414 g 414  Q
    |    
T  31849938 g 31849938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 217 - 414
Target Start/End: Original strand, 5198217 - 5198414
Alignment:
Q  217 gagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaa 316  Q
    |||||||||||||||||||||||||||||||||| || || || |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  5198217 gagagttaacttaaaatcaagatctgcaggaatcatgacatgattgctgggcaacgtggcacgattggagatttcaagtttgaggcaaagctctggaaaa 5198316  T
Q  317 atcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||||||||| || ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5198317 atcgtggcacgatgggatcacatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 5198414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 213 - 414
Target Start/End: Original strand, 38408992 - 38409193
Alignment:
Q  213 ttgtgagagttaacttaaaatca-agatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactg 311  Q
    ||||||||||||||||||||| | |  ||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38408992 ttgtgagagttaacttaaaattagatttctgcag-aatcgtggcacgattgctgggcatcgtggcacgattggaggtttcaagtttgaggcaaagcactg 38409090  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    |||||||||||||||||||||||||||||||||||| |||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38409091 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgttggcggcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 38409190  T
Q  412 gcg 414  Q
    |||    
T  38409191 gcg 38409193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 218 - 413
Target Start/End: Original strand, 24888594 - 24888789
Alignment:
Q  218 agagttaacttaaaatca-agatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaa 316  Q
    |||||||||||||||||| |  ||||||| ||| |||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24888594 agagttaacttaaaatcagatttctgcag-aattgtggcacgatggctaggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaa 24888692  T
Q  317 atcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24888693 atcgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 24888789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 213 - 414
Target Start/End: Complemental strand, 22044931 - 22044729
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttca---agtttgaggcaaagcac 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| |||||||||||     |||||||||| ||||    
T  22044931 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgattgaagggcaacgtggcacga-tggaggtttcattttttttgaggcaaggcac 22044833  T
Q  310 tggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttt 409  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  22044832 tggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagggaaaaacagaaacatattttt-agtgcagatttgttccaaatttt 22044734  T
Q  410 aagcg 414  Q
    |||||    
T  22044733 aagcg 22044729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 213 - 414
Target Start/End: Complemental strand, 36920126 - 36919926
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||||||||||||| | ||||||  |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||  ||||||    
T  36920126 ttgtgagagttaacttaaaatcaggttctgcaa-aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaattttgaggcaagtcactgg 36920028  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |  |||||| |||||||| |||||||||||||||||||||||||    
T  36920027 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaatagtagaaacgtatttttgggtgcagatttgttccaaattttaag 36919928  T
Q  413 cg 414  Q
    ||    
T  36919927 cg 36919926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 9148054 - 9148245
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9148054 tgtgagagttaacttaaaatcaagatcttcaggaatcgtggtacgattgctgggcaacgtggcgcgattggaggtttcaagtttgaggcaaagcactgga 9148153  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    ||||||||||||||||||||| ||||||||||||        | ||||||| || ||||||||| || ||||| ||||||||||||||||||||||||||    
T  9148154 aaaatcgtggcacgatggggttgcatcgtggcac--------gatggcagcaaataacagaaacgta-ttttgggtgcagatttgttccaaattttaagc 9148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 213 - 413
Target Start/End: Complemental strand, 3825113 - 3824913
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactg 311  Q
    ||||||||||||||||||||||| | | |||||| ||||||| |||||  |||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  3825113 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtgacacgatggctgggcaacatggcacgattggaggtttcagttttgaggcaaagcactg 3825015  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    |||||||| |||||| |||||||||||||||||||| |||||| | ||||  |||| ||||||||| |||||||| ||||||||||||||||||||||||    
T  3825014 gaaaaatcatggcacaatggggtcgcatcgtggcacgatggtgcgttggcgacgaataacagaaacgtatttttgggtgcagatttgttccaaattttaa 3824915  T
Q  412 gc 413  Q
    ||    
T  3824914 gc 3824913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 214 - 414
Target Start/End: Complemental strand, 5638006 - 5637808
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    |||||||||||||||||||||| | | |||| ||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||||||| |||||||    
T  5638006 tgtgagagttaacttaaaatcaggtttctgc-ggaatcgtggcacgattgctgggcaacgtggcacgat-ggaggtttcagttttgaggcaaggcactgg 5637909  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||| || ||||||||| |||||||||||||  |||||| |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||    
T  5637908 aaaaatcatgtcacgatgggatcgcatcgtggcatgatggtgagctggcagcgaaaaacagaaacgta-ttttgggtgcagatttgttccaaattttaag 5637810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 213 - 414
Target Start/End: Original strand, 48486112 - 48486313
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||||||||||||| |  |||||| |||||||||||||  |||| ||||||||||||||||||||||||||  ||||||||||  ||||||    
T  48486112 ttgtgagagttaacttaaaatcaggtcctgcagaaatcgtggcacgatggctgagcaacgtggcacgattggaggtttcagttttgaggcaagtcactgg 48486211  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    |    |||||||||||||||||| ||  |||||||||||||| |||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  48486212 atttttcgtggcacgatggggtcacaatgtggcacaatggtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaag 48486311  T
Q  413 cg 414  Q
    ||    
T  48486312 cg 48486313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 213 - 413
Target Start/End: Complemental strand, 11006782 - 11006581
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatct--gcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcac 309  Q
    ||||||||||||||||||||||| | | |  |||| |||||||||||||  |||||||||||||||||||| ||||||||||| |||  |||||| ||||    
T  11006782 ttgtgagagttaacttaaaatcaggttttatgcag-aatcgtggcacgatcgctgggcaacgtggcacgat-ggaggtttcaattttttaggcaaggcac 11006685  T
Q  310 tggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttt 409  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| ||||||||||||| || |||||    
T  11006684 tggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaaaaacagaaacatatttttgggtgcagatttgttacagatttt 11006585  T
Q  410 aagc 413  Q
    ||||    
T  11006584 aagc 11006581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 214 - 414
Target Start/End: Complemental strand, 36922033 - 36921834
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||| | ||||||  |||||||| ||||  |||||||||| ||||||||||||||||||||  ||||||||||  |||||||    
T  36922033 tgtgagagttaacttaaaatcaggttctgcaa-aatcgtggtacgatggctgggcaacatggcacgattggaggtttcagttttgaggcaagtcactgga 36921935  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||||||||||||||||||| ||||||| ||||||   |||||||||| ||||||||| ||||||||  |||||||||||||||||||||||||    
T  36921934 aaaatcgtggcacgatggggtcgcattgtggcacgatggtgcattggcagcgaataacagaaacgtatttttggatgcagatttgttccaaattttaagc 36921835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 246 - 414
Target Start/End: Complemental strand, 22803240 - 22803073
Alignment:
Q  246 gaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggc 345  Q
    ||||||||| ||||  |||||||||||||||||||||||||||||||  ||||||| || ||||||||||||||||||| ||||||||||||||||||||    
T  22803240 gaatcgtggtacgatggctgggcaacgtggcacgattggaggtttcagttttgaggaaaggcactggaaaaatcgtggctcgatggggtcgcatcgtggc 22803141  T
Q  346 acaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    || |||||| |||||||||||| |||| |||| || |||||||||||||||||||||||||||||||||    
T  22803140 acgatggtgcgctggcagcgaataacaaaaacgta-ttttgagtgcagatttgttccaaattttaagcg 22803073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 212 - 413
Target Start/End: Original strand, 18846921 - 18847124
Alignment:
Q  212 gttgtgagagttaacttaaaatcaagat----ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagc 307  Q
    |||||||||||||||||||||||| |||    |||||| ||||||||||||| || |||| | ||||||||||||||||||||||  |||||||||| |     
T  18846921 gttgtgagagttaacttaaaatca-gatttttctgcag-aatcgtggcacgattgttgggaatcgtggcacgattggaggtttcagttttgaggcaaggt 18847018  T
Q  308 actggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatt 407  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||| ||| || | |||||||||||||||||||||| ||||||||||||| ||||||    
T  18847019 actggaaaaatcgtggtacgatggggtcgcatcgtggcacgatggtgcgctcgcggggaaaaacagaaacatatttttgggtgcagatttgttacaaatt 18847118  T
Q  408 ttaagc 413  Q
    | ||||    
T  18847119 taaagc 18847124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 216 - 414
Target Start/End: Original strand, 51015042 - 51015240
Alignment:
Q  216 tgagagttaacttaaaatca-agatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcactgga 313  Q
    |||||||||||||||||||| |  ||||||| |||||||||| ||  ||  |||||||||||||||| ||||||||||  |||  |||||| ||||||||    
T  51015042 tgagagttaacttaaaatcagatttctgcag-aatcgtggcatgatggcaaggcaacgtggcacgat-ggaggtttcagttttttaggcaaggcactgga 51015139  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    ||||| |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  51015140 aaaattgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaataacagaaacatatttttcagtgcagatttgttccaaattttaagc 51015239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 213 - 413
Target Start/End: Complemental strand, 9174685 - 9174486
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtt-tgaggcaaagcactg 311  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||| ||| |||||||| ||||||| |||||||| |  || | |||||| ||||||    
T  9174685 ttgtgagagttaacttaaaatcaggttctgcag-aatcgtggcacgacggctaggcaacgtagcacgat-ggaggttttagtttattaggcaaggcactg 9174588  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    |||||||| ||||||||||||||| ||||||||||| |||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||  ||||||    
T  9174587 gaaaaatcatggcacgatggggtctcatcgtggcacgatggtgcgctggcagggaaaaacagaaacatatttttgggtgcagatttgttacagtttttaa 9174488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 214 - 413
Target Start/End: Complemental strand, 9177035 - 9176836
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcactg 311  Q
    |||||||||||||||||||||| | | |||||| |||||||||||||| | | |||||||||||||||| |||||||| |  |||  |||||| ||||||    
T  9177035 tgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacggttaggcaacgtggcacgat-ggaggttttagttttttaggcaaggcactg 9176938  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||||| |||||||||||||||||||||| |||||||||||||  |||||| ||    
T  9176937 gaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcagggaaaaacagaaacatatttttgggtgcagatttgttataaatttaaa 9176838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 11009046 - 11008932
Alignment:
Q  299 aggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttg 398  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||| ||||||||||||||||||||| |||||||||||    
T  11009046 aggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcactggcagcaaaaaacagaaacatatttttgggtgcagatttg 11008947  T
Q  399 ttccaaattttaagc 413  Q
    || || |||||||||    
T  11008946 ttacagattttaagc 11008932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 214 - 411
Target Start/End: Complemental strand, 619986 - 619789
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||| | | || |||||| || |||||| ||  || ||||||||||| |||||| ||||||  ||||||||||  || ||||    
T  619986 tgtgagagttaacttaaaatcaggttatgtaggaattgtcgcacgattgaaggtcaacgtggcacaattggatgtttcagttttgaggcaagtcattgga 619887  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
        ||||||||||||||||||||| ||||||||||||||| |||||| ||||| |||||||||||||||||| ||  |||||| |||||||||||||    
T  619886 tttttcgtggcacgatggggtcgcaacgtggcacaatggtgcgctggcggcgaataacagaaacatatttttgggtagagattttttccaaattttaa 619789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 301 - 414
Target Start/End: Complemental strand, 22047135 - 22047024
Alignment:
Q  301 gcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    |||| |||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  22047135 gcaaggcactggaaaaatc-tggcacgatgggatcgcatcgtggcacgatggtgtgctggcagggaaaaacagaaacatattttt-agtgcagatttgtt 22047038  T
Q  401 ccaaattttaagcg 414  Q
    ||||||||||||||    
T  22047037 ccaaattttaagcg 22047024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 218 - 413
Target Start/End: Complemental strand, 37089910 - 37089714
Alignment:
Q  218 agagttaacttaaaatca-agatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcactggaaa 315  Q
    |||||||||||||||||| |  ||||||| |||||||||||||  ||  ||||||||||||||||  || |||| |  |||  |||  | ||||||||||    
T  37089910 agagttaacttaaaatcagatttctgcag-aatcgtggcacgatggcaaggcaacgtggcacgatgagatgttttagttttttaggtgaggcactggaaa 37089812  T
Q  316 aatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||||| |||||||  ||||||||||||||||||||||||||    
T  37089811 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacgtatttttaggtgcagatttgttccaaattttaagc 37089714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 216 - 414
Target Start/End: Complemental strand, 40091952 - 40091754
Alignment:
Q  216 tgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaa 315  Q
    |||||||||||||||||||| | ||||||  ||||||||||||   | |||| |||||||||||||||||| |||||  ||||| | ||  || ||||||    
T  40091952 tgagagttaacttaaaatcaggttctgcaataatcgtggcacggtggttgggtaacgtggcacgattggagatttcagttttgaagtaagccattggaaa 40091853  T
Q  316 aatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||||||| || |||||||||||| |||| ||| ||||||  ||| ||||||| |||  |||| ||||||| |||||| |||||||||||||||||||||    
T  40091852 aatcgtgccatgatggggtcgcaacgtgacacgatggtgcactgacagcgaataacgtaaacgtatttttcagtgcatatttgttccaaattttaagcg 40091754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 213 - 400
Target Start/End: Complemental strand, 16932361 - 16932175
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||| |||||||||||||| |||||||||||||||||||| |||||||| |  |||  || ||| |||||    
T  16932361 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcact 16932264  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| |||||| |  ||||| | |||| |||||||| | |||||||||||    
T  16932263 ggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaata-aaacgtatttttgggagcagatttgtt 16932175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 414
Target Start/End: Original strand, 24880299 - 24880445
Alignment:
Q  268 caacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaa 367  Q
    ||||||||||||| |||||||||||  ||||||||||  |||||||    ||| ||||||||||| | ||| |||||||| |||||| ||||||||||||    
T  24880299 caacgtggcacgaatggaggtttcagttttgaggcaagtcactggatttttcgcggcacgatgggattgcaacgtggcacgatggtgcgctggcagcgaa 24880398  T
Q  368 aaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
     ||||||||| ||||||||  ||||||||||||||||||||||||||    
T  24880399 taacagaaacgtatttttggatgcagatttgttccaaattttaagcg 24880445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 338 - 414
Target Start/End: Original strand, 11434873 - 11434949
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11434873 atcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 11434949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 267 - 414
Target Start/End: Original strand, 24878836 - 24878983
Alignment:
Q  267 gcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcga 366  Q
    ||||||||||||||||||||||||||  ||||| ||||  |||||||    ||||||||||||||| | ||| |||||||| |||||  ||||||| |||    
T  24878836 gcaacgtggcacgattggaggtttcagttttgacgcaagtcactggatttttcgtggcacgatgggattgcaacgtggcacgatggtacgctggcatcga 24878935  T
Q  367 aaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    | ||||||||| |||||||| ||||| |||||||||||||||||||||    
T  24878936 ataacagaaacgtatttttgggtgcatatttgttccaaattttaagcg 24878983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 214 - 400
Target Start/End: Complemental strand, 16934714 - 16934529
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcactg 311  Q
    |||||||||||||||||||||| | | |||||| |||||||||||||| |||||||||| ||||||||| |||||||| |  |||  || ||| ||||||    
T  16934714 tgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacatggcacgat-ggaggttttagttttttgggcaaggcactg 16934617  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    |||||||||||||||||||||||| |||| |||||| |||||| |||| | |  ||||| | |||| |||||||| | |||||||||||    
T  16934616 gaaaaatcgtggcacgatggggtctcatcctggcacgatggtgcgctgtcggataaaaata-aaacgtatttttgggagcagatttgtt 16934529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 214 - 400
Target Start/End: Complemental strand, 22783317 - 22783132
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcactg 311  Q
    |||||||||||||||||||||| | | |||||| |||||||| ||||  |||||||||||||||||||| |||||||| |  |||  || ||| ||||||    
T  22783317 tgtgagagttaacttaaaatcaggtttctgcag-aatcgtggtacgatagctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactg 22783220  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    |||||||| ||||||||||||||| ||||||||||| |||||| |||||| |  ||||| | |||| |||||||| | |||||||||||    
T  22783219 gaaaaatcatggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaata-aaacgtatttttgggagcagatttgtt 22783132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 213 - 400
Target Start/End: Complemental strand, 22780953 - 22780767
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||| |||||||| ||||  |||||||||||||||||||| |||||||| |  |||  || ||| |||||    
T  22780953 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggtacgatagctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcact 22780856  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||| ||||||||||||||| ||| ||||||| |||||| |||||| |  ||||| | |||| |||||||| | |||||||||||    
T  22780855 ggaaaaatcatggcacgatggggtctcattgtggcacgatggtgcgctggcggataaaaata-aaacgtatttttgggagcagatttgtt 22780767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 319 - 412
Target Start/End: Complemental strand, 52942881 - 52942788
Alignment:
Q  319 cgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||||||||||||| || |||||||| ||| || |||||||||||| |||| ||||||||||||  |||||||||||||||||||||||||    
T  52942881 cgtggcacgatggggtcacaacgtggcacgatgatgcgctggcagcgaataacataaacatattttttggtgcagatttgttccaaattttaag 52942788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 352
Target Start/End: Complemental strand, 52943002 - 52942869
Alignment:
Q  219 gagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaaat 318  Q
    ||||||||||||||||| | | ||||  |||||||||||||  | |||||||||||||||||||||||||||||  ||||||||||  ||||| | |  |    
T  52943002 gagttaacttaaaatcaggttttgcaaaaatcgtggcacgatggttgggcaacgtggcacgattggaggtttcagctttgaggcaagtcactgaatattt 52942903  T
Q  319 cgtggcacgatggggtcgcatcgtggcacaatgg 352  Q
    ||||||||||||||||| || |||||||| ||||    
T  52942902 cgtggcacgatggggtcacaacgtggcacgatgg 52942869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 7941133 - 7941251
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt--gaggcaaagcact 310  Q
    |||||||||||||||||||||| | | |||||| |||||||||||||  |||||||||||||||||||| ||||||||||  |||  ||||||| |||||    
T  7941133 tgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgatggctgggcaacgtggcacgat-ggaggtttcagttttttgaggcaaggcact 7941230  T
Q  311 ggaaaaatcgtggcacgatgg 331  Q
    |||||||| ||||||||||||    
T  7941231 ggaaaaatggtggcacgatgg 7941251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 246 - 331
Target Start/End: Complemental strand, 22801347 - 22801262
Alignment:
Q  246 gaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaaatcgtggcacgatgg 331  Q
    ||||||||||||||  | ||||||||||| |||||||||||||||||  |||||||||| | ||||||||||||||||||||||||    
T  22801347 gaatcgtggcacgatggttgggcaacgtgacacgattggaggtttcagttttgaggcaaggaactggaaaaatcgtggcacgatgg 22801262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 292
Target Start/End: Complemental strand, 22048576 - 22048498
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttca 292  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| ||  |||||||||||||||| |||||||||||    
T  22048576 ttgtgagagttaacttaaaatcaagatccgcaagaatcgtggcacgattgaagggcaacgtggcacga-tggaggtttca 22048498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 11434769 - 11434887
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt--gaggcaaagcact 310  Q
    |||||||||||||||||||||| | | |||||| |||||||| ||||  |||||||||||||||||||| ||||||||||  |||  |||||||  ||||    
T  11434769 tgtgagagttaacttaaaatcaggtttctgcag-aatcgtggtacgatggctgggcaacgtggcacgat-ggaggtttcagttttttgaggcaagacact 11434866  T
Q  311 ggaaaaatcgtggcacgatgg 331  Q
    |||||||||||||||||||||    
T  11434867 ggaaaaatcgtggcacgatgg 11434887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 414
Target Start/End: Original strand, 7941240 - 7941313
Alignment:
Q  341 gtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||||||| |||||| |||||   |||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  7941240 gtggcacgatggtgcgctggtgacgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcg 7941313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 413
Target Start/End: Original strand, 47274647 - 47274720
Alignment:
Q  340 cgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||| |||||| | |||||||||| |||| |||| |||||||| ||||||||||||| ||||||||||||    
T  47274647 cgtggcacgatggtgcgatggcagcgaataacataaacgtatttttgggtgcagatttgtttcaaattttaagc 47274720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 338 - 414
Target Start/End: Complemental strand, 22801276 - 22801201
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||| |||||| || |||||| || ||||||||| |||||| ||||||||||||||| |||||||||||||    
T  22801276 atcgtggcacgatggtgcgccggcagcaaataacagaaacgtatttt-gagtgcagatttgtttcaaattttaagcg 22801201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 53773990 - 53774044
Alignment:
Q  152 cttatgcgactgaagtatgtgagtaagtcatggaagtccctcatctccgaaccca 206  Q
    ||||||| |||||||| |||||||||| |||||||  ||||||||||||| ||||    
T  53773990 cttatgctactgaagtttgtgagtaagccatggaacaccctcatctccgatccca 53774044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 407
Target Start/End: Complemental strand, 8756653 - 8756596
Alignment:
Q  350 tggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatt 407  Q
    ||||| |||||  ||||| ||||||||||||||| |  ||||||||||||||||||||    
T  8756653 tggtgcgctggaggcgaataacagaaacatatttctcggtgcagatttgttccaaatt 8756596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 6e-84; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 213 - 414
Target Start/End: Original strand, 35378 - 35579
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35378 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgattgctaggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 35477  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||||||||||||||||||||||||||||| | || ||| ||||||||| || | ||||||| |||||||| |||||||||||||||||||||||||    
T  35478 aaaaatcgtggcacgatggggtcgcatcgtggcccgatcgtgcgctggcagcaaatagcagaaacgtatttttgggtgcagatttgttccaaattttaag 35577  T
Q  413 cg 414  Q
    ||    
T  35578 cg 35579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 213 - 414
Target Start/End: Original strand, 44313 - 44514
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  44313 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgatttctgggcaatgtggcacgattggaggtttcaagtttgacgcaaagcactgg 44412  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||| ||||||||||||||||||||||||||| |||||| ||||||||| || |||| ||||||||||||| |||||||||||| ||||||||||||    
T  44413 aaaaatcatggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaataacataaacatatttttgggtgcagatttgtaccaaattttaag 44512  T
Q  413 cg 414  Q
    ||    
T  44513 cg 44514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 25542281 - 25542481
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  ||| |||||| ||||| ||    
T  25542281 tgtgagagttaacttaaaatcaagatctgcaggaat-gtggcacgattgctgggcaacgtggcacgattggaggtttcagttttaaggcaaggcacttga 25542379  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacata-tttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  25542380 aaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatattttttgagtgtagatttattccaaattttaag 25542479  T
Q  413 cg 414  Q
    ||    
T  25542480 cg 25542481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 3878322 - 3878521
Alignment:
Q  214 tgtgagagttaacttaaaatca-agatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    |||||||||||||||||||||| |  ||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3878322 tgtgagagttaacttaaaatcagatttctgcag-aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 3878420  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||||||||||||||||||||||||||||||| |||||  |||||||||||| ||||||||| || ||||| |||||||||||||||||||||||||    
T  3878421 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtacgctggcagcgaataacagaaacgta-ttttgggtgcagatttgttccaaattttaag 3878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 6865710 - 6865584
Alignment:
Q  87 catcatcagtattcctccctgacgaactcatcgttgaagtgctatcatggcttaccgtaaaacaacttatgcgactgaagtatgtgagtaagtcatggaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6865710 catcatcagtattcctccctgacgaactcatcgttgaagtgctatcatggcttaccgtaaaacaacttatgcgactgaagtatgtgagtaagtcatggaa 6865611  T
Q  187 gtccctcatctccgaacccacctttgt 213  Q
    |||||||||||||||||||||||||||    
T  6865610 gtccctcatctccgaacccacctttgt 6865584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 214 - 414
Target Start/End: Complemental strand, 27306767 - 27306568
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||| | | | ||||  |||||||||||||  ||||| |||||||||||||||||||||||||  ||||||||||  || ||||    
T  27306767 tgtgagagttaacttaaaataaggttttgcaa-aatcgtggcacgatggctggacaacgtggcacgattggaggtttcagttttgaggcaagtcattgga 27306669  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||||||||||||||||| ||||||||| |||||| ||| |||||||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  27306668 aaaatcgtggcacgatggggtcgcttcgtggcacgatggtgcgctagcagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagc 27306569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 1049813 - 1049699
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||| |||| | ||||||    
T  1049813 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgattgctgggcaacgtggcacgattggaggtttcagttttgaagcaaggtactgga 1049714  T
Q  314 aaaatcgtggcacga 328  Q
    |||||||||||||||    
T  1049713 aaaatcgtggcacga 1049699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 18567363 - 18567563
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||| ||||||||||| | ||| ||| |||||||||||||  ||||||||| |||||||||||||||||||||  ||||||||||  |||||||    
T  18567363 tgtgagagttgacttaaaatcaggttctacagaaatcgtggcacgatagctgggcaaagtggcacgattggaggtttcagttttgaggcaagtcactgga 18567462  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacata-tttttgagtgcagatttgttccaaattttaag 412  Q
        |||||||||||||||||| || | |||||| |||||| ||||||| |||| ||||||||| || |||||  ||||| | |||||||||||||||||    
T  18567463 tttttcgtggcacgatggggtcacaacttggcacgatggtgcgctggcaacgaataacagaaacgtatttttttggtgca-aattgttccaaattttaag 18567561  T
Q  413 cg 414  Q
    ||    
T  18567562 cg 18567563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 214 - 414
Target Start/End: Complemental strand, 31435586 - 31435386
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||| ||||||||||| | ||| ||| |||||||||||||  ||||||||| |||||||||||||||||||||  ||||||||||  |||||||    
T  31435586 tgtgagagttgacttaaaatcaggttctacagaaatcgtggcacgatagctgggcaaagtggcacgattggaggtttcagttttgaggcaagtcactgga 31435487  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacata-tttttgagtgcagatttgttccaaattttaag 412  Q
        |||||||||||||||||| || | |||||| |||||| ||||||| |||| ||||||||| || |||||  ||||| | |||||||||||||||||    
T  31435486 tttttcgtggcacgatggggtcacaacttggcacgatggtgcgctggcaacgaataacagaaacgtatttttttggtgca-aattgttccaaattttaag 31435388  T
Q  413 cg 414  Q
    ||    
T  31435387 cg 31435386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 213 - 400
Target Start/End: Complemental strand, 1047504 - 1047318
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||| |||||||||||||| |||||||||||||||||||| |||||||| |  |||  || ||| |||||    
T  1047504 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcact 1047407  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| |||||| |  ||||| | |||| |||||||| | |||||||||||    
T  1047406 ggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaata-aaacgtatttttgggagcagatttgtt 1047318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 214 - 400
Target Start/End: Original strand, 2935070 - 2935255
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcactg 311  Q
    |||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||||||| |  |||  || ||| ||||||    
T  2935070 tgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacggctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactg 2935167  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||||| |||||||||||    
T  2935168 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgagagcagatttgtt 2935255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 213 - 400
Target Start/End: Original strand, 22136877 - 22137063
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||||||| |  |||  || ||| |||||    
T  22136877 ttgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacagctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcact 22136974  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  22136975 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 22137063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 213 - 400
Target Start/End: Original strand, 40551904 - 40552090
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||||||| |  |||  || ||| |||||    
T  40551904 ttgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacagctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcact 40552001  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  40552002 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 40552090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 400
Target Start/End: Complemental strand, 9027687 - 9027502
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcactg 311  Q
    |||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||||||| |  |||  || ||| ||||||    
T  9027687 tgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacggctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactg 9027590  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  9027589 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 9027502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 213 - 331
Target Start/End: Original strand, 26804344 - 26804462
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactg 311  Q
    ||||||||||||||||||||||| | | || ||| |||||||||||||  |||||||||||||| ||||||||||||||||  |||||||||| ||| ||    
T  26804344 ttgtgagagttaacttaaaatcaggtttctacag-aatcgtggcacgatggctgggcaacgtggtacgattggaggtttcagttttgaggcaaggcagtg 26804442  T
Q  312 gaaaaatcgtggcacgatgg 331  Q
    ||||||||||||||||||||    
T  26804443 gaaaaatcgtggcacgatgg 26804462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 400
Target Start/End: Original strand, 22107866 - 22108052
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| | |||||| |  |||  || ||| |||||    
T  22107866 ttgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacagctgggcttcgcggcacgat-gcaggttttagttttttgggcaaggcact 22107963  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  22107964 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 22108052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 400
Target Start/End: Original strand, 40549626 - 40549812
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| | |||||| |  |||  || ||| |||||    
T  40549626 ttgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacagctgggcttcgcggcacgat-gcaggttttagttttttgggcaaggcact 40549723  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  40549724 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 40549812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 40837158 - 40837083
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatat-ttttgagtgcagatttgttccaaattttaag 412  Q
    |||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  40837158 atcgtggcacgatggtgtgctggcagcgaaaaatagaaacatattttttgagtgcagatttgttccaaattttaag 40837083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 338 - 414
Target Start/End: Complemental strand, 1049710 - 1049634
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||| | |||| |||||| ||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  1049710 atcgtggcacgaaggtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcg 1049634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 310 - 414
Target Start/End: Original strand, 22392319 - 22392423
Alignment:
Q  310 tggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttt 409  Q
    |||| |||||||| ||||||||| ||||| ||||| || |||||| |||||  || |||||||||||  ||||||| ||||||||||||||||||||| |    
T  22392319 tggagaaatcgtgccacgatgggatcgcaacgtggtacgatggtgcgctggaggcaaaaaacagaaatgtatttttcagtgcagatttgttccaaattgt 22392418  T
Q  410 aagcg 414  Q
    |||||    
T  22392419 aagcg 22392423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 331
Target Start/End: Complemental strand, 40837261 - 40837144
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcactg 311  Q
    |||||||||||||||||||||| | | |||||| |||||||||||||  |  || |||||||||||||| ||||||||||  |||  |||||| ||||||    
T  40837261 tgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgatggtcggacaacgtggcacgat-ggaggtttcagttttttaggcaaggcactg 40837164  T
Q  312 gaaaaatcgtggcacgatgg 331  Q
    ||||||||||||||||||||    
T  40837163 gaaaaatcgtggcacgatgg 40837144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 364 - 412
Target Start/End: Original strand, 45366446 - 45366494
Alignment:
Q  364 cgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  45366446 cgaaaaacagaaacgtatttttcagtgcagatttgttccaaattttaag 45366494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 661508 - 661389
Alignment:
Q  95 gtattcctccc-tgacgaactcatcgttgaagtgctatcatggcttaccgtaaaacaacttatgcgactgaagtatgtgagtaagtcatggaagtccctc 193  Q
    ||||||||||| ||||||||| |||| ||||||||| || |  |||   ||||||| ||| |||| ||||||||   ||||||||||||||||  | |||    
T  661508 gtattcctcccctgacgaacttatcgctgaagtgctttccttccttcaagtaaaaccactgatgctactgaagtgcatgagtaagtcatggaatactctc 661409  T
Q  194 atctccgaacccacctttgt 213  Q
    ||||| ||||||||||||||    
T  661408 atctcggaacccacctttgt 661389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 414
Target Start/End: Original strand, 26804466 - 26804523
Alignment:
Q  356 gctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||||||||| || ||||||||| |||||| | |||||||||||||||||||||||||||    
T  26804466 gctggcagcaaataacagaaacgtattttgg-gtgcagatttgttccaaattttaagcg 26804523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 22087824 - 22087874
Alignment:
Q  155 atgcgactgaagtatgtgagtaagtcatggaagtccctcatctccgaaccc 205  Q
    ||||| ||||||| | |||||||||||||||||| |||||| |||||||||    
T  22087824 atgcggctgaagtgtttgagtaagtcatggaagtacctcatgtccgaaccc 22087874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 2e-83; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 15823286 - 15823486
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15823286 tgtgagagttaacttaaaatcaggatctgcaggaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactaga 15823385  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||||||||||||||||||||||||||| |||||| ||| ||||| || ||||||||||||||||||  |||||||||||||||||||||||||    
T  15823386 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctagcagcaaataacagaaacatatttttggatgcagatttgttccaaattttaagc 15823485  T
Q  414 g 414  Q
    |    
T  15823486 g 15823486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 28840418 - 28840618
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||  ||| |||||| | ||||||    
T  28840418 tgtgaaagttaacttaaaatcaggatctgcaggaatcgtggcacgatggcaaggcaacgtggcacgattggaggtttcagtttttaggcaaggtactgga 28840517  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    ||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28840518 aaaattgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 28840617  T
Q  414 g 414  Q
    |    
T  28840618 g 28840618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 212 - 414
Target Start/End: Complemental strand, 10400371 - 10400169
Alignment:
Q  212 gttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcact 310  Q
    |||||||||||||||||||||||| | | |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10400371 gttgtgagagttaacttaaaatcaggtttctgc-ggaatcgtggcacgattgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcact 10400273  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttta 410  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| || |||| |||| |||||||| |||||||||||||||||||||||    
T  10400272 ggaaatatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaataacataaacgtatttttgggtgcagatttgttccaaatttta 10400173  T
Q  411 agcg 414  Q
    ||||    
T  10400172 agcg 10400169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 213 - 414
Target Start/End: Original strand, 28842232 - 28842433
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||||  ||  ||| |||||||||||||||||||||||  ||| |||||| | |||||    
T  28842232 ttgtgaaagttaacttaaaatcaggatctgtaggaatcgtggcacgatggcaaggctacgtggcacgattggaggtttcagtttttaggcaaggtactgg 28842331  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    |||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28842332 aaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgtcctggcagcgaaaaacagaaacatatttttgagtgcaaatttgttccaaattttaag 28842431  T
Q  413 cg 414  Q
    ||    
T  28842432 cg 28842433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 213 - 414
Target Start/End: Original strand, 13761576 - 13761777
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcact 310  Q
    ||||||||||||||||||||||| | | |||||| |||||||||||||  |||||||||||||||| ||| ||||||||||  ||| ||||||| |||||    
T  13761576 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgatggctgggcaacgtggcatgat-ggaggtttcagtttttgaggcaaggcact 13761673  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttta 410  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||| |||||||| |||||||||||||||||||||||    
T  13761674 ggaaaaatcgtggcacgatggggtcgcatcgcggcacgatggtgtgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaatttta 13761773  T
Q  411 agcg 414  Q
    ||||    
T  13761774 agcg 13761777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 51749778 - 51749979
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt--gaggcaaagcact 310  Q
    |||||||||||||||||||||||| | |||||| |||||||||||||  | |||||||||||| ||||| ||||||||||  |||  ||||||| |||||    
T  51749778 tgtgagagttaacttaaaatcaagtttctgcag-aatcgtggcacgatggttgggcaacgtggtacgat-ggaggtttcagttttttgaggcaaggcact 51749875  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttta 410  Q
    ||||||||||||||||||||||||||||||||||||| || ||| |||||| ||||| ||||||||| |||||||| |||||||||||||||||||||||    
T  51749876 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatagtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaatttta 51749975  T
Q  411 agcg 414  Q
    ||||    
T  51749976 agcg 51749979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 213 - 414
Target Start/End: Original strand, 51752103 - 51752305
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt--gaggcaaagcac 309  Q
    ||||||||||||||||||||||| | | |||||| |||||||||||||  | |||||||||||||||||| ||||||||||  |||  ||||||| ||||    
T  51752103 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgatggttgggcaacgtggcacgat-ggaggtttcagttttttgaggcaaggcac 51752200  T
Q  310 tggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttt 409  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| |||||| ||||| |||| |||| |||||||| ||||||||||||||||||||||    
T  51752201 tggaaaaatcgtggcacgatggggccgcatcgtggcacgatggtgcgctggcggcgaataacataaacgtatttttgggtgcagatttgttccaaatttt 51752300  T
Q  410 aagcg 414  Q
    |||||    
T  51752301 aagcg 51752305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 213 - 412
Target Start/End: Original strand, 20302197 - 20302397
Alignment:
Q  213 ttgtgagagttaacttaaaatca-agatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt--gaggcaaagcac 309  Q
    ||||||||||||||||||||||| |  ||||||| ||||| |||| ||  ||  |||||||||||||||| ||||||||||  |||  ||||||| ||||    
T  20302197 ttgtgagagttaacttaaaatcagatttctgcag-aatcgcggcatgatggcaaggcaacgtggcacgat-ggaggtttcagttttttgaggcaaggcac 20302294  T
Q  310 tggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttt 409  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  20302295 tggaaaaattgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacatatttttgggtgcatatttgttccaaatttt 20302394  T
Q  410 aag 412  Q
    |||    
T  20302395 aag 20302397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 246 - 414
Target Start/End: Original strand, 6823655 - 6823824
Alignment:
Q  246 gaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt--gaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtg 343  Q
    ||||| ||||||||  | |||||||||||||||||| ||||||||||  |||  ||||||| |||||||||||||||||||| |||||||||||||||||    
T  6823655 gaatcatggcacgatggttgggcaacgtggcacgat-ggaggtttcagttttttgaggcaaggcactggaaaaatcgtggcatgatggggtcgcatcgtg 6823753  T
Q  344 gcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||| |||||| |||||| ||||| |||| |||| |||||||| |||||||||||||||||||||||||||    
T  6823754 gcacgatggtgcgctggcggcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagcg 6823824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 213 - 414
Target Start/End: Complemental strand, 3580160 - 3579959
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||| ||||||||||||||||| | | ||||||||||||||||||| ||| |||||||||| ||| |||||| ||||||  | ||||||||  || |||    
T  3580160 ttgtgggagttaacttaaaatcaggttatgcaggaatcgtggcacgattgcagggcaacgtgacacaattggatgtttcagttatgaggcaagtcattgg 3580061  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||||||| ||| |||| | ||| |||||||| |||||| |||||| ||||| | || |||| |||||| ||||||| |||||||||||||||||||    
T  3580060 aaaaatcgtggtacggtgggattgcaacgtggcacgatggtgcgctggcggcgaatatcataaacgtattttagagtgcaaatttgttccaaattttaag 3579961  T
Q  413 cg 414  Q
    ||    
T  3579960 cg 3579959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 247 - 414
Target Start/End: Original strand, 13214854 - 13215021
Alignment:
Q  247 aatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggca 346  Q
    |||||||||||||  | |||||||||||||||||||||||||||||  ||||||||||  |||||||    |||||||| |||||| | ||| |||||||    
T  13214854 aatcgtggcacgatggttgggcaacgtggcacgattggaggtttcagttttgaggcaagtcactggatttttcgtggcatgatgggattgcaacgtggca 13214953  T
Q  347 caatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    | |||||||| ||||||| || |||| |||| |||||||| |||||||||||||||||||||||||||    
T  13214954 cgatggtgtgttggcagcaaataacaaaaacgtatttttgggtgcagatttgttccaaattttaagcg 13215021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 213 - 414
Target Start/End: Complemental strand, 30790936 - 30790735
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||| |||||||||| || | |||| || ||||||| ||||  ||| | |||| |||||||||||||| ||||||  | ||| ||||  ||||||    
T  30790936 ttgtgagagctaacttaaaaccaggttctggagaaatcgtgacacgtttgcagagcaatgtggcacgattggatgtttcagttatgaagcaagtcactgg 30790837  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||| |||||||||||||| |||||  ||||||| |||||| |||||  | |||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  30790836 aaaaaacgtggcacgatgggatcgcaatgtggcacgatggtgcgctggaggggaaaaacataaacgtatttttcagtgcagatttgttccaaattttaag 30790737  T
Q  413 cg 414  Q
    ||    
T  30790736 cg 30790735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 213 - 412
Target Start/End: Original strand, 47177077 - 47177274
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactg 311  Q
    ||||||||||||||||||||||| | | |||||| ||||||||||||||  ||||||||||||||||||| |||||||| |  |||  |||||  |||||    
T  47177077 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacgactgggcaacgtggcacgat-ggaggttttagtttttgggcaagacactg 47177174  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||| |  ||||| | |||| |||||||| | ||||||||||| || |||||||    
T  47177175 gaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaata-aaacctatttttgggagcagatttgttacagattttaa 47177273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 211 - 412
Target Start/End: Original strand, 16225884 - 16226083
Alignment:
Q  211 tgttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagca 308  Q
    |||||| |||||||||||||||||| | | |||||| |||||||||||||| | |||||||||||||||||| |||||||| |  |||  || ||| |||    
T  16225884 tgttgtaagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacggttgggcaacgtggcacgat-ggaggttttagttttttgggcaaggca 16225981  T
Q  309 ctggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattt 408  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||| ||||| ||||||||||||| || ||||    
T  16225982 ctggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacata-ttttgggtgcagatttgttacagattt 16226079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 214 - 412
Target Start/End: Original strand, 39462258 - 39462457
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||| | ||||||| ||||||| ||| |  | ||||||||||||||||||| |||||||||  ||||||||||  || ||||    
T  39462258 tgtgagagttaacttaaaatcaggttctgcagaaatcgtgacacaatggttgggcaacgtggcacgattagaggtttcagttttgaggcaagtcagtgga 39462357  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacata-tttttgagtgcagatttgttccaaattttaag 412  Q
        ||||||||||||||| | |||  ||||||| |||||| ||| |||| ||| ||||||||| || |||||| |||||||||||||||||||||||||    
T  39462358 tttttcgtggcacgatgggattgcaatgtggcacgatggtgcgcttgcagtgaataacagaaacgtattttttgggtgcagatttgttccaaattttaag 39462457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 213 - 412
Target Start/End: Original strand, 47179427 - 47179625
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||| |||||||||||||| |||||||||||||||||||| |||||||| |  |||  || ||| |||||    
T  47179427 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcact 47179524  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttta 410  Q
    | ||||||||||||||||||||||| ||||||||||| |||||| ||| || |  ||||| | |||| |||||||| | ||||||||||| || ||||||    
T  47179525 gaaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgcttgcggataaaaata-aaacgtatttttgggagcagatttgttacagatttta 47179623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 414
Target Start/End: Complemental strand, 28207550 - 28207407
Alignment:
Q  271 cgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaa 370  Q
    ||||||||||||||||||||||| ||||||||||  || ||||    || ||||||||||||||| || |||||||| |||||| |||||| ||||| ||    
T  28207550 cgtggcacgattggaggtttcaactttgaggcaagtcattggatttttcatggcacgatggggtcacaacgtggcacgatggtgcgctggcggcgaataa 28207451  T
Q  371 cagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    || |||| | |||||| |||||||||||||||||||||||||||    
T  28207450 cataaacgtttttttgggtgcagatttgttccaaattttaagcg 28207407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 414
Target Start/End: Original strand, 41646717 - 41646860
Alignment:
Q  271 cgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaa 370  Q
    |||||||||||| |||||||||  ||||||||||  |||||||    |||||||||| |||| | ||| |||||||| ||||||  ||||||||||| ||    
T  41646717 cgtggcacgattagaggtttcagttttgaggcaagtcactggatttttcgtggcacggtgggattgcaacgtggcacgatggtgcactggcagcgaataa 41646816  T
Q  371 cagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||||||||||||||||  ||||||||||||||||||||||||||    
T  41646817 cagaaacatatttttggatgcagatttgttccaaattttaagcg 41646860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 213 - 331
Target Start/End: Original strand, 6822774 - 6822893
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt--gaggcaaagcac 309  Q
    ||||||||||||||||||||||| | | |||||| |||||||||||||  |||||||||||||||||||| ||||||||||  |||  ||||||| ||||    
T  6822774 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgatggctgggcaacgtggcacgat-ggaggtttcagttttttgaggcaaggcac 6822871  T
Q  310 tggaaaaatcgtggcacgatgg 331  Q
    ||||||||||||||||||||||    
T  6822872 tggaaaaatcgtggcacgatgg 6822893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 214 - 352
Target Start/End: Original strand, 23783238 - 23783376
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcactg 311  Q
    |||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||||||| |  |||  || ||| ||||||    
T  23783238 tgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacagctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactg 23783335  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatgg 352  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  23783336 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatgg 23783376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 49687301 - 49687418
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||| | | || || |||||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||||  |||||||    
T  49687301 tgtgagagttaacttaaaatcaggttatgtagaaatcgtggcatgatggctgggcaacgtggcacaattggaggtttcagttttgaggcaagtcactgga 49687400  T
Q  314 aaaatcgtggcacgatgg 331  Q
        ||||||||||||||    
T  49687401 tttttcgtggcacgatgg 49687418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 38925996 - 38925920
Alignment:
Q  216 tgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttca 292  Q
    |||||||||||||||||||| | || |||| |||||||| ||||  |||||||||||||||||||||||||||||||    
T  38925996 tgagagttaacttaaaatcaggttccgcagaaatcgtggtacgatggctgggcaacgtggcacgattggaggtttca 38925920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 334 - 414
Target Start/End: Original strand, 47451508 - 47451588
Alignment:
Q  334 tcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||||||| |||||| |||| ||||||| ||||||||| |||||||  ||||||||||||||||||| |||||||    
T  47451508 tcgcatcgtggcacgatggtgcgctgacagcgaataacagaaacgtattttttggtgcagatttgttccaaatattaagcg 47451588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 305
Target Start/End: Original strand, 47451405 - 47451496
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaa 305  Q
    ||||||||||||||| ||||||   | ||||| |||||||||||||  ||||||||| |||||||||||||||||||||  |||||||||||    
T  47451405 tgtgagagttaacttcaaatcagattttgcagaaatcgtggcacgatggctgggcaatgtggcacgattggaggtttcagttttgaggcaaa 47451496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 414
Target Start/End: Original strand, 49687405 - 49687480
Alignment:
Q  339 tcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||||||||| |||||| |||| ||||||| |||| |||| |||||||| |||||||||||||||||||||||||||    
T  49687405 tcgtggcacgatggtgcgctgacagcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagcg 49687480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 414
Target Start/End: Original strand, 6822879 - 6822955
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||| |||||| |||||| ||||| || |||||  |||||||| |||||||||||||||||||||||||||    
T  6822879 atcgtggcacgatggtgcgctggcggcgaataatagaaatgtatttttgggtgcagatttgttccaaattttaagcg 6822955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 317 - 400
Target Start/End: Original strand, 23783362 - 23783444
Alignment:
Q  317 atcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  23783362 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 23783444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 331
Target Start/End: Original strand, 16231373 - 16231458
Alignment:
Q  246 gaatcgtggcacgactgctgggcaacgtggcacgattggaggtttca-agtttgaggcaaagcactggaaaaatcgtggcacgatgg 331  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| |   |||  |||||  |||||||||||||||||||||||||    
T  16231373 gaatcgtggcacgacggctgggcaacgtggcacga-tggaggttttagttttttgggcaagacactggaaaaatcgtggcacgatgg 16231458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 13461392 - 13461347
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacga 259  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||    
T  13461392 tgtgagagttaacttaaaatcaggatctgcaggaatcgtgccacga 13461347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 339 - 412
Target Start/End: Complemental strand, 14098385 - 14098313
Alignment:
Q  339 tcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    |||| |||| |||||| |||||||||||| |||| |||| |||||||| ||||||| |||||||||||||||||    
T  14098385 tcgttgcacgatggtgcgctggcagcgaataacataaacgtatttttgggtgcaga-ttgttccaaattttaag 14098313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 14098511 - 14098443
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgat 281  Q
    |||||||||||||||||||||||   ||||||| |||||||||||||  |||| ||| |||||||||||    
T  14098511 ttgtgagagttaacttaaaatcagattctgcagaaatcgtggcacgatggctgagcaccgtggcacgat 14098443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 414
Target Start/End: Complemental strand, 38925892 - 38925819
Alignment:
Q  341 gtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||||||| |||| | | |||||||||| |||||||   |||||||| |||||||||| ||||||||||||||||    
T  38925892 gtggcacgatggggcgttggcagcgaacaacagaagtgtatttttgggtgcagatttattccaaattttaagcg 38925819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 41646681 - 41646726
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacga 259  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||    
T  41646681 tgtgagagttaacttaaaatcatgttctgcagaaatcgtggcacga 41646726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 413
Target Start/End: Original strand, 16231444 - 16231518
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||| |||||| |||||| |  ||||| | ||||||||||||| ||||||||||||| || |||||||||    
T  16231444 atcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggtgcagatttgttacagattttaagc 16231518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 319
Target Start/End: Original strand, 20291280 - 20291386
Alignment:
Q  214 tgtgagagttaacttaaaatca-agatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttca--agtttgaggcaaagcact 310  Q
    |||||||||||||||||||||| |  |||||| ||||||||||||||  ||  ||||||||||||||  |||||||||||    |||||||||  |||||    
T  20291280 tgtgagagttaacttaaaatcagatttctgca-gaatcgtggcacgatggcaaggcaacgtggcacg-gtggaggtttcagttttttgaggcatggcact 20291377  T
Q  311 ggaaaaatc 319  Q
    |||||||||    
T  20291378 ggaaaaatc 20291386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 28207581 - 28207541
Alignment:
Q  219 gagttaacttaaaatcaagatctgcaggaatcgtggcacga 259  Q
    ||||||||||||||||| | ||||||| |||||||||||||    
T  28207581 gagttaacttaaaatcaggttctgcagaaatcgtggcacga 28207541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 6e-81; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 214 - 414
Target Start/End: Complemental strand, 12517565 - 12517365
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||  |||||||||| | ||||||    
T  12517565 tgtgagagttaacttaaaatcaggatctgcaggaatcgtggcacgatggcaaggcaacgtggcacgattggaggtttcagttttgaggcaatgtactgga 12517466  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12517465 aaaatcgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcaaatttgttccaaattttaagc 12517366  T
Q  414 g 414  Q
    |    
T  12517365 g 12517365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 213 - 414
Target Start/End: Original strand, 27826781 - 27826982
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactg 311  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||| || |||||||||||    
T  27826781 ttgtgagagttaacttaaaatcaggatctgcaggaatcgtggcacgattgctgggcaacgtggcacgat-ggaggtttcattttttgaagcaaagcactg 27826879  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    ||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27826880 gaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcagcgaaaaacaaaaacatatttttgagtgcagatttgttccaaattttaa 27826979  T
Q  412 gcg 414  Q
    |||    
T  27826980 gcg 27826982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 213 - 414
Target Start/End: Original strand, 27829092 - 27829293
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactg 311  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||| |||||||| |||||    
T  27829092 ttgtgagagttaacttaaaatcaggatctgcaggaatcgtggcacgattgctgggcaacgtggcacgat-ggaggtttcattttttgaggcaaaacactg 27829190  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    ||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27829191 gaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcagcgaaaaacaaaaacatatttttgagtgcagatttgttccaaattttaa 27829290  T
Q  412 gcg 414  Q
    |||    
T  27829291 gcg 27829293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 218 - 414
Target Start/End: Original strand, 14807552 - 14807747
Alignment:
Q  218 agagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaa 316  Q
    |||||||||||||||||| | | |||||| |||||||||| ||  | ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14807552 agagttaacttaaaatcaggtttctgcag-aatcgtggcatgatggttgggcaacgtgacacgattggaggtttcaagtttgaggcaaagcactggaaaa 14807650  T
Q  317 atcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||    
T  14807651 atcgtggcacgatggggtcgcatcgtggcacggtggtgcgctggcagcgaaaaacataaacgta-ttttgagtgcagatttgttccaaattttaagcg 14807747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 213 - 413
Target Start/End: Original strand, 44720616 - 44720816
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat--ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcact 310  Q
    ||||||||||||||||||||||| | |  |||||| |||||||||| || |||||||||  |||||||| ||||||||||||  |||||||||| | |||    
T  44720616 ttgtgagagttaacttaaaatcaggttttctgcag-aatcgtggcatgattgctgggcattgtggcacgtttggaggtttcagttttgaggcaaggtact 44720714  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttta 410  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| ||||||||||||| || ||||||    
T  44720715 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagc-aaaaacagaaacatatttttgggtgcagatttgttacagatttta 44720813  T
Q  411 agc 413  Q
    |||    
T  44720814 agc 44720816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 213 - 414
Target Start/End: Original strand, 15072505 - 15072706
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    |||||||||||||||||||||||   ||||||||||||||| |||||  ||||||||||||| |||||||||||||||||  ||||| ||||  |||| |    
T  15072505 ttgtgagagttaacttaaaatcagattctgcaggaatcgtgacacgatggctgggcaacgtgacacgattggaggtttcagttttgaagcaagccactag 15072604  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    |||||||||| ||||||||| ||||| |||||||  |||||| |||||||||||| ||||||||| |||||||| ||||| |||||||||||||||||||    
T  15072605 aaaaatcgtgtcacgatgggatcgcaacgtggcatgatggtgcgctggcagcgaataacagaaacgtatttttgggtgcaaatttgttccaaattttaag 15072704  T
Q  413 cg 414  Q
    ||    
T  15072705 cg 15072706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 218 - 352
Target Start/End: Complemental strand, 28252122 - 28251988
Alignment:
Q  218 agagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaaa 317  Q
    |||||||||||||||||| |||||||||||||||||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28252122 agagttaacttaaaatcaggatctgcaggaatcgtggcacgatggctaggcaacgtggtacgattggaggtttcaagtttgaggcaaagcactggaaaaa 28252023  T
Q  318 tcgtggcacgatggggtcgcatcgtggcacaatgg 352  Q
    ||||||||||||||| |||||||||||||| ||||    
T  28252022 tcgtggcacgatgggatcgcatcgtggcacgatgg 28251988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 213 - 414
Target Start/End: Original strand, 15067776 - 15067977
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||| |||||||||||||||   | |||||||||||||||| ||  |||||||||| ||||||||||||||||||||  ||||| ||||  ||||||    
T  15067776 ttgtgagtgttaacttaaaatcagattttgcaggaatcgtggcaagatggctgggcaacatggcacgattggaggtttcagttttgaagcaagccactgg 15067875  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||| || ||||||||| ||||| |||||||| |||||| |||||||||||| |||| |||| |||||||| |||||||||||||||||||||||||    
T  15067876 aaaaatcatgccacgatgggatcgcaacgtggcacgatggtgcgctggcagcgaataacaaaaacgtatttttgggtgcagatttgttccaaattttaag 15067975  T
Q  413 cg 414  Q
    ||    
T  15067976 cg 15067977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 4423835 - 4424014
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||  ||| |||||| ||||||||    
T  4423835 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacaattgctgggcaacgtggcacaattggaggtttcagttttaaggcaaggcactgga 4423934  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||||||||                     ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4423935 aaaatcgtggcacga---------------------tggtgcgctggcagcgaaaaatagaaacatatttttgagtgcagatttgttccaaattttaagc 4424013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 213 - 409
Target Start/End: Original strand, 18812667 - 18812862
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcact 310  Q
    ||||||||||||||||||||||| | | ||| || |||||||||||||| |||||||||||||||||||| |||||||| |  |||  |||||| |||||    
T  18812667 ttgtgagagttaacttaaaatcaggtttctgaag-aatcgtggcacgacggctgggcaacgtggcacgat-ggaggttttagttttttaggcaaggcact 18812764  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttt 409  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| ||||||||||||| || |||||    
T  18812765 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggtgcagatttgttacagatttt 18812862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 214 - 409
Target Start/End: Original strand, 18810483 - 18810677
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcactg 311  Q
    |||||||||||||||||||||| | | |||||| |||||||||||||| |||||||||||||||||||| |||||||| |  |||  |||||| ||||||    
T  18810483 tgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcaacgtggcacgat-ggaggttttatttttttaggcaaggcactg 18810580  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttt 409  Q
    ||||||| | |||||||||||||| ||||||||||| |||||| |||||| |  ||||| | ||||| ||||||| ||||||||||||| || |||||    
T  18810581 gaaaaattgcggcacgatggggtcacatcgtggcacgatggtgcgctggcggataaaaata-aaacacatttttgggtgcagatttgttacagatttt 18810677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 213 - 361
Target Start/End: Original strand, 43079346 - 43079494
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||| |||||||||||||| ||  |||||||||||||||| |||||||| |  |||  || ||| |||||    
T  43079346 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacggcaaggcaacgtggcacgat-ggaggttttagttttttgggcaaggcact 43079443  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggc 361  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||| ||||||    
T  43079444 ggaaaaatcgtggtacgatggggtctcatcgtggcacgatggtgcgctggc 43079494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 213 - 353
Target Start/End: Original strand, 43081721 - 43081861
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||| |||||||||||||| ||  ||||| |||||||||| |||||||| |  |||  || ||| |||||    
T  43081721 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacggcaaggcaaagtggcacgat-ggaggttttagttttttgggcaaggcact 43081818  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggt 353  Q
    ||||||||||||||||||||||||| ||||||||||| |||||    
T  43081819 ggaaaaatcgtggcacgatggggtctcatcgtggcacgatggt 43081861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 338 - 414
Target Start/End: Complemental strand, 3886336 - 3886257
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatat---ttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||||||| || ||||||||||||||||||| |||||||||||||   ||||| ||||| |||||||||||||||||||||    
T  3886336 atcgtggtacgatggtgtgctggcagcgaataacagaaacatattttttttgggtgcatatttgttccaaattttaagcg 3886257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 414
Target Start/End: Complemental strand, 28251961 - 28251906
Alignment:
Q  358 tggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  28251961 tggcagcgaaaaacagaaacgta-ttttgagtgcagatttgttccaaattttaagcg 28251906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 414
Target Start/End: Complemental strand, 2468511 - 2468437
Alignment:
Q  340 cgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||| |||||| |||||  ||||| ||||||||| ||||||| |||||||||||||||||||| |||||||    
T  2468511 cgtggcacgatggtgcgctggatgcgaataacagaaacgtattttttagtgcagatttgttccaaatgttaagcg 2468437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 3886392 - 3886322
Alignment:
Q  262 gctgggcaacgtggcacgattggaggtttcaagttt--gaggcaaagcactggaaaaatcgtggcacgatgg 331  Q
    ||||| |||||||||||||| ||||||||||  |||  |||||||  ||||||||||||||||| |||||||    
T  3886392 gctggacaacgtggcacgat-ggaggtttcagttttttgaggcaagacactggaaaaatcgtggtacgatgg 3886322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 153; Significance: 6e-81; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 16775897 - 16776097
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||  ||  ||||||||| |||||||||||||||||||||||||||||||||||| |    
T  16775897 tgtgagaattaacttaaaatcaggatctgcaggaatcgtggcacgatggcaaggcaacgtgacacgattggaggtttcaagtttgaggcaaagcactgaa 16775996  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16775997 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcatcgaaaaacagaaacatatttttgagtgaagatttgttccaaattttaagc 16776096  T
Q  414 g 414  Q
    |    
T  16776097 g 16776097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 38881845 - 38882045
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactgg 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |  ||| ||||||| |||||||    
T  38881845 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgattgctgggcaacgtggcacgat-ggaggttttagtttttgaggcaaggcactgg 38881943  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  38881944 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaag 38882043  T
Q  413 cg 414  Q
    ||    
T  38882044 cg 38882045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 218 - 414
Target Start/End: Original strand, 4236374 - 4236569
Alignment:
Q  218 agagttaacttaaaatca-agatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaa 316  Q
    |||||||||||||||||| |  ||||||| ||| |||||||||  |||||||||||||||||||||||||||||||  ||| |||||| |||||||||||    
T  4236374 agagttaacttaaaatcagatttctgcag-aattgtggcacgatggctgggcaacgtggcacgattggaggtttcagttttaaggcaaggcactggaaaa 4236472  T
Q  317 atcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||| ||||| |||||||||||||| |||||| |||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  4236473 atcgtggcacaatgggatcgcatcgtggcacgatggtgcgctggcagggaaaaacagaaacgta-ttttgagtgcagatttgttccaaattttaagcg 4236569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 306 - 413
Target Start/End: Complemental strand, 21684908 - 21684801
Alignment:
Q  306 gcactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaa 405  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21684908 gcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttacaaa 21684809  T
Q  406 ttttaagc 413  Q
    ||||||||    
T  21684808 ttttaagc 21684801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 213 - 414
Target Start/End: Original strand, 21947769 - 21947967
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||  ||| ||||||||| |||||||||||||||||  ||||||| ||  ||||||    
T  21947769 ttgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatggctaggcaacgtgacacgattggaggtttcagttttgaggtaagtcactgg 21947868  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    |     |||||||||||||| | ||| |||||||| ||||||   |||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  21947869 actttacgtggcacgatgggattgcaacgtggcacgatggtg---tggcagcgaataacagaaacatatttttgggtgcagatttgttccaaattttaag 21947965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 213 - 409
Target Start/End: Complemental strand, 34477633 - 34477438
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcact 310  Q
    ||||||||||||||||||||||||| | |||||| |||||||||||||  |||||||||||||||||||| |||||||| |  |||  |||||| |||||    
T  34477633 ttgtgagagttaacttaaaatcaagtttctgcag-aatcgtggcacgatggctgggcaacgtggcacgat-ggaggttttagttttttaggcaaggcact 34477536  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttt 409  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| ||||||||||||| || |||||    
T  34477535 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggtgcagatttgttacagatttt 34477438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 214 - 414
Target Start/End: Complemental strand, 20508001 - 20507801
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||  | |||||||||| |||||||||||||||| |  ||||||||||  || ||||    
T  20508001 tgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatagttgggcaacgtagcacgattggaggttttagttttgaggcaagtcattgga 20507902  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
        ||||||||||||||| | ||| | |||||| | |||| ||| |||||||| |||||||||||||||||| | |||||||||||||||  |||||||    
T  20507901 tttttcgtggcacgatgggattgcaacatggcacgaaggtgcgctagcagcgaataacagaaacatatttttgggagcagatttgttccaagatttaagc 20507802  T
Q  414 g 414  Q
    |    
T  20507801 g 20507801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 213 - 331
Target Start/End: Original strand, 659712 - 659829
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||  ||| |||||||||||||||||||||||||| ||||||||||||  ||||||    
T  659712 ttgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatggctaggcaacgtggcacgattggaggtttc-agtttgaggcaagtcactgg 659810  T
Q  313 aaaaatcgtggcacgatgg 331  Q
    |||||||||||||||||||    
T  659811 aaaaatcgtggcacgatgg 659829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 213 - 413
Target Start/End: Original strand, 31544797 - 31544997
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||  |||||||||||||  |||||||||||||||||||| |||||||| |  |||  || ||| |||||    
T  31544797 ttgtgagagttaacttaaaatcaggtttctgcaa-aatcgtggcacgatagctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcact 31544894  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttta 410  Q
    ||||||||||||||||||||||||| ||||| | ||| |||||| |||||| |  ||||||||||||||||||||| |||||||||| || || ||||||    
T  31544895 ggaaaaatcgtggcacgatggggtctcatcgagacacgatggtgcgctggcggataaaaacagaaacatatttttgggtgcagatttattacagatttta 31544994  T
Q  411 agc 413  Q
    |||    
T  31544995 agc 31544997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 214 - 400
Target Start/End: Original strand, 31542442 - 31542628
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcactg 311  Q
    |||||||||||||||||||||| | | |||||  ||||||| |||||  |||||||||||||||||||| |||||||| |  |||  || ||| ||||||    
T  31542442 tgtgagagttaacttaaaatcaggtttctgcaa-aatcgtgacacgatagctgggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactg 31542539  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    |||||||||||||||||||||||| ||||| | ||| |||||| |||||| |  ||||||||||||||||||||| |||||||||||||    
T  31542540 gaaaaatcgtggcacgatggggtctcatcgagacacgatggtgcgctggcggataaaaacagaaacatatttttgggtgcagatttgtt 31542628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 213 - 400
Target Start/End: Complemental strand, 15355066 - 15354880
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||||||| |  |||  || ||| |||||    
T  15355066 ttgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacagctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcact 15354969  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  15354968 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 15354880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 213 - 400
Target Start/End: Complemental strand, 15357342 - 15357156
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||||||| |  |||  || ||| |||||    
T  15357342 ttgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacagctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcact 15357245  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  15357244 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 15357156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 414
Target Start/End: Original strand, 2174783 - 2174859
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2174783 atcgtggcacgatggtgcactggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 2174859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 400
Target Start/End: Original strand, 10749505 - 10749690
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcactg 311  Q
    |||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||||||| |  |||  || ||| ||||||    
T  10749505 tgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacggctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactg 10749602  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  10749603 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 10749690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 213 - 347
Target Start/End: Complemental strand, 20504453 - 20504319
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||  ||||||||||||||||||||||||||||| |  ||||||||||  || |||    
T  20504453 ttgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatagctgggcaacgtggcacgattggaggttttagttttgaggcaagtcaatgg 20504354  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcac 347  Q
    |    ||||||||||||||| | ||| ||||||||    
T  20504353 atttttcgtggcacgatgggattgcaacgtggcac 20504319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 400
Target Start/End: Original strand, 10756959 - 10757145
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||  |||||| ||||||| |||||||  || |||||||| |||||||| |  |||  || ||| |||||    
T  10756959 ttgtgagagttaacttaaaatcaggtttctgcac-aatcgtagcacgacggctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcact 10757056  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  10757057 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 10757145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 213 - 331
Target Start/End: Complemental strand, 31466497 - 31466379
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||| ||  |||||||||||||||||  || ||||||  | ||||||||  ||||||    
T  31466497 ttgtgagagttaacttaaaatcaggttttgcaggaatcgtggcacgattgaagggcaacgtggcacgatgagatgtttcagttatgaggcaagtcactgg 31466398  T
Q  313 aaaaatcgtggcacgatgg 331  Q
    ||||||| |||||||||||    
T  31466397 aaaaatcttggcacgatgg 31466379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 213 - 400
Target Start/End: Original strand, 23667108 - 23667294
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaag-cact 310  Q
    ||||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||| ||| |  |||  || |||| ||||    
T  23667108 ttgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacagctgggcttcgcggcacgat-ggagtttttatttttttgggaaaggcact 23667205  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    |||||||||||||||||||||| |||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  23667206 ggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 23667294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 214 - 400
Target Start/End: Original strand, 23664834 - 23665019
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaag-cactg 311  Q
    |||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||| ||| |  |||  || |||| |||||    
T  23664834 tgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacagctgggcttcgcggcacgat-ggagtttttatttttttgggaaaggcactg 23664931  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  23664932 gaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 23665019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 214 - 400
Target Start/End: Complemental strand, 23793753 - 23793568
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaag-cactg 311  Q
    |||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||| ||| |  |||  || |||| |||||    
T  23793753 tgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacagctgggcttcgcggcacgat-ggagtttttatttttttgggaaaggcactg 23793656  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  23793655 gaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 23793568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 342 - 413
Target Start/End: Original strand, 39797956 - 39798027
Alignment:
Q  342 tggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||| |||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  39797956 tggcacgatggtgcgctggcagcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagc 39798027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 659929 - 659852
Alignment:
Q  269 aacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcac 347  Q
    |||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||| |||||||    
T  659929 aacgtggcacgattggaggtttca-gtttgaggcaagtcactggaaaaatcgtggcacgatgaggtcgcattgtggcac 659852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 414
Target Start/End: Complemental strand, 25921888 - 25921812
Alignment:
Q  338 atcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||| |||||| |||| ||||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  25921888 atcgtggcacgatggtgcgctgacagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcg 25921812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 331
Target Start/End: Complemental strand, 34479973 - 34479855
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcact 310  Q
    ||||||||||||||||||||||| | | |||||| |||||||||||||  |||||||||||||||||||| |||||||| |  |||  |||||| |||||    
T  34479973 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgatggctgggcaacgtggcacgat-ggaggttttagttttttaggcaaggcact 34479876  T
Q  311 ggaaaaatcgtggcacgatgg 331  Q
    |||||||||||||||||||||    
T  34479875 ggaaaaatcgtggcacgatgg 34479855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 18186587 - 18186497
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaa 304  Q
    |||||||||||||||||||||||| | |||||| |||||||| ||||  |||||||||||||||||||||||||||||||  ||||||||||    
T  18186587 tgtgagagttaacttaaaatcaagtttctgcag-aatcgtggtacgatggctgggcaacgtggcacgattggaggtttcagttttgaggcaa 18186497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 330
Target Start/End: Complemental strand, 12556442 - 12556325
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||| ||||||||| | ||||||| ||||||||||  |  ||||||||||||||||| |||||||||||||  ||||||||||  ||||||    
T  12556442 ttgtgagagttaatttaaaatcaggttctgcagaaatcgtggcataatggctgggcaacgtggcacaattggaggtttcagttttgaggcaagtcactgg 12556343  T
Q  313 aaaaatcgtggcacgatg 330  Q
    |    |||||||||||||    
T  12556342 atttttcgtggcacgatg 12556325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 331
Target Start/End: Complemental strand, 25921992 - 25921874
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt--gaggcaaagcact 310  Q
    |||||||||||||||||||||| | | |||||| |||||||||||||  | ||| |||||||||||||| ||||||||||  |||  ||||||| |||||    
T  25921992 tgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgatggttggacaacgtggcacgat-ggaggtttcagttttttgaggcaaggcact 25921895  T
Q  311 ggaaaaatcgtggcacgatgg 331  Q
    |||||||||||||||||||||    
T  25921894 ggaaaaatcgtggcacgatgg 25921874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 2174680 - 2174797
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcactg 311  Q
    |||||||||||||||||||||| | | |||||| |||||||||||||  ||  |||||||||||||||| ||||||||||  |||  |||||| ||||||    
T  2174680 tgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagttttttaggcaaggcactg 2174777  T
Q  312 gaaaaatcgtggcacgatgg 331  Q
    ||||||||||||||||||||    
T  2174778 gaaaaatcgtggcacgatgg 2174797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 331
Target Start/End: Complemental strand, 2818847 - 2818729
Alignment:
Q  214 tgtgagagttaa-cttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    |||||||||||| |||||||| | | ||||||| |||||||||||||  ||| |||||| ||||||||||||||||||||  ||||||||||  ||||||    
T  2818847 tgtgagagttaaacttaaaattaggttctgcagaaatcgtggcacgatggctaggcaacatggcacgattggaggtttcagttttgaggcaagtcactgg 2818748  T
Q  313 aaaaatcgtggcacgatgg 331  Q
    |    ||||||||||||||    
T  2818747 atttttcgtggcacgatgg 2818729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 339 - 412
Target Start/End: Original strand, 6756359 - 6756432
Alignment:
Q  339 tcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    ||||||||| |||||| |||||||||||| ||||||||| |||||||  |||||||||| ||||||||||||||    
T  6756359 tcgtggcacgatggtgcgctggcagcgaataacagaaacgtattttttggtgcagatttattccaaattttaag 6756432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 307 - 400
Target Start/End: Complemental strand, 31179861 - 31179769
Alignment:
Q  307 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||| |||||| |  ||||| | |||| |||||||| | |||||||||||    
T  31179861 cactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcgggtaaaaata-aaacgtatttttgggagcagatttgtt 31179769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 39797849 - 39797966
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactg 311  Q
    |||||||||||||||||||||| | | |||||  |||||||||||||  |||||||||||||||| ||| ||||||||||  ||| ||||||| |||| |    
T  39797849 tgtgagagttaacttaaaatcaggtttctgcat-aatcgtggcacgatggctgggcaacgtggcatgat-ggaggtttcagtttttgaggcaaggcaccg 39797946  T
Q  312 gaaaaatcgtggcacgatgg 331  Q
    |||||||| |||||||||||    
T  39797947 gaaaaatcatggcacgatgg 39797966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 414
Target Start/End: Complemental strand, 36402741 - 36402667
Alignment:
Q  339 tcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||||||||| |||||| | ||||| |||| ||||||||| |||||||| ||||||||||||| |||||||||||||    
T  36402741 tcgtggcacgatggtgcgttggcaacgaataacagaaacgtatttttgggtgcagatttgtt-caaattttaagcg 36402667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 414
Target Start/End: Complemental strand, 2818731 - 2818675
Alignment:
Q  358 tggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||||| |||| |||| |||||| | |||||||||||||||||||||||||||    
T  2818731 tggcagcgaataacaaaaacgtattttcgggtgcagatttgttccaaattttaagcg 2818675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 278
Target Start/End: Complemental strand, 21684972 - 21684905
Alignment:
Q  211 tgttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcac 278  Q
    ||||||||||||||||||||||||| | | |||||| |||||||||||||  |||||||||||||||||    
T  21684972 tgttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgatggctgggcaacgtggcac 21684905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 331
Target Start/End: Original strand, 6756257 - 6756372
Alignment:
Q  216 tgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactggaaa 315  Q
    |||| ||||| ||||||||| | ||| ||| |||||||||||||   ||||  ||| |||||||||| |||||||||| ||||||||||  |||||||      
T  6756257 tgagggttaatttaaaatcaggttctacagaaatcgtggcacgatgcctggataacatggcacgattagaggtttcaactttgaggcaagtcactggatt 6756356  T
Q  316 aatcgtggcacgatgg 331  Q
      ||||||||||||||    
T  6756357 tttcgtggcacgatgg 6756372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 414
Target Start/End: Complemental strand, 12556337 - 12556262
Alignment:
Q  339 tcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||||||||| ||| || |||||||||||| ||||||||  |||||||| || |||||||||| |||| ||||||||    
T  12556337 tcgtggcacgatgatgcgctggcagcgaataacagaaatgtatttttgtgtacagatttgtttcaaaatttaagcg 12556262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 379 - 414
Target Start/End: Complemental strand, 31466352 - 31466317
Alignment:
Q  379 tatttttgagtgcagatttgttccaaattttaagcg 414  Q
    |||||||| |||||||||||||||||||||||||||    
T  31466352 tatttttgggtgcagatttgttccaaattttaagcg 31466317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 661286 - 661246
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtgg 254  Q
    |||||||||||||||||||||| | ||||||| ||||||||    
T  661286 tgtgagagttaacttaaaatcaggttctgcagaaatcgtgg 661246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 23742256 - 23742212
Alignment:
Q  309 ctggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggt 353  Q
    |||||||| |||||||||||| || || |||||||||||||||||    
T  23742256 ctggaaaattcgtggcacgataggatcacatcgtggcacaatggt 23742212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 213 - 414
Target Start/End: Original strand, 2628 - 2829
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgg 312  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||  |||||||||| | |||||    
T  2628 ttgtgagagttaacttaaaatcaagatctgcaggaattgtgacacgattgctaggcaacgtggcacgattggaggtttcagttttgaggcaaggtactgg 2727  T
Q  313 aaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaag 412  Q
    |||||||||||||||||||| |||||||||||||| |||||| |||||||||||| |||| |||| |||||||| |||||||||||||||||||||||||    
T  2728 aaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcagcgaataacataaacgtatttttgggtgcagatttgttccaaattttaag 2827  T
Q  413 cg 414  Q
    ||    
T  2828 cg 2829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 2e-71; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 214 - 414
Target Start/End: Complemental strand, 15530661 - 15530461
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  |||||| |||||||||| ||||||||||||||||||||||||||||||| ||    
T  15530661 tgtgagagttaacttaaaatcaggatctgcaggaatcgtggcacgatggctgggtaacgtggcacaattggaggtttcaagtttgaggcaaagcactcga 15530562  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    ||| |||||| ||||||||| ||||||||||||| ||||||||||||||| |||  | ||||||||||||||| |||||| |||||||||||||||||||    
T  15530561 aaattcgtggtacgatggggccgcatcgtggcacgatggtgtgctggcagtgaattatagaaacatatttttgggtgcaggtttgttccaaattttaagc 15530462  T
Q  414 g 414  Q
    |    
T  15530461 g 15530461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 213 - 412
Target Start/End: Complemental strand, 19227949 - 19227749
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactg 311  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||  | |||||||||||||| ||| ||||||||||| ||| ||||||| ||||||    
T  19227949 ttgtgagagttaacttaaaattaagatctgcaggaatcgtggcacgatggttgggcaacgtggcatgat-ggaggtttcaatttttgaggcaaggcactg 19227851  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatat-ttttgagtgcagatttgttccaaatttta 410  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  19227850 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacatattttttgggtgcagatttgttccaaatttta 19227751  T
Q  411 ag 412  Q
    ||    
T  19227750 ag 19227749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 8995255 - 8995454
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||  |||||||||||||||||||||||||||||||  |||  ||||| ||||||||    
T  8995255 tgtgagagttaacttaaaatcaggatctgtaggaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttttgggcaaggcactgga 8995354  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||| |||| || ||||||||| || ||||| ||||||||||||||||||||||||||    
T  8995355 aaaatcgtggcacgatggggtcacatcgtggcacgatggtgcgctgacagcaaataacagaaacgta-ttttgggtgcagatttgttccaaattttaagc 8995453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 214 - 414
Target Start/End: Original strand, 9019702 - 9019901
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||  |||||||||||||||||||||||||||||||  |||  ||||| ||||||||    
T  9019702 tgtgagagttaacttaaaatcaggatctgtaggaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttttgggcaaggcactgga 9019801  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||| |||| || ||||||||| || ||||| ||||||||||||||||||||||||||    
T  9019802 aaaatcgtggcacgatggggtcacatcgtggcacgatggtgcgctgacagcaaataacagaaacgta-ttttgggtgcagatttgttccaaattttaagc 9019900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 214 - 414
Target Start/End: Complemental strand, 14507716 - 14507514
Alignment:
Q  214 tgtgagagttaacttaaaatca-agatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagttt---gaggcaaagcac 309  Q
    |||||||||||||||||||||| |  ||||||| |||||||||||||  |||||||||||||||||||| ||||||||||  |||   ||  ||| ||||    
T  14507716 tgtgagagttaacttaaaatcagatttctgcag-aatcgtggcacgatggctgggcaacgtggcacgat-ggaggtttcagtttttttgatacaaggcac 14507619  T
Q  310 tggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttt 409  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14507618 tggaaaaatggtggcacgatggggtcgcatcgtggcacgatggtgcgctgccagcgaaaaacagaaacatatttttgagtgtagatttgttccaaatttt 14507519  T
Q  410 aagcg 414  Q
    |||||    
T  14507518 aagcg 14507514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 213 - 411
Target Start/End: Complemental strand, 11983567 - 11983371
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactg 311  Q
    |||| |||||||||||||||||| | | |||||| |||||||| ||||  | |||||||| ||| ||||| ||||||||||  | ||||| || ||||||    
T  11983567 ttgtaagagttaacttaaaatcaggtttctgcag-aatcgtggtacgatggttgggcaacatggtacgat-ggaggtttcagttgtgaggtaa-gcactg 11983471  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11983470 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtttcaaattttaa 11983371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 271 - 409
Target Start/End: Complemental strand, 4816749 - 4816612
Alignment:
Q  271 cgtggcacgattggaggtttcaagtttgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaa 370  Q
    ||||||||||||||||||||||  |||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  4816749 cgtggcacgattggaggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgtgctggtagc-aaaaa 4816651  T
Q  371 cagaaacatatttttgagtgcagatttgttccaaatttt 409  Q
    |||||||||||||||  ||||||||||||| || |||||    
T  4816650 cagaaacatattttttggtgcagatttgttacagatttt 4816612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 213 - 400
Target Start/End: Original strand, 33308684 - 33308870
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||| |||||||||||||| |||||||  ||||||||||| |||||||| |  |||  || ||| |||||    
T  33308684 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcttcgtggcacgat-ggaggttttagttttttgggcaaggcact 33308781  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  33308782 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 33308870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 213 - 400
Target Start/End: Original strand, 33310953 - 33311139
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||| |||||||||||||| |||||||  ||||||||||| |||||||| |  |||  || ||| |||||    
T  33310953 ttgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacggctgggcttcgtggcacgat-ggaggttttagttttttgggcaaggcact 33311050  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  33311051 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 33311139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 213 - 400
Target Start/End: Complemental strand, 26066612 - 26066426
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagt-ttgaggcaaagcact 310  Q
    ||||||||||||||||||||||| | | ||| || |||||||||||||| ||  |||||||||||||||| |||||||| |  | ||  ||||| |||||    
T  26066612 ttgtgagagttaacttaaaatcaggtttctgtag-aatcgtggcacgacggcaaggcaacgtggcacgat-ggaggttttagttatttgggcaaggcact 26066515  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||| |  ||||| | |||| |||||||| | |||||||||||    
T  26066514 ggaaaaatcgtggcacgatggggtctcatcgtggcacaatggtgcgctggcggataaaaata-aaacgtatttttgggagcagatttgtt 26066426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 297 - 414
Target Start/End: Complemental strand, 30729284 - 30729167
Alignment:
Q  297 tgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatt 396  Q
    ||||||||  |||||||||  ||||| |||||||||||| || |||||||| || ||| |||||||||||| ||||||||| |||||||| |||||||||    
T  30729284 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaacgtggcacgatagtgcgctggcagcgaataacagaaacgtatttttgggtgcagatt 30729185  T
Q  397 tgttccaaattttaagcg 414  Q
    ||||||||||||||||||    
T  30729184 tgttccaaattttaagcg 30729167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 400
Target Start/End: Complemental strand, 29755279 - 29755094
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcactg 311  Q
    |||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||||||| |  |||  || ||| ||||||    
T  29755279 tgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacggctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcactg 29755182  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  29755181 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 29755094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 214 - 400
Target Start/End: Complemental strand, 26068882 - 26068697
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcactg 311  Q
    |||||||||||||||||||||| | | |||||| |||||||||||||| ||  |||||||||||| ||| |||||||| |  |||  || ||| ||||||    
T  26068882 tgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgacggcaaggcaacgtggcatgat-ggaggttttagttttttgggcaaggcactg 26068785  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||| |  ||||| | |||| |||||||| | |||||||||||    
T  26068784 gaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaata-aaacgtatttttgggagcagatttgtt 26068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 32279794 - 32279910
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    |||||||||||||||||||||| | |||||||||| |||| ||||| || |||||||||||||||||||||| ||||||  | ||||||||  | |||||    
T  32279794 tgtgagagttaacttaaaatca-gttctgcaggaaacgtgacacgattgttgggcaacgtggcacgattggatgtttcagttctgaggcaagtcgctgga 32279892  T
Q  314 aaaatcgtggcacgatgg 331  Q
    ||| ||||||||||||||    
T  32279893 aaagtcgtggcacgatgg 32279910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 1072395 - 1072305
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaa 304  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||  | ||||||||||||||||||||||||||| |  ||||||||||    
T  1072395 tgtgagagttaacttaaaatcaggttctgcagaaatcgtggtacgatggttgggcaacgtggcacgattggaggtttaagttttgaggcaa 1072305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 413
Target Start/End: Complemental strand, 24192733 - 24192635
Alignment:
Q  315 aaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||| ||||||||| | |||  ||||||  |||| | |||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||    
T  24192733 aaatcgtgccacgatgggattgcaatgtggcatgatggggcgctggcagcgaataacagaaacatatttttcagtgcaaatttgttccaaattttaagc 24192635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 307 - 412
Target Start/End: Complemental strand, 15541586 - 15541481
Alignment:
Q  307 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaat 406  Q
    |||||||||  || || ||||||| | ||||| |||||||| |||||  |||||||||||| | |||||||||||||||  |||||||||||||||||||    
T  15541586 cactggaaatttcatgccacgatgagatcgcaacgtggcacgatggtacgctggcagcgaatagcagaaacatatttttaggtgcagatttgttccaaat 15541487  T
Q  407 tttaag 412  Q
    ||||||    
T  15541486 tttaag 15541481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 412
Target Start/End: Complemental strand, 15533137 - 15533022
Alignment:
Q  297 tgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatt 396  Q
    ||||||||  |||||||||  | ||| ||||||| | ||||| |||| |||||||||| ||||| ||| || || ||||||||||||||  |||||||||    
T  15533137 tgaggcaagtcactggaaattttgtgccacgatgagatcgcaacgtgtcacaatggtgcgctggtagcaaataagagaaacatatttttaggtgcagatt 15533038  T
Q  397 tgttccaaattttaag 412  Q
    ||||||||||||||||    
T  15533037 tgttccaaattttaag 15533022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 414
Target Start/End: Original strand, 32279897 - 32279972
Alignment:
Q  339 tcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcg 414  Q
    ||||||||| |||||| |||||| ||||| |||| |||  ||||||||||||||||||||||||||||||||||||    
T  32279897 tcgtggcacgatggtgcgctggcggcgaataacataaatgtatttttgagtgcagatttgttccaaattttaagcg 32279972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 413
Target Start/End: Complemental strand, 24191636 - 24191538
Alignment:
Q  315 aaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||| ||||||||| | |||  |||| |  |||| | |||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||    
T  24191636 aaatcgtgccacgatgggattgcaatgtggtatgatggggcgctggcagcgaataacagaaacatatttttcagtgcaaatttgttccaaattttaagc 24191538  T

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Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 1072271 - 1072217
Alignment:
Q  359 ggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    ||||||||| |||| |||| |||||||| ||||||||||||||||||||||||||    
T  1072271 ggcagcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagc 1072217  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 15533221 - 15533175
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacga 259  Q
    ||||||||||||||||||||||| ||||| ||| ||||||| |||||    
T  15533221 ttgtgagagttaacttaaaatcaggatctacagaaatcgtgccacga 15533175  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 15541679 - 15541634
Alignment:
Q  214 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacga 259  Q
    |||||||||||||||||||||| ||| ||||| ||||||| |||||    
T  15541679 tgtgagagttaacttaaaatcaggatttgcagaaatcgtgccacga 15541634  T

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Target: scaffold0025 (Bit Score: 131; Significance: 8e-68; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 213 - 414
Target Start/End: Complemental strand, 69834 - 69634
Alignment:
Q  213 ttgtgagagttaacttaaaatca-agatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactg 311  Q
    |||| |||||||||||||||||| |  ||||||| |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  69834 ttgtaagagttaacttaaaatcagatttctgcag-aatcgtggcacgatggctaggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactg 69736  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    |||||||||| |||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  69735 gaaaaatcgtagcacaatgggatcgcatcgttgcacgatggtgtgctggcagcgaaaaacagaaacata-ttttgggtgcagatttgttccaaattttaa 69637  T
Q  412 gcg 414  Q
    |||    
T  69636 gcg 69634  T

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Target: scaffold0025; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 213 - 412
Target Start/End: Complemental strand, 73545 - 73368
Alignment:
Q  213 ttgtgagagttaacttaaaatca-agatctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactg 311  Q
    |||| |||||||||||||||||| |  | ||||| |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  73545 ttgtaagagttaacttaaaatcagatttatgcag-aatcgtggcacgatggctaggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactg 73447  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    ||||||| |||||||||                     ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  73446 gaaaaattgtggcacga---------------------tggtgtgctggcagcgaaaaacagaaacata-ttttgggtgcagatttgttccaaattttaa 73369  T

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Target: scaffold0131 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 215 - 414
Target Start/End: Original strand, 14768 - 14968
Alignment:
Q  215 gtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgaggcaaagcactgga 313  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| ||  ||||||||||| ||||| ||| ||||||  | ||||||||  |||||||    
T  14768 gtgagagttaacttaaaatcaggattctgcaggaatcgtggcacgattgaagggcaacgtggaacgatgggaagtttcagttatgaggcaagtcactgga 14867  T
Q  314 aaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    ||  ||||||||||||||| || || |||| ||| |||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  14868 aatttcgtggcacgatgggatcacaacgtgacacgatggtgcgctggcagcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagc 14967  T
Q  414 g 414  Q
    |    
T  14968 g 14968  T

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Target: scaffold0068 (Bit Score: 96; Significance: 6e-47; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 306 - 413
Target Start/End: Original strand, 29002 - 29109
Alignment:
Q  306 gcactggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaa 405  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29002 gcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttacaaa 29101  T
Q  406 ttttaagc 413  Q
    ||||||||    
T  29102 ttttaagc 29109  T

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Target: scaffold0068; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 278
Target Start/End: Original strand, 28938 - 29005
Alignment:
Q  211 tgttgtgagagttaacttaaaatcaag-atctgcaggaatcgtggcacgactgctgggcaacgtggcac 278  Q
    ||||||||||||||||||||||||| |  |||||| ||||||||||||||  |||||||||||||||||    
T  28938 tgttgtgagagttaacttaaaatcaggtttctgca-gaatcgtggcacgatggctgggcaacgtggcac 29005  T

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Target: scaffold0472 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 214 - 413
Target Start/End: Original strand, 5927 - 6125
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttg-aggcaaagcactg 311  Q
    |||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||||||| |  |||  |||||| ||||||    
T  5927 tgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacggctgggcttcgcggcacgat-ggaggttttagttttttaggcaaggcactg 6024  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaa 411  Q
    |||||||||||||| ||||||||| |||| |||||| |||||| |||||| |  ||||| | ||||||||||||| ||||||||||||| ||||||| ||    
T  6025 gaaaaatcgtggcatgatggggtctcatcatggcacgatggtgcgctggcggataaaaata-aaacatatttttgggtgcagatttgttacaaatttaaa 6123  T

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Target: scaffold0140 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 213 - 400
Target Start/End: Original strand, 21914 - 22100
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||||||| |  |||  || ||| |||||    
T  21914 ttgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacagctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcact 22011  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  22012 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 22100  T

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Target: scaffold0140; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 213 - 400
Target Start/End: Original strand, 24189 - 24375
Alignment:
Q  213 ttgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcact 310  Q
    ||||||||||||||||||||||| | | |||||  |||||||||||||| |||||||  || |||||||| |||||||| |  |||  || ||| |||||    
T  24189 ttgtgagagttaacttaaaatcaggtttctgcac-aatcgtggcacgacagctgggcttcgcggcacgat-ggaggttttagttttttgggcaaggcact 24286  T
Q  311 ggaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||| | ||||||||||||| | |||||||||||    
T  24287 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttgggagcagatttgtt 24375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 214 - 400
Target Start/End: Complemental strand, 13054 - 12869
Alignment:
Q  214 tgtgagagttaacttaaaatcaagat-ctgcaggaatcgtggcacgactgctgggcaacgtggcacgattggaggtttcaagtttgagg-caaagcactg 311  Q
    |||||||||||||||||||||| | | |||||| |||||||||||||   |  |||||||||||||||| |||||||| |  |||  || ||| ||||||    
T  13054 tgtgagagttaacttaaaatcaggtttctgcag-aatcgtggcacgatgtcaaggcaacgtggcacgat-ggaggttttagttttttgggcaaggcactg 12957  T
Q  312 gaaaaatcgtggcacgatggggtcgcatcgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtt 400  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||| |  ||||| | |||| |||||||| | |||||||||||    
T  12956 gaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaata-aaacgtatttttgggagcagatttgtt 12869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 413
Target Start/End: Original strand, 3872 - 3945
Alignment:
Q  340 cgtggcacaatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagc 413  Q
    |||||||| |||||| | |||||||||| |||| |||| |||||||| ||||||||||||| ||||||||||||    
T  3872 cgtggcacgatggtgcgatggcagcgaataacataaacgtatttttgggtgcagatttgtttcaaattttaagc 3945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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