View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0884_low_11 (Length: 304)
Name: NF0884_low_11
Description: NF0884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0884_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 74 - 249
Target Start/End: Original strand, 2487639 - 2487814
Alignment:
| Q |
74 |
atcatcaggcttctggagcagcagcacttttgaaaaggatcatagtgaagctcggtcgcggagaagtgtttcttcgagtggaataacgatgagtatttct |
173 |
Q |
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| T |
2487639 |
atcatcaggcttctggagcagcagcacttttgaaaaggatcatagtgaagctcggtcgcggagaagtgtttcttcgagtggaataacgatgagtatttct |
2487738 |
T |
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| Q |
174 |
tctgatcttcaaagtagttcgagcagtcaaattagtcctcctgaatctgtcaaccaaggcatgtttatgttatttc |
249 |
Q |
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| T |
2487739 |
tctgatcttcaaagtagttcgagcagtcaaattagtcctcctgaatctgtcaaccaaggcatgtttatgttatttc |
2487814 |
T |
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