View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0886_low_22 (Length: 319)
Name: NF0886_low_22
Description: NF0886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0886_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 27430676 - 27430907
Alignment:
| Q |
1 |
ttctcccatgtttgtgaaacttttctgaaaaataattacataattggataagttttctaattgtaccnnnnnnnctcaaaaccaagtaggactatgaaac |
100 |
Q |
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| T |
27430676 |
ttctcccatgtttgtgaaacttttctgaaaaataattacataattggataagttttctaattgtaccaaaaaaactcaaaaccaagtaggactatgaaac |
27430775 |
T |
|
| Q |
101 |
aatcaaataattttactgtgtcagccaaaaccataataactagaggaaacaacaaaataaataaaaatgagagggcataattacaacctagtcctttcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27430776 |
aatcaaataattttactgtgtcagccaaaaccataataactagaggaaacaacaaaataaataaaaatgagagggcataattacaacctagtcctttcat |
27430875 |
T |
|
| Q |
201 |
cacatgtagtggatatgatgacaatgatgatg |
232 |
Q |
| |
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|||||||||||||||||||||||||||||||| |
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| T |
27430876 |
cacatgtagtggatatgatgacaatgatgatg |
27430907 |
T |
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