View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0886_low_44 (Length: 263)

Name: NF0886_low_44
Description: NF0886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0886_low_44
NF0886_low_44
[»] scaffold0284 (1 HSPs)
scaffold0284 (5-174)||(2253-2422)
[»] chr4 (4 HSPs)
chr4 (1-175)||(6552634-6552808)
chr4 (1-175)||(6553034-6553208)
chr4 (1-175)||(312808-312992)
chr4 (55-107)||(6561023-6561075)
[»] chr2 (3 HSPs)
chr2 (5-175)||(31967253-31967423)
chr2 (57-96)||(36727631-36727670)
chr2 (70-110)||(36720129-36720169)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-175)||(35138-35312)
[»] chr8 (3 HSPs)
chr8 (1-175)||(36754452-36754626)
chr8 (1-175)||(41528425-41528599)
chr8 (78-136)||(43216917-43216975)
[»] chr1 (4 HSPs)
chr1 (1-175)||(45919635-45919809)
chr1 (1-175)||(49880276-49880452)
chr1 (64-136)||(16853665-16853737)
chr1 (55-136)||(31088746-31088829)
[»] chr3 (2 HSPs)
chr3 (3-170)||(50239968-50240138)
chr3 (78-145)||(14249223-14249290)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-175)||(19869-20043)
[»] chr5 (1 HSPs)
chr5 (1-171)||(9023465-9023635)
[»] scaffold0216 (1 HSPs)
scaffold0216 (55-107)||(29157-29209)
[»] scaffold0074 (1 HSPs)
scaffold0074 (57-136)||(32751-32829)
[»] scaffold0191 (1 HSPs)
scaffold0191 (78-136)||(11645-11703)
[»] chr7 (1 HSPs)
chr7 (57-111)||(2929478-2929532)
[»] chr6 (1 HSPs)
chr6 (1-50)||(6525067-6525116)


Alignment Details
Target: scaffold0284 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 2422 - 2253
Alignment:
Q  5 attgatggactattttagcctgacatgtatccaatgtctcgatctgtccgtggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatata 104  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2422 attgatggactattttagcctcacatgtatccaatgtctagatctgtccctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatata 2323  T
Q  105 cctaatacactaagattttcgatgatgatgtgctatcaattgtacgattaaccttaacataatgtgatga 174  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  2322 cctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttaacataatgtgatga 2253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 8e-73; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 6552634 - 6552808
Alignment:
Q  1 atacattgatggactattttagcctgacatgtatccaatgtctcgatctgtccgtggatgcaaaagtaaatgttaagaaacatataagtgagatgatcga 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||    
T  6552634 atacattgatggactattttagcctcacatgtatccaatgtctagatctgtccctggatgcaaaagtaaatgttaaaaaacgtataagtgagatgatcga 6552733  T
Q  101 tatacctaatacactaagattttcgatgatgatgtgctatcaattgtacgattaaccttaacataatgtgatgat 175  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  6552734 tatacctaatacactaagattttggatgatgatgtgttgtcaattgtatgattaaccttaacataatgtgatgat 6552808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 6553034 - 6553208
Alignment:
Q  1 atacattgatggactattttagcctgacatgtatccaatgtctcgatctgtccgtggatgcaaaagtaaatgttaagaaacatataagtgagatgatcga 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  6553034 atacattgatggactattttagcctcacatgtatccaatgtctagatctgtccctagatgcaaaagtaaatgttaagaaacatataagtgagatgatcga 6553133  T
Q  101 tatacctaatacactaagattttcgatgatgatgtgctatcaattgtacgattaaccttaacataatgtgatgat 175  Q
    ||||||||||| ||||||||||| ||||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  6553134 tatacctaatagactaagattttggatgatggtgtgctgtcaattgtatgattaaccttaacataatgtgatgat 6553208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 312808 - 312992
Alignment:
Q  1 atacattgatggactattttagcctgacatgtatccaatgtc----------tcgatctgtccgtggatgcaaaagtaaatgttaagaaacatataagtg 90  Q
    ||||||||||||||||||||||||| ||||||||||||||||          |||||||||| |||||||||||||||||||||||||||||||||||||    
T  312808 atacattgatggactattttagcctcacatgtatccaatgtctcgatctgtctcgatctgtctgtggatgcaaaagtaaatgttaagaaacatataagtg 312907  T
Q  91 agatgatcgatatacctaatacactaagattttcgatgatgatgtgctatcaattgtacgattaaccttaacataatgtgatgat 175  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  312908 agatgatcgatatacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttaacataatgtgatgat 312992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 6561023 - 6561075
Alignment:
Q  55 tggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatatacct 107  Q
    ||||| |||||||| |||||||  |||||||||||||||||| | ||||||||    
T  6561023 tggatacaaaagtagatgttaaacaacatataagtgagatgaccaatatacct 6561075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 8e-73; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 31967423 - 31967253
Alignment:
Q  5 attgatggactattttagcctgacatgtatccaatgtctcgatctgtccgtggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatata 104  Q
    |||||||||||| |||||||| ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31967423 attgatggactactttagcctcacatgtatccaatgtctagatttgtccctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatata 31967324  T
Q  105 cctaatacactaagattttcgatgatgatgtgctatcaattgtacgattaaccttaacataatgtgatgat 175  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  31967323 cctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttaacataatgtgatgat 31967253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 96
Target Start/End: Complemental strand, 36727670 - 36727631
Alignment:
Q  57 gatgcaaaagtaaatgttaagaaacatataagtgagatga 96  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  36727670 gatgcaaaagtagatgttaagaaacatatatgtgagatga 36727631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 36720129 - 36720169
Alignment:
Q  70 atgttaagaaacatataagtgagatgatcgatatacctaat 110  Q
    ||||| || |||||||||||||||||||| |||||||||||    
T  36720129 atgttgagcaacatataagtgagatgatccatatacctaat 36720169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 35138 - 35312
Alignment:
Q  1 atacattgatggactattttagcctgacatgtatccaatgtctcgatctgtccgtggatgcaaaagtaaatgttaagaaacatataagtgagatgatcga 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  35138 atacattgatggactattttagcctcacatgtatccaatgtctagatttgtccctggatgcaaaagtaaatgttaagaaacatataagttagatgatcga 35237  T
Q  101 tatacctaatacactaagattttcgatgatgatgtgctatcaattgtacgattaaccttaacataatgtgatgat 175  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||||||| ||||||||||||||||| ||||||||    
T  35238 tatacctaatacactaagattttggatgatgttgtgctgtcaattgtatgattaaccttaacataaagtgatgat 35312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 36754626 - 36754452
Alignment:
Q  1 atacattgatggactattttagcctgacatgtatccaatgtctcgatctgtccgtggatgcaaaagtaaatgttaagaaacatataagtgagatgatcga 100  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36754626 atacattgatggactatcttagcctcacatgtatccaatgtctagatctatccctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcga 36754527  T
Q  101 tatacctaatacactaagattttcgatgatgatgtgctatcaattgtacgattaaccttaacataatgtgatgat 175  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||| ||| ||||||||||||||||||||||||||    
T  36754526 tatacctaatacactaagattttggatgatgatctgctgtcaatagtatgattaaccttaacataatgtgatgat 36754452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 41528599 - 41528425
Alignment:
Q  1 atacattgatggactattttagcctgacatgtatccaatgtctcgatctgtccgtggatgcaaaagtaaatgttaagaaacatataagtgagatgatcga 100  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41528599 atacattgatgtactattttagcctcacatgtatccaatgtctagatatgtccctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcga 41528500  T
Q  101 tatacctaatacactaagattttcgatgatgatgtgctatcaattgtacgattaaccttaacataatgtgatgat 175  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||  |||||||    
T  41528499 tatacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttaacataacatgatgat 41528425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 43216975 - 43216917
Alignment:
Q  78 aaacatataagtgagatgatcgatatacctaatacactaagattttcgatgatgatgtg 136  Q
    ||||||||||||||||||||| |||||| |||| |  ||||||||| | ||||||||||    
T  43216975 aaacatataagtgagatgatcaatatacataatgctttaagattttgggtgatgatgtg 43216917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 5e-68; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 45919809 - 45919635
Alignment:
Q  1 atacattgatggactattttagcctgacatgtatccaatgtctcgatctgtccgtggatgcaaaagtaaatgttaagaaacatataagtgagatgatcga 100  Q
    |||||||| ||||||||||||| || ||||||||||||||||| |||| |||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  45919809 atacattggtggactattttagtctcacatgtatccaatgtctagatccgtccctggatgcaaaagtaaatgttaagaaatatataagtgagatgatcga 45919710  T
Q  101 tatacctaatacactaagattttcgatgatgatgtgctatcaattgtacgattaaccttaacataatgtgatgat 175  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  45919709 tatacctaatacactaagattttggatgatgatgtgttgtcaattgtatgattaaccttaacataatgtgatgat 45919635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 49880276 - 49880452
Alignment:
Q  1 atacattgatggactattttagcctgacatgtatccaatgtctcgatctgtccgtggatgcaaaagtaaatgttaagaaacatataagtgagatgat--c 98  Q
    |||||||| ||||||||||||| ||  |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||       
T  49880276 atacattggtggactattttagtctcgcatgtatccaatgtctagatccgtccctggatgcaaaagtaaatgttaagaaacatataagtgagatgataaa 49880375  T
Q  99 gatatacctaatacactaagattttcgatgatgatgtgctatcaattgtacgattaaccttaacataatgtgatgat 175  Q
    |||||||||||||||||||||||||   |||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  49880376 gatatacctaatacactaagattttgattgatgatgtgttgtcaattgtatgattaaccttaacataatgtgatgat 49880452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 16853665 - 16853737
Alignment:
Q  64 aagtaaatgttaagaaacatataagtgagatgatcgatatacctaatacactaagattttcgatgatgatgtg 136  Q
    |||||||| || | ||||||||||||||||||||| |||||| |||| |  |||| |||| | ||||||||||    
T  16853665 aagtaaatcttgaaaaacatataagtgagatgatcaatatacataatgctttaaggttttgggtgatgatgtg 16853737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 31088829 - 31088746
Alignment:
Q  55 tggatgcaaaagtaaatgttaagaaacatata--agtgagatgatcgatatacctaatacactaagattttcgatgatgatgtg 136  Q
    ||||||||| ||||  |||| |||||||||||  |||||||||||| ||||||||||| |  ||| ||||| ||||||| ||||    
T  31088829 tggatgcaagagtaggtgttgagaaacatatataagtgagatgatcaatatacctaatgccttaatattttggatgatggtgtg 31088746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 50239968 - 50240138
Alignment:
Q  3 acattgatggactattttagcctgacatgtatccaatgtctcgatctgtccgtggatgcaaaagtaaatgttaa---gaaacatataagtgagatgatcg 99  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||||||||| | ||||||||||||||||||||   |||||||||||||||||||||||    
T  50239968 acattgatggactattttagcctcacatgtagccaatgtctagatctgtccctcgatgcaaaagtaaatgttaattagaaacatataagtgagatgatcg 50240067  T
Q  100 atatacctaatacactaagattttcgatgatgatgtgctatcaattgtacgattaaccttaacataatgtg 170  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  50240068 atatacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttaacataatgtg 50240138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 145
Target Start/End: Complemental strand, 14249290 - 14249223
Alignment:
Q  78 aaacatataagtgagatgatcgatatacctaatacactaagattttcgatgatgatgtgctatcaatt 145  Q
    ||||||||||||||||||| | |||||| ||||||  |||| |||| | |||||||||| ||||||||    
T  14249290 aaacatataagtgagatgaccaatatacataatactttaaggttttgggtgatgatgtggtatcaatt 14249223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 20043 - 19869
Alignment:
Q  1 atacattgatggactattttagcctgacatgtatccaatgtctcgatctgtccgtggatgcaaaagtaaatgttaagaaacatataagtgagatgatcga 100  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||| ||| ||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  20043 atacattgatggactatcttaacctcacatgtatccaatgtctagatttgtccctgaatgcaaaagtaaatgttaagaaacatataagtgagatgatcga 19944  T
Q  101 tatacctaatacactaagattttcgatgatgatgtgctatcaattgtacgattaaccttaacataatgtgatgat 175  Q
    ||||||||||||||||||||||| ||||||||||||||  ||||||||  ||||||| |||||||||||||||||    
T  19943 tatacctaatacactaagattttggatgatgatgtgctgccaattgtattattaaccataacataatgtgatgat 19869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 9023465 - 9023635
Alignment:
Q  1 atacattgatggactattttagcctgacatgtatccaatgtctcgatctgtccgtggatgcaaaagtaaatgttaagaaacatataagtgagatgatcga 100  Q
    |||||||||| |||||| ||||||| |||||||||||||||||  || ||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  9023465 atacattgatagactatcttagcctcacatgtatccaatgtctatatttgtccctggatgcaaaagtaaatgttaagaaacatacaagtgagatgatcga 9023564  T
Q  101 tatacctaatacactaagattttcgatgatgatgtgctatcaattgtacgattaaccttaacataatgtga 171  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||||| ||||||||||||||||||||||    
T  9023565 tatacctaatacactaagattttggatgatgatgtgttgtcaattgtatgattaaccttaacataatgtga 9023635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 29209 - 29157
Alignment:
Q  55 tggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatatacct 107  Q
    |||||||||||||| |||||||  |||||||||||||||||||| ||||||||    
T  29209 tggatgcaaaagtagatgttaaacaacatataagtgagatgatcaatatacct 29157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 136
Target Start/End: Original strand, 32751 - 32829
Alignment:
Q  57 gatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatatacctaatacactaagattttcgatgatgatgtg 136  Q
    ||||||| || | |||||||||||||||||||||||||||  ||||||||| || |  ||| ||||| ||||||||||||    
T  32751 gatgcaagagcatatgttaagaaacatataagtgagatgactgatatacctgatgcgttaaaatttt-gatgatgatgtg 32829  T

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Target: scaffold0191 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 11645 - 11703
Alignment:
Q  78 aaacatataagtgagatgatcgatatacctaatacactaagattttcgatgatgatgtg 136  Q
    ||||||||||||||||||||| |||||| ||||||  |||| |||| | ||||||||||    
T  11645 aaacatataagtgagatgatcaatatacataatactttaaggttttgggtgatgatgtg 11703  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 2929478 - 2929532
Alignment:
Q  57 gatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatatacctaata 111  Q
    |||| ||||||| ||||||||||||||||| ||||||||| | | ||||||||||    
T  2929478 gatgtaaaagtagatgttaagaaacatatatgtgagatgaccaagatacctaata 2929532  T

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Target: chr6 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6525067 - 6525116
Alignment:
Q  1 atacattgatggactattttagcctgacatgtatccaatgtctcgatctg 50  Q
    |||||||||||||||||||||| |  ||||||||| ||||||| ||||||    
T  6525067 atacattgatggactattttagtcccacatgtatcaaatgtctagatctg 6525116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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