View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0885_low_23 (Length: 331)
Name: NF0885_low_23
Description: NF0885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0885_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 32 - 240
Target Start/End: Complemental strand, 1734758 - 1734550
Alignment:
| Q |
32 |
aaagagctctaggtatgaggatgatcgcaaagaaaggaagaactcaagggaagaggatgatcgcaaagtaagaaggaactcaagggaagatgatgatcac |
131 |
Q |
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| T |
1734758 |
aaagaactctaggtatgaggatgatcgcaaagaaaggaagaactcaagggaagaggatgatcgcaaagtaagaaggaactcaagggaagatgatgatcac |
1734659 |
T |
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| Q |
132 |
agagagagaaagagctcaagggatgaggatgttcgtggggaaagaaagtacagaggggacgatgattatcatggagagagaaagcgcagcagaagggatg |
231 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1734658 |
agagagagaaagagctcaagggatgaggatgttcgtggggaaagaaagtacagaggggacgatgattatcatggagagagaaagcgcagcagaagggatg |
1734559 |
T |
|
| Q |
232 |
atgatgatg |
240 |
Q |
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||||||||| |
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| T |
1734558 |
atgatgatg |
1734550 |
T |
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