View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0884_low_3 (Length: 401)

Name: NF0884_low_3
Description: NF0884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0884_low_3
NF0884_low_3
[»] chr6 (11 HSPs)
chr6 (54-392)||(9170733-9171041)
chr6 (54-392)||(9159387-9159695)
chr6 (98-392)||(7012765-7013059)
chr6 (98-392)||(7025701-7025995)
chr6 (183-392)||(7029843-7030052)
chr6 (118-299)||(7041467-7041642)
chr6 (103-269)||(7046795-7046955)
chr6 (320-392)||(7041639-7041711)
chr6 (320-390)||(212966-213036)
chr6 (332-392)||(7046985-7047045)
chr6 (244-280)||(213067-213103)
[»] chr5 (3 HSPs)
chr5 (125-392)||(18571086-18571341)
chr5 (194-280)||(33541693-33541779)
chr5 (316-392)||(33541806-33541882)
[»] chr3 (29 HSPs)
chr3 (118-256)||(9494821-9494953)
chr3 (190-275)||(9343882-9343967)
chr3 (190-275)||(9448351-9448436)
chr3 (118-171)||(9617555-9617608)
chr3 (109-251)||(41985590-41985726)
chr3 (120-283)||(9329809-9329966)
chr3 (120-283)||(9336513-9336670)
chr3 (128-251)||(9655375-9655492)
chr3 (128-251)||(9646382-9646499)
chr3 (190-277)||(9695608-9695695)
chr3 (192-277)||(9395298-9395383)
chr3 (109-234)||(9407328-9407447)
chr3 (118-171)||(9425544-9425597)
chr3 (109-251)||(9432858-9432994)
chr3 (227-270)||(9613916-9613959)
chr3 (190-269)||(41980891-41980970)
chr3 (104-178)||(9402336-9402410)
chr3 (104-178)||(9420575-9420649)
chr3 (197-251)||(9626498-9626552)
chr3 (200-251)||(9340718-9340769)
chr3 (310-392)||(9343993-9344075)
chr3 (228-270)||(9348101-9348143)
chr3 (118-171)||(9614045-9614098)
chr3 (118-159)||(9626584-9626625)
chr3 (197-261)||(9352945-9353009)
chr3 (109-153)||(9397747-9397791)
chr3 (194-234)||(9416614-9416654)
chr3 (194-234)||(9441816-9441856)
chr3 (229-269)||(9485969-9486009)
[»] chr1 (10 HSPs)
chr1 (129-263)||(235195-235323)
chr1 (104-273)||(8814358-8814521)
chr1 (109-175)||(4439822-4439888)
chr1 (121-277)||(246841-246991)
chr1 (125-263)||(251400-251532)
chr1 (189-277)||(231617-231705)
chr1 (109-263)||(4428593-4428741)
chr1 (334-392)||(247033-247091)
chr1 (320-369)||(235374-235423)
chr1 (118-175)||(18991175-18991232)
[»] chr2 (1 HSPs)
chr2 (118-256)||(20694314-20694446)
[»] chr8 (1 HSPs)
chr8 (190-269)||(44688785-44688864)
[»] chr7 (1 HSPs)
chr7 (230-278)||(450102-450150)


Alignment Details
Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 54 - 392
Target Start/End: Original strand, 9170733 - 9171041
Alignment:
Q  54 catcatccaagtccaaaacatataactcacattcagaagacatagattcaaagatatcatcatcaaagatgacacaattccctttggaaacacacaaatc 153  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||               || ||||||||||| |||||||||||||||    
T  9170733 catcatccaagtccaaaacatataactcacgttcggaagacatagattcaaagat---------------gatacaattcccttgggaaacacacaaatc 9170817  T
Q  154 tgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcatta 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9170818 tgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcatta 9170917  T
Q  254 agcttaaacaaatcaatccttacaggaacattaagatcaggatcattaagatcaatacaaagacaatcataaacgtccgctaacaacaaatatccctcgc 353  Q
    ||||||||||||||||||||||               |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9170918 agcttaaacaaatcaatcctta---------------caggatcattaagatcaatacaaagacaatcataaacgtccgctaacaacaaatctccctcgc 9171002  T
Q  354 tctccactaagaatttcatgttcccaccaccaaccaaag 392  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9171003 tctccactaagaatttcatgttcccaccaccaaccaaag 9171041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 54 - 392
Target Start/End: Complemental strand, 9159695 - 9159387
Alignment:
Q  54 catcatccaagtccaaaacatataactcacattcagaagacatagattcaaagatatcatcatcaaagatgacacaattccctttggaaacacacaaatc 153  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||               || |||||||||||||||||||||||||||    
T  9159695 catcatccaagtccaaaacatataactcacgttcggaagacatagattcaaagat---------------gatacaattccctttggaaacacacaaatc 9159611  T
Q  154 tgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcatta 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9159610 tgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcgtta 9159511  T
Q  254 agcttaaacaaatcaatccttacaggaacattaagatcaggatcattaagatcaatacaaagacaatcataaacgtccgctaacaacaaatatccctcgc 353  Q
    ||||||||||||||||||||||||||| |||||||               |||||||| ||||||||||||| | |||| ||||||||||| ||||||||    
T  9159510 agcttaaacaaatcaatccttacaggatcattaag---------------atcaatactaagacaatcataagcctccgataacaacaaatctccctcgc 9159426  T
Q  354 tctccactaagaatttcatgttcccaccaccaaccaaag 392  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  9159425 tctccactaagaattttatgttcccaccaccaaccaaag 9159387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 98 - 392
Target Start/End: Original strand, 7012765 - 7013059
Alignment:
Q  98 gattcaaagatatcatcatcaaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaaga 197  Q
    ||||||||||||| || || |||||||||| |||||||||||| |||||||||||| |||||| |  ||||||||||| |||||||||||||||||||||    
T  7012765 gattcaaagatataattattaaagatgacagaattccctttggcaacacacaaatccgaagcacaggcagaaaacgaacataccaaccccaaccccaaga 7012864  T
Q  198 acaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaatccttacaggaacattaagatcaggatc 297  Q
    |||||| |||||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  7012865 acaaaatcctatctcctaaacttgtcaacttcacccacttcttctccttctcattaagcttaaacaaatcaattcttacaggatctttaagatcaggatc 7012964  T
Q  298 attaagatcaatacaaagacaatcataaacgtccgctaacaacaaatatccctcgctctccactaagaatttcatgttcccaccaccaaccaaag 392  Q
       ||||||| ||||||||||||||||||| || |||||||||||||   ||||||||||||||||||||||||||| ||| |||||||||||||    
T  7012965 taaaagatcagtacaaagacaatcataaacatctgctaacaacaaatcctcctcgctctccactaagaatttcatgtccccgccaccaaccaaag 7013059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 98 - 392
Target Start/End: Original strand, 7025701 - 7025995
Alignment:
Q  98 gattcaaagatatcatcatcaaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaaga 197  Q
    ||||||||||||| || || |||||||||| |||||||||||| ||||||||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  7025701 gattcaaagatataattattaaagatgacagaattccctttggcaacacacaaatctgaagcacaagcagaaaacgaacataccaaccccaaccccaaga 7025800  T
Q  198 acaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaatccttacaggaacattaagatcaggatc 297  Q
    ||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||| |||| ||||     
T  7025801 acaaaaccctatctcctaaactcgtcaacttcacccacttcttctccttctcattaagcttaaacaaatcaatccttacacaatcattatgatcgggatt 7025900  T
Q  298 attaagatcaatacaaagacaatcataaacgtccgctaacaacaaatatccctcgctctccactaagaatttcatgttcccaccaccaaccaaag 392  Q
    |  ||||||| || ||||||||| |||||| ||||||||||||||||  |||||||||||||||||||||||||||| ||| || |||| |||||    
T  7025901 acaaagatcagtaaaaagacaattataaacatccgctaacaacaaatccccctcgctctccactaagaatttcatgtccccgccgccaatcaaag 7025995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 183 - 392
Target Start/End: Original strand, 7029843 - 7030052
Alignment:
Q  183 accccaaccccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaatccttacaggaac 282  Q
    ||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  7029843 accccaaccccaagaacaaaaccctatccccgaaactcgtcaacttcacccacttcttctccttctcattaagcttaaacaaatcaatccttacacgatc 7029942  T
Q  283 attaagatcaggatcattaagatcaatacaaagacaatcataaacgtccgctaacaacaaatatccctcgctctccactaagaatttcatgttcccacca 382  Q
    |||| |||   ||| || ||||||| || |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||  || ||||||    
T  7029943 attatgattgagattataaagatcagtaaaaagacaatcataaacatccgctaacaacaaatccccctcgctctccactaagaatttcacatttccacca 7030042  T
Q  383 ccaaccaaag 392  Q
    ||||||||||    
T  7030043 ccaaccaaag 7030052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 118 - 299
Target Start/End: Original strand, 7041467 - 7041642
Alignment:
Q  118 aaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaa 217  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||| |||||| ||||    ||||      |||||||||||||||||||||||    
T  7041467 aaagatgacacaattccctttggcaacgcacaaatccgaagcagaaacagagaacgaacatacttctccca------agaacaaaaccctatcccctaaa 7041560  T
Q  218 ctcgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaatccttacaggaacattaagatcaggatcat 299  Q
    || || || ||||||||||||||||||||||||||||| |||||||||||||||| ||||| | | ||||||||||| ||||    
T  7041561 ctagtcaacttcacccacttcttctccttctcattaagtttaaacaaatcaatccatacagaatcgttaagatcagggtcat 7041642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 103 - 269
Target Start/End: Original strand, 7046795 - 7046955
Alignment:
Q  103 aaagatatcatcatcaaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaa 202  Q
    |||||||||| ||  || ||| |||||||||||||||| |||| |||||||||||  |||| ||||||||||| ||   | ||||      |||||||||    
T  7046795 aaagatatcagcactaatgatcacacaattccctttggcaacatacaaatctgaaaaagaagcagaaaacgaacattttatcccc------aagaacaaa 7046888  T
Q  203 accctatcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaa 269  Q
    ||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7046889 actttatcccctaaactcgttaacttcacccacttcttctccttctcattaagcttaaacaaatcaa 7046955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 320 - 392
Target Start/End: Original strand, 7041639 - 7041711
Alignment:
Q  320 tcataaacgtccgctaacaacaaatatccctcgctctccactaagaatttcatgttcccaccaccaaccaaag 392  Q
    |||||||| |||||||||||||||| ||||| ||| ||| ||||||||||| |||| |||| |||||||||||    
T  7041639 tcataaacatccgctaacaacaaatctcccttgctttccgctaagaatttcttgtttccacgaccaaccaaag 7041711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 390
Target Start/End: Complemental strand, 213036 - 212966
Alignment:
Q  320 tcataaacgtccgctaacaacaaatatccctcgctctccactaagaatttcatgttcccaccaccaaccaa 390  Q
    |||||||| ||  ||||||||||||  |||||||||||||||||||||||||||   |||||| |||||||    
T  213036 tcataaacatctactaacaacaaatcaccctcgctctccactaagaatttcatgcctccaccatcaaccaa 212966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 7046985 - 7047045
Alignment:
Q  332 gctaacaacaaatatccctcgctctccactaagaatttcatgttcccaccaccaaccaaag 392  Q
    |||||||||||||  || |||||||||||||| |||||| ||||| |||||||| ||||||    
T  7046985 gctaacaacaaatccccatcgctctccactaataatttcttgttctcaccaccatccaaag 7047045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 213103 - 213067
Alignment:
Q  244 cttctcattaagcttaaacaaatcaatccttacagga 280  Q
    |||||||||||||||||||| || |||||||||||||    
T  213103 cttctcattaagcttaaacacatgaatccttacagga 213067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 125 - 392
Target Start/End: Original strand, 18571086 - 18571341
Alignment:
Q  125 acacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaactcgtta 224  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||| |||  | |||  || ||    || || | |||  |||||||||||||||| |    
T  18571086 acacaattccctttggaaacacacaaatccgaagcagaaatagaaaaagaacctgccatgcctaag---aacaaaacaactgtatcccctaaactcgtca 18571182  T
Q  225 atttcacccacttcttctccttctcattaagcttaaacaaatcaatccttacaggaacattaagatcag-gatcattaagatcaatacaaagacaatcat 323  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||   |||||| || | |       || ||  | ||| ||||    
T  18571183 atttcacccacttcttctccttctcatcaagcttaaagaaatcaatccttacgggatcat---gatcagagaacct-------aacacccacacactcat 18571272  T
Q  324 aaacgtccgctaacaacaaatatccctcgctctccactaagaatttcatgttcccaccaccaaccaaag 392  Q
    ||||||| |||||||||| ||  |||||||||||||| ||||||||||||||||||||| |||||||||    
T  18571273 aaacgtcagctaacaacagatcgccctcgctctccaccaagaatttcatgttcccaccaacaaccaaag 18571341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 280
Target Start/End: Original strand, 33541693 - 33541779
Alignment:
Q  194 aagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaatccttacagga 280  Q
    |||||||||||  |||| ||||||||| |||| |||||||||| | ||||||||||||||||||||||||||| |||||||||||||    
T  33541693 aagaacaaaacaatatctcctaaactctttaacttcacccactccgtctccttctcattaagcttaaacaaatgaatccttacagga 33541779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 392
Target Start/End: Original strand, 33541806 - 33541882
Alignment:
Q  316 acaatcataaacgtccgctaacaacaaatatccctcgctctccactaagaatttcatgttcccaccaccaaccaaag 392  Q
    |||||||||||| ||| ||||||||||||  |||| |||||||||||||||||| | ||  ||||||||||||||||    
T  33541806 acaatcataaacatccactaacaacaaatcacccttgctctccactaagaatttgacgtctccaccaccaaccaaag 33541882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 9494953 - 9494821
Alignment:
Q  118 aaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaa 217  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||      ||   ||||||||||||||||||||||||||||    
T  9494953 aaagatgacacaattccctttggaaacgcacaaatcagaagcagaagcagaaaacgaacat------ccattccccaagaacaaaaccctatcccctaaa 9494860  T
Q  218 ctcgttaatttcacccacttcttctccttctcattaagc 256  Q
    ||| | || ||||||||  || |||||||||||| ||||    
T  9494859 ctcatcaaattcacccatctcatctccttctcatcaagc 9494821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 9343882 - 9343967
Alignment:
Q  190 ccccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaatcctta 275  Q
    ||||||||||||||| |||||||||||| | ||||| |||||||||||||||||| |||||| ||||||||||| ||||| |||||    
T  9343882 ccccaagaacaaaacactatcccctaaagttgttaacttcacccacttcttctccatctcatcaagcttaaacacatcaaccctta 9343967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 9448351 - 9448436
Alignment:
Q  190 ccccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaatcctta 275  Q
    ||||||||||||||| |||||||||||| | ||||| |||||||| |||||||||||||||| ||||||||||| ||||| |||||    
T  9448351 ccccaagaacaaaacactatcccctaaagttgttaacttcacccatttcttctccttctcataaagcttaaacacatcaaccctta 9448436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 9617608 - 9617555
Alignment:
Q  118 aaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9617608 aaagatgacacaattccctttggaaacacacaaatctgaagcagaagcagaaaa 9617555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 109 - 251
Target Start/End: Original strand, 41985590 - 41985726
Alignment:
Q  109 atcatcatcaaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaacccta 208  Q
    |||||||  ||||||||||||||| ||||||  |||| ||||||| ||||||||| ||||||||||| ||      ||   ||||||||||||||| |||    
T  41985590 atcatcactaaagatgacacaatttcctttgacaacagacaaatccgaagcagaagcagaaaacgaacat------ccattccccaagaacaaaactcta 41985683  T
Q  209 tcccctaaactcgttaatttcacccacttcttctccttctcat 251  Q
    |||||||||||||  || || ||||| ||||||||||||||||    
T  41985684 tcccctaaactcgccaacttgacccatttcttctccttctcat 41985726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 283
Target Start/End: Original strand, 9329809 - 9329966
Alignment:
Q  120 agatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaact 219  Q
    |||||||||||||||| |||| || || ||| || ||||||||| ||||||||||||||      ||   |||||||||||||||| |||| |||||| |    
T  9329809 agatgacacaattcccattggcaaaacccaactcggaagcagaagcagaaaacgaatat------ccattccccaagaacaaaaccttatctcctaaatt 9329902  T
Q  220 cgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaatccttacaggaaca 283  Q
    ||  || || |||||| | ||||| ||||||| |||| |||||| |||||||| ||||||||||    
T  9329903 cgccaacttgacccaccttttctctttctcatcaagcctaaacacatcaatccatacaggaaca 9329966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 283
Target Start/End: Original strand, 9336513 - 9336670
Alignment:
Q  120 agatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaact 219  Q
    |||||||||||||||| |||| || || ||| || ||||||||| ||||||||||| ||      ||   |||||||||||||||| |||| |||||| |    
T  9336513 agatgacacaattcccattggcaaaacccaactcggaagcagaagcagaaaacgaacat------ccattccccaagaacaaaaccttatctcctaaatt 9336606  T
Q  220 cgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaatccttacaggaaca 283  Q
    ||| |  || |||||| | ||||| ||||||| |||| |||||| |||||||| ||||||||||    
T  9336607 cgtcagcttgacccaccttttctctttctcatcaagcctaaacacatcaatccatacaggaaca 9336670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 9655492 - 9655375
Alignment:
Q  128 caattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaactcgttaatt 227  Q
    |||||||||||||||||||||||||| ||||| ||  ||||||||||| ||      ||    ||||| ||||||||||||||||||||| || | || |    
T  9655492 caattccctttggaaacacacaaatccgaagctgatgcagaaaacgaacat------ccttcgcccaaaaacaaaaccctatcccctaaattcatcaact 9655399  T
Q  228 tcacccacttcttctccttctcat 251  Q
    ||||||| ||||||||||||||||    
T  9655398 tcacccatttcttctccttctcat 9655375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 9646499 - 9646382
Alignment:
Q  128 caattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaactcgttaatt 227  Q
    |||||||||||||||||||||||||| ||||| ||  ||||||||||| || ||  | ||||     | ||||||||||||||||||||| || | || |    
T  9646499 caattccctttggaaacacacaaatccgaagctgatgcagaaaacgaacat-ccttcgccaa-----aaaacaaaaccctatcccctaaattcatcaact 9646406  T
Q  228 tcacccacttcttctccttctcat 251  Q
    ||||||| ||||||||||||||||    
T  9646405 tcacccatttcttctccttctcat 9646382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 9695695 - 9695608
Alignment:
Q  190 ccccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaatccttaca 277  Q
    |||||| ||||||||||||||||||||| | || || || |||||||||||||||||||||| |||| | || | |||||| ||||||    
T  9695695 ccccaaaaacaaaaccctatcccctaaattggtcaacttgacccacttcttctccttctcatcaagcctgaatacatcaatacttaca 9695608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 277
Target Start/End: Original strand, 9395298 - 9395383
Alignment:
Q  192 ccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaatccttaca 277  Q
    ||||||||||||||  ||| |||||| | || || ||||||||||| |||| |||||||| |||| |||||| |||||||||||||    
T  9395298 ccaagaacaaaaccaaatctcctaaattagtcaacttcacccactttttctgcttctcatcaagcctaaacacatcaatccttaca 9395383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 9407328 - 9407447
Alignment:
Q  109 atcatcatcaaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaacccta 208  Q
    |||||||  ||||| ||||||||||||||||| |||||||||||| ||||| ||| ||||||| ||| || |||  | ||     |||||||||||||||    
T  9407328 atcatcaataaagaagacacaattccctttggcaacacacaaatccgaagctgaagcagaaaatgaacat-ccattcaca-----aagaacaaaacccta 9407421  T
Q  209 tcccctaaactcgttaatttcaccca 234  Q
    |||||||||||| | || ||||||||    
T  9407422 tcccctaaactcatcaacttcaccca 9407447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 9425544 - 9425597
Alignment:
Q  118 aaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaa 171  Q
    ||||||||||||||||||||||| |||||||||||| ||||| ||| |||||||    
T  9425544 aaagatgacacaattccctttggcaacacacaaatccgaagctgaagcagaaaa 9425597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 251
Target Start/End: Original strand, 9432858 - 9432994
Alignment:
Q  109 atcatcatcaaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaacccta 208  Q
    |||||||  |||||||| ||||||||||| ||||||||||||||| || || ||| ||||||| ||||||       | | ||| | |||||||||||||    
T  9432858 atcatcaataaagatgatacaattcccttcggaaacacacaaatccgaggctgaagcagaaaaggaatat------tcaagccctatgaacaaaacccta 9432951  T
Q  209 tcccctaaactcgttaatttcacccacttcttctccttctcat 251  Q
    || |||||| || | |  |||||||||||| ||||||||||||    
T  9432952 tctcctaaattcttgatcttcacccacttcctctccttctcat 9432994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 9613959 - 9613916
Alignment:
Q  227 ttcacccacttcttctccttctcattaagcttaaacaaatcaat 270  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||    
T  9613959 ttcacccacttcttctccttctcatcaagcttaaaaaaatcaat 9613916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 41980891 - 41980970
Alignment:
Q  190 ccccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaa 269  Q
    ||||||||||||||| ||||||||||||||||| || || ||||| |||||||| |||| |  |||| |||||| |||||    
T  41980891 ccccaagaacaaaactctatcccctaaactcgtcaacttgacccatttcttctctttcttagcaagcctaaacacatcaa 41980970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 9402336 - 9402410
Alignment:
Q  104 aagatatcatcatcaaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatat 178  Q
    ||||| ||||||  |||||||| |||||||||||| | ||||||||||||||| |||||  ||||||| ||||||    
T  9402336 aagatttcatcaataaagatgatacaattccctttaggaacacacaaatctgaggcagaggcagaaaaggaatat 9402410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 9420575 - 9420649
Alignment:
Q  104 aagatatcatcatcaaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatat 178  Q
    ||||| ||||||  |||||||| |||||||||||| | ||||||||||||||| |||||  ||||||| ||||||    
T  9420575 aagatttcatcaataaagatgatacaattccctttaggaacacacaaatctgaggcagaggcagaaaaggaatat 9420649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 9626552 - 9626498
Alignment:
Q  197 aacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcat 251  Q
    ||||||||||||||||||||| || | || |||||||| ||||||||||||||||    
T  9626552 aacaaaaccctatcccctaaattcatcaaattcacccatttcttctccttctcat 9626498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 9340718 - 9340769
Alignment:
Q  200 aaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcat 251  Q
    |||||||||||||| ||| || | || |||||||||||||||||||||||||    
T  9340718 aaaaccctatccccgaaattcctcaacttcacccacttcttctccttctcat 9340769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 392
Target Start/End: Original strand, 9343993 - 9344075
Alignment:
Q  310 acaaagacaatcataaacgtccgctaacaacaaatatccctcgctctccactaagaatttcatgttcccaccaccaaccaaag 392  Q
    ||||| ||| ||||||| |||| ||| |||||| | |||||| ||||| |||||||||||  ||| ||| |||||||||||||    
T  9343993 acaaaaacactcataaatgtccactagcaacaactctccctctctctcgactaagaattttttgtccccgccaccaaccaaag 9344075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 9348101 - 9348143
Alignment:
Q  228 tcacccacttcttctccttctcattaagcttaaacaaatcaat 270  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||    
T  9348101 tcacccacttcttctccttctcatcaagtttaaaaaaatcaat 9348143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 9614098 - 9614045
Alignment:
Q  118 aaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaa 171  Q
    |||||| |||||||| ||||||| || ||||| ||||||||||||| |||||||    
T  9614098 aaagataacacaatttcctttggtaagacacagatctgaagcagaagcagaaaa 9614045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 9626625 - 9626584
Alignment:
Q  118 aaagatgacacaattccctttggaaacacacaaatctgaagc 159  Q
    ||||||||  |||||||||||||||||||||||||| |||||    
T  9626625 aaagatgatgcaattccctttggaaacacacaaatccgaagc 9626584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 9352945 - 9353009
Alignment:
Q  197 aacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaa 261  Q
    |||||||||||| |||||||  |  | || |||||||||||||||||| |||||| |||||||||    
T  9352945 aacaaaaccctaccccctaattttttcaacttcacccacttcttctccatctcatcaagcttaaa 9353009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 9397747 - 9397791
Alignment:
Q  109 atcatcatcaaagatgacacaattccctttggaaacacacaaatc 153  Q
    |||||||  ||||| ||||||||||||||||| ||||||||||||    
T  9397747 atcatcaataaagacgacacaattccctttggcaacacacaaatc 9397791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 9416614 - 9416654
Alignment:
Q  194 aagaacaaaaccctatcccctaaactcgttaatttcaccca 234  Q
    |||||||| |||||||||||||||||||| || ||||||||    
T  9416614 aagaacaacaccctatcccctaaactcgtcaacttcaccca 9416654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 9441856 - 9441816
Alignment:
Q  194 aagaacaaaaccctatcccctaaactcgttaatttcaccca 234  Q
    ||||||||||||||||||||||||||| | || ||||||||    
T  9441856 aagaacaaaaccctatcccctaaactcatcaacttcaccca 9441816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 9486009 - 9485969
Alignment:
Q  229 cacccacttcttctccttctcattaagcttaaacaaatcaa 269  Q
    ||||||||||||||||||||||| |||| |||||| |||||    
T  9486009 cacccacttcttctccttctcatcaagcctaaacacatcaa 9485969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 263
Target Start/End: Original strand, 235195 - 235323
Alignment:
Q  129 aattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaactcgttaattt 228  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||| ||| ||||      |||||||| ||||| |||||||||||| | |  || ||    
T  235195 aattccctttgggaacacacaaatccgaagcagaagcagaaaacgaacatagcaac------cccaagaagaaaactctatcccctaaatttgccaactt 235288  T
Q  229 cacccacttcttctccttctcattaagcttaaaca 263  Q
    |||||||||||||||||| ||||||||||||||||    
T  235289 cacccacttcttctccttttcattaagcttaaaca 235323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 273
Target Start/End: Complemental strand, 8814521 - 8814358
Alignment:
Q  104 aagatatcatcatcaaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaa 203  Q
    |||||||||||   || ||| |||||||||||||||| ||||||||||||  |||||||| ||||||| ||| |   |||     ||||||| |||||||    
T  8814521 aagatatcatccataatgatcacacaattccctttgggaacacacaaatccaaagcagaagcagaaaatgaaca---caagg---accccaaaaacaaaa 8814428  T
Q  204 ccctatcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaatcct 273  Q
    | |||||||||||| |||  || |||||||||||||||||||| || |||||||||||||  ||||||||    
T  8814427 ctctatcccctaaattcgccaacttcacccacttcttctccttttcgttaagcttaaacatgtcaatcct 8814358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 4439822 - 4439888
Alignment:
Q  109 atcatcatcaaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaa 175  Q
    |||||||  ||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||    
T  4439822 atcatcaataaagatgacacaattccctttagaaacacacaaatccgaagcagaagcagaaaacgaa 4439888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 277
Target Start/End: Original strand, 246841 - 246991
Alignment:
Q  121 gatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaactc 220  Q
    |||||||||||||||||||  ||||||||||||  |||||||| ||||||| ||  | | ||||      ||||||||||||||  |||| |||||| |     
T  246841 gatgacacaattccctttgtgaacacacaaatccaaagcagaagcagaaaatgaccagaacaac------cccaagaacaaaactgtatctcctaaatta 246934  T
Q  221 gttaatttcacccacttcttctccttctcattaagcttaaacaaatcaatccttaca 277  Q
    |  || |||||||| ||||||||| |  |||||||||||||||| ||||||||||||    
T  246935 gccaacttcacccatttcttctcccttgcattaagcttaaacaagtcaatccttaca 246991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 263
Target Start/End: Complemental strand, 251532 - 251400
Alignment:
Q  125 acacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaactcgtta 224  Q
    |||||||||| |||   |||||||||||| || |||||||||||||| ||| ||| | |||||||      ||||||||| |||||||||| | |||  |    
T  251532 acacaattccgtttccgaacacacaaatccgatgcagaaacagaaaatgaacatagccaccccaa------gaacaaaactctatcccctatattcgcca 251439  T
Q  225 atttcacccacttcttctccttctcattaagcttaaaca 263  Q
    | || ||||||||||| ||||| ||||||||||||||||    
T  251438 actttacccacttcttttccttttcattaagcttaaaca 251400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 277
Target Start/End: Original strand, 231617 - 231705
Alignment:
Q  189 accccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaatccttaca 277  Q
    ||||||||||||||||  ||||||||||| | |  || |||||||||||| |||||||  |||| |||||||||| ||| |||||||||    
T  231617 accccaagaacaaaactatatcccctaaattagccaacttcacccacttcatctcctttgcattgagcttaaacacatctatccttaca 231705  T

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Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 263
Target Start/End: Original strand, 4428593 - 4428741
Alignment:
Q  109 atcatcatcaaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaacccta 208  Q
    |||||||  ||||||||||||||||||||| | |||| |||| || ||||||||  |||||||| || ||      ||   |||||| ||||||||||||    
T  4428593 atcatcaataaagatgacacaattccctttagtaacagacaactcagaagcagaggcagaaaacaaacat------ccattccccaaaaacaaaacccta 4428686  T
Q  209 tcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaaca 263  Q
    ||||| |||||||| ||||||||||| ||   | ||||||||| |||| ||||||    
T  4428687 tcccccaaactcgtcaatttcacccatttacgcgccttctcatcaagcctaaaca 4428741  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 247033 - 247091
Alignment:
Q  334 taacaacaaatatccctcgctctccactaagaatttcatgttcccaccaccaaccaaag 392  Q
    |||||||||||  |||| |||||||||||||||||| || |  ||||||||||||||||    
T  247033 taacaacaaatcacccttgctctccactaagaatttaatatctccaccaccaaccaaag 247091  T

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Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 369
Target Start/End: Original strand, 235374 - 235423
Alignment:
Q  320 tcataaacgtccgctaacaacaaatatccctcgctctccactaagaattt 369  Q
    |||||||| || |||||||||||||  || ||||||||||||||||||||    
T  235374 tcataaacatctgctaacaacaaatcaccgtcgctctccactaagaattt 235423  T

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Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 18991175 - 18991232
Alignment:
Q  118 aaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaa 175  Q
    ||||| ||||||||||||||||  |||| | ||||| ||||||||| |||||||||||    
T  18991175 aaagacgacacaattccctttgacaacagataaatcagaagcagaagcagaaaacgaa 18991232  T

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Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 20694446 - 20694314
Alignment:
Q  118 aaagatgacacaattccctttggaaacacacaaatctgaagcagaaacagaaaacgaatataccaaccccaaccccaagaacaaaaccctatcccctaaa 217  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| ||      ||   |||||| ||||||||||||||||| |||    
T  20694446 aaagatgacacaattccctttggcaacacacaaatccgaagcagaagcagaaaacgaacat------ccattccccaaaaacaaaaccctatcccccaaa 20694353  T
Q  218 ctcgttaatttcacccacttcttctccttctcattaagc 256  Q
    || || ||  ||||||| ||||||||||| |||| ||||    
T  20694352 cttgtcaaactcacccatttcttctccttttcatcaagc 20694314  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 44688864 - 44688785
Alignment:
Q  190 ccccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcattaagcttaaacaaatcaa 269  Q
    ||||||||||||||  |||| ||||||||||||||| || ||||| ||||| | ||||||||| ||| | |||| |||||    
T  44688864 ccccaagaacaaaattctattccctaaactcgttaactttacccatttcttatgcttctcattgagcgtgaacacatcaa 44688785  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 450150 - 450102
Alignment:
Q  230 acccacttcttctccttctcattaagcttaaacaaatcaatccttacag 278  Q
    |||||||| ||||||||||||| |||| |||||| |||||||| |||||    
T  450150 acccactttttctccttctcatcaagcctaaacacatcaatccatacag 450102  T

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