View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0886_low_61 (Length: 228)
Name: NF0886_low_61
Description: NF0886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0886_low_61 |
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Alignment Details
Target: chr3 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 38 - 174
Target Start/End: Original strand, 47246361 - 47246497
Alignment:
| Q |
38 |
aagtcaacatcagtaactacactaacaaatccagcatcagacaatcaacatcattcatattttattagttcaatcgaaaatttcattttagtttttccca |
137 |
Q |
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| T |
47246361 |
aagtcaacatcagtaactacactaacaaatccagcatcagacaatcaacatcattcatattttattagttcaatcgaaaatttcatattagtttttccca |
47246460 |
T |
|
| Q |
138 |
aaaagaaaatgaattttggttcaatcaagttgatctt |
174 |
Q |
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||||||||||| ||||||||||||||||||||||||| |
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| T |
47246461 |
aaaagaaaatgtattttggttcaatcaagttgatctt |
47246497 |
T |
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