View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0884_low_13 (Length: 255)
Name: NF0884_low_13
Description: NF0884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0884_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 7 - 251
Target Start/End: Original strand, 16496648 - 16496892
Alignment:
| Q |
7 |
tccaataatatctcaagatttgcttcgaacatcttctctgcttcaaaccttaattattcttccaatcgcaacaaaacttgggatcttctctgcttcaatt |
106 |
Q |
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| T |
16496648 |
tccaataatatctcaagatttgcttcgaacatcttctctgcttcaaaccttaattattcttccaatcgcaacaaaacttgggatcttctctgcttcaatt |
16496747 |
T |
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| Q |
107 |
tctctgaaaagtgggttatagatgtaagtgctatggtgttaaaagtaaatttggacgttgttgtggtgatgaggataaacatgaagtttagatgaccatc |
206 |
Q |
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|||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
16496748 |
tctctgaagagtgggttatagatgtaagtgttatggtgttaaaagtaaatttggacgttgttgtggtgatgaggataataatgaagtttagatgaccatc |
16496847 |
T |
|
| Q |
207 |
gaccatttagtgtagttagattatgctaatagttatttatcattg |
251 |
Q |
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| T |
16496848 |
gaccatttagtatagttagattatgctaatagttatttatcattg |
16496892 |
T |
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