View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0886_low_4 (Length: 538)

Name: NF0886_low_4
Description: NF0886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0886_low_4
NF0886_low_4
[»] scaffold0006 (2 HSPs)
scaffold0006 (87-370)||(123-406)
scaffold0006 (87-370)||(8279-8562)
[»] chr8 (33 HSPs)
chr8 (80-370)||(26298988-26299278)
chr8 (95-370)||(18867867-18868142)
chr8 (98-367)||(10686464-10686733)
chr8 (95-367)||(35743007-35743279)
chr8 (371-426)||(25147369-25147424)
chr8 (367-413)||(19881223-19881269)
chr8 (371-429)||(39835269-39835327)
chr8 (369-426)||(5339693-5339749)
chr8 (378-426)||(38546928-38546976)
chr8 (379-426)||(11361765-11361812)
chr8 (379-426)||(17450394-17450441)
chr8 (371-413)||(17158572-17158614)
chr8 (371-413)||(22342239-22342281)
chr8 (368-413)||(25483113-25483158)
chr8 (87-357)||(4814907-4815174)
chr8 (87-357)||(28892997-28893264)
chr8 (371-413)||(16199177-16199219)
chr8 (371-424)||(20045065-20045118)
chr8 (371-419)||(14408313-14408361)
chr8 (371-419)||(18676930-18676978)
chr8 (371-413)||(14102032-14102075)
chr8 (370-424)||(15071767-15071820)
chr8 (311-357)||(16754941-16754987)
chr8 (155-273)||(21039732-21039849)
chr8 (371-416)||(4091771-4091816)
chr8 (370-419)||(14825022-14825071)
chr8 (379-424)||(17150160-17150205)
chr8 (371-419)||(4484525-4484573)
chr8 (371-419)||(4541238-4541286)
chr8 (371-403)||(5852153-5852185)
chr8 (371-419)||(20536833-20536881)
chr8 (371-419)||(22003001-22003049)
chr8 (371-419)||(26220917-26220965)
[»] chr3 (47 HSPs)
chr3 (98-370)||(1308486-1308758)
chr3 (95-370)||(3325735-3326010)
chr3 (95-367)||(8514712-8514984)
chr3 (95-367)||(32477958-32478230)
chr3 (130-367)||(22170540-22170777)
chr3 (96-367)||(2674418-2674689)
chr3 (222-370)||(18144911-18145059)
chr3 (367-429)||(29171528-29171590)
chr3 (371-426)||(20629014-20629069)
chr3 (373-426)||(12118596-12118649)
chr3 (369-426)||(17681564-17681621)
chr3 (371-424)||(24514686-24514739)
chr3 (371-426)||(55318198-55318253)
chr3 (371-429)||(12568110-12568168)
chr3 (371-429)||(13544574-13544632)
chr3 (87-357)||(10899242-10899509)
chr3 (155-357)||(16459765-16459964)
chr3 (155-357)||(22623660-22623859)
chr3 (370-413)||(178151-178194)
chr3 (371-426)||(16854173-16854228)
chr3 (370-413)||(52465053-52465096)
chr3 (105-357)||(10610454-10610703)
chr3 (371-429)||(22792512-22792570)
chr3 (371-413)||(43549333-43549375)
chr3 (371-424)||(15978774-15978827)
chr3 (194-357)||(54190848-54191008)
chr3 (87-357)||(6305544-6305811)
chr3 (371-419)||(7780222-7780270)
chr3 (373-413)||(11202552-11202592)
chr3 (371-419)||(21619749-21619797)
chr3 (371-419)||(27166392-27166440)
chr3 (371-419)||(28847487-28847535)
chr3 (371-419)||(34160571-34160619)
chr3 (371-422)||(17464420-17464471)
chr3 (378-429)||(46824326-46824377)
chr3 (311-357)||(10096487-10096533)
chr3 (311-357)||(10203373-10203419)
chr3 (311-357)||(29911634-29911680)
chr3 (371-408)||(8500663-8500700)
chr3 (371-424)||(55477729-55477782)
chr3 (371-419)||(9117102-9117150)
chr3 (371-419)||(10246591-10246639)
chr3 (371-419)||(13150657-13150705)
chr3 (371-419)||(13153125-13153173)
chr3 (371-419)||(16453143-16453191)
chr3 (398-426)||(18366187-18366215)
chr3 (371-419)||(45605795-45605843)
[»] chr5 (43 HSPs)
chr5 (95-370)||(24557781-24558056)
chr5 (95-370)||(24598813-24599088)
chr5 (87-370)||(28835917-28836199)
chr5 (98-367)||(43594739-43595008)
chr5 (98-367)||(43627533-43627802)
chr5 (98-367)||(27447441-27447710)
chr5 (95-367)||(31399189-31399461)
chr5 (98-367)||(37558802-37559071)
chr5 (95-367)||(33788974-33789246)
chr5 (246-367)||(28805070-28805191)
chr5 (371-429)||(11580135-11580193)
chr5 (371-423)||(29331231-29331283)
chr5 (370-413)||(6767087-6767130)
chr5 (371-426)||(24474311-24474366)
chr5 (370-412)||(17012130-17012172)
chr5 (371-413)||(22241585-22241627)
chr5 (371-413)||(22242581-22242623)
chr5 (371-413)||(22243577-22243619)
chr5 (369-413)||(6555447-6555491)
chr5 (373-413)||(29449176-29449216)
chr5 (380-423)||(17515839-17515882)
chr5 (370-413)||(17876595-17876638)
chr5 (370-413)||(22471159-22471202)
chr5 (371-413)||(6554846-6554888)
chr5 (379-413)||(22240597-22240631)
chr5 (371-419)||(20910260-20910308)
chr5 (370-418)||(21573995-21574043)
chr5 (371-419)||(23065703-23065751)
chr5 (373-424)||(39246382-39246433)
chr5 (370-405)||(40727027-40727062)
chr5 (371-413)||(2153626-2153668)
chr5 (371-413)||(22413418-22413460)
chr5 (311-357)||(25447942-25447988)
chr5 (370-419)||(29352172-29352221)
chr5 (378-419)||(38620682-38620723)
chr5 (370-419)||(39364629-39364678)
chr5 (371-412)||(41860242-41860283)
chr5 (370-419)||(42244229-42244278)
chr5 (371-419)||(263638-263686)
chr5 (371-419)||(10731806-10731854)
chr5 (371-419)||(29347226-29347274)
chr5 (371-419)||(29349699-29349747)
chr5 (371-419)||(31144177-31144225)
[»] chr6 (51 HSPs)
chr6 (98-357)||(14739772-14740031)
chr6 (95-367)||(33333273-33333545)
chr6 (93-370)||(24433515-24433792)
chr6 (371-429)||(20184073-20184131)
chr6 (371-429)||(22151860-22151918)
chr6 (371-429)||(25618537-25618595)
chr6 (370-413)||(15173061-15173104)
chr6 (370-413)||(15900262-15900305)
chr6 (370-429)||(23993587-23993646)
chr6 (371-425)||(15876864-15876918)
chr6 (371-429)||(18318078-18318136)
chr6 (371-413)||(18697759-18697801)
chr6 (371-424)||(23540317-23540370)
chr6 (87-357)||(35203744-35204011)
chr6 (371-422)||(8056272-8056323)
chr6 (378-413)||(18707510-18707545)
chr6 (371-422)||(25689932-25689983)
chr6 (196-357)||(25944011-25944169)
chr6 (371-429)||(14978180-14978238)
chr6 (371-413)||(23664666-23664708)
chr6 (371-413)||(25596935-25596977)
chr6 (371-424)||(4971477-4971530)
chr6 (371-424)||(16198737-16198790)
chr6 (371-424)||(17882365-17882418)
chr6 (371-424)||(18179635-18179688)
chr6 (370-419)||(33865523-33865572)
chr6 (378-422)||(1539787-1539831)
chr6 (371-419)||(20104455-20104503)
chr6 (371-419)||(22783472-22783520)
chr6 (371-419)||(33863042-33863090)
chr6 (371-429)||(4642739-4642798)
chr6 (398-429)||(18258855-18258886)
chr6 (368-419)||(26923311-26923362)
chr6 (369-419)||(4290043-4290093)
chr6 (378-424)||(5114859-5114905)
chr6 (311-357)||(13881193-13881239)
chr6 (371-429)||(18179050-18179108)
chr6 (370-424)||(21738518-21738572)
chr6 (311-357)||(22348656-22348702)
chr6 (371-413)||(31735396-31735438)
chr6 (371-429)||(12712672-12712732)
chr6 (371-424)||(15738444-15738497)
chr6 (371-424)||(15741224-15741277)
chr6 (312-357)||(17692533-17692578)
chr6 (370-419)||(19174605-19174654)
chr6 (371-424)||(19857808-19857861)
chr6 (371-424)||(23531550-23531603)
chr6 (371-419)||(2290046-2290094)
chr6 (371-419)||(18333461-18333509)
chr6 (371-419)||(24423734-24423782)
chr6 (371-419)||(31184956-31185004)
[»] chr4 (41 HSPs)
chr4 (95-366)||(9226598-9226869)
chr4 (95-367)||(18858194-18858466)
chr4 (97-369)||(5145524-5145796)
chr4 (98-351)||(16626193-16626446)
chr4 (371-426)||(15488954-15489009)
chr4 (370-429)||(44927546-44927605)
chr4 (371-426)||(52871150-52871205)
chr4 (373-426)||(14826766-14826819)
chr4 (372-424)||(18214181-18214233)
chr4 (371-423)||(23802003-23802055)
chr4 (371-426)||(1604188-1604243)
chr4 (378-429)||(14035356-14035407)
chr4 (379-426)||(14745170-14745217)
chr4 (371-422)||(15480499-15480550)
chr4 (371-413)||(12841894-12841936)
chr4 (371-429)||(18259571-18259629)
chr4 (371-426)||(14827080-14827135)
chr4 (371-426)||(19858916-19858971)
chr4 (370-413)||(40620933-40620976)
chr4 (371-422)||(44432008-44432059)
chr4 (105-357)||(4567590-4567839)
chr4 (371-417)||(55990637-55990683)
chr4 (371-424)||(18238481-18238534)
chr4 (371-419)||(1836388-1836436)
chr4 (371-419)||(7640055-7640103)
chr4 (371-419)||(14717588-14717636)
chr4 (370-429)||(19243922-19243982)
chr4 (371-419)||(29268601-29268649)
chr4 (378-413)||(15991610-15991645)
chr4 (369-424)||(54797524-54797579)
chr4 (379-413)||(14186799-14186833)
chr4 (371-424)||(14281612-14281665)
chr4 (371-424)||(44616528-44616581)
chr4 (371-419)||(3840948-3840996)
chr4 (371-419)||(12032640-12032688)
chr4 (371-419)||(12747728-12747776)
chr4 (371-419)||(15117221-15117269)
chr4 (313-357)||(16634929-16634973)
chr4 (311-351)||(36770044-36770084)
chr4 (371-419)||(44771967-44772015)
chr4 (371-419)||(50221208-50221256)
[»] chr2 (44 HSPs)
chr2 (98-367)||(25393504-25393773)
chr2 (95-367)||(19346896-19347168)
chr2 (145-308)||(39485468-39485631)
chr2 (243-370)||(31058573-31058700)
chr2 (254-370)||(39485352-39485468)
chr2 (369-429)||(22172654-22172714)
chr2 (371-426)||(24672225-24672280)
chr2 (184-367)||(31133863-31134046)
chr2 (369-429)||(32213699-32213759)
chr2 (371-422)||(20320614-20320665)
chr2 (371-422)||(22611685-22611736)
chr2 (371-426)||(23705894-23705949)
chr2 (371-422)||(23932835-23932886)
chr2 (370-429)||(26393643-26393702)
chr2 (371-413)||(18357590-18357632)
chr2 (371-413)||(21246026-21246068)
chr2 (311-357)||(17934538-17934584)
chr2 (379-413)||(21916025-21916059)
chr2 (370-419)||(23134575-23134624)
chr2 (370-419)||(34401393-34401442)
chr2 (371-424)||(45026881-45026934)
chr2 (371-419)||(23132108-23132156)
chr2 (371-419)||(23136813-23136861)
chr2 (371-419)||(26506622-26506670)
chr2 (371-419)||(26509099-26509147)
chr2 (371-419)||(27919635-27919683)
chr2 (371-419)||(32038366-32038414)
chr2 (371-419)||(39683562-39683610)
chr2 (370-409)||(12626011-12626050)
chr2 (371-429)||(22106569-22106628)
chr2 (311-357)||(2738659-2738705)
chr2 (311-357)||(20052442-20052488)
chr2 (311-357)||(22714915-22714961)
chr2 (371-413)||(24528561-24528603)
chr2 (379-413)||(26904746-26904780)
chr2 (311-357)||(39684701-39684747)
chr2 (371-424)||(24941933-24941986)
chr2 (371-419)||(18810189-18810237)
chr2 (371-419)||(23710882-23710930)
chr2 (371-419)||(24897070-24897118)
chr2 (371-419)||(24899553-24899601)
chr2 (371-419)||(24902030-24902078)
chr2 (371-419)||(24904507-24904555)
chr2 (371-419)||(24906982-24907030)
[»] chr7 (53 HSPs)
chr7 (98-370)||(18411272-18411544)
chr7 (98-367)||(24263523-24263792)
chr7 (98-370)||(9187345-9187617)
chr7 (95-367)||(16882545-16882817)
chr7 (97-367)||(21986538-21986808)
chr7 (179-357)||(24272181-24272359)
chr7 (223-370)||(21642302-21642449)
chr7 (98-228)||(21643794-21643924)
chr7 (371-426)||(17235950-17236005)
chr7 (367-413)||(15080876-15080922)
chr7 (378-426)||(45846284-45846332)
chr7 (371-426)||(8471952-8472007)
chr7 (371-426)||(8941684-8941739)
chr7 (371-413)||(16549614-16549656)
chr7 (371-413)||(16616006-16616048)
chr7 (371-429)||(24275819-24275877)
chr7 (370-422)||(15375581-15375633)
chr7 (371-426)||(8469890-8469945)
chr7 (371-426)||(12462931-12462986)
chr7 (370-413)||(13898816-13898859)
chr7 (379-426)||(14268592-14268639)
chr7 (379-413)||(9388316-9388350)
chr7 (371-413)||(13648617-13648659)
chr7 (371-413)||(15214898-15214940)
chr7 (371-413)||(29051790-29051832)
chr7 (371-424)||(9944683-9944736)
chr7 (370-419)||(13870592-13870641)
chr7 (371-424)||(14317172-14317225)
chr7 (370-419)||(14947987-14948036)
chr7 (371-424)||(18431941-18431994)
chr7 (371-419)||(457569-457617)
chr7 (87-357)||(3322469-3322736)
chr7 (371-419)||(16233769-16233817)
chr7 (371-419)||(16411306-16411354)
chr7 (371-419)||(20383992-20384040)
chr7 (371-419)||(26354848-26354896)
chr7 (371-419)||(26357300-26357348)
chr7 (371-429)||(5294104-5294163)
chr7 (371-429)||(5295277-5295336)
chr7 (371-429)||(5296450-5296509)
chr7 (370-405)||(19485641-19485676)
chr7 (311-357)||(44012212-44012258)
chr7 (371-413)||(48744874-48744916)
chr7 (371-424)||(3387805-3387858)
chr7 (370-419)||(11392170-11392219)
chr7 (370-419)||(32126702-32126751)
chr7 (379-412)||(37726541-37726574)
chr7 (371-408)||(41524168-41524205)
chr7 (371-408)||(41526630-41526667)
chr7 (370-426)||(10500275-10500331)
chr7 (370-426)||(10505304-10505360)
chr7 (371-411)||(18628787-18628827)
chr7 (371-419)||(27218107-27218155)
[»] scaffold0197 (1 HSPs)
scaffold0197 (98-367)||(16509-16778)
[»] chr1 (41 HSPs)
chr1 (98-367)||(41395869-41396126)
chr1 (214-370)||(19369001-19369157)
chr1 (371-426)||(43543923-43543978)
chr1 (371-426)||(20943762-20943817)
chr1 (371-426)||(34771021-34771076)
chr1 (371-426)||(37524952-37525007)
chr1 (371-429)||(13880175-13880233)
chr1 (371-412)||(23089513-23089554)
chr1 (87-357)||(9523961-9524228)
chr1 (370-426)||(21506582-21506638)
chr1 (370-422)||(42314334-42314386)
chr1 (371-411)||(50001876-50001916)
chr1 (368-419)||(29777872-29777923)
chr1 (370-413)||(45573693-45573736)
chr1 (371-413)||(434209-434251)
chr1 (371-413)||(21660707-21660749)
chr1 (371-424)||(16274228-16274281)
chr1 (370-419)||(21473952-21474001)
chr1 (368-413)||(46194028-46194073)
chr1 (155-357)||(2396936-2397135)
chr1 (371-419)||(9044172-9044220)
chr1 (371-419)||(12945619-12945667)
chr1 (371-419)||(16363165-16363213)
chr1 (371-415)||(21737625-21737669)
chr1 (371-419)||(21842017-21842065)
chr1 (371-422)||(16402269-16402320)
chr1 (371-430)||(46560522-46560580)
chr1 (370-413)||(48522119-48522162)
chr1 (371-430)||(51084412-51084470)
chr1 (369-419)||(13211847-13211897)
chr1 (371-413)||(29763243-29763285)
chr1 (371-429)||(49262340-49262398)
chr1 (371-424)||(1573585-1573638)
chr1 (378-419)||(10827934-10827975)
chr1 (371-424)||(12759226-12759279)
chr1 (371-424)||(13990106-13990159)
chr1 (370-403)||(48444762-48444795)
chr1 (371-430)||(14235668-14235725)
chr1 (371-419)||(21922158-21922206)
chr1 (370-426)||(29299486-29299542)
chr1 (371-419)||(50799598-50799646)
[»] scaffold0078 (1 HSPs)
scaffold0078 (146-290)||(34705-34849)
[»] scaffold0839 (1 HSPs)
scaffold0839 (370-426)||(776-832)
[»] scaffold1272 (1 HSPs)
scaffold1272 (371-426)||(1425-1480)
[»] scaffold0711 (1 HSPs)
scaffold0711 (371-426)||(6413-6468)
[»] scaffold0059 (2 HSPs)
scaffold0059 (371-426)||(30134-30189)
scaffold0059 (371-426)||(60909-60964)
[»] scaffold0035 (2 HSPs)
scaffold0035 (371-426)||(107779-107834)
scaffold0035 (371-426)||(116280-116335)
[»] scaffold0002 (1 HSPs)
scaffold0002 (371-426)||(387286-387341)
[»] scaffold0231 (1 HSPs)
scaffold0231 (371-429)||(24237-24295)
[»] scaffold0047 (2 HSPs)
scaffold0047 (373-426)||(23576-23629)
scaffold0047 (371-426)||(23890-23945)
[»] scaffold0040 (1 HSPs)
scaffold0040 (373-426)||(21063-21116)
[»] scaffold0005 (2 HSPs)
scaffold0005 (373-426)||(12890-12943)
scaffold0005 (371-426)||(12574-12629)
[»] scaffold0452 (1 HSPs)
scaffold0452 (370-426)||(216-272)
[»] scaffold0116 (2 HSPs)
scaffold0116 (379-426)||(46128-46175)
scaffold0116 (371-413)||(45649-45691)
[»] scaffold0003 (3 HSPs)
scaffold0003 (371-426)||(153015-153070)
scaffold0003 (371-423)||(159751-159803)
scaffold0003 (371-419)||(18-66)
[»] scaffold0632 (2 HSPs)
scaffold0632 (371-413)||(1568-1610)
scaffold0632 (371-424)||(210-263)
[»] scaffold0507 (2 HSPs)
scaffold0507 (371-413)||(1819-1861)
scaffold0507 (369-413)||(6709-6753)
[»] scaffold0394 (1 HSPs)
scaffold0394 (371-413)||(13381-13423)
[»] scaffold0230 (2 HSPs)
scaffold0230 (371-429)||(22333-22391)
scaffold0230 (370-419)||(15193-15242)
[»] scaffold0156 (1 HSPs)
scaffold0156 (371-413)||(17011-17053)
[»] scaffold0107 (1 HSPs)
scaffold0107 (370-428)||(11183-11241)
[»] scaffold0104 (2 HSPs)
scaffold0104 (371-413)||(15297-15339)
scaffold0104 (371-413)||(17317-17359)
[»] scaffold0083 (2 HSPs)
scaffold0083 (371-413)||(2337-2379)
scaffold0083 (368-413)||(42628-42673)
[»] scaffold0057 (1 HSPs)
scaffold0057 (371-413)||(69282-69324)
[»] scaffold0034 (1 HSPs)
scaffold0034 (371-413)||(28825-28867)
[»] scaffold0043 (1 HSPs)
scaffold0043 (379-424)||(11316-11361)
[»] scaffold0747 (1 HSPs)
scaffold0747 (378-426)||(1913-1961)
[»] scaffold0515 (2 HSPs)
scaffold0515 (373-429)||(5931-5987)
scaffold0515 (379-413)||(5585-5619)
[»] scaffold0317 (1 HSPs)
scaffold0317 (371-423)||(5928-5980)
[»] scaffold0306 (3 HSPs)
scaffold0306 (373-429)||(5941-5997)
scaffold0306 (371-423)||(10331-10383)
scaffold0306 (379-413)||(5595-5629)
[»] scaffold0970 (1 HSPs)
scaffold0970 (371-422)||(1152-1203)
[»] scaffold0609 (1 HSPs)
scaffold0609 (370-413)||(9530-9573)
[»] scaffold0513 (1 HSPs)
scaffold0513 (371-418)||(9299-9346)
[»] scaffold0112 (2 HSPs)
scaffold0112 (371-426)||(19646-19701)
scaffold0112 (371-426)||(28325-28380)
[»] scaffold1439 (1 HSPs)
scaffold1439 (371-429)||(1395-1453)
[»] scaffold0716 (1 HSPs)
scaffold0716 (371-413)||(6051-6093)
[»] scaffold0607 (1 HSPs)
scaffold0607 (371-413)||(4236-4278)
[»] scaffold0577 (1 HSPs)
scaffold0577 (371-421)||(5084-5134)
[»] scaffold0290 (1 HSPs)
scaffold0290 (371-413)||(1401-1443)
[»] scaffold0151 (2 HSPs)
scaffold0151 (371-413)||(902-944)
scaffold0151 (371-413)||(10497-10539)
[»] scaffold0122 (1 HSPs)
scaffold0122 (369-419)||(33489-33539)
[»] scaffold0042 (1 HSPs)
scaffold0042 (371-413)||(52549-52591)
[»] scaffold0461 (1 HSPs)
scaffold0461 (371-424)||(12894-12947)
[»] scaffold0319 (1 HSPs)
scaffold0319 (371-424)||(6819-6872)
[»] scaffold0436 (2 HSPs)
scaffold0436 (371-407)||(9367-9403)
scaffold0436 (371-407)||(13502-13538)
[»] scaffold0363 (1 HSPs)
scaffold0363 (371-419)||(10492-10540)
[»] scaffold0254 (2 HSPs)
scaffold0254 (370-429)||(21970-22030)
scaffold0254 (371-408)||(19521-19558)
[»] scaffold0209 (1 HSPs)
scaffold0209 (87-357)||(825-1092)
[»] scaffold0174 (1 HSPs)
scaffold0174 (370-422)||(29235-29287)
[»] scaffold0150 (1 HSPs)
scaffold0150 (370-430)||(31130-31189)
[»] scaffold0601 (1 HSPs)
scaffold0601 (371-426)||(9749-9803)
[»] scaffold0546 (1 HSPs)
scaffold0546 (371-422)||(8453-8504)
[»] scaffold0109 (1 HSPs)
scaffold0109 (371-422)||(4803-4854)
[»] scaffold1139 (1 HSPs)
scaffold1139 (369-419)||(2504-2554)
[»] scaffold1137 (1 HSPs)
scaffold1137 (371-429)||(1232-1290)
[»] scaffold0695 (1 HSPs)
scaffold0695 (370-424)||(7186-7240)
[»] scaffold0538 (1 HSPs)
scaffold0538 (370-424)||(8100-8154)
[»] scaffold0338 (1 HSPs)
scaffold0338 (371-413)||(2526-2568)
[»] scaffold0256 (1 HSPs)
scaffold0256 (311-357)||(18780-18826)
[»] scaffold0063 (2 HSPs)
scaffold0063 (369-403)||(40692-40726)
scaffold0063 (371-419)||(38602-38650)
[»] scaffold0028 (5 HSPs)
scaffold0028 (370-424)||(137919-137973)
scaffold0028 (370-424)||(142857-142911)
scaffold0028 (371-424)||(135450-135503)
scaffold0028 (371-424)||(140388-140441)
scaffold0028 (371-424)||(145326-145379)
[»] scaffold1311 (1 HSPs)
scaffold1311 (370-419)||(170-219)
[»] scaffold0247 (1 HSPs)
scaffold0247 (371-424)||(16901-16954)
[»] scaffold0191 (1 HSPs)
scaffold0191 (371-412)||(3946-3987)
[»] scaffold0142 (1 HSPs)
scaffold0142 (371-412)||(17978-18019)
[»] scaffold0074 (1 HSPs)
scaffold0074 (371-424)||(37819-37872)
[»] scaffold0037 (1 HSPs)
scaffold0037 (371-412)||(83337-83378)
[»] scaffold0031 (1 HSPs)
scaffold0031 (371-424)||(55878-55931)
[»] scaffold0022 (1 HSPs)
scaffold0022 (370-419)||(117798-117847)
[»] scaffold0021 (1 HSPs)
scaffold0021 (371-424)||(1061-1114)
[»] scaffold0521 (1 HSPs)
scaffold0521 (371-419)||(8546-8594)
[»] scaffold0486 (1 HSPs)
scaffold0486 (371-419)||(2883-2931)
[»] scaffold0481 (1 HSPs)
scaffold0481 (371-419)||(366-414)
[»] scaffold0454 (1 HSPs)
scaffold0454 (371-419)||(828-876)
[»] scaffold0435 (1 HSPs)
scaffold0435 (379-419)||(4116-4156)
[»] scaffold0395 (1 HSPs)
scaffold0395 (371-419)||(2105-2153)
[»] scaffold0309 (1 HSPs)
scaffold0309 (371-419)||(18-66)
[»] scaffold0297 (1 HSPs)
scaffold0297 (371-419)||(2573-2621)
[»] scaffold0134 (1 HSPs)
scaffold0134 (379-419)||(39067-39107)
[»] scaffold0079 (1 HSPs)
scaffold0079 (371-419)||(13369-13417)
[»] scaffold0053 (1 HSPs)
scaffold0053 (371-419)||(71-119)
[»] scaffold0044 (1 HSPs)
scaffold0044 (371-419)||(41644-41692)
[»] scaffold0023 (1 HSPs)
scaffold0023 (371-419)||(95656-95704)


Alignment Details
Target: scaffold0006 (Bit Score: 232; Significance: 1e-128; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 87 - 370
Target Start/End: Complemental strand, 406 - 123
Alignment:
Q  87 catcatcaggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgca 186  Q
    ||||| ||||||||||||||||||||| ||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  406 catcaacaggaatagacttcaagacacctatggaagtatggagtgggaaagcggcagattactcatctttgaaggttttcggagctttggcatatgcgca 307  T
Q  187 tatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  306 tatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggttacaagttgtggaaattggaatctagt 207  T
Q  287 ggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  206 ggaggatcaaaagtcttgattagtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagacttta 123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 87 - 370
Target Start/End: Complemental strand, 8562 - 8279
Alignment:
Q  87 catcatcaggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgca 186  Q
    ||||| ||||||||||||||||||||| ||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  8562 catcaacaggaatagacttcaagacacctatggaagtatggagtgggaaagcggcagattactcatctttgaaggttttcggagctttggcatatgcgca 8463  T
Q  187 tatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  8462 tatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggttacaagttgtggaaattggaatctagt 8363  T
Q  287 ggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||    
T  8362 ggaggatcaaaagtcttaattagtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagaaacttta 8279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 80 - 370
Target Start/End: Complemental strand, 26299278 - 26298988
Alignment:
Q  80 agatggacatcatcaggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaat 179  Q
    |||||| ||||| | || |||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| ||    
T  26299278 agatggccatcaacggggatagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcttctttgaaggttttcggagctttggcat 26299179  T
Q  180 atgcgcatatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattaga 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||    
T  26299178 atgcgcatatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattgga 26299079  T
Q  280 atctagtggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  26299078 atctagtggaggatcaaaagtcttgattagtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagacttta 26298988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 95 - 370
Target Start/End: Original strand, 18867867 - 18868142
Alignment:
Q  95 ggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagc 194  Q
    ||||||||||||||||||| |||||| |||| || ||||||||||||||||||||| |||||||| |||||| ||||||||| |||||||||||||||||    
T  18867867 ggaatagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcctctttgaatgttttcggagctttggcatatgcgcatatcaagc 18867966  T
Q  195 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||     
T  18867967 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatc 18868066  T
Q  295 aaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  18868067 aagagtcttgattagtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagacttta 18868142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 98 - 367
Target Start/End: Original strand, 10686464 - 10686733
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  10686464 atagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagcaag 10686563  T
Q  198 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||     
T  10686564 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatcaag 10686663  T
Q  298 agtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    ||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||    
T  10686664 agtcttgataagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagact 10686733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 95 - 367
Target Start/End: Complemental strand, 35743279 - 35743007
Alignment:
Q  95 ggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagc 194  Q
    ||||||||||||||||||| |||||| |||| || |||||||||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  35743279 ggaatagacttcaagacacctatggaggtatggagtgggaaaccggcggattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagc 35743180  T
Q  195 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| |||||||||||| |||     
T  35743179 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggatataagttgtggaaattggaatctagtggaagatc 35743080  T
Q  295 aaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    || ||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||    
T  35743079 aagagtcttgataagtagggatgttacctttgatgagacccgaatggggatgaagtgtaaagacctagagact 35743007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 25147424 - 25147369
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  25147424 tgtaacaccctctttgaattatttgttttatttgattattttattgagtttagagt 25147369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 413
Target Start/End: Complemental strand, 19881269 - 19881223
Alignment:
Q  367 tttatgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  19881269 tttatgtaacgccctctttgaattatttgatttatttgattgtttta 19881223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 39835327 - 39835269
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| |||||||||||||||||||||||||||||||||||| | |||||||| ||||    
T  39835327 tgtaacgccctctttgaattatttgatttatttgattgttttaataagtttagaatata 39835269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 5339693 - 5339749
Alignment:
Q  369 tatgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  5339693 tatgtaacgccctctttgaattatttg-tttatttgattattttattgagtttagagt 5339749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 38546928 - 38546976
Alignment:
Q  378 ccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  38546928 ccctctttgaattatttgttttatttgattattttattgagtttagagt 38546976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 426
Target Start/End: Complemental strand, 11361812 - 11361765
Alignment:
Q  379 cctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11361812 cctctttgaattatttgttttatttgattattttattgagtttagagt 11361765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 426
Target Start/End: Original strand, 17450394 - 17450441
Alignment:
Q  379 cctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  17450394 cctctttgaattatttgttttatttgattattttattgagtttagagt 17450441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 17158572 - 17158614
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  17158572 tgtaacaccctctttgaattatttgatttatttgattgtttta 17158614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 22342281 - 22342239
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  22342281 tgtaacgccctctttgaattatttgatttatttgattgtttta 22342239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 413
Target Start/End: Original strand, 25483113 - 25483158
Alignment:
Q  368 ttatgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  25483113 ttatgtaacgccctcttggaattatttgatttatttgattgtttta 25483158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 357
Target Start/End: Complemental strand, 4815174 - 4814907
Alignment:
Q  87 catcatcaggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgca 186  Q
    ||||| |||| |||||  ||||||||| |||||| || | || ||||| ||||||||| |||||    ||||| || |||||||||||    | ||| ||    
T  4815174 catcaacagggatagatctcaagacacctatggaggtttggagtgggagaccggcagactactctaacttgaaagtcttcagagctttaacgtttgccca 4815075  T
Q  187 tatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagt 286  Q
    | ||| ||||||||| |||||  |||||||| |||| ||| | ||||| |||||||| |||||| |||| ||||| |   |||||||  | ||| ||       
T  4815074 tgtcaggcaagacaaacttgatgctagagctgtgaagtgtattttcatgggttatcctgaaggtgtgaaaggttatagactgtggaagatggaacct--- 4814978  T
Q  287 ggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||| |||| |  | || || ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  4814977 ggaggatcaaaatttatcataagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 4814907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 357
Target Start/End: Original strand, 28892997 - 28893264
Alignment:
Q  87 catcatcaggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgca 186  Q
    ||||| |||| |||||  ||||||||| |||||| || | || ||||| ||||| ||| |||||    ||||| |||||| ||||||| |  | ||| ||    
T  28892997 catcaacagggatagatctcaagacacctatggaggtttggagtgggagaccggtagactactctaacttgaaagttttcggagctttagcgtttgccca 28893096  T
Q  187 tatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagt 286  Q
    | ||| ||||||||| |||||  |||||||| |||| ||| | ||||| |||||||| |||||| |||| |||||||   |||||||  | ||| ||       
T  28893097 tgtcaggcaagacaaacttgatgctagagctgtgaagtgtattttcatgggttatcctgaaggtgtgaaaggttacagactgtggaagatggaacct--- 28893193  T
Q  287 ggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    |||| || |||| |  | || || ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  28893194 ggagaatcaaaatttatcataagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 28893264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 16199219 - 16199177
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| |||||||||||||||| |||||||||||||||||||    
T  16199219 tgtaacgccctctttgaattattagatttatttgattgtttta 16199177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 20045065 - 20045118
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  20045065 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 20045118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 14408313 - 14408361
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  14408313 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 14408361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 18676930 - 18676978
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  18676930 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 18676978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 14102032 - 14102075
Alignment:
Q  371 tgtaaccccctctttgaattatttga-tttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||| |||||||||||||||||    
T  14102032 tgtaacgccctctttgaattatttgattttatttgattgtttta 14102075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 424
Target Start/End: Complemental strand, 15071820 - 15071767
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    ||||||| ||||||||||||||||| | |||||||||| ||||| ||||||||||    
T  15071820 atgtaacgccctctttgaattattt-aattatttgattattttaatgagtttaga 15071767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 16754987 - 16754941
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  16754987 agggatgttacttttgatgagacccgaatggggatgaagtgcaaaga 16754941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 273
Target Start/End: Original strand, 21039732 - 21039849
Alignment:
Q  155 ttgaaggttttcagagctttggaatatgcgcatatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatga 254  Q
    ||||| |||||||||||||| | || ||| ||| |||  |||||||| |||||  |||||||| |||| ||| | ||||| |||||||| |||||| |||    
T  21039732 ttgaatgttttcagagctttagcatttgctcatgtcagacaagacaa-cttgatgctagagctgtgaagtgtattttcatgggttatcctgaaggtgtga 21039830  T
Q  255 agggttacaagttgtggaa 273  Q
    | ||||||||  |||||||    
T  21039831 aaggttacaaactgtggaa 21039849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 4091816 - 4091771
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattg 416  Q
    |||||| |||||||||||||||||||||||||| ||| ||| ||||    
T  4091816 tgtaacgccctctttgaattatttgatttatttaattatttaattg 4091771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 14825071 - 14825022
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  14825071 atgtaacgccctctttgaattattagatttatttaattatttaattgagt 14825022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 424
Target Start/End: Original strand, 17150160 - 17150205
Alignment:
Q  379 cctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    ||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  17150160 cctctttgaattatttgttttatttaattgtttaattgagtctaga 17150205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 4484573 - 4484525
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  4484573 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 4484525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 4541238 - 4541286
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||| ||||||||||||||||| ||| ||| |||||||    
T  4541238 tgtaacgccctctttaaattatttgatttatttaattatttaattgagt 4541286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 403
Target Start/End: Original strand, 5852153 - 5852185
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttattt 403  Q
    |||||| ||||||||||||||||||||||||||    
T  5852153 tgtaacgccctctttgaattatttgatttattt 5852185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 20536833 - 20536881
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  20536833 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 20536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 22003049 - 22003001
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  22003049 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 22003001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 26220965 - 26220917
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| |||||||    
T  26220965 tgtaacgccctctttgaattatttgttttatttaattatttaattgagt 26220917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 98 - 370
Target Start/End: Complemental strand, 1308758 - 1308486
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  1308758 atagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcttctttgaaggttttcggagctttggcatatgcgcatatcaagcaag 1308659  T
Q  198 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| |||    
T  1308658 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatcaaa 1308559  T
Q  298 agtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  1308558 agtcttgattagtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagacttta 1308486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 95 - 370
Target Start/End: Original strand, 3325735 - 3326010
Alignment:
Q  95 ggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagc 194  Q
    ||||||||||||||||||| ||||||||||| || ||||||||  | ||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  3325735 ggaatagacttcaagacacctatggaagtatggagtgggaaactagaagattactcatctttgaaggttttcggagctttggcatatgcgcatatcaagc 3325834  T
Q  195 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatg 294  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||     
T  3325835 aagacatgcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggttacaagttgtgaaaattggaatctagtggaggatc 3325934  T
Q  295 aaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  3325935 aaaagtcttgattagtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagacttta 3326010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 95 - 367
Target Start/End: Complemental strand, 8514984 - 8514712
Alignment:
Q  95 ggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagc 194  Q
    ||||||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  8514984 ggaatagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagc 8514885  T
Q  195 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| |||     
T  8514884 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggatacaagttgtggaaattggaatctagtggaagatc 8514785  T
Q  295 aaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    || ||||||||| ||||||||||||||||| |||||||| || |||||||||||||||||||| |||||||||    
T  8514784 aagagtcttgataagtagggatgttaccttcgatgagacccggatggggatgaagtgtaaagacttagagact 8514712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 95 - 367
Target Start/End: Complemental strand, 32478230 - 32477958
Alignment:
Q  95 ggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagc 194  Q
    ||||||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  32478230 ggaatagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagc 32478131  T
Q  195 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| |||     
T  32478130 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggatacaagttgtggaaattggaatctagtggaagatc 32478031  T
Q  295 aaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    || ||||||||| ||||||||||||||||| |||||||| || |||||||||||||||||||| |||||||||    
T  32478030 aagagtcttgataagtagggatgttaccttcgatgagacccggatggggatgaagtgtaaagacttagagact 32477958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 130 - 367
Target Start/End: Original strand, 22170540 - 22170777
Alignment:
Q  130 tgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaagacaagcttgagcctagagctttgaaatgtgtc 229  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22170540 tgggaaaccggcagattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagcaagacaagcttgagcctagagctttgaaatgtgtc 22170639  T
Q  230 ttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaaagtcttgattagtagggatgttacctttgatg 329  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| || ||||||||| ||||||||||||||||||||||    
T  22170640 ttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatcaagagtcttgataagtagggatgttacctttgatg 22170739  T
Q  330 agactcgtatggggatgaagtgtaaagatttagagact 367  Q
    |||| |||||||||||||||||||||||  ||||||||    
T  22170740 agacccgtatggggatgaagtgtaaagacctagagact 22170777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 96 - 367
Target Start/End: Original strand, 2674418 - 2674689
Alignment:
Q  96 gaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagca 195  Q
    ||||| ||||| |||||| |||||| |||| || |||||||||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  2674418 gaataaacttctagacacctatggaggtatggagtgggaaaccggcggattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagca 2674517  T
Q  196 agacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatga 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||| |||||||||||| ||| |    
T  2674518 agacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggataagagttgtggaaattggaatctagtggaagatca 2674617  T
Q  296 aaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    | ||||||||| ||||||||||||||||| |||||||| || |||||||||||||||||||| |||||||||    
T  2674618 agagtcttgataagtagggatgttaccttcgatgagacccgaatggggatgaagtgtaaagacttagagact 2674689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 222 - 370
Target Start/End: Complemental strand, 18145059 - 18144911
Alignment:
Q  222 aatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaaagtcttgattagtagggatgttac 321  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||| ||| |||||||| |||||||| |||||    
T  18145059 aatgtgtcttcattggttatccggaaggtgtgaagggttacaagttgtggaaattggaatctggtggaggatcaaatgtcttgataagtagggacgttac 18144960  T
Q  322 ctttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    ||||||||| || |||||| | ||||||||||||||| |||||||||||    
T  18144959 ctttgatgatacacgtatgagaatgaagtgtaaagatctagagacttta 18144911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 429
Target Start/End: Original strand, 29171528 - 29171590
Alignment:
Q  367 tttatgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| | |||||||| ||||    
T  29171528 tttatgtaacgccctctttgaattatttgatttatttgattgttttaataagtttagaatata 29171590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 20629014 - 20629069
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  20629014 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagt 20629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 426
Target Start/End: Original strand, 12118596 - 12118649
Alignment:
Q  373 taaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  12118596 taacgccctctttgaattatttgttttatttgattattttattgagtttagagt 12118649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 17681621 - 17681564
Alignment:
Q  369 tatgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  17681621 tatgtaacgccctctttgaattatttgttttatttgattattttatttagtttagagt 17681564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 24514739 - 24514686
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24514739 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttaga 24514686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 55318198 - 55318253
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| || ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  55318198 tgtaacgccttctttgaattatttgttttatttgattattttattgagtttagagt 55318253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 12568168 - 12568110
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| ||||||||||| |||||||||||||||||||||||| | |||||||| ||||    
T  12568168 tgtaacgccctctttgaaatatttgatttatttgattgttttaataagtttagaatata 12568110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 13544632 - 13544574
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| ||||||||||| |||||||||||||||||||||||| | |||||||| ||||    
T  13544632 tgtaacgccctctttgaaatatttgatttatttgattgttttaataagtttagaatata 13544574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 357
Target Start/End: Original strand, 10899242 - 10899509
Alignment:
Q  87 catcatcaggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgca 186  Q
    ||||| |||| |||||  ||||||||| |||||| || | || ||||| ||||| ||| |||||    || || |||||||||||||| | || ||| ||    
T  10899242 catcaacagggatagatctcaagacacctatggaggtttggagtgggagaccggtagactactctaacttaaaagttttcagagctttagcatttgctca 10899341  T
Q  187 tatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagt 286  Q
    | |||  |||||||| |||||  |||||||| |||| ||| | ||||| |||||||| |||||| |||| ||||| |   |||||||  | ||| |   |    
T  10899342 tgtcagacaagacaaacttgatgctagagctgtgaagtgtattttcatgggttatcctgaaggtgtgaaaggttatagactgtggaagatggaacc---t 10899438  T
Q  287 ggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||| |||| |  | || || ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  10899439 ggaggatcaaaatttattataagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 10899509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 357
Target Start/End: Original strand, 16459765 - 16459964
Alignment:
Q  155 ttgaaggttttcagagctttggaatatgcgcatatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatga 254  Q
    ||||| |||||| ||||||| |  | ||||||| ||| ||||||||| |||||  |||||||| |||| ||| | ||||| |||||||  |||||| |||    
T  16459765 ttgaaagttttcggagctttagcgtttgcgcatgtcatgcaagacaaacttgatgctagagctgtgaagtgtattttcatgggttatcttgaaggtgtga 16459864  T
Q  255 agggttacaagttgtggaaattagaatctagtggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaa 354  Q
    | |||||||   |||||||  | ||| ||   ||||||| |||| |  | || || ||||||||||| ||||||||||| || |||||||||||||| ||    
T  16459865 aaggttacagactgtggaagatggaacct---ggaggatcaaaatttatcataagcagggatgttacttttgatgagacccgcatggggatgaagtgcaa 16459961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 357
Target Start/End: Complemental strand, 22623859 - 22623660
Alignment:
Q  155 ttgaaggttttcagagctttggaatatgcgcatatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatga 254  Q
    ||||| |||||| ||||||| |  | ||| ||| ||| ||||||||| |||||  |||||||| |||| ||| | ||||| |||||||| |||||| |||    
T  22623859 ttgaaagttttcggagctttagcgtttgctcatgtcaggcaagacaaacttgatgctagagctatgaagtgtattttcatgggttatcctgaaggtgtga 22623760  T
Q  255 agggttacaagttgtggaaattagaatctagtggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaa 354  Q
    | |||||||   |||||||  | ||| ||   ||||||| |||| |  | || || ||||||||||| ||||||||||| || |||||||||||||| ||    
T  22623759 aaggttacagactgtggaagatggaacct---ggaggatcaaaatttataataagcagggatgttacttttgatgagacccgaatggggatgaagtgcaa 22623663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 413
Target Start/End: Original strand, 178151 - 178194
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||    
T  178151 atgtaacaccctctttgaattatttaatttatttgattgtttta 178194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 16854173 - 16854228
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||||||||||    
T  16854173 tgtaacgccctctttgaattatttgttttatttaattatttgattgagtttagagt 16854228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 413
Target Start/End: Original strand, 52465053 - 52465096
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||||  |||||||||||||||||||||||||||||||||||    
T  52465053 atgtaacgtcctctttgaattatttgatttatttgattgtttta 52465096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 357
Target Start/End: Complemental strand, 10610703 - 10610454
Alignment:
Q  105 tcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaagacaagct 204  Q
    ||||||||| |||||| || | || ||||| ||||| ||| |||||    ||||| |||||| ||||||| |  | ||| ||| |||  |||||||| ||    
T  10610703 tcaagacacctatggaggtttggagtgggagaccggtagactactctaacttgaaagttttcggagctttagcgtttgctcatgtcagacaagacaaact 10610604  T
Q  205 tgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaaagtcttg 304  Q
    |||  |||||||| |||| ||| | ||||| |||||||| |||||| |||| |||||||   |||||||  | ||| ||   ||||||| |||| |  |     
T  10610603 tgatgctagagctgtgaagtgtattttcatgggttatcctgaaggtgtgaaaggttacagactgtggaagatggaacct---ggaggatcaaaatttatt 10610507  T
Q  305 attagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    || || ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  10610506 ataagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 10610454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 22792570 - 22792512
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| ||||||||||| |||||| |||| |||||| |||||||||||||||| ||||    
T  22792570 tgtaacgccctctttgaaatatttgttttagttgattattttattgagtttagaatata 22792512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 43549333 - 43549375
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||| ||||||||||||||||||||||||||||    
T  43549333 tgtaacgccctcttggaattatttgatttatttgattgtttta 43549375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 15978827 - 15978774
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  15978827 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 15978774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 357
Target Start/End: Original strand, 54190848 - 54191008
Alignment:
Q  194 caagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggat 293  Q
    |||||||| |||||  |||||||| |||| ||| | ||||| |||||||| |||||| |||| |||||||   |||||||  | ||| ||   |||||||    
T  54190848 caagacaaacttgatgctagagctgtgaagtgtattttcatgggttatcctgaaggtgtgaaaggttacagactgtggaagatggaacct---ggaggat 54190944  T
Q  294 gaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
     |||| |  | || || ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  54190945 caaaatttattataagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 54191008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 357
Target Start/End: Original strand, 6305544 - 6305811
Alignment:
Q  87 catcatcaggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgca 186  Q
    ||||| |||| |||||  ||||||||| |||||| || | || ||||| ||||||||| |||||    ||||| || ||| ||||||| |  | ||| ||    
T  6305544 catcaacagggatagatctcaagacacctatggaggtttggagtgggagaccggcagactactctaacttgaaagtcttcggagctttagcgtttgccca 6305643  T
Q  187 tatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagt 286  Q
    | ||| ||||||||| |||||  |||||||| |||| ||| | ||||| |||||||| |||||| |||| ||||| |   |||||||  | ||| ||       
T  6305644 tgtcaggcaagacaaacttgatgctagagctgtgaagtgtattttcatgggttatcctgaaggtgtgaaaggttatagactgtggaagatggaacct--- 6305740  T
Q  287 ggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    |||| || |||| |  | || || ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  6305741 ggagaatcaaaatttattataagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 6305811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 7780222 - 7780270
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  7780222 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 7780270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 413
Target Start/End: Complemental strand, 11202592 - 11202552
Alignment:
Q  373 taaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  11202592 taacgccctctttgaattatttgatttatttgtttgtttta 11202552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 21619797 - 21619749
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  21619797 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 21619749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 27166440 - 27166392
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  27166440 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 27166392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 28847487 - 28847535
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  28847487 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 28847535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 34160619 - 34160571
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  34160619 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 34160571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 17464471 - 17464420
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    |||||| |||||||| ||||||||||||||||| ||| ||| ||||||||||    
T  17464471 tgtaacgccctctttaaattatttgatttatttaattatttaattgagttta 17464420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 429
Target Start/End: Complemental strand, 46824377 - 46824326
Alignment:
Q  378 ccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    ||||||||||| |||||||||||||| ||||||||| | |||||||| ||||    
T  46824377 ccctctttgaaatatttgatttatttaattgttttaataagtttagaatata 46824326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 10096533 - 10096487
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  10096533 agggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 10096487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 10203419 - 10203373
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  10203419 agggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 10203373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 29911680 - 29911634
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  29911680 agggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 29911634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 8500700 - 8500663
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattg 408  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  8500700 tgtaacaccctctttgaattatttgatttatttaattg 8500663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 55477782 - 55477729
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  55477782 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 55477729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 9117102 - 9117150
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  9117102 tgtaacgccctctttgaattattagatttatttcattatttaattgagt 9117150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 10246591 - 10246639
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||| ||||||||||||||||||||| ||| ||| |||||||    
T  10246591 tgtaacgccctttttgaattatttgatttatttaattatttaattgagt 10246639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 13150657 - 13150705
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  13150657 tgtaacgccctctttgaattattagatttatttcattatttaattgagt 13150705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 13153125 - 13153173
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  13153125 tgtaacgccctctttgaattattagatttatttcattatttaattgagt 13153173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 16453143 - 16453191
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||| ||||||||||||||||| ||| ||| |||||||    
T  16453143 tgtaacgccctctttaaattatttgatttatttaattatttaattgagt 16453191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 426
Target Start/End: Original strand, 18366187 - 18366215
Alignment:
Q  398 ttatttgattgttttattgagtttagagt 426  Q
    |||||||||||||||||||||||||||||    
T  18366187 ttatttgattgttttattgagtttagagt 18366215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 45605795 - 45605843
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||| ||||||||||||||||| ||| ||| |||||||    
T  45605795 tgtaacgccctctttaaattatttgatttatttaattatttaattgagt 45605843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 216; Significance: 1e-118; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 95 - 370
Target Start/End: Original strand, 24557781 - 24558056
Alignment:
Q  95 ggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagc 194  Q
    |||||| |||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||||||||  ||||||||| |||||||||||||||||    
T  24557781 ggaataaacttcaagacacctatggaagtatggagtgggaaaccggcagattactcatcattgaaggtttttggagctttggcatatgcgcatatcaagc 24557880  T
Q  195 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||     
T  24557881 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggttacaagttgtggaaattggaatctagtggaggatc 24557980  T
Q  295 aaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  24557981 aaaagtcttgattagcagggacgttacctttgatgagactcgtatggggatgaagtgtaaagacctagagacttta 24558056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 95 - 370
Target Start/End: Original strand, 24598813 - 24599088
Alignment:
Q  95 ggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagc 194  Q
    |||||| |||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||||||||  ||||||||| |||||||||||||||||    
T  24598813 ggaataaacttcaagacacctatggaagtatggagtgggaaaccggcagattactcatcattgaaggtttttggagctttggcatatgcgcatatcaagc 24598912  T
Q  195 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||     
T  24598913 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggttacaagttgtggaaattggaatctagtggaggatc 24599012  T
Q  295 aaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  24599013 aaaagtcttgattagcagggacgttacctttgatgagactcgtatggggatgaagtgtaaagacctagagacttta 24599088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 87 - 370
Target Start/End: Complemental strand, 28836199 - 28835917
Alignment:
Q  87 catcatcaggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgca 186  Q
    ||||| || |||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| ||||||| |||||||| | |||||| |    
T  28836199 catcaacatgaatagacttcaagacacctatggaagtatggagtgggaaaccggtagattactcatctttgatggttttcggagctttgca-tatgcgta 28836101  T
Q  187 tatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagt 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||    
T  28836100 tatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgagaagggttacaagttgtggaaattggaatctagt 28836001  T
Q  287 ggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  28836000 ggaggatcaaaagtcttgattagtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagacttta 28835917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 98 - 367
Target Start/End: Complemental strand, 43595008 - 43594739
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  43595008 atagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagcaag 43594909  T
Q  198 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||     
T  43594908 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatcaag 43594809  T
Q  298 agtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||  ||||||||    
T  43594808 agtcttgataagtagggatgttacctttgatgagacccgtatggggatgaagtgcaaagacctagagact 43594739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 98 - 367
Target Start/End: Complemental strand, 43627802 - 43627533
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  43627802 atagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagcaag 43627703  T
Q  198 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||     
T  43627702 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatcaag 43627603  T
Q  298 agtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||  ||||||||    
T  43627602 agtcttgataagtagggatgttacctttgatgagacccgtatggggatgaagtgcaaagacctagagact 43627533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 98 - 367
Target Start/End: Complemental strand, 27447710 - 27447441
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  27447710 atagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagcaag 27447611  T
Q  198 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||     
T  27447610 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatcaag 27447511  T
Q  298 agtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    || |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||  ||||||||    
T  27447510 agccttgataagtagggatgttacctttgatgagacccgtatgaggatgaagtgtaaagacctagagact 27447441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 95 - 367
Target Start/End: Original strand, 31399189 - 31399461
Alignment:
Q  95 ggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagc 194  Q
    ||||||||||||||||||| |||||| |||| || ||||||||||||  ||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  31399189 ggaatagacttcaagacacctatggaggtatggagtgggaaaccggcgaattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagc 31399288  T
Q  195 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| |||     
T  31399289 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggatacaagttgtggaaattggaatctagtggaagatc 31399388  T
Q  295 aaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    || ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||    
T  31399389 aagagtcttgataagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacttagagact 31399461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 98 - 367
Target Start/End: Original strand, 37558802 - 37559071
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || |||||||||||  |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  37558802 atagacttcaagacacttatggaggtatggagtgggaaaccggtggattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagcaag 37558901  T
Q  198 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||     
T  37558902 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatcaag 37559001  T
Q  298 agtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    |||| |||| |||||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||    
T  37559002 agtcgtgataagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagact 37559071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 95 - 367
Target Start/End: Complemental strand, 33789246 - 33788974
Alignment:
Q  95 ggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagc 194  Q
    ||||||||||||||||||| |||||| |||| || |||||||||||  |||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  33789246 ggaatagacttcaagacacctatggaggtatggagtgggaaaccggtggattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagc 33789147  T
Q  195 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| |||||||||||| |||     
T  33789146 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggatataagttgtggaaattggaatctagtggaagatc 33789047  T
Q  295 aaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    || ||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||    
T  33789046 aagagtcttgataagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagact 33788974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 246 - 367
Target Start/End: Original strand, 28805070 - 28805191
Alignment:
Q  246 aaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggat 345  Q
    ||||| ||||||| |||||||||||||||||  ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| || ||| ||||    
T  28805070 aaggtgtgaaggggtacaagttgtggaaattgaaatctagtggaggatcaagagtcttgataagtagggatgttacctttgatgagacccggatgaggat 28805169  T
Q  346 gaagtgtaaagatttagagact 367  Q
    ||||||||||||  ||||||||    
T  28805170 gaagtgtaaagacctagagact 28805191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 11580135 - 11580193
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  11580135 tgtaacgccctctttgaattacttgatttatttgattgttttaatgagtttagagtata 11580193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 371 - 423
Target Start/End: Complemental strand, 29331283 - 29331231
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttag 423  Q
    |||||| |||||||||||||||||||||||||||||||||||| | |||||||    
T  29331283 tgtaacgccctctttgaattatttgatttatttgattgttttaataagtttag 29331231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 413
Target Start/End: Complemental strand, 6767130 - 6767087
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  6767130 atgtaacgccctctttgaattatttgatttatttgattgtttta 6767087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 24474366 - 24474311
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  24474366 tgtaacgccctctttgaattatttgttttatttgattattttattaagtttagagt 24474311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 412
Target Start/End: Complemental strand, 17012172 - 17012130
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgtttt 412  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  17012172 atgtaacgccctctttgaattatttgatttatttgattgtttt 17012130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 22241585 - 22241627
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  22241585 tgtaacgccctctttgaattatttgatttatttgattgtttta 22241627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 22242581 - 22242623
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  22242581 tgtaacgccctctttgaattatttgatttatttgattgtttta 22242623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 22243577 - 22243619
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  22243577 tgtaacgccctctttgaattatttgatttatttgattgtttta 22243619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 413
Target Start/End: Complemental strand, 6555491 - 6555447
Alignment:
Q  369 tatgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||    
T  6555491 tatgtaacgccctctttgaattatttaatttatttgattgtttta 6555447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 413
Target Start/End: Complemental strand, 29449216 - 29449176
Alignment:
Q  373 taaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  29449216 taacgccctctttgaattatttgatttatttgattgtttta 29449176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 423
Target Start/End: Original strand, 17515839 - 17515882
Alignment:
Q  380 ctctttgaattatttgatttatttgattgttttattgagtttag 423  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
T  17515839 ctctttgaattatttgatttatttgattgttttaataagtttag 17515882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 413
Target Start/End: Complemental strand, 17876638 - 17876595
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  17876638 atgtaacgccctctttgaattatttgatttagttgattgtttta 17876595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 413
Target Start/End: Complemental strand, 22471202 - 22471159
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||    
T  22471202 atgtaacgccctctttgaattatttaatttatttgattgtttta 22471159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 6554888 - 6554846
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  6554888 tgtaacgccctctttgaattatttaatttatttgattgtttta 6554846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 413
Target Start/End: Original strand, 22240597 - 22240631
Alignment:
Q  379 cctctttgaattatttgatttatttgattgtttta 413  Q
    |||||||||||||||||||||||||||||||||||    
T  22240597 cctctttgaattatttgatttatttgattgtttta 22240631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 20910308 - 20910260
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  20910308 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 20910260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 21574043 - 21573995
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgag 418  Q
    ||||||| |||||||||||||||||||||||||| ||| ||||| ||||    
T  21574043 atgtaacaccctctttgaattatttgatttatttaattattttaatgag 21573995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 23065751 - 23065703
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  23065751 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 23065703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 424
Target Start/End: Complemental strand, 39246433 - 39246382
Alignment:
Q  373 taaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  39246433 taacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 39246382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 405
Target Start/End: Complemental strand, 40727062 - 40727027
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttga 405  Q
    ||||||| ||||||||||||||||||||||||||||    
T  40727062 atgtaacgccctctttgaattatttgatttatttga 40727027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 2153626 - 2153668
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| |||||||  |||||||||||||||||||||||||||    
T  2153626 tgtaacgccctcttgaaattatttgatttatttgattgtttta 2153668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 22413460 - 22413418
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| |||| || ||||||||||||||||||||||||||||    
T  22413460 tgtaacgcccttttggaattatttgatttatttgattgtttta 22413418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 25447942 - 25447988
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  25447942 agggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 25447988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 29352221 - 29352172
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  29352221 atgtaacgccctctttgaattattagatttatttaattatttaattgagt 29352172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 38620723 - 38620682
Alignment:
Q  378 ccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||||||||||||||||||||||| ||| ||| |||||||    
T  38620723 ccctctttgaattatttgatttatttaattatttaattgagt 38620682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 39364678 - 39364629
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  39364678 atgtaacgccctctttgaattattagatttatttcattatttaattgagt 39364629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 41860242 - 41860283
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttt 412  Q
    |||||| |||||||||||||||||| ||||||||||| ||||    
T  41860242 tgtaacgccctctttgaattatttgttttatttgattatttt 41860283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 42244229 - 42244278
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  42244229 atgtaacgccctctttgaattattagatttatttaattatttaattgagt 42244278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 263638 - 263686
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  263638 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 263686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 10731806 - 10731854
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  10731806 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 10731854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 29347274 - 29347226
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  29347274 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 29347226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 29349747 - 29349699
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  29349747 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 29349699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 31144225 - 31144177
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||| ||||||||||||||||| ||| ||| |||||||    
T  31144225 tgtaacgccctctttcaattatttgatttatttaattatttaattgagt 31144177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 208; Significance: 1e-113; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 98 - 357
Target Start/End: Original strand, 14739772 - 14740031
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  14739772 atagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagcaag 14739871  T
Q  198 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||     
T  14739872 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatcaag 14739971  T
Q  298 agtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14739972 agtcttgattagtagggatgttacctttgatgagacccgtatggggatgaagtgtaaaga 14740031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 95 - 367
Target Start/End: Original strand, 33333273 - 33333545
Alignment:
Q  95 ggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagc 194  Q
    |||||||||||||||| || |||||| |||| || |||||||||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  33333273 ggaatagacttcaagatacctatggaggtatggagtgggaaaccggcggattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagc 33333372  T
Q  195 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||||||||||| |||     
T  33333373 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatcaggaaggtgtgaagggatacaagttgtggaaattggaatctagtggaagatc 33333472  T
Q  295 aaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    || ||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||    
T  33333473 aagagtcttgataagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagact 33333545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 93 - 370
Target Start/End: Original strand, 24433515 - 24433792
Alignment:
Q  93 caggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaa 192  Q
    ||||||||||||||||||| | ||| |||  || ||  |||||||| |||  |||||||||||||||||||||| ||| ||||  |||||||||||||||    
T  24433515 caggaatagacttcaagacgcctattgaaaaatggagcgggaaaccagcaatttactcatctttgaaggttttcggagttttgacatatgcgcatatcaa 24433614  T
Q  193 gcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggagga 292  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||| |||||||||||||||    
T  24433615 tcaatacaagcttgagcctagagctttgaaatgtgtcttcattggttatctggaaggtgtgaagggttacaagttgtgtaaatttgaatctagtggagga 24433714  T
Q  293 tgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  |||||||||||    
T  24433715 tcaaaagtcttgattagtagggatgttacctttgatgagacccgtatggggatgaagtctaaagacctagagacttta 24433792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 20184131 - 20184073
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  20184131 tgtaacgccctctttgaatcatttgatttatttgagtattttattgagtttagagtata 20184073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 22151860 - 22151918
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  22151860 tgtaacgccctctttgaatcatttgatttatttgagtattttattgagtttagagtata 22151918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 25618537 - 25618595
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| |||||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  25618537 tgtaacgccctctttgaattatttgatttatttgattgttttaataggtttagagtata 25618595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 413
Target Start/End: Original strand, 15173061 - 15173104
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  15173061 atgtaacgccctctttgaattatttgatttatttgattgtttta 15173104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 413
Target Start/End: Original strand, 15900262 - 15900305
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  15900262 atgtaacgccctctttgaattatttgatttatttgattgtttta 15900305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 429
Target Start/End: Complemental strand, 23993646 - 23993587
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    ||||||| ||||||||||| |||||||||||||||||||||||| | |||||||| ||||    
T  23993646 atgtaacgccctctttgaaatatttgatttatttgattgttttaataagtttagaatata 23993587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 425
Target Start/End: Complemental strand, 15876918 - 15876864
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagag 425  Q
    |||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  15876918 tgtaacgccctctttgagttatttgttttatttgattattttattgagtttagag 15876864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 18318136 - 18318078
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| |||||||||||||||||| ||||||||||| ||||| |||||||||| ||||    
T  18318136 tgtaacaccctctttgaattatttgttttatttgattattttaatgagtttagaatata 18318078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 18697801 - 18697759
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  18697801 tgtaacgccctctttgaattatttgatttatttgattgtttta 18697759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 23540370 - 23540317
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| ||||||||||||||||||||||||||||||  |||| ||||||||||    
T  23540370 tgtaacgccctctttgaattatttgatttatttgattactttaatgagtttaga 23540317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 357
Target Start/End: Complemental strand, 35204011 - 35203744
Alignment:
Q  87 catcatcaggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgca 186  Q
    ||||| |||| |||||  ||||||||| |||||| || | || ||||| ||||||||| |||||    ||||| || ||| ||||||| |  | ||| ||    
T  35204011 catcaacagggatagatctcaagacacctatggaggtttggagtgggagaccggcagactactctaacttgaaagtcttcggagctttagcgtttgccca 35203912  T
Q  187 tatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagt 286  Q
    | ||| ||||||||| |||||  |||||||| |||| ||| | ||||| |||||||| |||||| |||| ||||| |   |||||||  | ||| ||       
T  35203911 tgtcaggcaagacaaacttgatgctagagctgtgaagtgtattttcatgggttatcctgaaggtgtgaaaggttatagactgtggaagatggaacct--- 35203815  T
Q  287 ggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||| |||| |  | || || ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  35203814 ggaggatcaaaatttattataagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 35203744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 8056323 - 8056272
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    |||||| |||||||||||||||||||||||||| ||| ||| ||||||||||    
T  8056323 tgtaacgccctctttgaattatttgatttatttaattatttaattgagttta 8056272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 413
Target Start/End: Complemental strand, 18707545 - 18707510
Alignment:
Q  378 ccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||||||||||||||||||||||||||||||||    
T  18707545 ccctctttgaattatttgatttatttgattgtttta 18707510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 25689983 - 25689932
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    |||||| |||| ||||||||||||||||||||||||||||||| | ||||||    
T  25689983 tgtaacgccctatttgaattatttgatttatttgattgttttaataagttta 25689932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 196 - 357
Target Start/End: Original strand, 25944011 - 25944169
Alignment:
Q  196 agacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatga 295  Q
    |||||| |||||  |||||||| |||||||| | ||||| |||||||| |||||| |||| |||||||   |||||||  | ||| ||   ||||||| |    
T  25944011 agacaaacttgatgctagagctgtgaaatgtattttcatgggttatcctgaaggtgtgaaaggttacagactgtggaagatggaacct---ggaggatca 25944107  T
Q  296 aaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||| |  | || || ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  25944108 aaatttattataagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 25944169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 14978180 - 14978238
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| ||| |||||||||||||||||||||||||||||| | |  ||||||||||||    
T  14978180 tgtaacgcccactttgaattatttgatttatttgattgtttaaataggtttagagtata 14978238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 23664666 - 23664708
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| |||| |||||||||||||||||||||||||||||||    
T  23664666 tgtaacaccctatttgaattatttgatttatttgattgtttta 23664708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 25596935 - 25596977
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||| ||||||||||||||||||||||||||||    
T  25596935 tgtaacgccctcttggaattatttgatttatttgattgtttta 25596977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 4971477 - 4971530
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  4971477 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 4971530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 16198790 - 16198737
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  16198790 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 16198737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 17882365 - 17882418
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  17882365 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 17882418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 18179688 - 18179635
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  18179688 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 18179635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 33865572 - 33865523
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  33865572 atgtaacgccctctttgaattatttgatttatttaattatttaattgagt 33865523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 422
Target Start/End: Original strand, 1539787 - 1539831
Alignment:
Q  378 ccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||    
T  1539787 ccctctttgaattatttgatttatttaattatttaattgagttta 1539831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 20104455 - 20104503
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  20104455 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 20104503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 22783520 - 22783472
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  22783520 tgtaacaccctctttgaattatttgatttatttaattatttaattgagt 22783472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 33863090 - 33863042
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  33863090 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 33863042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 4642739 - 4642798
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgatt-gttttattgagtttagagtata 429  Q
    |||||| |||||||||||||||||| |||||||||||  ||||| |||||||||| ||||    
T  4642739 tgtaacaccctctttgaattatttgttttatttgattatttttaatgagtttagaatata 4642798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 429
Target Start/End: Original strand, 18258855 - 18258886
Alignment:
Q  398 ttatttgattgttttattgagtttagagtata 429  Q
    ||||||||||||||||||||||||||||||||    
T  18258855 ttatttgattgttttattgagtttagagtata 18258886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 419
Target Start/End: Original strand, 26923311 - 26923362
Alignment:
Q  368 ttatgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  26923311 ttatgtaacgccctctttgaattattagatttatttaattatttaattgagt 26923362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 4290043 - 4290093
Alignment:
Q  369 tatgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  4290043 tatgtaacgccctctttgaattattagatttatttaattatttaattgagt 4290093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 424
Target Start/End: Original strand, 5114859 - 5114905
Alignment:
Q  378 ccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  5114859 ccctctttgaattatttgttttatttaattgtttaattgagtctaga 5114905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 13881193 - 13881239
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  13881193 agggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 13881239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 18179108 - 18179050
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| |||||||||||| ||||| ||||||| ||||||| ||||| |||||| ||||    
T  18179108 tgtaacgccctctttgaataatttgttttatttaattgtttaattgaatttagaatata 18179050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 424
Target Start/End: Original strand, 21738518 - 21738572
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    ||||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  21738518 atgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 21738572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 22348702 - 22348656
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  22348702 agggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 22348656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 31735438 - 31735396
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| |||||||||||||||| ||||||||||||| |||||    
T  31735438 tgtaacgccctctttgaattattcgatttatttgattatttta 31735396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 12712732 - 12712672
Alignment:
Q  371 tgtaaccccctctttga--attatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| ||||||||||  | |||||||||||||||||||||||| | |||||||| ||||    
T  12712732 tgtaacgccctctttgagaaatatttgatttatttgattgttttaataagtttagaatata 12712672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 15738497 - 15738444
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  15738497 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 15738444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 15741277 - 15741224
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  15741277 tgtaacaccctctttgaattatttgttttatttaattatttaattgagtctaga 15741224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 17692578 - 17692533
Alignment:
Q  312 gggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    |||||||||| ||||||||||| || |||||||||||||| |||||    
T  17692578 gggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 17692533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 19174654 - 19174605
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  19174654 atgtaacgccctctttgaattattagatttatttaattatttaattgagt 19174605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 19857808 - 19857861
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| || ||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  19857808 tgtaacaccgtctttgaattatttgttttatttaattgtttaattgagtctaga 19857861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 23531550 - 23531603
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  23531550 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 23531603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 2290046 - 2290094
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| | |||||||||||||||||||||||| ||| ||| |||||||    
T  2290046 tgtaacgcactctttgaattatttgatttatttaattatttaattgagt 2290094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 18333461 - 18333509
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  18333461 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 18333509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 24423782 - 24423734
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  24423782 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 24423734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 31185004 - 31184956
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  31185004 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 31184956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 208; Significance: 1e-113; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 95 - 366
Target Start/End: Original strand, 9226598 - 9226869
Alignment:
Q  95 ggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagc 194  Q
    ||||||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  9226598 ggaatagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagc 9226697  T
Q  195 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||     
T  9226698 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatc 9226797  T
Q  295 aaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagac 366  Q
    || ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||    
T  9226798 aagagtcttgataagtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagac 9226869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 95 - 367
Target Start/End: Complemental strand, 18858466 - 18858194
Alignment:
Q  95 ggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagc 194  Q
    ||||||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  18858466 ggaatagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagc 18858367  T
Q  195 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||     
T  18858366 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatc 18858267  T
Q  295 aaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    || ||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||    
T  18858266 aagagtcttgataagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagact 18858194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 97 - 369
Target Start/End: Complemental strand, 5145796 - 5145524
Alignment:
Q  97 aatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaa 196  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| ||    
T  5145796 aatagacttcaagacacctatggaagtatggaatgggaaaccggcagactactcatctttgaaggttttcggagctttggcatatgcgcatatcaagaaa 5145697  T
Q  197 gacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaa 296  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||| ||    
T  5145696 gacaagcttgagactagagctttgaaatgtgtctttattcgttatccagaaggtgtgaagggttacaagttgtggaaattggaatctagtggaggatcaa 5145597  T
Q  297 aagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagacttt 369  Q
    |||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||  ||||||||||    
T  5145596 aagtcttgattagtagggatattacctttgatgagacccgtatagggatgaagtgtaaagacctagagacttt 5145524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 98 - 351
Target Start/End: Original strand, 16626193 - 16626446
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  16626193 atagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcttctttgaaggttttctgagctttgacatatgcgcatatcaagcaag 16626292  T
Q  198 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaa 297  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| |||    
T  16626293 acaagcttgagcctagagctttgaaatgtatcttcattggttatccggaaggtctgaagggttacgagttgtggaaattggaatctagtggaggatcaaa 16626392  T
Q  298 agtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtg 351  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16626393 agtcttgattagtagggatgttacctttgatgagacccgtatggggatgaagtg 16626446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 15488954 - 15489009
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  15488954 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagt 15489009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 370 - 429
Target Start/End: Original strand, 44927546 - 44927605
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    ||||||| |||||||||||||||||||||||||||||||||||| | |||||||| ||||    
T  44927546 atgtaacgccctctttgaattatttgatttatttgattgttttaataagtttagaatata 44927605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 52871205 - 52871150
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  52871205 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagt 52871150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 426
Target Start/End: Original strand, 14826766 - 14826819
Alignment:
Q  373 taaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  14826766 taacgccctctttgaattatttgttttatttgattattttattgagtttagagt 14826819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 372 - 424
Target Start/End: Original strand, 18214181 - 18214233
Alignment:
Q  372 gtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  18214181 gtaacgccctctttgaattatttgatttatttgattgtttaattgagtctaga 18214233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 23802003 - 23802055
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttag 423  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||||||||||    
T  23802003 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttag 23802055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 1604188 - 1604243
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  1604188 tgtaacgccctctttgaattattttttttatttgattattttattgagtttagagt 1604243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 429
Target Start/End: Complemental strand, 14035407 - 14035356
Alignment:
Q  378 ccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||||||||||||||||||||||||||||||||| | |||||||| ||||    
T  14035407 ccctctttgaattatttgatttatttgattgttttaataagtttagaatata 14035356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 426
Target Start/End: Original strand, 14745170 - 14745217
Alignment:
Q  379 cctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  14745170 cctctttgaattatttgttttatttgattattttattgagtttagagt 14745217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 422
Target Start/End: Original strand, 15480499 - 15480550
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  15480499 tgtaacgccctctttgaattatttgttttatttgattattttattgagttta 15480550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 12841936 - 12841894
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  12841936 tgtaacgccctctttgaattatttgatttatttgattgtttta 12841894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 18259629 - 18259571
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| ||||||||||| |||||||||||||||||||||||| | |||||||| ||||    
T  18259629 tgtaacgccctctttgaaatatttgatttatttgattgttttaataagtttagaatata 18259571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 14827135 - 14827080
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| ||||||||||||||| || ||||||||||| | ||||||||||||||||    
T  14827135 tgtaacaccctctttgaattatctgttttatttgattatattattgagtttagagt 14827080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 19858971 - 19858916
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||| ||||||||||| ||||||||||| || |||||||||||||||    
T  19858971 tgtaacgccctctctgaattatttgttttatttgattattctattgagtttagagt 19858916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 413
Target Start/End: Complemental strand, 40620976 - 40620933
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||| |||||||| |||||||||||||||||||||||||||    
T  40620976 atgtaacgccctctttaaattatttgatttatttgattgtttta 40620933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 44432059 - 44432008
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    |||||| |||||||||||||||||||||||||| ||| ||| ||||||||||    
T  44432059 tgtaacgccctctttgaattatttgatttatttaattatttaattgagttta 44432008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 357
Target Start/End: Original strand, 4567590 - 4567839
Alignment:
Q  105 tcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaagacaagct 204  Q
    ||||||||| |||||| || | || ||||| | ||||||| |||||   |||||| |||||| ||||||| | || ||| ||| |||  || ||||| ||    
T  4567590 tcaagacacctatggaggtttggagtgggagatcggcagactactctaatttgaaagttttcggagctttagcatttgctcatgtcagacaggacaaact 4567689  T
Q  205 tgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaaagtcttg 304  Q
    |||  |||||| | |||| ||| | ||||| |||||||| |||||| |||| |||||||   |||||||  | ||| ||   ||||||| |||| |  |     
T  4567690 tgatgctagagttgtgaagtgtattttcatgggttatcctgaaggtgtgaaaggttacagactgtggaagatggaacct---ggaggatcaaaatttatt 4567786  T
Q  305 attagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    || || ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  4567787 ataagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 4567839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 417
Target Start/End: Complemental strand, 55990683 - 55990637
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattga 417  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||||    
T  55990683 tgtaacgccctctttgaattatttgttttatttgattattttattga 55990637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 18238481 - 18238534
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  18238481 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 18238534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 1836388 - 1836436
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  1836388 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 1836436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 7640055 - 7640103
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  7640055 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 7640103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 14717588 - 14717636
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  14717588 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 14717636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 429
Target Start/End: Complemental strand, 19243982 - 19243922
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgatt-gttttattgagtttagagtata 429  Q
    ||||||| |||||||||||||||||| |||||||||||  ||||| |||||||||| ||||    
T  19243982 atgtaacgccctctttgaattatttgttttatttgattatttttaatgagtttagaatata 19243922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 29268649 - 29268601
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  29268649 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 29268601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 413
Target Start/End: Complemental strand, 15991645 - 15991610
Alignment:
Q  378 ccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||||||||||||| ||||||||||||||||||    
T  15991645 ccctctttgaattatttaatttatttgattgtttta 15991610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 424
Target Start/End: Original strand, 54797524 - 54797579
Alignment:
Q  369 tatgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  54797524 tatgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 54797579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 413
Target Start/End: Complemental strand, 14186833 - 14186799
Alignment:
Q  379 cctctttgaattatttgatttatttgattgtttta 413  Q
    |||||||||||||||||||||||| ||||||||||    
T  14186833 cctctttgaattatttgatttattcgattgtttta 14186799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 14281665 - 14281612
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  14281665 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtgtaga 14281612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 44616581 - 44616528
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  44616581 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 44616528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 3840948 - 3840996
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  3840948 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 3840996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 12032640 - 12032688
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  12032640 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 12032688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 12747728 - 12747776
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  12747728 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 12747776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 15117221 - 15117269
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  15117221 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 15117269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 16634929 - 16634973
Alignment:
Q  313 ggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||||| ||||||||| | ||||||||||||||||| |||||    
T  16634929 ggatgttacttttgatgaggcccgtatggggatgaagtgcaaaga 16634973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 311 - 351
Target Start/End: Original strand, 36770044 - 36770084
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtg 351  Q
    ||||||||||| ||||||||||| || ||||||||||||||    
T  36770044 agggatgttacttttgatgagacccgcatggggatgaagtg 36770084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 44771967 - 44772015
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| |||||||    
T  44771967 tgtaacgccctctttgaattatttgttttatttaattatttaattgagt 44772015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 50221208 - 50221256
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  50221208 tgtaacgccctctttgaattattagatttatttcattatttaattgagt 50221256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 206; Significance: 1e-112; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 98 - 367
Target Start/End: Complemental strand, 25393773 - 25393504
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || ||||||||||||||||||||||||||||||||||| | ||||||||| |||||| |||||||||||||    
T  25393773 atagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcatctttgaaggtttacggagctttggcatatgcacatatcaagcaag 25393674  T
Q  198 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||     
T  25393673 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatcaag 25393574  T
Q  298 agtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  25393573 agtcttgattagtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagact 25393504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 95 - 367
Target Start/End: Complemental strand, 19347168 - 19346896
Alignment:
Q  95 ggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagc 194  Q
    ||||||||||||||||||| |||||| |||| || |||||||||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  19347168 ggaatagacttcaagacacctatggaggtatggagtgggaaaccggcggattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagc 19347069  T
Q  195 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| ||||| |||||||||||| |||     
T  19347068 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggatataagttgtgaaaattggaatctagtggaagatc 19346969  T
Q  295 aaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    || ||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||    
T  19346968 aagagtcttgataagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagact 19346896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 145 - 308
Target Start/End: Original strand, 39485468 - 39485631
Alignment:
Q  145 ttactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccg 244  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39485468 ttactcatctttgaaggttttcggagctttggcatatgcgcatatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccg 39485567  T
Q  245 gaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaaagtcttgatta 308  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  39485568 gaaggtgtgaagggttacaagttgtggaaattggaatctagtggaggatcaaaagtcttgatta 39485631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 243 - 370
Target Start/End: Complemental strand, 31058700 - 31058573
Alignment:
Q  243 cggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggg 342  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  31058700 cggaaggtgtgaagggttacaagttgtggaaattggaatctagtggagggtcaaaagtcttgattagtaggtatgttacctttgatgagacccgtatggg 31058601  T
Q  343 gatgaagtgtaaagatttagagacttta 370  Q
    |||||||||||||||  |||||||||||    
T  31058600 gatgaagtgtaaagacctagagacttta 31058573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 254 - 370
Target Start/End: Complemental strand, 39485468 - 39485352
Alignment:
Q  254 aagggttacaagttgtggaaattagaatctagtggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgta 353  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||  ||||||| ||||||||||    
T  39485468 aagggttacaagttgtggaaattggaatctagtgaaggatcaaaaatcttgattagtagagatgttacctttgatgagacatgtatgggaatgaagtgta 39485369  T
Q  354 aagatttagagacttta 370  Q
    ||||  |||||||||||    
T  39485368 aagacctagagacttta 39485352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 369 - 429
Target Start/End: Original strand, 22172654 - 22172714
Alignment:
Q  369 tatgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  22172654 tatgtaacgccctctttgaattatttgttttatttgattattttattgagtttagaatata 22172714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 24672280 - 24672225
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  24672280 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagt 24672225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 184 - 367
Target Start/End: Original strand, 31133863 - 31134046
Alignment:
Q  184 gcatatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatct 283  Q
    |||||||||| |||||||||||||  || ||| | |||||||| |||||||||||||||| ||  || || |  ||||||||||||||||||| ||||||    
T  31133863 gcatatcaagtaagacaagcttgatgctggagttgtgaaatgtttcttcattggttatccagagcgtgtgcacagttacaagttgtggaaattggaatct 31133962  T
Q  284 agtggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    |   |||||| || ||   |||| || | ||| ||||| ||||||||||| |||||| |||| ||||  |||||  ||||||||    
T  31133963 atatgaggatcaagagcgatgataagcaaggacgttacttttgatgagacccgtatgaggataaagttaaaagacctagagact 31134046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 369 - 429
Target Start/End: Original strand, 32213699 - 32213759
Alignment:
Q  369 tatgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| | |||||||| ||||    
T  32213699 tatgtaacgccctctttgaaatatttgatttatttgattgttttaataagtttagaatata 32213759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 422
Target Start/End: Original strand, 20320614 - 20320665
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  20320614 tgtaacgccctctttgaattatttgttttatttgattattttattgagttta 20320665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 422
Target Start/End: Original strand, 22611685 - 22611736
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  22611685 tgtaacgccctctttgaattatttgttttatttgattattttattgagttta 22611736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 23705894 - 23705949
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  23705894 tgtaacgccctctttgaattatttgttttatttgattattttattgagtatagagt 23705949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 23932886 - 23932835
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  23932886 tgtaacgccctctttgaattatttgttttatttgattattttattgagttta 23932835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 429
Target Start/End: Complemental strand, 26393702 - 26393643
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    ||||||| |||||||||||||||||||||||||||||| ||||| ||||| |||| ||||    
T  26393702 atgtaacgccctctttgaattatttgatttatttgattattttaatgagtctagaatata 26393643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 18357590 - 18357632
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  18357590 tgtaacgccctctttgaattatttgatttatttgattgtttta 18357632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 21246068 - 21246026
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  21246068 tgtaacgccctctttgaattatttgatttatttgattgtttta 21246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 17934538 - 17934584
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  17934538 agggatgttacttttgatgagacccgtatggggatgaagtgcaaaga 17934584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 413
Target Start/End: Complemental strand, 21916059 - 21916025
Alignment:
Q  379 cctctttgaattatttgatttatttgattgtttta 413  Q
    |||||||||||||||||||||||||||||||||||    
T  21916059 cctctttgaattatttgatttatttgattgtttta 21916025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 23134624 - 23134575
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  23134624 atgtaacgccctctttgaattatttgatttatttaattatttaattgagt 23134575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 34401393 - 34401442
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  34401393 atgtaacgccctctttgaattatttgatttatttaattatttaattgagt 34401442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 45026881 - 45026934
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  45026881 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 45026934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 23132156 - 23132108
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  23132156 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 23132108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 23136861 - 23136813
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  23136861 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 23136813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 26506670 - 26506622
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  26506670 tgtaacgccctctttgaattatttgatttatttcattatttaattgagt 26506622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 26509147 - 26509099
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  26509147 tgtaacgccctctttgaattatttgatttatttcattatttaattgagt 26509099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 27919635 - 27919683
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  27919635 tgtaacgccctctttgaattatttgatttatttcattatttaattgagt 27919683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 32038366 - 32038414
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  32038366 tgtaacaccctctttgaattatttgatttatttaattatttaattgagt 32038414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 39683610 - 39683562
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  39683610 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 39683562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 409
Target Start/End: Original strand, 12626011 - 12626050
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgt 409  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  12626011 atgtaacgcgctctttgaattatttgatttatttgattgt 12626050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 22106628 - 22106569
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgatt-gttttattgagtttagagtata 429  Q
    |||||| |||||||||||||||||| |||||||||||  ||||| |||||||||| ||||    
T  22106628 tgtaacgccctctttgaattatttgttttatttgattatttttaatgagtttagaatata 22106569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 2738659 - 2738705
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  2738659 agggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 2738705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 20052488 - 20052442
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  20052488 agggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 20052442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 22714961 - 22714915
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  22714961 agggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 22714915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 24528561 - 24528603
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||    
T  24528561 tgtaacgccctcttggaattatttgatttatttgattgattta 24528603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 413
Target Start/End: Complemental strand, 26904780 - 26904746
Alignment:
Q  379 cctctttgaattatttgatttatttgattgtttta 413  Q
    |||||||||||||||| ||||||||||||||||||    
T  26904780 cctctttgaattatttaatttatttgattgtttta 26904746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 39684701 - 39684747
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  39684701 agggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 39684747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 24941986 - 24941933
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    ||||||||||| ||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  24941986 tgtaaccccctttttgaattatttgttttatttaattatttaattgagtctaga 24941933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 18810237 - 18810189
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| |||||||    
T  18810237 tgtaacaccctctttgaattatttgttttatttaattatttaattgagt 18810189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 23710882 - 23710930
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  23710882 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 23710930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 24897070 - 24897118
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  24897070 tgtaacgccctctttgaattattagatttatttcattatttaattgagt 24897118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 24899553 - 24899601
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  24899553 tgtaacgccctctttgaattattagatttatttcattatttaattgagt 24899601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 24902030 - 24902078
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  24902030 tgtaacgccctctttgaattattagatttatttcattatttaattgagt 24902078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 24904507 - 24904555
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  24904507 tgtaacgccctctttgaattattagatttatttcattatttaattgagt 24904555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 24906982 - 24907030
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  24906982 tgtaacgccctctttgaattattagatttatttcattatttaattgagt 24907030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 98 - 370
Target Start/End: Complemental strand, 18411544 - 18411272
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||  ||||||||  ||||||||||||||||||||    
T  18411544 atagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcttctttgaaggtttttggagctttgacatatgcgcatatcaagcaag 18411445  T
Q  198 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaa 297  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| |||    
T  18411444 acaagcttgagcctagagctttgaaatgtgtcttcatttgttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatcaaa 18411345  T
Q  298 agtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  18411344 agtcttgattagtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagacttta 18411272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 98 - 367
Target Start/End: Original strand, 24263523 - 24263792
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  24263523 atagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagcaag 24263622  T
Q  198 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||     
T  24263623 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatcaag 24263722  T
Q  298 agtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    ||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||    
T  24263723 agtcttgataagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagact 24263792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 98 - 370
Target Start/End: Original strand, 9187345 - 9187617
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || ||||||||||||| | ||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  9187345 atagacttcaagacacctatggaggtatggagtgggaaaccggcaaactactcatctttgaaggtttttggagctttggcatatgcgcatatcaagcaag 9187444  T
Q  198 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||| |||    
T  9187445 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggttacaagctgtggaaattggaatctagtggaggatcaaa 9187544  T
Q  298 agtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||  |||||||||||    
T  9187545 agtcttgattagtatggatgttacctttgatgagacccgtatggggatgaagagtaaagacctagagacttta 9187617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 95 - 367
Target Start/End: Complemental strand, 16882817 - 16882545
Alignment:
Q  95 ggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagc 194  Q
    ||||||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  16882817 ggaatagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagc 16882718  T
Q  195 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| |||     
T  16882717 aagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggatacaagttgtggaaattggaatctagtggaagatc 16882618  T
Q  295 aaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    || ||||||||| ||||||||||||||||| |||||||| |  |||||||||||||||||||| |||||||||    
T  16882617 aagagtcttgataagtagggatgttaccttcgatgagacccagatggggatgaagtgtaaagacttagagact 16882545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 97 - 367
Target Start/End: Complemental strand, 21986808 - 21986538
Alignment:
Q  97 aatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaa 196  Q
    ||||||||||||||||| ||||||||||| || ||||||| ||||||| |||||||||||||||||||||  |||||||| |||||| ||||||||||||    
T  21986808 aatagacttcaagacacctatggaagtatggagtgggaaatcggcagactactcatctttgaaggttttcgaagctttggcatatgcacatatcaagcaa 21986709  T
Q  197 gacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaa 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||    
T  21986708 gacaagcttgagcctagagctttgaaatgtgtcttcattggttatctggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatcaa 21986609  T
Q  297 aagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
     ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||    
T  21986608 gagtcttgataagtagggatgttacctttgatgagactcggatggggatgaagtgtaaagacctagagact 21986538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 179 - 357
Target Start/End: Original strand, 24272181 - 24272359
Alignment:
Q  179 tatgcgcatatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattag 278  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  24272181 tatgcgcatatcaagcaagacaagattgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaagggttacaagttgtggaaattgg 24272280  T
Q  279 aatctagtggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24272281 aatctagttgaggattaaaagtcttgattagtagggatgttacctttgatgagacccgtatggggatgaagtgtaaaga 24272359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 21642449 - 21642302
Alignment:
Q  223 atgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaaagtcttgattagtagggatgttacc 322  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||    
T  21642449 atgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctattggaggatcaaaagtcttgattagtagggatgttacc 21642350  T
Q  323 tttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    || |||||||| ||||||||||||| |||||||||  |||||||||||    
T  21642349 ttcgatgagacccgtatggggatgatgtgtaaagacctagagacttta 21642302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 98 - 228
Target Start/End: Complemental strand, 21643924 - 21643794
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || |||||||||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  21643924 atagacttcaagacacctatggaggtatggagtgggaaaccggctgattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagcaag 21643825  T
Q  198 acaagcttgagcctagagctttgaaatgtgt 228  Q
    |||||||||||||||||||||||||||||||    
T  21643824 acaagcttgagcctagagctttgaaatgtgt 21643794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 17236005 - 17235950
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  17236005 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagt 17235950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 413
Target Start/End: Original strand, 15080876 - 15080922
Alignment:
Q  367 tttatgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  15080876 tttatgtaacgccctctttgaattatttgatttatttgattgtttta 15080922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 45846284 - 45846332
Alignment:
Q  378 ccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  45846284 ccctctttgaattatttgttttatttgattattttattgagtttagagt 45846332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 8472007 - 8471952
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  8472007 tgtaacgccctctttgaattatttgttttatttgattattttattgaatttagagt 8471952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 8941739 - 8941684
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| |||||||||||  |||||||||||||||||    
T  8941739 tgtaacaccctctttgaattatttgttttatttgattactttattgagtttagagt 8941684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 16549614 - 16549656
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  16549614 tgtaacgccctctttgaattatttgatttatttgattgtttta 16549656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 16616048 - 16616006
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  16616048 tgtaacgccctctttgaattatttgatttatttgattgtttta 16616006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 24275877 - 24275819
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| ||||||||||| |||||||||||||||||||||||| | |||||||| ||||    
T  24275877 tgtaacgccctctttgaaatatttgatttatttgattgttttaataagtttagaatata 24275819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 15375581 - 15375633
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    ||||||| |||||||||||||||||||||||||| ||| ||| ||||||||||    
T  15375581 atgtaacgccctctttgaattatttgatttattttattatttaattgagttta 15375633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 8469945 - 8469890
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| || ||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  8469945 tgtaacgccatctttgaattatttgttttatttgattattttattgaatttagagt 8469890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 12462986 - 12462931
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| ||||||  |||||||||| ||||||||||| ||||||||||||||||||    
T  12462986 tgtaacgccctctcggaattatttgttttatttgattattttattgagtttagagt 12462931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 413
Target Start/End: Complemental strand, 13898859 - 13898816
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||    
T  13898859 atgtaacgccctctttgaattatttaatttatttgattgtttta 13898816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 426
Target Start/End: Original strand, 14268592 - 14268639
Alignment:
Q  379 cctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  14268592 cctctttgaattatttgttttatttgattattttattaagtttagagt 14268639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 413
Target Start/End: Original strand, 9388316 - 9388350
Alignment:
Q  379 cctctttgaattatttgatttatttgattgtttta 413  Q
    |||||||||||||||||||||||||||||||||||    
T  9388316 cctctttgaattatttgatttatttgattgtttta 9388350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 13648659 - 13648617
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||| ||||||||||||||||||||||||||||    
T  13648659 tgtaacgccctcttggaattatttgatttatttgattgtttta 13648617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 15214940 - 15214898
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  15214940 tgtaacgccctctttgaattatttaatttatttgattgtttta 15214898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 29051790 - 29051832
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| | ||||||||||||||||||||||||||||||||||    
T  29051790 tgtaacgctctctttgaattatttgatttatttgattgtttta 29051832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 9944683 - 9944736
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  9944683 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 9944736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 13870641 - 13870592
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  13870641 atgtaacgccctctttgaattatttgatttatttaattatttaattgagt 13870592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 14317172 - 14317225
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  14317172 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 14317225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 14947987 - 14948036
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  14947987 atgtaacgccctctttgaattatttgatttatttaattatttaattgagt 14948036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 18431994 - 18431941
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  18431994 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 18431941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 457617 - 457569
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  457617 tgtaacaccctctttgaattatttgatttatttaattatttaattgagt 457569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 357
Target Start/End: Complemental strand, 3322736 - 3322469
Alignment:
Q  87 catcatcaggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgca 186  Q
    ||||| |||| |||||  ||||||||| |||||| || | || ||||| ||||||||| |||||    ||||| || ||| ||||||| |  | ||| ||    
T  3322736 catcaacagggatagatctcaagacacctatggaggtttggagtgggagaccggcagactactctaacttgaaagtcttcggagctttagcgtttgccca 3322637  T
Q  187 tatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagt 286  Q
    ||||| ||||||||| |||||  |||||||  |||| ||| | ||||| |||||||| |||||| |||| ||||| |   |||||||  | ||| ||       
T  3322636 tatcaggcaagacaaacttgatgctagagcggtgaagtgtattttcatgggttatcctgaaggtgtgaaaggttatagactgtggaagatggaacct--- 3322540  T
Q  287 ggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    |||| || |||| |  | || || ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  3322539 ggagaatcaaaatttattataagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 3322469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 16233817 - 16233769
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  16233817 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 16233769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 16411354 - 16411306
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  16411354 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 16411306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 20383992 - 20384040
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  20383992 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 20384040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 26354848 - 26354896
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  26354848 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 26354896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 26357300 - 26357348
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  26357300 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 26357348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 5294104 - 5294163
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgatt-gttttattgagtttagagtata 429  Q
    |||||| |||||||||||||||||| |||||||||||  ||||| |||||||||| ||||    
T  5294104 tgtaacgccctctttgaattatttgttttatttgattatttttaatgagtttagaatata 5294163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 5295277 - 5295336
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgatt-gttttattgagtttagagtata 429  Q
    |||||| |||||||||||||||||| |||||||||||  ||||| |||||||||| ||||    
T  5295277 tgtaacgccctctttgaattatttgttttatttgattatttttaatgagtttagaatata 5295336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 5296450 - 5296509
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgatt-gttttattgagtttagagtata 429  Q
    |||||| |||||||||||||||||| |||||||||||  ||||| |||||||||| ||||    
T  5296450 tgtaacgccctctttgaattatttgttttatttgattatttttaatgagtttagaatata 5296509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 405
Target Start/End: Original strand, 19485641 - 19485676
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttga 405  Q
    ||||||| ||||||||||||||||||||||||||||    
T  19485641 atgtaacgccctctttgaattatttgatttatttga 19485676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 44012258 - 44012212
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  44012258 agggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 44012212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 48744916 - 48744874
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||| | ||||||||||||||||    
T  48744916 tgtaacgccctctttgaattatttaaattatttgattgtttta 48744874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 3387858 - 3387805
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  3387858 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 3387805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 11392170 - 11392219
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  11392170 atgtaacaccctctttgaattattagatttatttaattatttaattgagt 11392219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 32126751 - 32126702
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  32126751 atgtaacgccctctttgaattattagatttatttaattatttaattgagt 32126702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 412
Target Start/End: Original strand, 37726541 - 37726574
Alignment:
Q  379 cctctttgaattatttgatttatttgattgtttt 412  Q
    |||||||||||||||| |||||||||||||||||    
T  37726541 cctctttgaattatttaatttatttgattgtttt 37726574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 41524205 - 41524168
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattg 408  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  41524205 tgtaacgccctctttgaattatttgatttatttaattg 41524168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 41526667 - 41526630
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattg 408  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  41526667 tgtaacgccctctttgaattatttgatttatttaattg 41526630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 10500275 - 10500331
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    ||||||| |||||||||||||||||| |||||||  || |||  |||||||||||||    
T  10500275 atgtaacgccctctttgaattatttgttttatttatttatttatttgagtttagagt 10500331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 10505304 - 10505360
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    ||||||| |||||||||||||||||| |||||||  || |||  |||||||||||||    
T  10505304 atgtaacgccctctttgaattatttgttttatttatttatttatttgagtttagagt 10505360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 411
Target Start/End: Complemental strand, 18628827 - 18628787
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttt 411  Q
    |||||| |||||||||||||||||| ||||||| |||||||    
T  18628827 tgtaacgccctctttgaattatttgttttatttaattgttt 18628787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 27218155 - 27218107
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  27218155 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 27218107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 98 - 367
Target Start/End: Original strand, 16509 - 16778
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  16509 atagacttcaagacacctatggaggtatggagtgggaaaccggcagattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagcaag 16608  T
Q  198 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||     
T  16609 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagtggaggatcaag 16708  T
Q  298 agtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    ||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||    
T  16709 agtcttgataagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagact 16778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 1e-73; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 98 - 367
Target Start/End: Complemental strand, 41396126 - 41395869
Alignment:
Q  98 atagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaag 197  Q
    |||||||||||||||| |||||| |||| || ||||||||| ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  41396126 atagacttcaagacacctatggaggtatggagtgggaaacccgcagattactcctctttgaaggttttcggagctttggcatatgcgcatatcaagcaag 41396027  T
Q  198 acaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaa 297  Q
    |||||||             | ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||| ||     
T  41396026 acaagctg------------tggaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattggaatctagttgaggatcaag 41395939  T
Q  298 agtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagact 367  Q
    ||||||  |||||||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||    
T  41395938 agtcttagttagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagact 41395869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 214 - 370
Target Start/End: Original strand, 19369001 - 19369157
Alignment:
Q  214 agctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagtggaggatgaaaagtcttgattagtagg 313  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19369001 agctttgaaatgtgtcttcattggttatccggaaggtgtgaaggggtacaagttgtggaaattagaatctagtggaggatcaaaagtcttgattagtagg 19369100  T
Q  314 gatgttacctttgatgagactcgtatggggatgaagtgtaaagatttagagacttta 370  Q
    |||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||    
T  19369101 gatgttacctttgatgagacccgtatggggattaagtgtaaagacctagagacttta 19369157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 43543978 - 43543923
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  43543978 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagt 43543923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 20943762 - 20943817
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  20943762 tgtaacgccctctttgaattatttgttttatttgattattttattgaggttagagt 20943817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 34771076 - 34771021
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| || ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  34771076 tgtaacgccttctttgaattatttgttttatttgattattttattgagtttagagt 34771021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 37525007 - 37524952
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  37525007 tgtaacgccctctttgaactatttgttttatttgattattttattgagtttagagt 37524952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 13880175 - 13880233
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| ||||||| |||||||||||||||||||||||||||| |  ||||||||||||    
T  13880175 tgtaacgccctcttcgaattatttgatttatttgattgttttaataggtttagagtata 13880233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 23089554 - 23089513
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttt 412  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  23089554 tgtaacgccctctttgaattatttgatttatttgattgtttt 23089513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 357
Target Start/End: Original strand, 9523961 - 9524228
Alignment:
Q  87 catcatcaggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgca 186  Q
    ||||| |||| |||||  ||||||||| |||||| || | || ||||| ||||||||| |||||    ||||| || ||| ||||||| |  | ||| ||    
T  9523961 catcaacagggatagatctcaagacacctatggaggtttggagtgggagaccggcagactactctaacttgaaagtcttcggagctttagcgtttgccca 9524060  T
Q  187 tatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagt 286  Q
    | ||| ||||||||| |||||  |||||||| |||| ||| | ||||| |||||||| |||||| |||| ||||| |   |||||||  | ||| ||       
T  9524061 tgtcaggcaagacaaacttgatgctagagctgtgaagtgtattttcatgggttatcctgaaggtgtgaaaggttatagactgtggaagatggaacct--- 9524157  T
Q  287 ggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||| |||| |  | || || ||||||||||| ||||||||||| || |||||||||||||| |||||    
T  9524158 ggaggatcaaaatttattataagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 9524228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 21506638 - 21506582
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||||  ||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  21506638 atgtaacgtcctctttgaattatttgttttattttattattttattgagtttagagt 21506582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 42314334 - 42314386
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||    
T  42314334 atgtaacgccctctttgaattatttgttttatttgattattttatttagttta 42314386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 411
Target Start/End: Complemental strand, 50001916 - 50001876
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttt 411  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  50001916 tgtaacgccctctttgaattatttgatttatttgattgttt 50001876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 419
Target Start/End: Complemental strand, 29777923 - 29777872
Alignment:
Q  368 ttatgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  29777923 ttatgtaacgccctctttgaattatttgatttatttaattatttaattgagt 29777872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 413
Target Start/End: Original strand, 45573693 - 45573736
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||    
T  45573693 atgtaacaccctcttggaattatttgatttatttgattgtttta 45573736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 434251 - 434209
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  434251 tgtaacaccctctttgaattatttgttttatttgattgtttta 434209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 21660749 - 21660707
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  21660749 tgtaacgccctctttgaattatttaatttatttgattgtttta 21660707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 16274228 - 16274281
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||||||||||| ||| ||| ||||||| ||||    
T  16274228 tgtaacgccctctttgaattatttgatttatttaattatttaattgagtctaga 16274281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 21473952 - 21474001
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  21473952 atgtaacgccctctttgaattatttgatttatttaattatttaattgagt 21474001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 368 - 413
Target Start/End: Original strand, 46194028 - 46194073
Alignment:
Q  368 ttatgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||||||  ||| |||||||||||||||||||||||||||||||    
T  46194028 ttatgtaacgtcctatttgaattatttgatttatttgattgtttta 46194073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 357
Target Start/End: Complemental strand, 2397135 - 2396936
Alignment:
Q  155 ttgaaggttttcagagctttggaatatgcgcatatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatga 254  Q
    ||||| |||||| ||||||| | || ||| ||| ||||||| ||||| |||||  |||||||| |||| ||| | ||||| |||||||| ||| || |||    
T  2397135 ttgaaagttttcggagctttagcatttgctcatgtcaagcaggacaaacttgatgctagagctgtgaagtgtattttcatgggttatcctgaaagtgtga 2397036  T
Q  255 agggttacaagttgtggaaattagaatctagtggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaa 354  Q
    | ||||| |   |||||||  | ||| ||   ||||||| |||| |  | || || ||||||||||| ||||||||||| || |||||||||||||| ||    
T  2397035 aaggttatagactgtggaagatggaacct---ggaggatcaaaatttattataagcagggatgttacttttgatgagacccgcatggggatgaagtgcaa 2396939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 9044172 - 9044220
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  9044172 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 9044220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 12945667 - 12945619
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  12945667 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 12945619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 16363213 - 16363165
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  16363213 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 16363165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 21737625 - 21737669
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttatt 415  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||    
T  21737625 tgtaacaccctctttgaattatttgttttatttgattattttatt 21737669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 21842065 - 21842017
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  21842065 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 21842017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 16402320 - 16402269
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    |||||| |||| ||||||||||||| ||||||||||| ||||| ||||||||    
T  16402320 tgtaacgccctgtttgaattatttgttttatttgattattttaatgagttta 16402269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 430
Target Start/End: Complemental strand, 46560580 - 46560522
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtatac 430  Q
    |||||| ||||||||||||||||| | |||||||||| ||||| |||||||||| |||||    
T  46560580 tgtaacgccctctttgaattattt-aattatttgattattttaatgagtttagaatatac 46560522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 413
Target Start/End: Complemental strand, 48522162 - 48522119
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||| | |||||| |||||||||||||||||||||||||||    
T  48522162 atgtaacactctctttcaattatttgatttatttgattgtttta 48522119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 430
Target Start/End: Complemental strand, 51084470 - 51084412
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtatac 430  Q
    |||||| ||||||||||||||||| | |||||||||| ||||| |||||||||| |||||    
T  51084470 tgtaacaccctctttgaattattt-aattatttgattattttaatgagtttagaatatac 51084412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 13211847 - 13211897
Alignment:
Q  369 tatgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||||| |||| ||||||||||||||||||||| ||| ||| |||||||    
T  13211847 tatgtaacgccctttttgaattatttgatttatttaattatttaattgagt 13211897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 29763243 - 29763285
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| || ||||| |||||||||||||||||||||||||||    
T  29763243 tgtaacgccatctttaaattatttgatttatttgattgtttta 29763285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 49262398 - 49262340
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| ||||||||||| |||||| |||| |||||| ||||| |||||||||| ||||    
T  49262398 tgtaacgccctctttgaaatatttgttttagttgattattttaatgagtttagaatata 49262340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 1573585 - 1573638
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  1573585 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 1573638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 10827975 - 10827934
Alignment:
Q  378 ccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||||||||||||||||||||||| ||| ||| |||||||    
T  10827975 ccctctttgaattatttgatttatttaattatttaattgagt 10827934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 12759279 - 12759226
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  12759279 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 12759226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 13990159 - 13990106
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  13990159 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 13990106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 403
Target Start/End: Complemental strand, 48444795 - 48444762
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttattt 403  Q
    ||||||| ||||||||||||||||||||||||||    
T  48444795 atgtaacgccctctttgaattatttgatttattt 48444762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 430
Target Start/End: Original strand, 14235668 - 14235725
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtatac 430  Q
    |||||| ||||||||||||||||  | |||||||||| ||||| |||||||||| |||||    
T  14235668 tgtaacgccctctttgaattatt--aattatttgattattttaatgagtttagaatatac 14235725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 21922158 - 21922206
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  21922158 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 21922206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 29299542 - 29299486
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    ||||||| |||||||||||||||||| |||||||  || |||  |||||||||||||    
T  29299542 atgtaacgccctctttgaattatttgttttatttatttatttatttgagtttagagt 29299486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 50799598 - 50799646
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  50799598 tgtaacgccctctttgaattattagatttatttcattatttaattgagt 50799646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 146 - 290
Target Start/End: Complemental strand, 34849 - 34705
Alignment:
Q  146 tactcatctttgaaggttttcagagctttggaatatgcgcatatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccgg 245  Q
    ||||||||| |||||||| ||  || ||||| |||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||    
T  34849 tactcatctatgaaggttctctaagatttggcatatgcgcatatcaagcaagacaagcttaaggctagagctgtgaaatgtgtcttcattggttatccgg 34750  T
Q  246 aaggtatgaagggttacaagttgtggaaattagaatctagtggag 290  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||||    
T  34749 aaggtgtgaagggttacaagttgtggaaattggaatctggtggag 34705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 776 - 832
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  776 atgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagt 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 1425 - 1480
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  1425 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagt 1480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 6413 - 6468
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  6413 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagt 6468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 30134 - 30189
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  30134 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagt 30189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 60964 - 60909
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||| ||||  ||||||||||| ||||||||||||||||||    
T  60964 tgtaacgccctctttgaatcatttattttatttgattattttattgagtttagagt 60909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 107834 - 107779
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  107834 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagt 107779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 116335 - 116280
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  116335 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagt 116280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 387286 - 387341
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  387286 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagt 387341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 24295 - 24237
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| |||||||||||||||||||||||||||||||||||| | |||||||| ||||    
T  24295 tgtaacaccctctttgaattatttgatttatttgattgttttaataagtttagaatata 24237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 426
Target Start/End: Original strand, 23576 - 23629
Alignment:
Q  373 taaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  23576 taacgccctctttgaattatttgttttatttgattattttattgagtttagagt 23629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 23945 - 23890
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  23945 tgtaacaccctctttgaattatttgttttatttgattatattattgagtttagagt 23890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 426
Target Start/End: Complemental strand, 21116 - 21063
Alignment:
Q  373 taaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21116 taacgccctctttgaattatttgttttatttgattattttattgagtttagagt 21063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 426
Target Start/End: Complemental strand, 12943 - 12890
Alignment:
Q  373 taaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  12943 taacgccctctttgaattatttgttttatttgattattttattgagtttagagt 12890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 12574 - 12629
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  12574 tgtaacaccctctttgaattatttgttttatttgattatattattgagtttagagt 12629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 272 - 216
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    ||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  272 atgtaacgccctctttgaattatttattttatttgattattttattgagtttagagt 216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 426
Target Start/End: Original strand, 46128 - 46175
Alignment:
Q  379 cctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  46128 cctctttgaattatttgttttatttgattattttattgagtttagagt 46175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 45649 - 45691
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| | |||||||| |||||||||||||||||||||||||    
T  45649 tgtaacgctctctttgagttatttgatttatttgattgtttta 45691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 153070 - 153015
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| | |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  153070 tgtaacgctctctttgaattatttgttttatttgattattttattgagtttagagt 153015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 159751 - 159803
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttag 423  Q
    |||||| ||||||||||||||||||||||||||||||| |||| | |||||||    
T  159751 tgtaacgccctctttgaattatttgatttatttgattggtttaataagtttag 159803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 66 - 18
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  66 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 18  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 1610 - 1568
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  1610 tgtaacgccctctttgaattatttgatttatttgattgtttta 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 263 - 210
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  263 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 1819 - 1861
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  1819 tgtaacgccctctttgaattatttgatttatttgattgtttta 1861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 413
Target Start/End: Complemental strand, 6753 - 6709
Alignment:
Q  369 tatgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||    
T  6753 tatgtaacgccctctttgaattatttgagttatttgattgtttta 6709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 13423 - 13381
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  13423 tgtaacgccctctttgaattatttgatttatttgattgtttta 13381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 22333 - 22391
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| |||||||||||||||||| ||||||||||| ||||| |||||||||| ||||    
T  22333 tgtaacaccctctttgaattatttgttttatttgattattttaatgagtttagaatata 22391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 15242 - 15193
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  15242 atgtaacgccctctttgaattatttgatttatttaattatttaattgagt 15193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 17053 - 17011
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  17053 tgtaacgccctctttgaattatttgatttatttgattgtttta 17011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 11241 - 11183
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtat 428  Q
    ||||||| |||||||||||||||||  ||||||| ||| ||||||||||||||||||||    
T  11241 atgtaacgccctctttgaattatttattttatttaattattttattgagtttagagtat 11183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 15339 - 15297
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  15339 tgtaacgccctctttgaattatttgatttatttgattgtttta 15297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 17359 - 17317
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  17359 tgtaacgccctctttgaattatttgatttatttgattgtttta 17317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 2379 - 2337
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  2379 tgtaacgccctctttgaattatttgatttatttgattgtttta 2337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 368 - 413
Target Start/End: Complemental strand, 42673 - 42628
Alignment:
Q  368 ttatgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||||    
T  42673 ttatgtaacgccctctaggaattatttgatttatttgattgtttta 42628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 69282 - 69324
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  69282 tgtaacgccctctttgaattatttgatttatttgattgtttta 69324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 28825 - 28867
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  28825 tgtaacgccctctttgaattatttgatttatttgattgtttta 28867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 424
Target Start/End: Complemental strand, 11361 - 11316
Alignment:
Q  379 cctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||    
T  11361 cctctttgaattatttgttttatttgattattttattgagtttaga 11316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 1961 - 1913
Alignment:
Q  378 ccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  1961 ccctctttgaattatttgttttatttgattcttttatcgagtttagagt 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 5931 - 5987
Alignment:
Q  373 taaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||| |||||||||||||||| ||||||||||||||||||| | |||||||| ||||    
T  5931 taacgccctctttgaattattcgatttatttgattgttttaataagtttagaatata 5987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 413
Target Start/End: Complemental strand, 5619 - 5585
Alignment:
Q  379 cctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||||||||||| |||||||||||||||||||    
T  5619 cctctttgaattattagatttatttgattgtttta 5585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 5928 - 5980
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttag 423  Q
    |||||| |||||||||||||||||| |||| |||||| |||||||||||||||    
T  5928 tgtaacgccctctttgaattatttgttttacttgattattttattgagtttag 5980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 5941 - 5997
Alignment:
Q  373 taaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||| |||||||||||||||| ||||||||||||||||||| | |||||||| ||||    
T  5941 taacgccctctttgaattattcgatttatttgattgttttaataagtttagaatata 5997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 10331 - 10383
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttag 423  Q
    |||||| |||||||||||||||||| |||| |||||| |||||||||||||||    
T  10331 tgtaacgccctctttgaattatttgttttacttgattattttattgagtttag 10383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 413
Target Start/End: Complemental strand, 5629 - 5595
Alignment:
Q  379 cctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||||||||||| |||||||||||||||||||    
T  5629 cctctttgaattattagatttatttgattgtttta 5595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 1203 - 1152
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    |||||| |||||||||||||||||||||||||| ||| ||| ||||||||||    
T  1203 tgtaacgccctctttgaattatttgatttatttaattatttaattgagttta 1152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 413
Target Start/End: Original strand, 9530 - 9573
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||    
T  9530 atgtaacgccctcttggaattatttgatttatttgattgtttta 9573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 418
Target Start/End: Original strand, 9299 - 9346
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgag 418  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  9299 tgtaacgccctctttgaattatttgttttatttgattattttattgag 9346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 19646 - 19701
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| |||||||| || ||||||||| ||||||||    
T  19646 tgtaacgccctctttgaattatttgttttatttggttattttattgaatttagagt 19701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 28325 - 28380
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||| |||||||| || ||||||||| ||||||||    
T  28325 tgtaacgccctctttgaattatttgttttatttggttattttattgaatttagagt 28380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 1453 - 1395
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| |||| ||||||||||||| ||||||||||| ||||| |||||||||| ||||    
T  1453 tgtaacgccctttttgaattatttgttttatttgattattttaatgagtttagaatata 1395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 6093 - 6051
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||| ||||||||||    
T  6093 tgtaacgccctctttgaattatttgatttattcgattgtttta 6051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 4278 - 4236
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  4278 tgtaacgccctctttgaattatttgatttatttgatggtttta 4236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 5084 - 5134
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagttt 421  Q
    |||||| |||||||||||||||||| ||||||| ||||||| |||||||||    
T  5084 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagttt 5134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 1443 - 1401
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  1443 tgtaacgccctctttgaattatttgatttatttgatagtttta 1401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 944 - 902
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  944 tgtaacgccctctttgaattatttgatttatttgattgattta 902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 10539 - 10497
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||    
T  10539 tgtaacgccctctttgaattatttaatttattagattgtttta 10497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 33489 - 33539
Alignment:
Q  369 tatgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  33489 tatgtaacgccctctttgaattatttgatttatttaattatttaattgagt 33539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 52591 - 52549
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  52591 tgtaacgccctctttgaattatttaatttatttgattgtttta 52549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 12947 - 12894
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||||||||||| ||| ||| ||||||| ||||    
T  12947 tgtaacgccctctttgaattatttgatttatttaattatttaattgagtctaga 12894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 6872 - 6819
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||||||||    
T  6872 tgtaacaccctctttgaattatttgttttatttaattatttaattgagtttaga 6819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 407
Target Start/End: Complemental strand, 9403 - 9367
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgatt 407  Q
    |||||| ||||||||||||||||||||||||||||||    
T  9403 tgtaacgccctctttgaattatttgatttatttgatt 9367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 407
Target Start/End: Complemental strand, 13538 - 13502
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgatt 407  Q
    |||||| ||||||||||||||||||||||||||||||    
T  13538 tgtaacgccctctttgaattatttgatttatttgatt 13502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 10540 - 10492
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  10540 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 10492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 429
Target Start/End: Complemental strand, 22030 - 21970
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgatt-gttttattgagtttagagtata 429  Q
    ||||||| |||||||||||||||||| |||||||||||  ||||| |||||||||| ||||    
T  22030 atgtaacgccctctttgaattatttgttttatttgattatttttaatgagtttagaatata 21970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 19558 - 19521
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattg 408  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  19558 tgtaacgccctctttgaattatttgatttatttaattg 19521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 357
Target Start/End: Complemental strand, 1092 - 825
Alignment:
Q  87 catcatcaggaatagacttcaagacacatatggaagtatagaatgggaaaccggcagattactcatctttgaaggttttcagagctttggaatatgcgca 186  Q
    ||||| |||| |||||  ||||||||| |||||| || | || ||||| ||||| ||| |||||    ||||| |||||| ||||||| |  | ||| ||    
T  1092 catcaacagggatagatctcaagacacctatggaggtttggagtgggagaccggtagactactctaacttgaaagttttcggagctttagcgtttgccca 993  T
Q  187 tatcaagcaagacaagcttgagcctagagctttgaaatgtgtcttcattggttatccggaaggtatgaagggttacaagttgtggaaattagaatctagt 286  Q
    | | | ||||||||| |||||  |||||||| | |||||| | ||||| |||||||| |||||| |||| |||||||   |||||||  | ||| ||       
T  992 tgttaggcaagacaaacttgatgctagagctgtaaaatgtattttcatgggttatcctgaaggtgtgaaaggttacagactgtggaagatggaacct--- 896  T
Q  287 ggaggatgaaaagtcttgattagtagggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    ||||||| |||| |  | || || | ||||||||| ||||||||||| || |||||||||||||| |||||    
T  895 ggaggatcaaaatttattataagcaaggatgttacttttgatgagacccgcatggggatgaagtgcaaaga 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 29287 - 29235
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    ||||||| ||||||| |||||||||||||||||| ||| ||| ||||||||||    
T  29287 atgtaacgccctcttggaattatttgatttatttaattatttaattgagttta 29235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 31189 - 31130
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtatac 430  Q
    ||||||| ||||||||||||||||| | |||||||||| ||||| |||||||||| |||||    
T  31189 atgtaacgccctctttgaattattt-aattatttgattattttaatgagtttagaatatac 31130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 9749 - 9803
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagt 426  Q
    |||||| |||||||||||||||||  ||||||| ||| ||||||||||||||||||    
T  9749 tgtaacgccctctttgaattatttattttattt-attattttattgagtttagagt 9803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 422
Target Start/End: Complemental strand, 8504 - 8453
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    |||||| |||| |||||||||||| |||||||||||| ||||| ||||||||    
T  8504 tgtaacgccctttttgaattatttaatttatttgattattttaatgagttta 8453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 422
Target Start/End: Original strand, 4803 - 4854
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagttta 422  Q
    |||||| |||| |||||||||||| |||||||||||| ||||| ||||||||    
T  4803 tgtaacgccctttttgaattatttaatttatttgattattttaatgagttta 4854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1139 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1139
Description:

Target: scaffold1139; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 2504 - 2554
Alignment:
Q  369 tatgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||||| |||||||| ||||||||||||||||| ||| ||| |||||||    
T  2504 tatgtaacgccctctttaaattatttgatttatttaattatttaattgagt 2554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 1232 - 1290
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttagagtata 429  Q
    |||||| ||||||||||| |||||| |||  |||||| |||||||||||||||| ||||    
T  1232 tgtaacgccctctttgaaatatttgttttggttgattattttattgagtttagaatata 1290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 424
Target Start/End: Complemental strand, 7240 - 7186
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    ||||||| |||||||||||||||||| ||| ||| ||||||| ||||||| ||||    
T  7240 atgtaacgccctctttgaattatttgttttgtttaattgtttaattgagtctaga 7186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0538 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0538
Description:

Target: scaffold0538; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 424
Target Start/End: Complemental strand, 8154 - 8100
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    ||||||| |||||||||||||||||| ||||||| || |||| ||||||| ||||    
T  8154 atgtaacgccctctttgaattatttgttttatttaatcgtttaattgagtctaga 8100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 2526 - 2568
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttta 413  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||    
T  2526 tgtaacgccctcattgaattatttgatttatttgatggtttta 2568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 18780 - 18826
Alignment:
Q  311 agggatgttacctttgatgagactcgtatggggatgaagtgtaaaga 357  Q
    |||||||| || ||||||||||| ||||||||||||||||| |||||    
T  18780 agggatgtcacttttgatgagacccgtatggggatgaagtgcaaaga 18826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 403
Target Start/End: Original strand, 40692 - 40726
Alignment:
Q  369 tatgtaaccccctctttgaattatttgatttattt 403  Q
    |||||||| ||||||||||||||||||||||||||    
T  40692 tatgtaacgccctctttgaattatttgatttattt 40726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 38602 - 38650
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||||  ||||||| ||||||| |||||||    
T  38602 tgtaacgccctctttgaattatttattttatttaattgtttaattgagt 38650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 31; Significance: 0.00000005; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 424
Target Start/End: Complemental strand, 137973 - 137919
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    ||||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  137973 atgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 137919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 424
Target Start/End: Complemental strand, 142911 - 142857
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    ||||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  142911 atgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 142857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 135503 - 135450
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  135503 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 135450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 140441 - 140388
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  140441 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 140388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 145379 - 145326
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  145379 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 145326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1311 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1311
Description:

Target: scaffold1311; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 219 - 170
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||||| ||||||| ||| ||| |||||||    
T  219 atgtaacaccctctttgaattatttgttttatttaattttttaattgagt 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 16901 - 16954
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  16901 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 16954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 3987 - 3946
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttt 412  Q
    |||||| |||||||||||||||||| ||||||||||| ||||    
T  3987 tgtaacgccctctttgaattatttgttttatttgattatttt 3946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 18019 - 17978
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttt 412  Q
    |||||| |||||||||||||||||| ||||||||||| ||||    
T  18019 tgtaacgccctctttgaattatttgttttatttgattatttt 17978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 37819 - 37872
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||||||||||| ||| ||| ||| ||| ||||    
T  37819 tgtaacgccctctttgaattatttgatttatttaattatttaattcagtctaga 37872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 83378 - 83337
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgtttt 412  Q
    |||||| |||||||||||||||||| ||||||||||| ||||    
T  83378 tgtaacgccctctttgaattatttgttttatttgattatttt 83337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 55878 - 55931
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| |||||||||||||||||| ||||||| ||| ||| ||||||| ||||    
T  55878 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 55931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 117847 - 117798
Alignment:
Q  370 atgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||| |||||||||||||||||| ||||||| ||| ||| |||||||    
T  117847 atgtaacgccctctttgaattatttgttttatttaattttttaattgagt 117798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 1114 - 1061
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagtttaga 424  Q
    |||||| ||| ||||||||||||||  ||| |||||| ||||||||||||||||    
T  1114 tgtaacgcccactttgaattatttgtattacttgattattttattgagtttaga 1061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 8546 - 8594
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  8546 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 8594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 2883 - 2931
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  2883 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 2931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 414 - 366
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  414 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 876 - 828
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  876 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 4156 - 4116
Alignment:
Q  379 cctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||||||||||||||||||||| ||| ||| |||||||    
T  4156 cctctttgaattatttgatttatttaattatttaattgagt 4116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 2105 - 2153
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||| ||||||||||||||| ||| ||| |||||||    
T  2105 tgtaacgccctctttgagttatttgatttatttaattatttaattgagt 2153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 66 - 18
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  66 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 18  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 2573 - 2621
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  2573 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 2621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 39107 - 39067
Alignment:
Q  379 cctctttgaattatttgatttatttgattgttttattgagt 419  Q
    ||||||||||||||||||||||||| ||| ||| |||||||    
T  39107 cctctttgaattatttgatttatttaattatttaattgagt 39067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 13417 - 13369
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  13417 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 13369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 119 - 71
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  119 tgtaacgccctctttgaattattagatttatttcattatttaattgagt 71  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 41692 - 41644
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  41692 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 41644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 95704 - 95656
Alignment:
Q  371 tgtaaccccctctttgaattatttgatttatttgattgttttattgagt 419  Q
    |||||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  95704 tgtaacgccctctttgaattattagatttatttaattatttaattgagt 95656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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