View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0887_low_1 (Length: 453)

Name: NF0887_low_1
Description: NF0887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0887_low_1
NF0887_low_1
[»] chr6 (74 HSPs)
chr6 (1-441)||(32320656-32321095)
chr6 (10-100)||(9027151-9027241)
chr6 (27-85)||(17341677-17341735)
chr6 (14-99)||(5732510-5732595)
chr6 (10-115)||(10770670-10770775)
chr6 (14-86)||(7265593-7265665)
chr6 (14-90)||(19040335-19040411)
chr6 (10-65)||(9025490-9025545)
chr6 (9-108)||(12696289-12696388)
chr6 (9-100)||(16766670-16766761)
chr6 (11-97)||(3398595-3398680)
chr6 (16-98)||(9658854-9658936)
chr6 (9-91)||(26562671-26562753)
chr6 (9-73)||(10888969-10889033)
chr6 (9-100)||(9107365-9107456)
chr6 (14-101)||(33001289-33001376)
chr6 (9-115)||(34073342-34073449)
chr6 (14-100)||(426514-426600)
chr6 (14-117)||(7027195-7027301)
chr6 (14-92)||(20371110-20371188)
chr6 (26-75)||(5462684-5462733)
chr6 (9-86)||(7723245-7723322)
chr6 (13-70)||(9617437-9617494)
chr6 (14-99)||(9629357-9629442)
chr6 (24-72)||(1532241-1532289)
chr6 (15-99)||(13360373-13360457)
chr6 (10-86)||(19044451-19044527)
chr6 (28-72)||(31579239-31579283)
chr6 (10-65)||(7086803-7086858)
chr6 (14-73)||(7377979-7378038)
chr6 (9-99)||(10339120-10339211)
chr6 (29-108)||(31959124-31959203)
chr6 (11-65)||(9195751-9195805)
chr6 (15-97)||(13851712-13851794)
chr6 (16-114)||(16833267-16833365)
chr6 (14-100)||(34595107-34595193)
chr6 (12-65)||(7151420-7151473)
chr6 (15-100)||(7938089-7938174)
chr6 (9-98)||(8365514-8365603)
chr6 (16-65)||(26178683-26178732)
chr6 (19-72)||(30866149-30866202)
chr6 (14-75)||(32511666-32511727)
chr6 (29-73)||(5970123-5970167)
chr6 (14-86)||(7996378-7996450)
chr6 (14-86)||(8022351-8022423)
chr6 (29-101)||(8776988-8777060)
chr6 (14-78)||(21924935-21924999)
chr6 (11-78)||(28862116-28862184)
chr6 (9-80)||(6665206-6665277)
chr6 (29-92)||(17841604-17841667)
chr6 (10-73)||(19147842-19147905)
chr6 (29-84)||(25038086-25038141)
chr6 (14-84)||(7977830-7977900)
chr6 (24-78)||(10842527-10842581)
chr6 (9-75)||(13815440-13815506)
chr6 (11-65)||(24138434-24138488)
chr6 (14-92)||(28152080-28152157)
chr6 (11-65)||(31384928-31384982)
chr6 (34-72)||(34447378-34447416)
chr6 (9-78)||(8931597-8931666)
chr6 (11-100)||(10294080-10294169)
chr6 (43-92)||(10649309-10649358)
chr6 (24-61)||(11591880-11591917)
chr6 (14-75)||(14155239-14155300)
chr6 (27-64)||(16388246-16388283)
chr6 (14-75)||(28715293-28715354)
chr6 (43-100)||(33340414-33340471)
chr6 (43-100)||(35125627-35125684)
chr6 (10-86)||(677824-677900)
chr6 (9-65)||(9522899-9522955)
chr6 (9-53)||(16488585-16488629)
chr6 (29-92)||(17302537-17302601)
chr6 (9-53)||(18367856-18367900)
chr6 (36-76)||(32839668-32839708)
[»] chr8 (50 HSPs)
chr8 (11-80)||(11927083-11927152)
chr8 (11-97)||(11803235-11803321)
chr8 (11-78)||(11944660-11944727)
chr8 (14-108)||(24669398-24669492)
chr8 (14-86)||(4786338-4786410)
chr8 (14-115)||(20873027-20873128)
chr8 (9-100)||(22651949-22652040)
chr8 (14-73)||(34897085-34897144)
chr8 (10-84)||(25172694-25172768)
chr8 (14-115)||(33405384-33405486)
chr8 (9-78)||(24362197-24362266)
chr8 (17-73)||(4611534-4611590)
chr8 (14-78)||(13844596-13844660)
chr8 (11-75)||(25566839-25566903)
chr8 (11-86)||(15816126-15816201)
chr8 (10-73)||(28384990-28385053)
chr8 (9-100)||(29510299-29510390)
chr8 (16-70)||(13018284-13018338)
chr8 (15-65)||(14134707-14134757)
chr8 (14-92)||(31109518-31109596)
chr8 (15-85)||(31556985-31557054)
chr8 (24-78)||(39954289-39954343)
chr8 (16-81)||(7658455-7658520)
chr8 (33-74)||(18067953-18067994)
chr8 (17-78)||(31236580-31236641)
chr8 (9-65)||(16641969-16642025)
chr8 (13-53)||(26902174-26902214)
chr8 (9-65)||(34222955-34223011)
chr8 (10-65)||(2572052-2572107)
chr8 (14-65)||(3025559-3025610)
chr8 (14-65)||(4948660-4948711)
chr8 (34-73)||(41831960-41831999)
chr8 (16-66)||(3677793-3677843)
chr8 (14-52)||(8847277-8847315)
chr8 (15-65)||(12606830-12606880)
chr8 (15-65)||(20679396-20679446)
chr8 (15-100)||(4673426-4673511)
chr8 (9-86)||(13436959-13437036)
chr8 (24-65)||(14731720-14731761)
chr8 (29-115)||(22595951-22596038)
chr8 (19-100)||(27213520-27213601)
chr8 (11-72)||(28383827-28383888)
chr8 (15-72)||(33382020-33382077)
chr8 (24-73)||(36934670-36934719)
chr8 (13-65)||(8342980-8343032)
chr8 (26-98)||(13203616-13203688)
chr8 (24-116)||(29775993-29776085)
chr8 (9-53)||(34451032-34451076)
chr8 (28-92)||(37283824-37283888)
chr8 (16-64)||(40332200-40332248)
[»] chr7 (71 HSPs)
chr7 (9-116)||(15902779-15902886)
chr7 (9-85)||(22602705-22602781)
chr7 (9-86)||(32308107-32308184)
chr7 (9-97)||(1433430-1433518)
chr7 (9-99)||(26329377-26329467)
chr7 (10-100)||(27945014-27945104)
chr7 (24-101)||(22868014-22868091)
chr7 (15-91)||(1401007-1401083)
chr7 (14-86)||(20549778-20549850)
chr7 (14-98)||(26733279-26733363)
chr7 (15-86)||(5835234-5835305)
chr7 (9-100)||(13770664-13770755)
chr7 (15-86)||(23191883-23191954)
chr7 (9-100)||(24339615-24339706)
chr7 (28-78)||(11700798-11700848)
chr7 (9-86)||(5409831-5409908)
chr7 (28-101)||(29787383-29787456)
chr7 (11-108)||(49107786-49107882)
chr7 (9-73)||(5548676-5548740)
chr7 (9-65)||(7328686-7328742)
chr7 (37-112)||(11722121-11722197)
chr7 (9-65)||(16341504-16341560)
chr7 (11-86)||(6630909-6630984)
chr7 (15-78)||(19206045-19206108)
chr7 (10-93)||(21828401-21828484)
chr7 (29-108)||(24105643-24105722)
chr7 (29-100)||(25481875-25481946)
chr7 (15-86)||(42720891-42720962)
chr7 (9-87)||(7438692-7438770)
chr7 (10-64)||(27229307-27229360)
chr7 (17-78)||(3520345-3520406)
chr7 (10-99)||(5235960-5236049)
chr7 (35-115)||(12289071-12289152)
chr7 (9-62)||(17307904-17307957)
chr7 (13-65)||(19992009-19992061)
chr7 (15-115)||(22483984-22484083)
chr7 (9-65)||(26033456-26033512)
chr7 (18-74)||(27732243-27732299)
chr7 (17-84)||(2425736-2425803)
chr7 (14-65)||(3721101-3721152)
chr7 (9-80)||(7758315-7758386)
chr7 (10-65)||(18013070-18013125)
chr7 (11-78)||(23128658-23128725)
chr7 (14-73)||(32287463-32287522)
chr7 (11-66)||(35297669-35297724)
chr7 (18-84)||(4008568-4008634)
chr7 (18-84)||(4013960-4014026)
chr7 (9-63)||(9778510-9778564)
chr7 (9-67)||(11890914-11890972)
chr7 (10-64)||(12843171-12843225)
chr7 (24-70)||(17851434-17851480)
chr7 (10-64)||(19930937-19930991)
chr7 (15-52)||(640134-640171)
chr7 (28-65)||(2424622-2424659)
chr7 (10-67)||(5233635-5233692)
chr7 (13-66)||(9408333-9408386)
chr7 (11-92)||(10042918-10042999)
chr7 (9-78)||(11665435-11665504)
chr7 (9-65)||(18039006-18039063)
chr7 (14-95)||(21880130-21880211)
chr7 (16-73)||(27093415-27093472)
chr7 (16-73)||(27184829-27184886)
chr7 (10-99)||(43027465-43027554)
chr7 (27-92)||(43249974-43250039)
chr7 (13-65)||(3991332-3991384)
chr7 (9-72)||(21138991-21139051)
chr7 (8-92)||(23784341-23784425)
chr7 (14-78)||(28155565-28155629)
chr7 (34-78)||(30731032-30731076)
chr7 (9-73)||(33384577-33384641)
chr7 (18-74)||(38134410-38134466)
[»] chr2 (54 HSPs)
chr2 (29-115)||(30404865-30404951)
chr2 (11-75)||(44860318-44860382)
chr2 (24-98)||(21616737-21616811)
chr2 (17-101)||(23717998-23718082)
chr2 (17-101)||(24105670-24105754)
chr2 (27-115)||(27286305-27286393)
chr2 (28-72)||(28412351-28412395)
chr2 (14-78)||(28677904-28677967)
chr2 (14-70)||(34691805-34691861)
chr2 (14-70)||(34714217-34714273)
chr2 (15-86)||(18276508-18276579)
chr2 (28-99)||(21782832-21782903)
chr2 (15-86)||(32199141-32199212)
chr2 (24-115)||(35449471-35449562)
chr2 (14-73)||(37411244-37411303)
chr2 (9-65)||(12668418-12668474)
chr2 (28-92)||(16069268-16069332)
chr2 (15-115)||(18841014-18841114)
chr2 (8-72)||(30527589-30527653)
chr2 (16-72)||(39279676-39279732)
chr2 (14-100)||(2438719-2438803)
chr2 (14-65)||(5367200-5367251)
chr2 (10-65)||(18622614-18622669)
chr2 (10-72)||(2331795-2331855)
chr2 (29-107)||(12940950-12941028)
chr2 (24-86)||(31808064-31808126)
chr2 (15-60)||(38355888-38355933)
chr2 (38-78)||(19959810-19959850)
chr2 (14-70)||(23921256-23921312)
chr2 (27-103)||(25080870-25080946)
chr2 (10-74)||(29970545-29970609)
chr2 (9-65)||(30717525-30717581)
chr2 (9-53)||(34784977-34785021)
chr2 (10-70)||(36281688-36281748)
chr2 (14-53)||(20242727-20242766)
chr2 (12-99)||(20539672-20539759)
chr2 (10-73)||(24975321-24975384)
chr2 (28-115)||(36409641-36409728)
chr2 (29-92)||(39323245-39323308)
chr2 (34-80)||(10535779-10535825)
chr2 (14-92)||(15972854-15972932)
chr2 (14-92)||(18421944-18422022)
chr2 (15-65)||(18889592-18889642)
chr2 (34-72)||(22084852-22084890)
chr2 (11-65)||(36756341-36756395)
chr2 (14-92)||(37558958-37559036)
chr2 (15-73)||(42832277-42832335)
chr2 (35-92)||(24894370-24894427)
chr2 (16-100)||(31284021-31284106)
chr2 (38-95)||(32355405-32355462)
chr2 (9-58)||(35056883-35056932)
chr2 (29-115)||(38117174-38117261)
chr2 (19-92)||(10547933-10548008)
chr2 (26-86)||(41942092-41942152)
[»] chr4 (56 HSPs)
chr4 (24-107)||(22440610-22440693)
chr4 (5-65)||(35952608-35952668)
chr4 (21-71)||(903924-903974)
chr4 (14-92)||(40179636-40179714)
chr4 (9-73)||(5775353-5775417)
chr4 (9-72)||(6863154-6863217)
chr4 (9-92)||(7012047-7012130)
chr4 (9-115)||(46160854-46160960)
chr4 (13-114)||(35723383-35723484)
chr4 (10-91)||(30838192-30838273)
chr4 (27-99)||(14126124-14126196)
chr4 (14-86)||(15029752-15029824)
chr4 (38-98)||(20521873-20521933)
chr4 (24-100)||(36635297-36635373)
chr4 (14-78)||(54580023-54580087)
chr4 (14-73)||(8423718-8423777)
chr4 (19-78)||(40613445-40613504)
chr4 (9-92)||(40742572-40742655)
chr4 (10-100)||(5414168-5414258)
chr4 (9-78)||(22234885-22234955)
chr4 (14-100)||(23292986-23293072)
chr4 (34-84)||(30522935-30522985)
chr4 (9-71)||(30982873-30982935)
chr4 (11-81)||(40865019-40865089)
chr4 (14-115)||(49430983-49431085)
chr4 (15-64)||(9996849-9996898)
chr4 (14-115)||(12797338-12797438)
chr4 (15-100)||(35157986-35158071)
chr4 (28-84)||(2234239-2234295)
chr4 (10-86)||(11596348-11596424)
chr4 (9-73)||(11931280-11931344)
chr4 (9-65)||(15659755-15659811)
chr4 (9-53)||(19312355-19312399)
chr4 (9-108)||(3947761-3947860)
chr4 (17-72)||(16189710-16189765)
chr4 (34-89)||(20743298-20743353)
chr4 (11-70)||(39035925-39035983)
chr4 (14-92)||(12895274-12895352)
chr4 (9-63)||(13134460-13134514)
chr4 (9-63)||(18576032-18576086)
chr4 (15-101)||(21539868-21539954)
chr4 (10-78)||(4099956-4100027)
chr4 (10-86)||(7970508-7970582)
chr4 (38-95)||(8820386-8820443)
chr4 (35-64)||(21873392-21873421)
chr4 (35-64)||(21929253-21929282)
chr4 (27-100)||(24343480-24343553)
chr4 (16-65)||(29205452-29205501)
chr4 (12-92)||(30298927-30299008)
chr4 (12-92)||(30327795-30327876)
chr4 (9-65)||(12895111-12895167)
chr4 (9-73)||(18513236-18513300)
chr4 (15-75)||(21720508-21720568)
chr4 (14-86)||(21945490-21945562)
chr4 (29-65)||(28964263-28964299)
chr4 (34-98)||(34515894-34515958)
[»] chr1 (88 HSPs)
chr1 (9-84)||(1486704-1486779)
chr1 (34-101)||(2896141-2896208)
chr1 (9-115)||(9629895-9630001)
chr1 (27-100)||(398778-398851)
chr1 (15-115)||(36878418-36878519)
chr1 (15-107)||(5898267-5898359)
chr1 (10-78)||(9828039-9828107)
chr1 (10-115)||(24577182-24577288)
chr1 (10-101)||(6427322-6427413)
chr1 (14-65)||(40181879-40181930)
chr1 (10-100)||(7918207-7918297)
chr1 (16-86)||(13997870-13997940)
chr1 (9-63)||(44482240-44482294)
chr1 (14-92)||(52903230-52903308)
chr1 (16-73)||(1864882-1864939)
chr1 (11-100)||(10572586-10572675)
chr1 (11-75)||(34371712-34371775)
chr1 (9-100)||(5376495-5376586)
chr1 (9-100)||(6612166-6612257)
chr1 (10-73)||(20157346-20157409)
chr1 (14-97)||(42359449-42359532)
chr1 (9-63)||(25361896-25361950)
chr1 (38-110)||(1262846-1262919)
chr1 (24-73)||(17425103-17425152)
chr1 (15-92)||(19562622-19562699)
chr1 (14-98)||(9709795-9709879)
chr1 (24-92)||(32724108-32724176)
chr1 (9-73)||(38503320-38503384)
chr1 (14-65)||(14332642-14332693)
chr1 (11-74)||(25272481-25272544)
chr1 (26-73)||(34257922-34257969)
chr1 (9-83)||(113289-113363)
chr1 (9-100)||(5944254-5944347)
chr1 (11-65)||(6332679-6332732)
chr1 (29-115)||(14359537-14359622)
chr1 (24-86)||(17831541-17831603)
chr1 (14-92)||(38078661-38078739)
chr1 (29-115)||(48450602-48450688)
chr1 (24-85)||(19324550-19324611)
chr1 (24-73)||(25098565-25098614)
chr1 (21-98)||(34298411-34298488)
chr1 (9-73)||(17754311-17754375)
chr1 (15-115)||(23636050-23636150)
chr1 (15-103)||(27471567-27471655)
chr1 (15-115)||(28273089-28273189)
chr1 (26-78)||(28674795-28674847)
chr1 (9-65)||(34712378-34712434)
chr1 (14-78)||(39953146-39953210)
chr1 (14-86)||(41877470-41877542)
chr1 (9-65)||(47989505-47989561)
chr1 (10-65)||(1704988-1705043)
chr1 (14-53)||(30749860-30749899)
chr1 (14-53)||(30771311-30771350)
chr1 (15-66)||(40258934-40258985)
chr1 (9-72)||(40285649-40285712)
chr1 (15-73)||(2784556-2784614)
chr1 (40-86)||(9103627-9103673)
chr1 (24-78)||(12443470-12443524)
chr1 (11-77)||(12611962-12612028)
chr1 (14-64)||(18337338-18337388)
chr1 (14-115)||(19058856-19058958)
chr1 (14-80)||(22781435-22781501)
chr1 (14-92)||(46348383-46348461)
chr1 (20-65)||(351090-351135)
chr1 (35-72)||(2851022-2851059)
chr1 (15-92)||(6415002-6415079)
chr1 (24-65)||(10233261-10233302)
chr1 (33-78)||(10474996-10475041)
chr1 (16-65)||(12713329-12713378)
chr1 (16-65)||(12717420-12717469)
chr1 (35-92)||(16812524-16812581)
chr1 (9-98)||(21038058-21038147)
chr1 (14-91)||(22515887-22515964)
chr1 (40-100)||(5927366-5927426)
chr1 (36-72)||(9449030-9449066)
chr1 (9-92)||(12715152-12715238)
chr1 (14-78)||(13436453-13436517)
chr1 (12-92)||(18556454-18556534)
chr1 (14-78)||(21530684-21530748)
chr1 (14-86)||(22881616-22881688)
chr1 (29-65)||(31015051-31015087)
chr1 (14-86)||(31672895-31672967)
chr1 (9-53)||(35919271-35919315)
chr1 (24-72)||(36905998-36906046)
chr1 (14-86)||(37598819-37598890)
chr1 (9-100)||(40917724-40917813)
chr1 (9-73)||(44296490-44296553)
chr1 (11-74)||(48148034-48148098)
[»] chr5 (57 HSPs)
chr5 (14-115)||(28588674-28588774)
chr5 (10-115)||(2436879-2436985)
chr5 (10-86)||(3966490-3966566)
chr5 (10-100)||(19579674-19579764)
chr5 (29-115)||(21576760-21576848)
chr5 (9-86)||(39698528-39698605)
chr5 (11-75)||(6471886-6471950)
chr5 (13-114)||(11685898-11685999)
chr5 (14-100)||(21191056-21191142)
chr5 (14-72)||(30502388-30502446)
chr5 (14-72)||(30542731-30542789)
chr5 (16-73)||(23220983-23221040)
chr5 (14-99)||(26312743-26312828)
chr5 (11-72)||(36838544-36838605)
chr5 (9-97)||(37328839-37328927)
chr5 (27-70)||(5467991-5468034)
chr5 (34-97)||(19552563-19552626)
chr5 (9-100)||(21522723-21522814)
chr5 (9-100)||(21533289-21533380)
chr5 (24-75)||(24273040-24273091)
chr5 (24-75)||(24389123-24389174)
chr5 (29-100)||(24906316-24906387)
chr5 (10-65)||(41091253-41091308)
chr5 (34-88)||(4344727-4344781)
chr5 (14-100)||(6247595-6247681)
chr5 (10-100)||(13287395-13287485)
chr5 (9-87)||(18592059-18592137)
chr5 (24-86)||(27144450-27144512)
chr5 (9-86)||(6035470-6035546)
chr5 (9-86)||(31084310-31084387)
chr5 (13-86)||(40131608-40131681)
chr5 (9-65)||(7677713-7677769)
chr5 (9-65)||(22423807-22423863)
chr5 (27-75)||(23016002-23016050)
chr5 (14-78)||(32630735-32630799)
chr5 (9-73)||(38749558-38749622)
chr5 (29-100)||(6326312-6326383)
chr5 (26-73)||(10022632-10022679)
chr5 (29-92)||(14674250-14674313)
chr5 (14-65)||(16203795-16203846)
chr5 (27-70)||(30098329-30098372)
chr5 (14-53)||(42029772-42029811)
chr5 (16-86)||(19737484-19737554)
chr5 (24-86)||(33035811-33035873)
chr5 (40-73)||(7175045-7175078)
chr5 (14-63)||(18421841-18421890)
chr5 (35-100)||(21137662-21137727)
chr5 (29-78)||(27932230-27932279)
chr5 (15-100)||(36642763-36642848)
chr5 (33-66)||(40000554-40000587)
chr5 (5-73)||(16374333-16374401)
chr5 (26-70)||(17593734-17593778)
chr5 (24-72)||(19168831-19168879)
chr5 (9-53)||(21814281-21814325)
chr5 (9-73)||(32766938-32767002)
chr5 (25-65)||(35017045-35017085)
chr5 (9-65)||(40211964-40212020)
[»] scaffold0123 (1 HSPs)
scaffold0123 (9-76)||(44520-44587)
[»] chr3 (63 HSPs)
chr3 (14-73)||(7928450-7928509)
chr3 (29-115)||(26508068-26508154)
chr3 (14-99)||(8383231-8383316)
chr3 (14-115)||(26492205-26492306)
chr3 (9-73)||(16192745-16192809)
chr3 (9-72)||(8039830-8039893)
chr3 (9-100)||(32429375-32429466)
chr3 (9-99)||(9800014-9800104)
chr3 (11-65)||(11665952-11666006)
chr3 (34-112)||(10954911-10954991)
chr3 (34-115)||(14979139-14979220)
chr3 (11-100)||(15796291-15796380)
chr3 (24-73)||(32804550-32804599)
chr3 (9-65)||(25948882-25948938)
chr3 (12-100)||(28917974-28918062)
chr3 (29-88)||(4987306-4987365)
chr3 (39-86)||(15544680-15544727)
chr3 (27-78)||(34307793-34307844)
chr3 (26-72)||(4201397-4201443)
chr3 (11-65)||(17005616-17005670)
chr3 (14-92)||(55401056-55401134)
chr3 (14-63)||(8789550-8789599)
chr3 (29-86)||(10268501-10268558)
chr3 (24-101)||(11658787-11658864)
chr3 (27-100)||(24205054-24205127)
chr3 (13-86)||(26290358-26290431)
chr3 (9-65)||(11313795-11313851)
chr3 (11-75)||(15314873-15314937)
chr3 (14-70)||(38731221-38731277)
chr3 (14-73)||(40993335-40993395)
chr3 (14-70)||(49505154-49505210)
chr3 (9-65)||(49651781-49651837)
chr3 (14-73)||(7614415-7614474)
chr3 (26-73)||(10690274-10690321)
chr3 (23-78)||(12704002-12704057)
chr3 (16-75)||(24633403-24633462)
chr3 (14-65)||(48353731-48353782)
chr3 (13-75)||(1509537-1509599)
chr3 (10-72)||(1550141-1550203)
chr3 (34-92)||(4466620-4466678)
chr3 (24-98)||(14618756-14618830)
chr3 (15-65)||(20691327-20691377)
chr3 (34-92)||(21720745-21720803)
chr3 (27-73)||(23870572-23870618)
chr3 (11-65)||(28678311-28678365)
chr3 (25-74)||(9624640-9624689)
chr3 (28-65)||(11251986-11252023)
chr3 (9-86)||(14829677-14829753)
chr3 (27-72)||(14840304-14840349)
chr3 (10-67)||(16789018-16789075)
chr3 (29-86)||(21479105-21479162)
chr3 (24-65)||(29508452-29508493)
chr3 (34-75)||(51206373-51206414)
chr3 (22-86)||(1438791-1438855)
chr3 (25-65)||(11493372-11493412)
chr3 (34-98)||(11610496-11610560)
chr3 (9-65)||(14209121-14209177)
chr3 (14-78)||(18426944-18427008)
chr3 (28-100)||(25064882-25064954)
chr3 (26-86)||(29112292-29112352)
chr3 (10-78)||(34185119-34185187)
chr3 (29-65)||(34910325-34910361)
chr3 (38-86)||(40052319-40052367)
[»] scaffold0168 (1 HSPs)
scaffold0168 (9-98)||(21018-21107)
[»] scaffold0110 (1 HSPs)
scaffold0110 (10-91)||(28832-28913)
[»] scaffold0223 (1 HSPs)
scaffold0223 (9-100)||(20145-20236)
[»] scaffold0171 (1 HSPs)
scaffold0171 (9-108)||(23385-23484)
[»] scaffold0027 (1 HSPs)
scaffold0027 (29-100)||(46655-46726)
[»] scaffold0020 (1 HSPs)
scaffold0020 (10-65)||(135308-135363)
[»] scaffold0036 (1 HSPs)
scaffold0036 (11-65)||(9744-9798)
[»] scaffold0652 (1 HSPs)
scaffold0652 (14-91)||(462-539)
[»] scaffold0003 (1 HSPs)
scaffold0003 (11-100)||(241567-241656)
[»] scaffold0236 (1 HSPs)
scaffold0236 (11-74)||(25765-25828)
[»] scaffold0136 (1 HSPs)
scaffold0136 (11-86)||(3846-3921)
[»] scaffold0103 (1 HSPs)
scaffold0103 (29-92)||(51792-51855)
[»] scaffold0050 (1 HSPs)
scaffold0050 (14-73)||(70278-70337)
[»] scaffold0044 (1 HSPs)
scaffold0044 (9-64)||(53189-53244)
[»] scaffold0018 (2 HSPs)
scaffold0018 (29-108)||(192264-192343)
scaffold0018 (8-100)||(178812-178905)
[»] scaffold0004 (1 HSPs)
scaffold0004 (29-86)||(92794-92851)
[»] scaffold1528 (1 HSPs)
scaffold1528 (9-73)||(1035-1099)
[»] scaffold0025 (1 HSPs)
scaffold0025 (11-86)||(23756-23832)
[»] scaffold0008 (1 HSPs)
scaffold0008 (9-65)||(263367-263423)
[»] scaffold0022 (2 HSPs)
scaffold0022 (26-108)||(90807-90890)
scaffold0022 (10-73)||(99893-99956)
[»] scaffold0021 (1 HSPs)
scaffold0021 (29-100)||(130455-130526)
[»] scaffold0053 (1 HSPs)
scaffold0053 (14-100)||(8771-8857)
[»] scaffold0306 (1 HSPs)
scaffold0306 (35-92)||(13381-13438)
[»] scaffold0152 (1 HSPs)
scaffold0152 (35-92)||(21889-21946)
[»] scaffold0085 (1 HSPs)
scaffold0085 (24-65)||(26401-26442)
[»] scaffold0007 (1 HSPs)
scaffold0007 (27-100)||(225281-225354)
[»] scaffold0697 (1 HSPs)
scaffold0697 (14-78)||(1639-1703)
[»] scaffold0376 (1 HSPs)
scaffold0376 (13-65)||(6320-6372)
[»] scaffold0361 (1 HSPs)
scaffold0361 (29-65)||(14538-14574)


Alignment Details
Target: chr6 (Bit Score: 409; Significance: 0; HSPs: 74)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Original strand, 32320656 - 32321095
Alignment:
Q  1 cggtcacgcgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32320656 cggtcacacgacacgacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgctcgtgttgtgtccg 32320755  T
Q  101 tatccgtacttcatattacacatataataaaataacaaggactaaaaacatatataattttcttttacctgttaaaacgagtatgacatgctcaaccata 200  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32320756 tatccgtatttcatattacacatataataaaacaacaaggactaaaaacatatataattttcttttacctgttaaaacgagtatgacatgctcaaccata 32320855  T
Q  201 tctccagaactgctttgttcacttttaatatacctcaaaatcctattgcacaattttaacaaatttttagattgttaaattaacatgtctatatcaatgg 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32320856 tctccagaactgctttgttcacttttaatatacctcaaaatcctattgcacaattttaacaaatttttagattgttaaattaacatgtctatatcaatgg 32320955  T
Q  301 attatcattagatggtaataaataagtgatttcaagatttaattaattacctttctttaaggtatgtagaatttgaaaagtagataggagaaccaacttg 400  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32320956 attatcattagatggtaataaataagtga-ttcaagatttaattaattacctttctttaaggtatgtagaatttgaaaagtatataggagaaccaacttg 32321054  T
Q  401 tataattagaactcctggaattgttgaagcattagaatatt 441  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  32321055 tataattagaactcctggaattgttgaagcattagaatatt 32321095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 9027241 - 9027151
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||||||| ||||||||| |||| ||||||||||||| | ||||||||||| ||||||| |||| ||||||| ||||| |||||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 9027151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 17341677 - 17341735
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtg 85  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  17341677 tataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtg 17341735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 5732510 - 5732595
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc 99  Q
    ||||||||| ||||||||| ||||| || ||||||||||| ||||||||||||||||||| |||| ||||||| | ||| ||||||    
T  5732510 cgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtcc 5732595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 10770670 - 10770775
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtac 109  Q
    ||||||||||||| || | |||| |||||||||||||||||||| |||||||||||   ||||  |||| ||||||| | ||| |||||||||||||| |    
T  10770670 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtccgtatccgtgc 10770769  T
Q  110 ttcata 115  Q
    ||||||    
T  10770770 ttcata 10770775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 7265593 - 7265665
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||| ||||||||| |||||||||||||||||||| ||||||||||| ||||||  |||| |||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgt 7265665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 19040411 - 19040335
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgt 90  Q
    |||||| || ||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||| ||||| |||||    
T  19040411 cgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtattcgt 19040335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 9025490 - 9025545
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 12696388 - 12696289
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgta 108  Q
    ||||||||||| || || | |||| |||||||||||||| ||||| ||||||||||| | ||||| |||| ||||||| ||||| |||||||| ||||||    
T  12696388 cgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgtgtccgta 12696289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 16766761 - 16766670
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||||||| || | |||| |||||||||||||||||||| ||||||||||| | ||||| |||| ||||||| | ||| |||||||    
T  16766761 cgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccg 16766670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 3398680 - 3398595
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgt 97  Q
    ||||||||||||||| |||||| |||||||||||| ||||||| ||||||||||| | ||||| |||| ||||||| ||||| ||||    
T  3398680 acacgacaccgatacttataattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 3398595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 9658936 - 9658854
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtc 98  Q
    ||||||| | ||||||| |||||||||||||||||||| | ||||||||| ||||||| |||| ||||||| ||||| |||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 26562753 - 26562671
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtg 91  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||| ||||||| ||| | ||||| |||| || |||||||||    
T  26562753 cgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtg 26562671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 10888969 - 10889033
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||||||||  | ||||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  10888969 cgacacgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgtc 10889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 9107365 - 9107456
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||||||| || | |||| |||||||||| ||||||||| ||||||||||| | ||||| |||| | ||||| ||||| |||||||    
T  9107365 cgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccg 9107456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 33001289 - 33001376
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgt 101  Q
    ||||||||| ||||||||| ||| | |||||||||||||| ||||||||||| | ||||| |||| ||| ||  ||||||||||||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtcattgaccgtgttgtgtccgt 33001376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 34073342 - 34073449
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc-gtatccgt 107  Q
    ||||||||||||||  |||||||| ||||||||||||| |||||| ||||||||||| || |||  || | ||||||| ||||| |||||| || |||||    
T  34073342 cgacacgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtgtccgt 34073441  T
Q  108 acttcata 115  Q
     |||||||    
T  34073442 gcttcata 34073449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 426514 - 426600
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||| || | |||| ||| | |||||||||||||| ||||||||||||| ||||| |||| ||||||| ||||| |||||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccg 426600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 7027301 - 7027195
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtga-ttttatcaaattattaacggtgtcagcgtatcagtgttcg-tgt-tgtgtccgtatccgtact 110  Q
    ||||||||| ||||||||| |||||||||||||||| |||| ||||||||| |  |||||| |||||| ||||| || |||  |||||||||||||| ||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttttttcaaattatcaggggtgtcggcgtattagtgtccgatgtccgtgtccgtatccgtgct 7027202  T
Q  111 tcatatt 117  Q
    |||||||    
T  7027201 tcatatt 7027195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 20371110 - 20371188
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||| ||||||||| ||| ||| |||||||||||| ||||||||||| ||||||| |||| ||| ||| |||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgt 20371188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 5462733 - 5462684
Alignment:
Q  26 atataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  5462733 atataattacaatgaattatgtgattttctcaaattattaacggtgtcag 5462684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 7723245 - 7723322
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||||||||||||||||||| |  ||||||||| ||||||| ||||||||||| | |||||  ||| |||||||    
T  7723245 cgacacgacaccgatacatataattatgctgaattatatgattttctcaaattattagcagtgtccacgtgtcagtgt 7723322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 9617494 - 9617437
Alignment:
Q  13 acgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggt 70  Q
    |||||||||| ||||||||| ||| |||||||||||||||| ||||||||||| ||||    
T  9617494 acgacaccgacacatataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 9629442 - 9629357
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc 99  Q
    ||||||||| ||||||||| ||| |||||||||||||||| ||||||||||  ||||||| |||| ||| | | ||||| ||||||    
T  9629442 cgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 1532289 - 1532241
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||||    
T  1532289 acatataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 13360373 - 13360457
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc 99  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||||| ||  ||||||  ||| || |||||||| | ||||||    
T  13360373 gacaccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgtcgacgtgtctgtgttcgtatcgtgtcc 13360457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 19044527 - 19044451
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||| |||||||| ||||||||| ||||||||||||||||| || |||||||||||   ||||| |||| |||||||    
T  19044527 gacatgacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgt 19044451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 31579239 - 31579283
Alignment:
Q  28 ataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||    
T  31579239 ataattacactgaattatgtgattttctcaaattattaacggtgt 31579283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 7086858 - 7086803
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||| ||||||| ||||||||| ||||| |||||||||||||| |||||||||||    
T  7086858 gacactacaccgacacatataattacactaaattatgtgattttctcaaattatta 7086803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 7378038 - 7377979
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||||| ||||||||| ||| |||||||||||||||| ||||||| ||| |||||||    
T  7378038 cgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtc 7377979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 10339120 - 10339211
Alignment:
Q  9 cgacacgacaccgatacatataatga-cactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc 99  Q
    ||||||| ||| || ||||||||| | ||||||||||||||||||| |||||||| |  ||||||| |||| ||||||||| ||| ||||||    
T  10339120 cgacacggcactgacacatataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgtcc 10339211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 31959203 - 31959124
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgta 108  Q
    |||| |||||| ||||||||||||| ||||||||||| | ||| | |||| |||||||||||||  ||||||| ||||||    
T  31959203 taattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtcatgtccgtgtccgta 31959124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 9195751 - 9195805
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||| ||||||||| ||||| |||||||| ||||| |||||||||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcattttctcaaattatta 9195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 13851794 - 13851712
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgt 97  Q
    |||| ||| ||||||||| ||||||||||| || ||||| ||||||||||| |||||||  ||| ||||||| ||||| ||||    
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 16833365 - 16833267
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcat 114  Q
    ||||||| || | |||| |||||||| ||||||||||| |||||||||||   ||||| |||| |||||||  |||| ||||||||||| || ||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccgtatcagtgcttcat 16833267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 34595193 - 34595107
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||| || | |||| |||||||||||||||||||| |||||||||||   ||||| |||| ||| ||| ||||| |||||||    
T  34595193 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccg 34595107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 7151473 - 7151420
Alignment:
Q  12 cacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||| | ||||||||| ||||| |||||||||||||| |||||||||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgattttttcaaattatta 7151420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 7938174 - 7938089
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||| || |||||| ||||| |||||| ||||||| ||||||||||| | ||||| |||| ||||||| | ||| |||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccg 7938089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 8365514 - 8365603
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtc 98  Q
    |||||||||||||| || | |||| |||| |||||||||||| || |||||||||||   ||||| |||| ||||||| ||||| |||||    
T  8365514 cgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtc 8365603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 26178683 - 26178732
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||| |||||| || ||||| ||||||||||||||||||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattatta 26178732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 30866149 - 30866202
Alignment:
Q  19 ccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    |||| ||||||||| ||| |||||||||||||||| ||||||||||| ||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 32511666 - 32511727
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    ||||||| | || |||||| |||||||||||||||||||| | ||||||||| |||||||||    
T  32511666 cgacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgtcag 32511727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 5970123 - 5970167
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||| |||||||||||||||||||| ||||||||||||| |||||    
T  5970123 taattacactgaattatgtgattttttcaaattattaactgtgtc 5970167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 7996378 - 7996450
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||||  |||||||| |||||||||||| ||||||| ||||||||||| | ||||| || | |||||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgt 7996450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 8022423 - 8022351
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||||  |||||||| |||||||||||| ||||||| ||||||||||| | ||||| || | |||||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgt 8022351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 8776988 - 8777060
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgt 101  Q
    |||| |||||||||| ||||||||| |||||||||||   ||||| |||| ||||||| ||||| ||||||||    
T  8776988 taattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgt 8777060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 21924935 - 21924999
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||| ||||||||| |||||||||||| |||| || ||||||||||| | ||||| ||||    
T  21924935 cgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcggcgt 21924999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 28862184 - 28862116
Alignment:
Q  11 acacgacaccgatacatataatgacactgaatt-atgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||||||||||| |||||| || |||||||||| |||| ||||||||||||||||| || |||| ||||    
T  28862184 acacgacaccgacacatatgattacactgaattaatgtcattttatcaaattattatcgatgtcggcgt 28862116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 6665277 - 6665206
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtat 80  Q
    |||||||| ||||| ||| ||||| || ||||||||||||||||  ||||||||||| |||| || ||||||    
T  6665277 cgacacgataccgacacaaataattactctgaattatgtgatttactcaaattattagcggtttcggcgtat 6665206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 17841604 - 17841667
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||| ||||| |||||||||||||| ||||||||||| | ||||| |||| ||||||| |||||    
T  17841604 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 17841667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 19147905 - 19147842
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||||||||| ||||||||| || ||||  ||| ||||||| | |||||||||||||||||    
T  19147905 gacacgacaccgacacatataattactctgatctatatgattttcttaaattattaacggtgtc 19147842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 25038086 - 25038141
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagt 84  Q
    |||| ||||| |||||||| ||||| |||||||||||||||||||| ||| |||||    
T  25038086 taattacactaaattatgtaattttctcaaattattaacggtgtcaacgtgtcagt 25038141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 7977830 - 7977900
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagt 84  Q
    ||||||||| || | |||| |||||||||||||| ||||| ||||||||||| | ||||| |||| |||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagt 7977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 10842581 - 10842527
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||||| || ||||| |||||||||||||| ||||||||||| ||||||| ||||    
T  10842581 acatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgt 10842527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 13815506 - 13815440
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    |||||||||||||| ||||||||   || |||||||||||||||| ||||| ||||| || ||||||    
T  13815506 cgacacgacaccgagacatataacttcattgaattatgtgattttctcaaaatattatcgatgtcag 13815440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 24138488 - 24138434
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||| ||||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  24138488 acacaacaccgatacatataaatacacttaattatatgattttttcaaattatta 24138434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 28152157 - 28152080
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||| || | |||| |||||||||||||||||||| ||||||||||| |  |||| |||| ||||||| |||||    
T  28152157 cgacaccgacacttgtaattacactgaattatgtgatttt-tcaaattattagctttgtcggcgtgtcagtgtccgtgt 28152080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 31384982 - 31384928
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||| || || | |||| |||||||||||||||||||| |||||||||||    
T  31384982 acacgacactgacacttgtaattacactgaattatgtgattttttcaaattatta 31384928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 34447378 - 34447416
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgt 72  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  34447378 acactaaattatatgattttatcaaattattaacggtgt 34447416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 8931597 - 8931666
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||||||||| ||| ||||||||| | |||||||||||| ||||| ||||||| ||| | ||||| ||||    
T  8931597 cgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggcgt 8931666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 10294169 - 10294080
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||||| ||||||||| ||| |||| |||| |||| | ||||||||||| |||| || || | ||||| | ||||| |||||||    
T  10294169 acacgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtccg 10294080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 10649358 - 10649309
Alignment:
Q  43 tatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||| |||||||||||||| |||||||||| |||||||| |||| ||||    
T  10649358 tatgtaattttatcaaattactaacggtgtcggcgtatcattgtttgtgt 10649309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 11591880 - 11591917
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaatt 61  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  11591880 acatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 14155239 - 14155300
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    ||||||| | |||| |||| |||||| ||||||||||||| ||||||||| | |||||||||    
T  14155239 cgacaccaacacatgtaatcacactgtattatgtgattttctcaaattatgatcggtgtcag 14155300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 16388246 - 16388283
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattatt 64  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  16388246 tataattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 28715354 - 28715293
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    ||||||||| || | |||| |||||||||||||| ||||| ||||||||||| | |||||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtcag 28715293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 33340414 - 33340471
Alignment:
Q  43 tatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||||| | ||||||| ||||||||| |||| || ||||| ||||||||||||    
T  33340414 tatgtgatttttttaaattatcaacggtgtcggcgtgtctgtgtttgtgttgtgtccg 33340471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 35125684 - 35125627
Alignment:
Q  43 tatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||||| | ||||||| ||||||||| |||| || ||||| ||||||||||||    
T  35125684 tatgtgatttttttaaattatcaacggtgtcggcgtgtctgtgtttgtgttgtgtccg 35125627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 677900 - 677824
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||||| |  |||||||  |||||  ||||| ||||||| ||||||||||||| ||||| |||| |||||||    
T  677900 gacacgacaccaacgcatataaatacactatattatatgattttctcaaattattaacagtgtcggcgtgtcagtgt 677824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 9522955 - 9522899
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||| ||||||| || | |||| |||||||||||||||||||| | |||||||||    
T  9522955 cgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 9522899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 16488585 - 16488629
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgatttt 53  Q
    |||||||||||||| ||||||||| |||||| ||| |||||||||    
T  16488585 cgacacgacaccgacacatataattacactgcattttgtgatttt 16488629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 17302601 - 17302537
Alignment:
Q  29 taatgacactgaattatgtgattttat-caaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||| ||| |||||||||||||||| | ||||||||||   |||||||||| |||||||||||||    
T  17302601 taattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgttcgtgt 17302537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 18367900 - 18367856
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgatttt 53  Q
    |||||||||||||| ||||||||| |||||| ||| |||||||||    
T  18367900 cgacacgacaccgacacatataattacactgcattttgtgatttt 18367856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 32839668 - 32839708
Alignment:
Q  36 actgaattatgtgattttatcaaattattaacggtgtcagc 76  Q
    |||| ||||||||||||| ||||||||||||| ||||||||    
T  32839668 actggattatgtgattttctcaaattattaacagtgtcagc 32839708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 8e-22; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 11927083 - 11927152
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtat 80  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgtat 11927152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 11803321 - 11803235
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgt 97  Q
    |||| ||||| | ||||||||| |||||||||||||||||||| | ||||||||||| ||||||| |||||||||||||||| ||||    
T  11803321 acacaacaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtcagtgtatcagtgttcgtgtcgtgt 11803235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 11944727 - 11944660
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| ||||| ||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgt 11944660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 108
Target Start/End: Complemental strand, 24669492 - 24669398
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgta 108  Q
    ||||||||| || | |||| |||||||||||||| ||||  |||||||||||||||||||||||| |||||||  |||| |||||||| ||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtccgtgtccgta 24669398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 4786338 - 4786410
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||| ||||||||| |||||||||||||||||||| | |||||||||| |||||| |||| |||||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgt 4786410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 20873128 - 20873027
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttca 113  Q
    ||||||||| || | |||| ||||| |||||||||||||| ||||||||||| |  |||| |||| ||||||| ||||| |||||||||| ||| |||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccgtattcgtgcttca 20873029  T
Q  114 ta 115  Q
    ||    
T  20873028 ta 20873027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 22652040 - 22651949
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||||||| || | |||| | | |||||||||||||||| ||||||||||| | ||||| |||| ||||||| ||||| |||||||    
T  22652040 cgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 22651949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 34897144 - 34897085
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||| ||| ||||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  34897144 cgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtc 34897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 25172694 - 25172768
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagt 84  Q
    ||||||||||||| ||||||||| ||| | || ||||| ||||||||||||||||| | |||||||| |||||||    
T  25172694 gacacgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcagcatatcagt 25172768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 33405384 - 33405486
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc-gtatccgtacttc 112  Q
    ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||| | | ||| || ||||||| | ||| |||||| || ||||||||||    
T  33405384 cgacaccgacacatataattacactaaattatgtgtttttctcaaattattaacagggccagtgtgtcagtgtccatgtcgtgtccagtgtccgtacttc 33405483  T
Q  113 ata 115  Q
    |||    
T  33405484 ata 33405486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 24362197 - 24362266
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||||  || ||||||||| |||||||||||||||||| | ||||||||||| ||||||| ||||    
T  24362197 cgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgt 24362266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 4611590 - 4611534
Alignment:
Q  17 caccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||| ||||||||| |||||||||||||| ||||| ||||||||||| |||||||    
T  4611590 caccgagacatataattacactgaattatgttattttctcaaattattagcggtgtc 4611534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 13844596 - 13844660
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||| ||||||||| ||||| |||||||||||||| ||||||||||| | ||||| ||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgt 13844660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 25566903 - 25566839
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    |||||||||||| || | |||| |||||||||||||||||||| ||||||||||| | |||||||    
T  25566903 acacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcag 25566839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 15816126 - 15816201
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||||||| || |||||| ||||| |||||||||||||| |||||||||||   ||||| |||| |||||||    
T  15816126 acacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 15816201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 28384990 - 28385053
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||| |||||||| ||||||||| ||||||||||||| |||||  ||| |||||||||||||||    
T  28384990 gacatgacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtc 28385053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 29510299 - 29510390
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||| ||||||| || | |||| | |||||||| ||||||||| ||||||||||| | ||||| |||| ||||||| ||||| |||||||    
T  29510299 cgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 29510390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 13018338 - 13018284
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattattaacggt 70  Q
    |||||||| ||||| || ||||| |||||||||||||| ||||||||||||||||    
T  13018338 acaccgattcatatcattacactaaattatgtgattttgtcaaattattaacggt 13018284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 14134757 - 14134707
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||| | ||||||| |||||||||||||||||||| |||||||||||    
T  14134757 gacaccgacatatataattacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 31109518 - 31109596
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||||| || ||||||| | | |||||||| | ||||||| ||||||||||||||||||| |||| ||||||| |||||    
T  31109518 cgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtgt 31109596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 31557054 - 31556985
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtg 85  Q
    |||||||| || | |||| |||||||||||||||||||| ||||||||||||| ||||| |||| ||||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtgatttt-tcaaattattaactgtgtcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 39954289 - 39954343
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||| ||||| |||||||||||||| ||||||||||| ||||||| ||||    
T  39954289 acatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgt 39954343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 7658520 - 7658455
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatc 81  Q
    ||||||| | ||||||| |||||||||||||| ||||| |||||||||||  |||||| |||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgtcggcgtatc 7658455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 18067953 - 18067994
Alignment:
Q  33 gacactgaattatgtgattttatcaaattattaacggtgtca 74  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  18067953 gacactgaattatgtgattttctcaaattattagcggtgtca 18067994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 31236580 - 31236641
Alignment:
Q  17 caccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||||| ||||||||| ||| |||||||||||||||| ||||||||||| | ||||| ||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgt 31236641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 16641969 - 16642025
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||||| |||||||| |||||| |||||||||  ||| |||||||||||    
T  16641969 cgacacgacaccgacacatataacgacactaaattatgtgtatttctcaaattatta 16642025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 26902174 - 26902214
Alignment:
Q  13 acgacaccgatacatataatgacactgaattatgtgatttt 53  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  26902174 acgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 34223011 - 34222955
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||| | ||||| ||||||||| ||||| |||||||||||||||| |||||||||    
T  34223011 cgacaccataccgacacatataattacacttaattatgtgattttattaaattatta 34222955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 2572052 - 2572107
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||||||| || | |||| ||||| |||||||||||||| |||||||||||    
T  2572052 gacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 2572107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 3025610 - 3025559
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||| || || |||||| |||||||||||||||||||| |||||||||||    
T  3025610 cgacactgacacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 4948711 - 4948660
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||| || | |||| |||||||||||||||||||| |||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 4948660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 41831960 - 41831999
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  41831960 acactgaattatgtgattttttcaaattattaactgtgtc 41831999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 3677843 - 3677793
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattattaa 66  Q
    ||||||||||||||||| |||  ||||||||||||||| | ||||||||||    
T  3677843 acaccgatacatataattacatagaattatgtgattttttaaaattattaa 3677793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 8847315 - 8847277
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattt 52  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  8847315 cgacaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 12606830 - 12606880
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||| ||||||||| ||| |||||||| ||||||| |||||||||||    
T  12606830 gacaccgacacatataattacattgaattatatgattttctcaaattatta 12606880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 20679396 - 20679446
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||| || |||||| |||||||| ||||||||||| |||||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattatta 20679446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 4673426 - 4673511
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||| ||||| | |||| |||||||||| | ||||||| ||||||||||| | ||||| |||| |||||||  |||| |||||||    
T  4673426 gacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccg 4673511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 13436959 - 13437036
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||||||||| || | | || ||  |||||||||||||||| ||||||||||| | ||||| |||| |||||||    
T  13436959 cgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 13437036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 14731761 - 14731720
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||| ||||| |||||||||||||| |||||||||||    
T  14731761 acatataattacactaaattatgtgattttctcaaattatta 14731720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 22596038 - 22595951
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt--tgtgtccgtatccgtacttcata 115  Q
    |||| |||||||||||||| ||||| | ||||||||| | ||||| |||| |||||||| ||||   |||||||||||||| |||||||    
T  22596038 taattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgtt-gtgtccggtgtccgtatccgtgcttcata 22595951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 27213601 - 27213520
Alignment:
Q  19 ccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||| ||||||||| ||| |||||||||||||||| | ||||||||| | ||||| |||| || || | ||||| |||||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccg 27213520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 28383827 - 28383888
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    ||||||||| || |||| |||| ||| | ||||| ||||||||||||||||||||| |||||    
T  28383827 acacgacactgacacatgtaataacaataaattacgtgattttatcaaattattaatggtgt 28383888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 33382020 - 33382077
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    |||||||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||||    
T  33382020 gacaccgacacatataattactctgaattatgtcattttcttaaattattatcggtgt 33382077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 36934719 - 36934670
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||||| ||| |||||||||||||||| || |||||||| |||||||    
T  36934719 acatataattacaatgaattatgtgattttttcgaattattagcggtgtc 36934670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 8343032 - 8342980
Alignment:
Q  13 acgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||| || | |||| ||||| |||||||||||||| |||||||||||    
T  8343032 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 8342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 13203688 - 13203616
Alignment:
Q  26 atataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtc 98  Q
    ||||||| |||||||||||||| ||||| |||||||||||  | |||   |||||||||||| |||| |||||    
T  13203688 atataattacactgaattatgtaattttctcaaattattagtgttgttgacgtatcagtgtttgtgtcgtgtc 13203616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 29776085 - 29775993
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcatat 116  Q
    ||||||||| | ||||||||| |||||||| ||||||||||| | |||||  | | ||| ||| ||||| ||| |||||| ||| ||||||||    
T  29776085 acatataattatactgaattacgtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtgaccgtattcgtgcttcatat 29775993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 34451032 - 34451076
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgatttt 53  Q
    |||||||||||||| ||||||||| |||||| ||| |||||||||    
T  34451032 cgacacgacaccgacacatataattacactgcattttgtgatttt 34451076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 37283824 - 37283888
Alignment:
Q  28 ataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||| |||||||||||||||||||| ||| ||||||| ||||| | || | ||||||| |||||    
T  37283824 ataattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtgt 37283888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 40332248 - 40332200
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattatt 64  Q
    ||||||| || | |||| |||||||||||||||||||| ||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 15902886 - 15902779
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgta 108  Q
    |||||| ||||||| ||||||||| ||||| ||||||||||||||||||||||||||  |||||| || | |||||||  |||| |||||||||| |||     
T  15902886 cgacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtccgtattcgtg 15902787  T
Q  109 cttcatat 116  Q
    ||||||||    
T  15902786 cttcatat 15902779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 22602705 - 22602781
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtg 85  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| |||||| ||| |||||||| |||| ||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtg 22602781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 32308184 - 32308107
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||||| || ||||| ||| |||||||||||||||||||| ||||||||||| ||||||| |||| |||||||    
T  32308184 cgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 32308107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 1433518 - 1433430
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgt 97  Q
    |||||||||||||| ||||||||| ||||  ||| |||||||||| ||||||||||||||||||| |||| ||| ||| ||||| ||||    
T  1433518 cgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgt 1433430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 26329377 - 26329467
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc 99  Q
    ||||||||| |||| ||||||||| |||||||||| |||| |||| |||||||||||||| |||| |||| |||||||  |||| ||||||    
T  26329377 cgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtcc 26329467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 27945104 - 27945014
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||||||| || | |||| |||||||||||||| ||||| |||||||||||  |||||| |||| ||||||| ||||| |||||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccg 27945014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 22868091 - 22868014
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgt 101  Q
    ||||||||| |||||||||||||||||||| ||| |||||||  |||||| |||| |||||||  |||||||||||||    
T  22868091 acatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgtccgt 22868014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 1401083 - 1401007
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtg 91  Q
    ||||||||||| |||||| |||||||||||||||| ||| ||||||||||| || | ||||||| ||||||| ||||    
T  1401083 gacaccgatacttataattacactgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtgtccgtg 1401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 20549850 - 20549778
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||| ||||||||| ||||||||||| |||||||| ||||||||||| ||||||| | || |||||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 26733363 - 26733279
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtc 98  Q
    ||||||||| |||| |||| | |||||||||||||||||| ||||||||||| |||||||  ||| ||||||| ||||| |||||    
T  26733363 cgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 5835305 - 5835234
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||| ||||||||| |||||||||||||| ||||| ||||| |||||  |||||| ||||||||||||    
T  5835305 gacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgt 5835234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 13770755 - 13770664
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||| ||| || | |||| |||||||||||||| ||||| | ||||||||| | ||||| |||||||||||| ||||| |||||||    
T  13770755 cgacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 13770664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 23191954 - 23191883
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||| || |||| |||| |||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||    
T  23191954 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgt 23191883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 24339706 - 24339615
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||||||| || | |||| |||||||||||||||||||| ||||||||||| | ||||| |||| ||| ||| | ||| |||||||    
T  24339706 cgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccg 24339615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 11700848 - 11700798
Alignment:
Q  28 ataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||| ||| |||||||||||||||| ||||||||||||||||||||||||    
T  11700848 ataattacattgaattatgtgattttgtcaaattattaacggtgtcagcgt 11700798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 5409831 - 5409908
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||||||||| || | ||||  ||||||||||||||||||| ||||||||||| | || ||||||| |||||||    
T  5409831 cgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgt 5409908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 29787383 - 29787456
Alignment:
Q  28 ataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgt 101  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||||| |||| | | ||| |||||||| |||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtgttgtatccgt 29787456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 49107882 - 49107786
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgta 108  Q
    |||||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||| ||||||| | || |||| || ||||| |||||| | ||||||    
T  49107882 acacgacaccgacacatataatcacactcaattatgtg-ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtccttgtccgta 49107786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 5548740 - 5548676
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||||||| || ||||||||| |||||||||||| ||||||| ||||||||| | |||||||    
T  5548740 cgacacgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtc 5548676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 7328686 - 7328742
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||||| ||||||||| ||||| |||||||| ||||| |||||||||||    
T  7328686 cgacacgacaccgacacatataattacactaaattatgttattttctcaaattatta 7328742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 11722121 - 11722197
Alignment:
Q  37 ctgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc-gtatccgtacttc 112  Q
    ||||||||||||||||| ||||||| ||| ||||||| |||| ||||||| ||||| |||||| |||||||| ||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgcttc 11722197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 16341560 - 16341504
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||||  ||||||||| ||||| |||||||||||||| |||||||||||    
T  16341560 cgacacgacaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 6630909 - 6630984
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||| ||| ||||||||| ||||||||||| |||| ||| |||||||||||  |||||| |||| |||||||    
T  6630909 acacgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgt 6630984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 19206108 - 19206045
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||||||| ||||||||| | | |||||||||||||||| ||||||||||| ||||||| ||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgt 19206045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 21828401 - 21828484
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgtt 93  Q
    ||||| |||| || ||||| ||| ||| || ||||||||||||| |||||||| |||||||||| |||| ||||||| ||||||    
T  21828401 gacacaacactgacacatacaattacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgtccgtgtt 21828484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 24105722 - 24105643
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgta 108  Q
    |||| ||||||||| |||  ||||| ||||||||||| | ||||| |||| ||||||| ||||| |||||||||||||||    
T  24105722 taattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgtatccgta 24105643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 25481946 - 25481875
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||| |||||||||||||||||||| ||||||||||| | ||||| |||| ||| ||| | |||||||||||    
T  25481946 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccg 25481875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 42720891 - 42720962
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||| || ||||||||| ||| | |||||||||||||| ||||||||||| |||||||| ||| |||||||    
T  42720891 gacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtgt 42720962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 7438770 - 7438692
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgtt 87  Q
    ||||| |||||||| || | |||| ||| |||||||||||||||| ||||||||||||| ||||| || | ||||||||    
T  7438770 cgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgtt 7438692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 27229307 - 27229360
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatt 64  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||| |||||||||    
T  27229307 gacacgacaccgatacttataattacactaaattatgtgatttta-caaattatt 27229360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 3520345 - 3520406
Alignment:
Q  17 caccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||||| ||||||||| ||| |||||||| ||||||| |||||| |||| ||||||||||||    
T  3520345 caccgacacatataattacattgaattatatgattttctcaaatgattatcggtgtcagcgt 3520406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 5236049 - 5235960
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc 99  Q
    ||||||||||||||| ||||||| ||||| |||||| | ||||| | ||||||||| |||||||  ||| |||||||  |||| ||||||    
T  5236049 gacacgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtcc 5235960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 12289152 - 12289071
Alignment:
Q  35 cactgaattatgtgattttatcaaattattaacggt-gtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcata 115  Q
    ||||||||||||||||||| ||||||||||| | || | | |||| || |||| ||||||||||| |||||||| |||||||    
T  12289152 cactgaattatgtgattttctcaaattattagcagtggccggcgtgtcggtgtccgtgttgtgtctgtatccgtgcttcata 12289071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 17307957 - 17307904
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaatta 62  Q
    |||||||||||| | ||||||||| |||||||||||||| ||||| ||||||||    
T  17307957 cgacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 19992061 - 19992009
Alignment:
Q  13 acgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||| || |||||| |||||||| ||||||||||| |||||||||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgattttctcaaattatta 19992009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 22484083 - 22483984
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcat 114  Q
    |||||||| ||||||||| | |||||||||||  ||||| | ||||||||| ||||||| |||| |||||||  |||| | ||  |||||||||||||||    
T  22484083 gacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtcg-gtgtgtatccgtacttcat 22483985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 26033456 - 26033512
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||| ||||| || | |||| |||||||||||||||||||| |||||||||||    
T  26033456 cgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattatta 26033512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 27732243 - 27732299
Alignment:
Q  18 accgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtca 74  Q
    ||||| ||||||||| |||||||||||||| ||||| | |||||||||||| |||||    
T  27732243 accgacacatataattacactgaattatgtaattttcttaaattattaacgttgtca 27732299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 2425736 - 2425803
Alignment:
Q  17 caccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagt 84  Q
    |||||| ||||||| |  |||| |||||||||||||| ||||||||||||||||| | |||| |||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagt 2425803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 3721152 - 3721101
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||| ||||||||| | ||| |||||||||||||| |||||||||||    
T  3721152 cgacaccgacacatataattatactaaattatgtgattttctcaaattatta 3721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 7758386 - 7758315
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtat 80  Q
    |||||||||||||| ||| ||||| | |||||||||| | ||||| | |||||||||  |||||||||||||    
T  7758386 cgacacgacaccgacacacataattatactgaattatataattttctaaaattattagtggtgtcagcgtat 7758315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 18013070 - 18013125
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||| || ||||||||| |||||||||||||| ||||| | |||||||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttttaaattatta 18013125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 23128658 - 23128725
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||| ||||||| |||||| || |||||||||||| || |||| |||||||||||  |||||||||||    
T  23128658 acacaacaccgacacatatgattacactgaattatatggttttctcaaattattattggtgtcagcgt 23128725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 32287463 - 32287522
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||||| ||||||| |  ||||||||||||||||||| ||| ||||||| |||||||    
T  32287463 cgacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggtgtc 32287522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 35297669 - 35297724
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaa 66  Q
    |||||||||| | ||||||||| | | |||||||||||||||| ||||||||||||    
T  35297669 acacgacaccaacacatataattataatgaattatgtgattttctcaaattattaa 35297724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 4008568 - 4008634
Alignment:
Q  18 accgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagt 84  Q
    ||||| ||||| ||| ||| ||||| |||| |||||||||||||||||| |||||| |||| |||||    
T  4008568 accgacacatacaattacattgaatcatgtaattttatcaaattattaaaggtgtctgcgtgtcagt 4008634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 4013960 - 4014026
Alignment:
Q  18 accgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagt 84  Q
    ||||| ||||| ||| ||| ||||| |||| |||||||||||||||||| |||||| |||| |||||    
T  4013960 accgacacatacaattacattgaatcatgtaattttatcaaattattaaaggtgtctgcgtgtcagt 4014026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 9778564 - 9778510
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattat 63  Q
    |||||||||||||| || | |||| | |||||||||||||||||| |||||||||    
T  9778564 cgacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattat 9778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 11890914 - 11890972
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaac 67  Q
    |||||||||||| | ||  ||||| |||||||||||| ||||||| |||||||||||||    
T  11890914 cgacacgacacctacactcataattacactgaattatatgattttttcaaattattaac 11890972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 12843171 - 12843225
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatt 64  Q
    |||||||||| || |||| |||| ||| |||||||||| ||||||||||||||||    
T  12843171 gacacgacactgacacatgtaattacattgaattatgtaattttatcaaattatt 12843225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 17851480 - 17851434
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggt 70  Q
    ||||||||| |||||||||||||||||||| | ||||||||| ||||    
T  17851480 acatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 19930937 - 19930991
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatt 64  Q
    ||||||| | ||| ||||||||| ||| |||||||||| ||||||||||||||||    
T  19930937 gacacgatatcgacacatataattacattgaattatgtcattttatcaaattatt 19930991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 640171 - 640134
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattt 52  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  640171 gacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 2424659 - 2424622
Alignment:
Q  28 ataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattatta 2424622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 5233692 - 5233635
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaac 67  Q
    ||||| ||||| | ||||||||| |||||  ||||||||||||| |||||||||||||    
T  5233692 gacacaacaccaacacatataattacactagattatgtgattttctcaaattattaac 5233635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 9408333 - 9408386
Alignment:
Q  13 acgacaccgatacatataatgacactgaattatgtgattttatcaaattattaa 66  Q
    |||||||||| || | |||| ||||| |||||||||||||| ||||||||||||    
T  9408333 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaa 9408386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 10042999 - 10042918
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||| || || |||||| || || |||||||||| |||||||||||||||  |||||| |||| | ||||| |||||    
T  10042999 acacgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgt 10042918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 11665435 - 11665504
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||| |||| ||| || |||||| | |||||||||||||||||| |||||||||||   ||||||||||    
T  11665435 cgacatgacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgt 11665504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 18039063 - 18039006
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtga-ttttatcaaattatta 65  Q
    |||||||||||||| || | |||| |||||||||||||||| |||| |||||||||||    
T  18039063 cgacacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 21880211 - 21880130
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgt 95  Q
    ||||||||| || | |||| |||||||||||||| ||||| ||||||||||| || ||||  | | | ||||||||||||||    
T  21880211 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtccacatgttagtgttcgtgttgt 21880130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 27093415 - 27093472
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||||  |||||||| ||||| |||||||||||||| | ||||||||| |||||||    
T  27093415 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtc 27093472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 27184886 - 27184829
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||||  |||||||| ||||| |||||||||||||| | ||||||||| |||||||    
T  27184886 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtc 27184829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 43027465 - 43027554
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc 99  Q
    ||||||||||||| || | || | |||||| ||||||||||||| ||||||||||| | | |||  ||| ||||||| ||||| ||||||    
T  43027465 gacacgacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtcc 43027554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 43250039 - 43249974
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||||| |||||| ||||||| ||||| ||||||||||| | ||||| |||| ||||||| |||||    
T  43250039 tataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgt 43249974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 3991384 - 3991332
Alignment:
Q  13 acgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||| || | |||| | |||||||||||||||||| |||||||||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtgattttttcaaattatta 3991332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 21138991 - 21139051
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    |||||||||||||| ||||||||| ||| | |||||||  ||||| ||||||||||||||||||    
T  21138991 cgacacgacaccgacacatataattacagt-aattatg--attttctcaaattattaacggtgt 21139051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 23784425 - 23784341
Alignment:
Q  8 gcgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||||||||||  || |||||| || ||||| |||||  ||||||||||||||| |||||| ||||  ||| ||| |||||||||    
T  23784425 gcgacacgacattgacacatatcataacactaaattagatgattttatcaaatttttaacgttgtcgacgtgtcaatgttcgtgt 23784341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 28155629 - 28155565
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||| || | |||| |||| ||||||||| ||||| ||||||||||| ||||||| ||||    
T  28155629 cgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgt 28155565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 30731076 - 30731032
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||||||||||||||||||| ||||||||||  ||||||| ||||    
T  30731076 acactgaattatgtgattttctcaaattattcgcggtgtcggcgt 30731032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 33384577 - 33384641
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||| ||||| | ||||||||| ||||| ||||||  |||||| ||| |||||||||||||||    
T  33384577 cgacaccacaccaacacatataattacactaaattataggattttctcagattattaacggtgtc 33384641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 38134410 - 38134466
Alignment:
Q  18 accgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtca 74  Q
    ||||| |||||| || ||| |||||||||| ||||| ||||||||||| ||||||||    
T  38134410 accgacacatatgattacattgaattatgtcattttctcaaattattatcggtgtca 38134466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 30404865 - 30404951
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcata 115  Q
    |||| |||||||||||||||||||| ||||||||||||| ||||| |||| ||||||| |||||  ||||||||||||| |||||||    
T  30404865 taattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccgtatccgtgcttcata 30404951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 44860382 - 44860318
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    |||||||||||| ||||||||| ||||||||||||| |||||| ||||||||||| |||||||||    
T  44860382 acacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtcag 44860318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 21616811 - 21616737
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtc 98  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||| || |||| ||||| |||||    
T  21616811 acatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 23718082 - 23717998
Alignment:
Q  17 caccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgt 101  Q
    |||||| ||||||||| |||||||||||||||| ||| ||||||||||| ||||||| | || ||||||| |||||  |||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccgt 23717998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 24105754 - 24105670
Alignment:
Q  17 caccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgt 101  Q
    |||||| ||||||||| |||||||||||||||| ||| ||||||||||| ||||||| | || ||||||| |||||  |||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccgt 24105670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 27286305 - 27286393
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcata 115  Q
    |||||| ||||| ||||||||||| |||||||||||||| || |||| |||||||||||| ||| | ||||| || ||||| |||||||    
T  27286305 tataattacacttaattatgtgatcttatcaaattattagcgttgtcggcgtatcagtgtccgtatcgtgtctgtgtccgtgcttcata 27286393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 28412395 - 28412351
Alignment:
Q  28 ataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgt 28412351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 28677967 - 28677904
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||| ||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||    
T  28677967 cgacaccga-acatataattacactgaattatgtgattttttcaaattattagcggtgtcggcgt 28677904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 34691805 - 34691861
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggt 70  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  34691805 cgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 34714217 - 34714273
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggt 70  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  34714217 cgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 18276579 - 18276508
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||| ||| ||||| ||||||||||| |||||||| ||||||||||| ||||||| || |||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgt 18276508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 21782832 - 21782903
Alignment:
Q  28 ataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc 99  Q
    ||||| |||||||||||||||||||| ||||||||||| | ||||| |||| |||||||| |||| ||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtcc 21782903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 32199141 - 32199212
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||| |||||||||||| | ||| |||||||||||||||||||||||||||| ||| |||| | |||||||    
T  32199141 gacactgatacatataattatacttaattatgtgattttatcaaattattaactgtgacagcatgtcagtgt 32199212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 35449562 - 35449471
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcata 115  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||| ||||  || | |||||||| |||| |||| ||||| ||| |||||||    
T  35449562 acatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgtttgtgtcgtgttcgtattcgtgcttcata 35449471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 37411244 - 37411303
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||| ||| ||||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  37411244 cgacatcgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtc 37411303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 12668418 - 12668474
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||||| || |||||| |||||||||||||| ||||| |||||||||||    
T  12668418 cgacacgacaccgacacttataattacactgaattatgtcattttttcaaattatta 12668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 16069268 - 16069332
Alignment:
Q  28 ataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||| |||||||||||| ||||||| | ||||||||||||||||| |||| ||||||| |||||    
T  16069268 ataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgt 16069332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 18841014 - 18841114
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcat 114  Q
    |||||||| || | |||| ||||| |||||||| ||||| |||||||||||   |||||||||| ||||||| | ||| |||||||||| ||| ||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtccatgtcgtgtccgtatacgtgcttcat 18841113  T
Q  115 a 115  Q
    |    
T  18841114 a 18841114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 30527589 - 30527653
Alignment:
Q  8 gcgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    ||||||||| ||||| ||||||||| ||||| |||||| ||||||| ||||||||||||| ||||    
T  30527589 gcgacacgataccgacacatataattacactaaattatatgattttctcaaattattaacagtgt 30527653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 39279732 - 39279676
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    ||||||| ||||||||| |||||||||||| ||||||| ||| ||||||||||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattattaacggtgt 39279676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 2438719 - 2438803
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||| || | |||| |||||||||||||||||||| | ||||||||| | |||||||||  ||||||| |||||| ||||||    
T  2438719 cgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtcagcg--tcagtgtccgtgttttgtccg 2438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 5367251 - 5367200
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||| ||||||||| |||||||||||||||||||  |||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 18622669 - 18622614
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||||| | || |||||| |||||||||||||||||||||| |||||||||    
T  18622669 gacacgacaccaacacgtataattacactgaattatgtgattttattaaattatta 18622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 2331855 - 2331795
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||| |||||||||||| |||||    
T  2331855 gacacgacaccgacacata-aat-acactgaattatgtgattttctcaaattattaatggtgt 2331795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 12940950 - 12941028
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgt 107  Q
    |||| |||||||||||| ||||||| |||||||||||   |||||| ||| ||||||| ||||| ||||| ||||||||    
T  12940950 taattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtctgtatccgt 12941028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 31808126 - 31808064
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||| |||||||||||||||||||| | ||||||||| ||||||| | || |||||||    
T  31808126 acatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgt 31808064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 38355888 - 38355933
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaat 60  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||    
T  38355888 gacaccgacacatataatcacactgaattatgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 19959850 - 19959810
Alignment:
Q  38 tgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  19959850 tgaattatgtgattttgtcaaattattaacgatgtcagcgt 19959810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 23921312 - 23921256
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggt 70  Q
    ||||||| |||  |||||| |||||||||||||| ||||| ||||||||||||||||    
T  23921312 cgacaccaatatttataattacactgaattatgtaattttctcaaattattaacggt 23921256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 25080946 - 25080870
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtat 103  Q
    |||||| ||||||| ||||||||| |||||||||||||| ||||| | |||| | |||||  || ||||||||||||    
T  25080946 tataattacactgacttatgtgatcttatcaaattattagcggtgccggcgtgttagtgtctgtattgtgtccgtat 25080870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 29970545 - 29970609
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtca 74  Q
    ||||||||| ||| |||||| || |||||||| |||| |||||| ||||||||||| ||||||||    
T  29970545 gacacgacatcgacacatatgattacactgaactatgcgattttctcaaattattagcggtgtca 29970609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 30717525 - 30717581
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||| ||| || | |||| |||||||||||||||||||| |||||||||||    
T  30717525 cgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattatta 30717581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 34784977 - 34785021
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgatttt 53  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||||    
T  34784977 cgacacgacaccgacacatataattacactaaattatgtgatttt 34785021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 36281748 - 36281688
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggt 70  Q
    ||||| ||| ||| |||||| || ||||| |||||||||||||| ||||||||||||||||    
T  36281748 gacaccacatcgaaacatatgattacactaaattatgtgattttctcaaattattaacggt 36281688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 20242727 - 20242766
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgatttt 53  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  20242727 cgacaccgacacatataattacactgaattatgtgatttt 20242766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 20539672 - 20539759
Alignment:
Q  12 cacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc 99  Q
    ||||||||||| || | |||| ||||| |||||| ||||||| ||||||||||| | |||||  ||| ||||||| ||||| ||||||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtcc 20539759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 24975321 - 24975384
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||||||||||  |||||| | ||||||||||||  |||||| ||||||||||| |||||||    
T  24975321 gacacgacaccgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtc 24975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 36409641 - 36409728
Alignment:
Q  28 ataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcata 115  Q
    ||||| ||||| |||||||||||||| ||||||||| | ||||||| || | | ||| | ||||| ||||| |||||||| |||||||    
T  36409641 ataattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtctgtatccgtgcttcata 36409728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 39323308 - 39323245
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||| |||||||||||||| ||||| ||||||||||| |||||||  ||| ||||||| |||||    
T  39323308 taattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtgt 39323245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 10535779 - 10535825
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtcagcgtat 80  Q
    |||||||||||||| ||||| ||||||||||| ||||||| ||||||    
T  10535779 acactgaattatgtcattttctcaaattattatcggtgtcggcgtat 10535825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 15972932 - 15972854
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||| || | |||| |||||||||| ||| ||||| ||||||||||||  ||||| |||| ||||||| |||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgt 15972854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 18422022 - 18421944
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||| || | |||| ||||||||||||||||| || | ||||||||||  ||||| |||| ||||||| |||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgt 18421944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 18889592 - 18889642
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||| |||||| || |||||||||||||||||||| |||| ||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttatta 18889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 22084852 - 22084890
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgt 72  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  22084852 acactgaattatatgattttctcaaattattaacggtgt 22084890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 36756341 - 36756395
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||| || |||||| |||||||||||||| ||||  |||||||||||    
T  36756341 acacgacaccgacacttataattacactgaattatgttatttcttcaaattatta 36756395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 37559036 - 37558958
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||| || | |||| ||| ||||||||||||||||  |||||||||| | ||||| |||| ||||||| |||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgt 37558958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 42832277 - 42832335
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||||| || |||||| |||||||| ||||| ||||| ||||||||||| |||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtc 42832335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 24894427 - 24894370
Alignment:
Q  35 cactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||||||||||||| | ||||||||| | ||||| |||| ||||||| |||||    
T  24894427 cactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 31284106 - 31284021
Alignment:
Q  16 acaccgatacata-taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||| ||||| |||| ||| || ||||||||||||| ||||||||||| | ||||| |||| | ||||| |||||| ||||||    
T  31284106 acaccgacacataataattacaatggattatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccg 31284021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 32355462 - 32355405
Alignment:
Q  38 tgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgt 95  Q
    |||||||| ||||||||||||||||||||| || || |||||| ||| | ||||||||    
T  32355462 tgaattatttgattttatcaaattattaacagtatcggcgtattagtatccgtgttgt 32355405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 35056932 - 35056883
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaa 58  Q
    |||||||||||||| ||||||||| |||||||||||| || |||| ||||    
T  35056932 cgacacgacaccgacacatataattacactgaattatatggttttctcaa 35056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 38117174 - 38117261
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt--tgtgtccgtatccgtacttcata 115  Q
    |||| |||| ||| ||||||||||| ||||||||||| | ||||| |||| |||||| ||||||   |||||||||||||| |||||||    
T  38117174 taattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtg-tcgtgtccggtgtccgtatccgtgcttcata 38117261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 10547933 - 10548008
Alignment:
Q  19 ccgatacatataatgacactgaattatgtgatttt--atcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||||||||||||  |||||||||||| |||||||   | |||||||||||||||||  ||| ||||||| |||||    
T  10547933 ccgatacatataactacactgaattatatgatttttatttaaattattaacggtgtcgacgtgtcagtgtccgtgt 10548008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 41942152 - 41942092
Alignment:
Q  26 atataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||| | |||||||||||| ||||| ||||||| ||||||||| | |||| |||||||    
T  41942152 atataattatactgaattatgtaattttctcaaatttttaacggtgactgcgtgtcagtgt 41942092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 22440610 - 22440693
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgt 107  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||   |||||||||| | ||| ||||| ||||||||    
T  22440610 acatataattacactgaattatgtgattttctcaaattattaacggtgtcgatgtatcagtgtccatgtcgtgtctgtatccgt 22440693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 35952608 - 35952668
Alignment:
Q  5 cacgcgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||||||    
T  35952608 cacgcgacacgacactgatacatataattacattgaattatatgattttatcaaattatta 35952668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 903974 - 903924
Alignment:
Q  21 gatacatataatgacactgaattatgtgattttatcaaattattaacggtg 71  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  903974 gatacatataattacactgaattatgtgattttctcaaattattaacggtg 903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 40179636 - 40179714
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||||||||  |||||||| |||||||||||||||||||| ||||| |||||| ||||||| ||| ||||||| |||||    
T  40179636 cgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgt 40179714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 5775353 - 5775417
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||| |||||||| ||||||||| ||||| |||||||||||||| |||||||||||| ||||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtc 5775417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 6863217 - 6863154
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    ||||| ||||||||||||||||||  ||| ||||||| ||||||| ||||||||||||||||||    
T  6863217 cgacatgacaccgatacatataattgcaccgaattatatgattttttcaaattattaacggtgt 6863154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 7012130 - 7012047
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||||| |||||||||| ||| || |||||||||||||| ||||| ||||||||||| ||||||| |||| || |||| |||||    
T  7012130 cgacacaacaccgatacctatgatcacactgaattatgtcattttctcaaattattatcggtgtcggcgtgtcggtgtccgtgt 7012047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 46160960 - 46160854
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt-tgtgtccgtatccgt 107  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||| ||| ||| ||||||| ||| |||| || ||| ||||||  |||||||||||| |    
T  46160960 cgacacgacaccgacacatataataacactgaattatgttattttctcatatttttaacggcgtcggcgtgtctgtg-tcgtgtccgtgtccgtatccat 46160862  T
Q  108 acttcata 115  Q
     |||||||    
T  46160861 gcttcata 46160854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 35723383 - 35723484
Alignment:
Q  13 acgacaccgatacatataatgacactgaattatgtg-attttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtactt 111  Q
    ||||||| || ||||||||| ||| ||||||||||| ||||| ||||||||||| ||||||| |||| |||||| || ||| ||||||||||| || |||    
T  35723383 acgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtg-tcatgtcgtgtccgtatcggtgctt 35723481  T
Q  112 cat 114  Q
    |||    
T  35723482 cat 35723484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 30838273 - 30838192
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtg 91  Q
    |||||||||||||||| |||||| ||||| |||||| | ||||||||||||||||| | || ||  ||||||||||| ||||    
T  30838273 gacacgacaccgatacttataattacactaaattatataattttatcaaattattagcagtatcgacgtatcagtgtccgtg 30838192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 14126124 - 14126196
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc 99  Q
    |||||| |||||||||||||||| ||||||||||||||||| ||||| |||| | |||||  |||| ||||||    
T  14126124 tataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtcc 14126196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 15029824 - 15029752
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||| | ||||||||| ||||||||||||||||| || ||||||||||| | ||||| |||| |||||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgt 15029752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 20521873 - 20521933
Alignment:
Q  38 tgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtc 98  Q
    |||||||||||||||||||||||||||| |||| || |||| ||||||| ||||| |||||    
T  20521873 tgaattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtc 20521933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 36635373 - 36635297
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||| |||||||||||||||||||| |||||||||||  |||||  |||| ||||||| || || |||||||    
T  36635373 acatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccg 36635297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 54580023 - 54580087
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||| || |||||| |||||||||||||||||||| |||||||||||   ||||||||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgt 54580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 8423718 - 8423777
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||||| |  |||||| |||||||||||||||||||| ||||||||||| |||||||    
T  8423718 cgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtc 8423777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 40613504 - 40613445
Alignment:
Q  19 ccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||| ||||||||| |||||||||||||||||||| ||||| ||||| ||||||| ||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgt 40613445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 40742655 - 40742572
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||||||||| ||| ||||||||| |||||  ||||| ||||||| |||||||||||| |||||| |||| ||| ||| |||||    
T  40742655 cgacacgacatcgacacatataattacactagattatatgattttctcaaattattaatggtgtcggcgtttcaatgtccgtgt 40742572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 5414168 - 5414258
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||| | |||  |||| | ||||| |||| || |||| ||||| |||||||    
T  5414168 gacacgacaccgatacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcgtgtccg 5414258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 22234885 - 22234955
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtga-ttttatcaaattattaacggtgtcagcgt 78  Q
    |||||||||||||| ||||| ||| |||||||||||||||| |||| ||||||| ||| ||||||| ||||    
T  22234885 cgacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgt 22234955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 23292986 - 23293072
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||| || | |||| | |||||||||||||||||| ||||||||||| | ||||| |||| ||| ||| ||||| |||||||    
T  23292986 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccg 23293072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 30522935 - 30522985
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagt 84  Q
    |||||||||||||||||||| |||||| |||| |||||| |||||||||||    
T  30522935 acactgaattatgtgattttctcaaataattagcggtgtgagcgtatcagt 30522985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 30982873 - 30982935
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtg 71  Q
    |||||||||||||| || |||||| |||||||| ||||||||||| |||||| |||| |||||    
T  30982873 cgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 40865089 - 40865019
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatc 81  Q
    |||||||||||||||||||||| | |||||||| || ||||||  ||||||||||||  | ||||||||||    
T  40865089 acacgacaccgatacatataattatactgaattgtgcgattttcacaaattattaacaatttcagcgtatc 40865019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 49431085 - 49430983
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtga-ttttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttc 112  Q
    ||||||||| || | |||| |||||||||||||||| |||| ||||||||||| | ||||| |||| ||| ||| || || |||||||| ||||| ||||    
T  49431085 cgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgtccgtgtccgtgcttc 49430986  T
Q  113 ata 115  Q
    |||    
T  49430985 ata 49430983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 9996898 - 9996849
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattatt 64  Q
    |||||||| ||||||||| | |||||||||||||||||| ||||||||||    
T  9996898 gacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 12797338 - 12797438
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttca 113  Q
    ||||||||| || | |||| |||||||||||||||||||| |||||||||||    || | |||| ||||||| ||||| || ||||||||||| |||||    
T  12797338 cgacaccgacacttgtaattacactgaattatgtgatttt-tcaaattattagttttgccggcgtgtcagtgtccgtgtcgtatccgtatccgtgcttca 12797436  T
Q  114 ta 115  Q
    ||    
T  12797437 ta 12797438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 35157986 - 35158071
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||| || |||||| ||||| ||||||||||||||  ||||||||||   | ||| |||| ||||||| |||||||||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccg 35158071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 2234295 - 2234239
Alignment:
Q  28 ataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagt 84  Q
    ||||| ||| |||||||||||||||| ||||||||| ||||||| |||||| |||||    
T  2234295 ataattacattgaattatgtgattttctcaaattatcaacggtgacagcgtgtcagt 2234239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 11596348 - 11596424
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||||| | || | |||| |||||||||||||||||||| ||||||||||| |  |||  ||||||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctttgttggcgtatcagtgt 11596424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 11931344 - 11931280
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||| |||| ||| ||||||| | ||||| |||||||||||||| ||| |||||||||||||||    
T  11931344 cgacatgacatcgacacatatatttacactaaattatgtgattttttcatattattaacggtgtc 11931280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 15659755 - 15659811
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||| | ||||||||| |||| |||||||| |||||| |||||||||||    
T  15659755 cgacacgacaccaacacatataattacaccgaattatgagattttctcaaattatta 15659811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 19312399 - 19312355
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgatttt 53  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||    
T  19312399 cgacacgacaccgatacttataattacactgaatcatgtgatttt 19312355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 3947761 - 3947860
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgta 108  Q
    ||||||||||| || || | |||| ||||||||||||| |||||| ||||||||||| | ||||| || | || ||||  |||| |||||||| ||||||    
T  3947761 cgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtctgtgtggtgtccgtgtccgta 3947860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 16189765 - 16189710
Alignment:
Q  17 caccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    |||||| ||| ||||| |||||||||||||||||||| ||||||| ||| ||||||    
T  16189765 caccgacacacataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 20743298 - 20743353
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcg 89  Q
    |||||||||||||| ||||| ||||||||||| | ||||| |||| ||||||||||    
T  20743298 acactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgttcg 20743353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 39035925 - 39035983
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggt 70  Q
    |||||| || ||||||||||||  ||||||||||||||| ||| ||||||||||||||||    
T  39035925 acacgatacagatacatataatttcactgaattatgtga-tttctcaaattattaacggt 39035983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 12895274 - 12895352
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||| || |||||| ||||  |||||||||||||| |||||||||||   ||||| |||| ||| |||||||||    
T  12895274 cgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgt 12895352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 13134514 - 13134460
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattat 63  Q
    |||||||||| ||| ||||||||| ||||| |||||||||||||| | |||||||    
T  13134514 cgacacgacatcgacacatataattacactaaattatgtgattttcttaaattat 13134460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 18576032 - 18576086
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattat 63  Q
    ||||| |||||| | ||||||||| |||| ||||||||||||||| |||||||||    
T  18576032 cgacatgacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 21539868 - 21539954
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgt 101  Q
    ||||| |||| ||||||| ||||| |||||| ||||||| | |||||||||| |||||| || | |||||||   ||||||||||||    
T  21539868 gacacggatatatataattacactaaattatatgattttcttaaattattaatggtgtcggcatgtcagtgtctatgttgtgtccgt 21539954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 4100027 - 4099956
Alignment:
Q  10 gacacgacaccgatacatataatga---cactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||||||| ||||||||| |   |||| |||||||||||| | ||||||| |||| |||||||||||    
T  4100027 gacacgacaccgacacatataattattacactaaattatgtgattgtctcaaatttttaatggtgtcagcgt 4099956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 7970582 - 7970508
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||||| | ||||||||| |||||||||||| ||||||| ||  ||||||  |||||||||| | |||||||    
T  7970582 gacacgacaccaaaacatataattacactgaattatatgattttctc--attattggcggtgtcagcatgtcagtgt 7970508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 8820443 - 8820386
Alignment:
Q  38 tgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgt 95  Q
    |||||||||||||||||||||||||||| || |||   ||| |||||||| |||||||    
T  8820443 tgaattatgtgattttatcaaattattatcgatgttgacgtgtcagtgtttgtgttgt 8820386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 64
Target Start/End: Original strand, 21873392 - 21873421
Alignment:
Q  35 cactgaattatgtgattttatcaaattatt 64  Q
    ||||||||||||||||||||||||||||||    
T  21873392 cactgaattatgtgattttatcaaattatt 21873421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 64
Target Start/End: Original strand, 21929253 - 21929282
Alignment:
Q  35 cactgaattatgtgattttatcaaattatt 64  Q
    ||||||||||||||||||||||||||||||    
T  21929253 cactgaattatgtgattttatcaaattatt 21929282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 24343553 - 24343480
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||| |||||||||||||| ||||| ||||||||||| | ||||| |||| || | || ||||| |||||||    
T  24343553 tataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccg 24343480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 29205501 - 29205452
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||| || | |||| |||||||||||||||||||| |||||||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattatta 29205452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 30299008 - 30298927
Alignment:
Q  12 cacgacaccgatacatataatgacactgaattatgtga-ttttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||||| || | |||| |||||||||||||| | |||| ||||||||||| | ||||| |||| ||||||| |||||    
T  30299008 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 30298927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 30327876 - 30327795
Alignment:
Q  12 cacgacaccgatacatataatgacactgaattatgtga-ttttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||||| || | |||| |||||||||||||| | |||| ||||||||||| | ||||| |||| ||||||| |||||    
T  30327876 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 30327795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 12895111 - 12895167
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||||| || | |||| ||  |||||||||||||||| |||||||||||    
T  12895111 cgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattatta 12895167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 18513236 - 18513300
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||| |||| || |||||| || ||| |||||||||| ||||| ||||||||||| |||||||    
T  18513236 cgacacaacactgacacatatgattacattgaattatgtcattttctcaaattattatcggtgtc 18513300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 21720508 - 21720568
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    |||||||| | ||||| | ||| | |||||| |||||||||||||||||||| ||||||||    
T  21720508 gacaccgacatatatagttacattaaattatatgattttatcaaattattaagggtgtcag 21720568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 21945562 - 21945490
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||| || | |||| |||||||||||||| ||||| ||||||||||| | ||||| || | |||||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgt 21945490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 28964263 - 28964299
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattatta 65  Q
    |||| |||||||||||||||||||| |||||||||||    
T  28964263 taattacactgaattatgtgattttttcaaattatta 28964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 34515894 - 34515958
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtc 98  Q
    |||||||||||||| ||||| |  |||||||| | |||||  ||| |||||||||||||||||||    
T  34515894 acactgaattatgtcattttcttgaattattatccgtgtcgacgtgtcagtgttcgtgttgtgtc 34515958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 88)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 1486704 - 1486779
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagt 84  Q
    |||||||||||||| || |||||| |||||||||||||||||||| ||||||||||| | |||||||||| |||||    
T  1486704 cgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagt 1486779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 2896141 - 2896208
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgt 101  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||| ||||||| ||||||||||||||    
T  2896141 acactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccgt 2896208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 9629895 - 9630001
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgta 108  Q
    |||||||||||||| || |||||| |||||||||||| ||||||||||||||||||| |||||||   || || |||| | ||| ||| ||||||||||     
T  9629895 cgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgtcggtgtccatgtcgtggccgtatccgtg 9629994  T
Q  109 cttcata 115  Q
    |||||||    
T  9629995 cttcata 9630001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 398778 - 398851
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||| |||| ||||||| ||||| |||||||    
T  398778 tataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 398851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 36878519 - 36878418
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt-tgtgtccgtatccgtacttca 113  Q
    |||||||| || |||||| |||||||||||||||||||| ||||||||||| ||||||| |||| |||||||   |||  |||||||||||||| |||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccgtgtccgtatccgtgcttca 36878420  T
Q  114 ta 115  Q
    ||    
T  36878419 ta 36878418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 5898267 - 5898359
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgt 107  Q
    ||||||||  |||||||| |||||||||||||||||||| ||| ||||||| ||||||| |||| |||||||  ||||  |||||||||||||    
T  5898267 gacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtccgtatccgt 5898359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 9828107 - 9828039
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||  |||||| ||||    
T  9828107 gacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgt 9828039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 24577182 - 24577288
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgtt--gtgtccgtatccgt 107  Q
    ||||||||||||| || | |||| |||||||||||||||||||| |||||||||||   |||||||||| || ||| |||||||  ||||||||||||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtg-tcgtgttcagtgtccgtatccgt 24577280  T
Q  108 acttcata 115  Q
     |||||||    
T  24577281 gcttcata 24577288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 6427413 - 6427322
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgt 101  Q
    ||||||||||| | ||||||||| ||| |||||||||||||||| ||||||||||| ||||||  |||| ||||||| ||||  ||||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccgt 6427322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 40181930 - 40181879
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  40181930 cgacaccgatacatataattacactgaattatgtgattttctcaaattatta 40181879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 7918207 - 7918297
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||| || ||||||||| |||||||||||||||||||| |||||||||||  | ||||||||| ||| |||  |||| |||||||    
T  7918207 gacacgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccg 7918297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 13997940 - 13997870
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||| ||||||||| |||||||||||||||||||| | |||| |||||||||||| |||| |||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgt 13997870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 44482294 - 44482240
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattat 63  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  44482294 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 52903308 - 52903230
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||| ||||||||| |||||||||||| ||||||||| |||||||||||||| || |||| | ||||| |||||    
T  52903308 cgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtgt 52903230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 1864882 - 1864939
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||||||| |||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtc 1864939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 10572586 - 10572675
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||| ||||||| |||| |||| |||| ||||||||||||||| |||||||||||  |||||| |||| ||||||||| ||| |||||||    
T  10572586 acacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccg 10572675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 34371775 - 34371712
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    |||||||||||| ||||||||| |||||||||||||||||||| || |||||||| |||||||||    
T  34371775 acacgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgtcag 34371712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 5376495 - 5376586
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||||||| || | |||| |||||||||||||| ||||| | ||||||||| ||||||| |||| | ||||| ||||| |||||||    
T  5376495 cgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccg 5376586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 6612166 - 6612257
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||||||| || | |||| |||||||||||||| ||||| ||||||||||||| || || |||| ||| ||| ||||| |||||||    
T  6612166 cgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccg 6612257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 20157346 - 20157409
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||||||||| |||||| || |||||||||||||||||||| ||| ||||||| |||||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtc 20157409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 42359449 - 42359532
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgt 97  Q
    ||||||||| || | |||| |||||||||| ||||||||| |||||||||||   |||||||||| ||||||| ||||||||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgt 42359532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 25361950 - 25361896
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattat 63  Q
    ||||||||||| || ||||||||| |||||||||||||||||||| |||||||||    
T  25361950 cgacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 1262919 - 1262846
Alignment:
Q  38 tgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc-gtatccgtact 110  Q
    |||||||||||||||| ||||||||||| | ||||| |||| || |||||||||| |||||| |||||||||||    
T  1262919 tgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccggtatccgtact 1262846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 17425103 - 17425152
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  17425103 acatataattacattgaattatgtgattttatcaaattattatcggtgtc 17425152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 19562622 - 19562699
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||||| | ||||||||| |||||||| |||| |||||| ||||||||||| | ||||| |||| |||||||||||||    
T  19562622 gacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgttcgtgt 19562699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 9709879 - 9709795
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtc 98  Q
    ||||||||| ||||||||| |||  ||||||||||||||| ||||||||||| ||||||  || | ||||||| ||||| |||||    
T  9709879 cgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 32724108 - 32724176
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||| ||| | |||||||| | ||| |||||||||||||| |||| ||||||||||||||||||    
T  32724108 acatataattacattaaattatgtaaatttctcaaattattaacgatgtcggcgtatcagtgttcgtgt 32724176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 38503384 - 38503320
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||| |||||||| ||||||||| |||||||| ||| ||||||| ||||||||||| |||||||    
T  38503384 cgacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtc 38503320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 14332642 - 14332693
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||| ||||||||| ||||| |||||||||||||| |||||||||||    
T  14332642 cgacaccgagacatataattacactaaattatgtgattttctcaaattatta 14332693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 25272544 - 25272481
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtca 74  Q
    |||||||||||| || |||||| ||||| |||||||||||||| ||||||| ||||| ||||||    
T  25272544 acacgacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtca 25272481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 34257922 - 34257969
Alignment:
Q  26 atataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  34257922 atataattacactaaattatgtgattttattaaattattaacggtgtc 34257969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 113363 - 113289
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcag 83  Q
    |||||||||||| | || | |||| |||||||||||||||||||| ||||||||||| | ||||| |||| ||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 5944347 - 5944254
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtga--ttttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||||||| || |||||| ||||||||||||||||  |||| ||||||||||| | ||| | |||| |||||||  |||| |||||||    
T  5944347 cgacacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccg 5944254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 6332732 - 6332679
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||||||||| | |||| |||||||||||||||||||| |||||||||||    
T  6332732 acacgacaccgatacttgtaattacactgaattatgtgatttt-tcaaattatta 6332679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 14359537 - 14359622
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcata 115  Q
    |||| ||||| |||||||||||||| ||||||||||| | ||||| |||| || ||||  |||| |||||||||||||| |||||||    
T  14359537 taattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccgtatccgtgcttcata 14359622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 17831541 - 17831603
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||| || ||||||||| |||||||||| ||||||||||| ||||||| |||| |||||||    
T  17831541 acatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 17831603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 38078661 - 38078739
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||| || | |||| ||| |||||||||||||||| ||||||||||| | |||||  ||| |||||||||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgt 38078739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 48450602 - 48450688
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcata 115  Q
    |||| ||||| |||||||| ||||| ||||||||||| | ||||  |||| ||||||| ||||| |||||||||||| | |||||||    
T  48450602 taattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccgtatccatgcttcata 48450688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 19324611 - 19324550
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtg 85  Q
    ||||||||| |||||||||||||||||||| ||||||||| | | |||||  ||||||||||    
T  19324611 acatataattacactgaattatgtgattttctcaaattatcagcagtgtcgacgtatcagtg 19324550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 25098565 - 25098614
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||||| |||||||||||||||||||| ||||||||| | |||||||    
T  25098565 acatataattacactgaattatgtgattttctcaaattatcagcggtgtc 25098614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 34298488 - 34298411
Alignment:
Q  21 gatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtc 98  Q
    ||||| |||||| |||||||||||||||||||| |||||||||||  |||||| | || ||||| | ||||| |||||    
T  34298488 gatacgtataattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 17754375 - 17754311
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||| |||| || ||||||| | |||||||||||||| ||||| ||||||||||| |||||||    
T  17754375 cgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtc 17754311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 23636050 - 23636150
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcat 114  Q
    |||||||| ||||| ||| |||||||||||||| ||||| ||||||| ||  |||| || |||| ||| ||| ||||| |||| |||||| || ||||||    
T  23636050 gacaccgacacatacaattacactgaattatgtaattttctcaaatttttggcggtttcggcgtgtcaatgtccgtgtcgtgtgcgtatctgtgcttcat 23636149  T
Q  115 a 115  Q
    |    
T  23636150 a 23636150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 27471567 - 27471655
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtat 103  Q
    |||||| | |||| |||| ||||||||||||||| |||| ||||||||||| |||| || | || |||||||| |||| | ||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgtttgtgtcgcgtccgtat 27471655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 28273089 - 28273189
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcat 114  Q
    |||||||| || | |||| |||||||||||| ||||||| |||||| ||||   |||||||| | ||||||| | |||  ||||||||||||| ||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtccttgtcatgtccgtatccgtgcttcat 28273188  T
Q  115 a 115  Q
    |    
T  28273189 a 28273189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 28674847 - 28674795
Alignment:
Q  26 atataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||| | |||||||||||| ||||| |||||||||||||||||| |||||    
T  28674847 atataattatactgaattatgtaattttctcaaattattaacggtgttagcgt 28674795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 34712378 - 34712434
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||||| || ||||||||| ||||| |||||||| ||||| |||||||||||    
T  34712378 cgacacgacactgacacatataattacactaaattatgttattttctcaaattatta 34712434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 39953146 - 39953210
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||| ||||| ||| ||||| |||||||||||||| | ||||||||| ||||||| ||||    
T  39953146 cgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggcgt 39953210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 41877470 - 41877542
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||| || | |||| ||||| |||||||| ||||| ||||||||||| ||||||| ||||| ||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgt 41877542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 47989561 - 47989505
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||||| || | |||| |||||||||||||||||||| | |||||||||    
T  47989561 cgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 1704988 - 1705043
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||||||| || | |||| || ||||||||||||||||| |||||||||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattatta 1705043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 30749899 - 30749860
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgatttt 53  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  30749899 cgacaccgacacatataattacactgaattatgtgatttt 30749860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 30771350 - 30771311
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgatttt 53  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  30771350 cgacaccgacacatataattacactgaattatgtgatttt 30771311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 40258934 - 40258985
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaa 66  Q
    |||||||| || | |||| |||||||||||||||||||| ||||||||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattaa 40258985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 40285649 - 40285712
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    |||||||||| ||| |||||| |  ||||||||||||| |||||| ||||||||||| ||||||    
T  40285649 cgacacgacatcgacacatatgactacactgaattatgcgattttctcaaattattagcggtgt 40285712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 2784614 - 2784556
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||||| ||||||||| | ||| |||||||||||||| | ||||| |||||||||||    
T  2784614 gacaccgacacatataattatactcaattatgtgattttcttaaatttttaacggtgtc 2784556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 9103673 - 9103627
Alignment:
Q  40 aattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||||||||| ||||||||||||| ||||| |||| |||||||    
T  9103673 aattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgt 9103627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 12443470 - 12443524
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||| ||| |||||||||||||||||||| ||||||||||| | ||||| ||||    
T  12443470 acatacaattacactgaattatgtgattttctcaaattattagctgtgtcggcgt 12443524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 12612028 - 12611962
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcg 77  Q
    |||||| || || |||||| || ||||| |||||||||||||| |||||||| |||| |||||||||    
T  12612028 acacgatactgacacatatgattacactcaattatgtgattttttcaaattactaacagtgtcagcg 12611962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 18337388 - 18337338
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattatt 64  Q
    ||||||||| || | |||| |||||||||||||||||||| ||||||||||    
T  18337388 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 19058856 - 19058958
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatc-agtgttcgtgttgtgtccgtatccgtacttc 112  Q
    ||||||||| || | |||| |||||||||||||| || || | ||||||||| | ||||| |||| || |||||  |||| |||||||||||||| ||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtcaagtgtgtgtgtcgtgtccgtatccgtgcttc 19058955  T
Q  113 ata 115  Q
    |||    
T  19058956 ata 19058958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 22781501 - 22781435
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtat 80  Q
    ||||||| || |||||||| | | | |||||| ||||||||| ||||||||| ||||||||||||||    
T  22781501 cgacaccaatgcatataattatatttaattatatgattttataaaattattagcggtgtcagcgtat 22781435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 46348383 - 46348461
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||| || | |||| ||||| |||||| ||||||| ||||||||||| | ||||| |||| ||||||| |||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 46348461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 351090 - 351135
Alignment:
Q  20 cgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||| ||  || ||||||||||||||||||||||||||||    
T  351090 cgatacatatgattccattgaattatgtgattttatcaaattatta 351135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 2851059 - 2851022
Alignment:
Q  35 cactgaattatgtgattttatcaaattattaacggtgt 72  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  2851059 cactgaattatgtaattttatcaaattattagcggtgt 2851022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 6415002 - 6415079
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||||||| |||| |||| | |||| ||||||||||||| |||||| |||| || |||| |||| ||||||| |||||    
T  6415002 gacaccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgt 6415079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 10233302 - 10233261
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||| |||||||||||||||||||| |||| ||||||    
T  10233302 acatataattacactgaattatgtgattttctcaatttatta 10233261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 10474996 - 10475041
Alignment:
Q  33 gacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||||||||||||||| |||| |||||| ||||||| ||||    
T  10474996 gacactgaattatgtgattttctcaagttattagcggtgtcggcgt 10475041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 12713329 - 12713378
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||| ||||||||||| ||||| |||||||||||||| | |||||||||    
T  12713329 acaccaatacatataattacactaaattatgtgattttcttaaattatta 12713378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 12717420 - 12717469
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||| ||||||||||| ||||| |||||||||||||| | |||||||||    
T  12717420 acaccaatacatataattacactaaattatgtgattttcttaaattatta 12717469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 16812581 - 16812524
Alignment:
Q  35 cactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||||||||||||| |||||||||||  |||||| | || ||||||| |||||    
T  16812581 cactgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgtgt 16812524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 21038147 - 21038058
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtc 98  Q
    ||||||||||| ||  ||||| || |||||||||||||| ||||| | ||||||||| |||| | || |||| ||||| | |||||||||    
T  21038147 cgacacgacactgacgcatatgattacactgaattatgtaattttcttaaattattagcggtattagtgtataagtgtccatgttgtgtc 21038058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 22515887 - 22515964
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtg 91  Q
    ||||||||| || | |||| ||||| |||||||||||||| ||||||||||| | ||||| |||| || |||| ||||    
T  22515887 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgtg 22515964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 5927366 - 5927426
Alignment:
Q  40 aattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||| ||||||| ||||||||||| | |||| ||||| ||||||| ||||| |||||||    
T  5927366 aattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccg 5927426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 9449030 - 9449066
Alignment:
Q  36 actgaattatgtgattttatcaaattattaacggtgt 72  Q
    |||||||||||||||||| |||||||||||| |||||    
T  9449030 actgaattatgtgattttttcaaattattaatggtgt 9449066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 12715152 - 12715238
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaatta---tgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||||||||||  ||||||||||| | ||| |||||   ||||||||| | ||||||||| || | ||||| |||||||||||||||    
T  12715152 cgacacgacactaatacatataattatacttaattattatgtgattttcttaaattattagcgctatcagcatatcagtgttcgtgt 12715238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 13436517 - 13436453
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||| | ||||||||| |||||||||||||||||||  | ||||||||| | ||||| ||||    
T  13436517 cgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtcggcgt 13436453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 18556454 - 18556534
Alignment:
Q  12 cacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||| |||| | |||| ||| | ||||||||||| || ||||||||||| | ||||| |||| ||||||| |||||    
T  18556454 cacgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 18556534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 21530748 - 21530684
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||| || |||||| | ||  |||||| ||||||| ||||||||||||||||||| ||||    
T  21530748 cgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgt 21530684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 22881616 - 22881688
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||| || | |||| ||||| |||||||||||||| |||||||||||   ||||| |||| |||||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 22881688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 31015087 - 31015051
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattatta 65  Q
    |||| |||||||||||||||||||| |||||||||||    
T  31015087 taattacactgaattatgtgattttctcaaattatta 31015051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 31672895 - 31672967
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||| || | |||| ||||||||||| |||||||| ||||||||||| | ||||| | || |||||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgt 31672967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 35919271 - 35919315
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgatttt 53  Q
    ||||||||||| || || |||||| ||||||||||||||||||||    
T  35919271 cgacacgacacggacacttataattacactgaattatgtgatttt 35919315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 36906046 - 36905998
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    ||||||||| || ||||||||||||||||| ||| ||||||| ||||||    
T  36906046 acatataattactctgaattatgtgattttctcagattattagcggtgt 36905998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 37598890 - 37598819
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||| || |||||| |||||||||| ||||||||| |||||||||||   ||||| |||| |||||||    
T  37598890 cgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 37598819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 40917813 - 40917724
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||||||| || | |||| ||||| ||||  |||||||| ||||||||||| | ||||| |||| ||||| | ||||| |||||||    
T  40917813 cgacacgacaccgagacttgtaattacacttaatt--gtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccg 40917724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 44296490 - 44296553
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||||||||||| |||||| || | ||| |||||||| ||||| ||||||||||| |||||||    
T  44296490 cgacacgacaccgacacatatgatta-actaaattatgtcattttctcaaattattaccggtgtc 44296553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 48148034 - 48148098
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtga-ttttatcaaattattaacggtgtca 74  Q
    |||||||||||| | ||||||| |||||||||||| ||| |||| | ||||||||| ||||||||    
T  48148034 acacgacaccgacatatataattacactgaattatatgatttttttaaaattattagcggtgtca 48148098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 28588674 - 28588774
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttca 113  Q
    ||||||||| || |||||| |||||||||||||||||||| ||||||||||| ||||||| |||| ||| ||||  ||| |||||||||| ||| |||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtcaatgtt-atgtcgtgtccgtattcgtgcttca 28588772  T
Q  114 ta 115  Q
    ||    
T  28588773 ta 28588774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 2436985 - 2436879
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt--tgtgtccgtatccgt 107  Q
    ||||||||||||| ||||||||| |||  |||||||||||||||  |||||||||| ||||||| |||| |||||| ||||||   ||||||||||||||    
T  2436985 gacacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtg-tcgtgtccggtgtccgtatccgt 2436887  T
Q  108 acttcata 115  Q
     |||||||    
T  2436886 gcttcata 2436879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 3966566 - 3966490
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||| ||||||| || | |||||||    
T  3966566 gacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgt 3966490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 19579764 - 19579674
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||||||| || | ||||  |||| |||||||||||||| ||||||||||| | ||||| |||||||||||| |||||||| ||||    
T  19579764 gacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgttgtatccg 19579674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 21576760 - 21576848
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt--tgtgtccgtatccgtacttcata 115  Q
    |||| |||||||||||||||||||| ||||||||||| | ||||  ||||||||||||||||||   ||||| |||||||| |||||||    
T  21576760 taattacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgttcgtgtccagtgtctgtatccgtgcttcata 21576848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 39698605 - 39698528
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||||| || || | |||| |||||||||||||||||||| ||||||||||| | |||||||||| |||||||    
T  39698605 cgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgt 39698528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 6471886 - 6471950
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    |||||||||| | ||||||||| |||||||||||||||||||| ||||||||||| | |||||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtcag 6471950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 11685999 - 11685898
Alignment:
Q  13 acgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt-tgtgtccgtatccgtactt 111  Q
    |||||||||| ||||||||| ||||| ||||||| || ||| ||||||||||| ||||||| || | |||||| ||||||  |||||||||||||| |||    
T  11685999 acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtg-tcgtgtccgtgtccgtatccgtgctt 11685901  T
Q  112 cat 114  Q
    |||    
T  11685900 cat 11685898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 21191056 - 21191142
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||| || | |||| |||||||||||||||||||| ||||||||||| | ||||| || | ||||||| ||||| |||||||    
T  21191056 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccg 21191142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 30502388 - 30502446
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    ||||||||| ||||||||| ||||||||||| |||||||| ||||||||||| ||||||    
T  30502388 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 30542731 - 30542789
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    ||||||||| ||||||||| ||||||||||| |||||||| ||||||||||| ||||||    
T  30542731 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 23221040 - 23220983
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||| |||||| || ||||| |||||||||||||||||||||||||| |||||||    
T  23221040 acaccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtc 23220983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 26312828 - 26312743
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc 99  Q
    ||||||||||||||||||| |||||||||||  ||||||| ||||||||||  |||| || || ||||||||| | ||| ||||||    
T  26312828 cgacaccgatacatataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagtgtccatgtcgtgtcc 26312743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 36838605 - 36838544
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    |||||||||||| ||||||||| ||||| |||||||| ||||| ||||||||||| ||||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 37328839 - 37328927
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgt 97  Q
    |||||||||||||| |||| |||| |||||||||| |||||||||  |||||||||  | ||||| | |||||||||| ||||| ||||    
T  37328839 cgacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgt 37328927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 5467991 - 5468034
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggt 70  Q
    |||||| |||||||||||||||||||||||||||||||| ||||    
T  5467991 tataattacactgaattatgtgattttatcaaattattatcggt 5468034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 19552563 - 19552626
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgt 97  Q
    ||||| |||||||||||||| ||||||||||||| ||||| |||| ||||||| ||||| ||||    
T  19552563 acacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 21522814 - 21522723
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||||||| |  | |||| |||||||||||||| ||||| | ||||||||| | ||||| |||| ||||||| ||||| |||||||    
T  21522814 cgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 21522723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 21533380 - 21533289
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||||||| |  | |||| |||||||||||||| ||||| | ||||||||| | ||||| |||| ||||||| ||||| |||||||    
T  21533380 cgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 21533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 24273040 - 24273091
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    ||||||||| |||||||||||||||||||| |||||||| |||| |||||||    
T  24273040 acatataattacactgaattatgtgattttctcaaattaataactgtgtcag 24273091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 24389174 - 24389123
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    ||||||||| |||||||||||||||||||| |||||||| |||| |||||||    
T  24389174 acatataattacactgaattatgtgattttctcaaattaataactgtgtcag 24389123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 24906316 - 24906387
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||| |||||||||||||| ||||| ||||||||||| | ||||  |||| ||||||||||||| |||||||    
T  24906316 taattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtccg 24906387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 41091253 - 41091308
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||| ||| ||||||||| |||||||||||||||||||| |||||| ||||    
T  41091253 gacacgacatcgacacatataattacactgaattatgtgattttctcaaatcatta 41091308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 4344781 - 4344727
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttc 88  Q
    |||||||||||||| ||||| ||||||||||| |||||||||||| | |||||||    
T  4344781 acactgaattatgtcattttttcaaattattatcggtgtcagcgtgttagtgttc 4344727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 6247681 - 6247595
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||| || | |||| |||||||||||||||||||| |||||||||||   ||||| |||| ||||||| ||| | |||||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccg 6247595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 13287395 - 13287485
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||||||| || | || | |||||||||||||||||||| ||||||||||| | |||||  ||| | ||||| ||||| |||||||    
T  13287395 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccg 13287485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 18592137 - 18592059
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgtt 87  Q
    |||||||||||||  ||||||||| ||| |||||||||| ||||| | ||| ||||| ||||||| || ||||||||||    
T  18592137 cgacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgtcggcatatcagtgtt 18592059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 27144512 - 27144450
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||| ||||| |||||||||||||  ||||||||||| ||||||| |||| |||||||    
T  27144512 acatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgt 27144450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 6035546 - 6035470
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||||||||| | ||||||| |||||||||||| | | ||| ||||||||||| ||||||| |||| |||||||    
T  6035546 cgacacgacaccgacaaatataattacactgaattatatta-tttctcaaattattagcggtgtcggcgtgtcagtgt 6035470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 31084387 - 31084310
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||||| ||| || | |||| ||| |||||||||||||||| ||||||||||| | ||||| |||| |||||||    
T  31084387 cgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 31084310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 40131681 - 40131608
Alignment:
Q  13 acgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||||||  |||||| | |||||||||||||||||| |||||||||||   || |||| ||||||||||    
T  40131681 acgacaccgatatttataattaaactgaattatgtgattttttcaaattattagttgtatcagtgtatcagtgt 40131608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 7677769 - 7677713
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||||| || | ||||  ||||||||||||||||||| |||||||||||    
T  7677769 cgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattatta 7677713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 22423807 - 22423863
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||||| | ||||||| | | |||||||||||||||| |||||||||||    
T  22423807 cgacacgacaccgacatatataattatattgaattatgtgattttctcaaattatta 22423863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 23016002 - 23016050
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    |||||| |||||||||||||||||||| |||||| ||||||| ||||||    
T  23016002 tataattacactgaattatgtgattttctcaaatgattaacgatgtcag 23016050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 32630735 - 32630799
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||||| || ||||||||| ||| |||||||| | ||||| ||||||||||| ||||||||||||    
T  32630735 cgacactgacacatataattacattgaattatataattttctcaaattattatcggtgtcagcgt 32630799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 38749558 - 38749622
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||| ||||| | ||||||||| ||| |||||||||| ||||| ||||||||||| |||||||    
T  38749558 cgacacaacaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtc 38749622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 6326312 - 6326383
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||| |||||||||||||| ||||| |||||||| || || |||| |||| ||||||| ||||| |||||||    
T  6326312 taattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccg 6326383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 10022679 - 10022632
Alignment:
Q  26 atataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||| |||||||||||| ||||||||||||||||| |||| ||||    
T  10022679 atataattacactgaattatatgattttatcaaattatcaacgatgtc 10022632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 14674313 - 14674250
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||| ||||| |||||||||||||| ||||||||||| | ||||| |||| ||||||| |||||    
T  14674313 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 14674250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 16203795 - 16203846
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||| ||||||||| ||||| ||||||| |||||| |||||||||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattatta 16203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 30098372 - 30098329
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggt 70  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||    
T  30098372 tataattacattgaattatgtgattttctcaaattattaacggt 30098329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 42029811 - 42029772
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgatttt 53  Q
    ||||||||||||||||||| ||| ||||||||||||||||    
T  42029811 cgacaccgatacatataattacattgaattatgtgatttt 42029772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 19737484 - 19737554
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||| |||||| ||  || |||||||||| ||||| ||||||||||| |||| ||||||| |||||||    
T  19737484 acaccgacacatatgattgcattgaattatgtaattttctcaaattattatcggtttcagcgtgtcagtgt 19737554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 33035811 - 33035873
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||| |||||||||||| ||||||  |||||||||||| ||| || | ||||||||||    
T  33035811 acatataattacactgaattatatgatttattcaaattattaatggtatcggtgtatcagtgt 33035873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 7175045 - 7175078
Alignment:
Q  40 aattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||||||||||| |||||||||||||||||||    
T  7175045 aattatgtgattttctcaaattattaacggtgtc 7175078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 18421841 - 18421890
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattat 63  Q
    |||| |||| ||||||||| |||||| ||||||||||||| |||||||||    
T  18421841 cgacgccgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 21137727 - 21137662
Alignment:
Q  35 cactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||| || ||||| ||| ||||||| || |||| |||| ||||||| |||||||||||||    
T  21137727 cactgaattacgtcattttctcagattattaccgatgtcggcgtgtcagtgtccgtgttgtgtccg 21137662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 27932279 - 27932230
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||| |||||||||||||| ||||| ||||||||||| ||||||| ||||    
T  27932279 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgt 27932230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 36642763 - 36642848
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||| || |||| | ||||| || ||||| | ||| ||||||||||||| ||||| |||| ||||||| ||||| |||||||    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccg 36642848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 40000554 - 40000587
Alignment:
Q  33 gacactgaattatgtgattttatcaaattattaa 66  Q
    ||||||||||||||||||||| ||||||||||||    
T  40000554 gacactgaattatgtgattttttcaaattattaa 40000587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 16374333 - 16374401
Alignment:
Q  5 cacgcgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||| ||||||||||||| |||| |||| ||||||| |||||| ||||| |  ||||||||||| ||||    
T  16374333 cacgtgacacgacaccgacacatgtaattacactgatttatgttatttttttcaattattaacgatgtc 16374401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 17593734 - 17593778
Alignment:
Q  26 atataatgacactgaattatgtgattttatcaaattattaacggt 70  Q
    ||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  17593734 atataattacactgaattacgtgattttctcaaattattagcggt 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 19168831 - 19168879
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    |||||| || ||||||||| ||||||||||||||||||| || ||||||    
T  19168831 acatatgattacactgaataatgtgattttatcaaattaatagcggtgt 19168879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 21814325 - 21814281
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgatttt 53  Q
    |||||||||||||| ||||||||| |||||| ||| |||||||||    
T  21814325 cgacacgacaccgacacatataattacactgcattttgtgatttt 21814281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 32766938 - 32767002
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||||||||  | ||||||||| ||| |||||| || |||||| ||||||||||| |||||||    
T  32766938 cgacacgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgtc 32767002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 35017085 - 35017045
Alignment:
Q  25 catataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||| ||||| |||||||||||||| |||||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattatta 35017045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 40212020 - 40211964
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||||||||||||||| || | | |||||||||| ||||| |||| ||||||    
T  40212020 cgacacgacaccgatacatatgattatattgaattatgtaattttctcaatttatta 40211964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 44520 - 44587
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagc 76  Q
    |||||||| ||||| ||||||||| |||||||||||||||||||| ||||||| ||| ||||||||||    
T  44520 cgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtcagc 44587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 7928509 - 7928450
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||||| ||||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtc 7928450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 26508154 - 26508068
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcata 115  Q
    |||| |||||||||||||||||||| ||||||||||| | |||||||||| ||||| |  || | |||||||||||||| |||||||    
T  26508154 taattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccgtatccgttcttcata 26508068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 8383316 - 8383231
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc 99  Q
    ||||||||| || |||||| |||||||||||| ||||||| ||||||||||| ||||||| |||| ||| ||| ||||| ||||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtcc 8383231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 26492205 - 26492306
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttca 113  Q
    |||||||||||| | |||| |||||||||| | ||||||| ||||||||||| |  |||| |||| ||||||| ||||| |||||||||| ||| |||||    
T  26492205 cgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccgtattcgtgcttca 26492304  T
Q  114 ta 115  Q
    ||    
T  26492305 ta 26492306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 16192745 - 16192809
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||||||| | | ||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  16192745 cgacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtc 16192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 8039830 - 8039893
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    |||||||||||||| ||||||||| |||||||||||| | ||||| ||||||||||| ||||||    
T  8039830 cgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 32429375 - 32429466
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||| ||||||||||  ||||||  ||||||||||||||||||| | ||||||||| || |||| | || ||| |||||||||||||||||    
T  32429375 cgacatgacaccgatatttataattgcactgaattatgtgattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccg 32429466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 9800104 - 9800014
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc 99  Q
    |||||||||||||| || || ||| |||| ||||||||| ||||| |||||||||||  |||||| |||| ||||||| ||||| ||||||    
T  9800104 cgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 11666006 - 11665952
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||    
T  11666006 acacgacaccgacacatataattacactaaattgtgtgattttatcaaattatta 11665952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 10954991 - 10954911
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt--tgtgtccgtatccgtacttc 112  Q
    |||||||||||||||||||| |||||||||||   ||||| |||| |||||||||||||   |||||||||||||| ||||    
T  10954991 acactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtccggtgtccgtatccgtgcttc 10954911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 14979220 - 14979139
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgtacttcata 115  Q
    |||||||||||||||||||| ||||||||||| | ||||| ||||  || ||| | ||| |||||||||||||| |||||||    
T  14979220 acactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgtccgtatccgtgcttcata 14979139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 15796291 - 15796380
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||||| |  | |||| |||||||||||| ||||||| ||||||||||||| ||||| |||| ||| ||| ||||| |||||||    
T  15796291 acacgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccg 15796380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 32804550 - 32804599
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  32804550 acatataattacactaaattatgtgattttctcaaattattaacggtgtc 32804599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 25948882 - 25948938
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||| | || |||||| |||||||||||||||||||| |||||||||||    
T  25948882 cgacacgacaccaacacttataattacactgaattatgtgattttttcaaattatta 25948938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 28918062 - 28917974
Alignment:
Q  12 cacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||||| || | |||| |||||||||||||||||||| ||||||||||| |  |||| |||| ||||| | ||||| |||||||    
T  28918062 cacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccg 28917974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 4987306 - 4987365
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttc 88  Q
    |||| |||||||||||||||||||| ||||||||||| | ||||| |||| |||||||||    
T  4987306 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgttc 4987365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 15544727 - 15544680
Alignment:
Q  39 gaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||||    
T  15544727 gaattatgtgattttatcaaattattagcggtgtcaacgtgtcagtgt 15544680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 34307793 - 34307844
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||||| |||||||| ||||||||||| ||||||||||| ||||||||||||    
T  34307793 tataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgt 34307844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 4201443 - 4201397
Alignment:
Q  26 atataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  4201443 atataattacacttaattatgtgattttttcaaattattaacggtgt 4201397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 17005616 - 17005670
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||| ||||||| || |||||| |||||||||||| |||||||||||||||||||    
T  17005616 acacaacaccgacacttataattacactgaattatatgattttatcaaattatta 17005670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 55401134 - 55401056
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||| || | |||| ||||| |||||||||||||| |||||||||||   ||||| |||||||||||| |||||    
T  55401134 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgt 55401056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 8789550 - 8789599
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattat 63  Q
    ||||||||| ||||||||| |||| ||||||||||||||| |||||||||    
T  8789550 cgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 10268501 - 10268558
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||| ||||| |||||||||||||| ||||||||||||| ||||| |||| |||||||    
T  10268501 taattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgt 10268558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 11658864 - 11658787
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgt 101  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||| |||  | || |||||||  |||| ||||||||    
T  11658864 acatataatcacactgaattatgcgattttctcaaattattaacgatgttggtgtgtcagtgtctgtgtcgtgtccgt 11658787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 24205054 - 24205127
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||| |||||| ||||||| ||||| ||||||||||| | ||||| |||| ||||||| ||||| |||||||    
T  24205054 tataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccg 24205127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 26290431 - 26290358
Alignment:
Q  13 acgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||| || ||||||||| | || ||| ||||||||||| |||||||||||| |||||| |||| |||||||    
T  26290431 acgacactgacacatataattaaaccgaactatgtgattttctcaaattattaatggtgtcggcgtgtcagtgt 26290358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 11313795 - 11313851
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||  | ||||||||| ||||| |||||||||||||| |||||||||||    
T  11313795 cgacacgacactaacacatataattacactaaattatgtgattttctcaaattatta 11313851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 15314873 - 15314937
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    |||||||||| | ||||||||| ||||| |||||||||||||| |||||||| |||  |||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattttttcaaattaataattgtgtcag 15314937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 38731277 - 38731221
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggt 70  Q
    ||||||||| ||||||||  |||||||||||||||||||| | ||||||||| ||||    
T  38731277 cgacaccgacacatataactacactgaattatgtgattttttaaaattattagcggt 38731221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 40993335 - 40993395
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtga-ttttatcaaattattaacggtgtc 73  Q
    ||||||||| ||||||||| |||||||||||||||| |||| | ||||||||| |||||||    
T  40993335 cgacaccgacacatataattacactgaattatgtgattttttttaaattattagcggtgtc 40993395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 49505154 - 49505210
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggt 70  Q
    |||||| || ||||||||| ||||| |||||||||||||| ||||||||||| ||||    
T  49505154 cgacactgacacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 49651781 - 49651837
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||||| || | |||| ||| |||||||||||||||| |||||||||||    
T  49651781 cgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattatta 49651837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 7614415 - 7614474
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||||| | ||||||| | |||||||||||||||||| | ||||||||||| |||||    
T  7614415 cgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtc 7614474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 10690274 - 10690321
Alignment:
Q  26 atataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||| |||||||||||||||||||| ||| ||||||| |||||||    
T  10690274 atataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 12704057 - 12704002
Alignment:
Q  23 tacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    |||||||||| ||||||||||||||| |||| |||||||||||  |||||| ||||    
T  12704057 tacatataattacactgaattatgtgcttttctcaaattattagtggtgtcggcgt 12704002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 24633403 - 24633462
Alignment:
Q  16 acaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    ||||||| ||||||||| ||| ||||||| ||||||||  |||||||||||| |||||||    
T  24633403 acaccgacacatataattacattgaattacgtgatttttccaaattattaactgtgtcag 24633462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 48353731 - 48353782
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||||||||||||| ||| | |||||| ||||||| |||||||||||    
T  48353731 cgacaccgatacatataattacaattaattatttgattttctcaaattatta 48353782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 1509599 - 1509537
Alignment:
Q  13 acgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    |||||||||| || | |||| ||||| |||||||||||||| ||||||||||| | |||||||    
T  1509599 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 1509537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 1550203 - 1550141
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    |||||||||| || || |||||| |||||||||  ||||||||| ||||||||||| ||||||    
T  1550203 gacacgacactgacacctataattacactgaatagtgtgattttttcaaattattagcggtgt 1550141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 4466620 - 4466678
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||||||||||| ||||||| | ||||||||| ||||||| | || |||||||||||||    
T  4466620 acactgaattatatgattttcttaaattattaccggtgtcggagtgtcagtgttcgtgt 4466678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 14618830 - 14618756
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtc 98  Q
    |||||| || ||||||||||||||| |||| | |||||||||  ||||||||||| ||||||  ||||| |||||    
T  14618830 acatattattacactgaattatgtggttttcttaaattattaggggtgtcagcgtctcagtgcccgtgtcgtgtc 14618756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 20691377 - 20691327
Alignment:
Q  15 gacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||| |||||| || |||||||||||||| ||||| |||||||||||    
T  20691377 gacaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 21720803 - 21720745
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||||||| ||| || ||||||||||| ||||||| |||| ||||||| |||||    
T  21720803 acactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgtgt 21720745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 23870572 - 23870618
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||| |||||||||||| ||||||| ||||||||||| |||||||    
T  23870572 tataatcacactgaattatatgattttttcaaattattagcggtgtc 23870618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 28678365 - 28678311
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||| ||||| ||| | ||| |||||||||||||||| |||||||||    
T  28678365 acacgacaccgacacatacaattatactaaattatgtgattttattaaattatta 28678311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 9624689 - 9624640
Alignment:
Q  25 catataatgacactgaattatgtgattttatcaaattattaacggtgtca 74  Q
    |||||||| ||| |||||||||||||||| ||||||||||| | ||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagcagtgtca 9624640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 11252023 - 11251986
Alignment:
Q  28 ataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  11252023 ataattacactgaattatgtgattttctcaaattatta 11251986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 14829753 - 14829677
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||||||||| || | |||| ||  |||||||||||||||| ||||||||||| | ||||| |||| |||||||    
T  14829753 cgacacgacaccgacacttgtaattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgt 14829677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 14840304 - 14840349
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggtgt 72  Q
    |||||| |||||||||||||||||||| | |||||||||| |||||    
T  14840304 tataattacactgaattatgtgattttctgaaattattaatggtgt 14840349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 16789075 - 16789018
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaac 67  Q
    ||||||||||| | || |||||| |||||||||||| ||||||| | |||||||||||    
T  16789075 gacacgacaccaacacttataattacactgaattatatgatttttttaaattattaac 16789018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 21479162 - 21479105
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||| |||||||||| ||||||||| ||||||||||| | ||||| |||| |||||||    
T  21479162 taattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 21479105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 29508493 - 29508452
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  29508493 acatataattacactgaattatatgattttttcaaattatta 29508452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 51206373 - 51206414
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtcag 75  Q
    |||||||||||||||||||| ||||||||||| | |||||||    
T  51206373 acactgaattatgtgattttttcaaattattagctgtgtcag 51206414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 1438855 - 1438791
Alignment:
Q  22 atacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||||| | |||||||||||||||||| ||||||| ||| || |||| | || |||||||    
T  1438855 atacatataattatactgaattatgtgattttctcaaattgttagcgatgtcggtgtgtcagtgt 1438791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 11493372 - 11493412
Alignment:
Q  25 catataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||| |||||||||||||||||||| ||| |||||||    
T  11493372 catataattacactgaattatgtgattttctcacattatta 11493412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 11610560 - 11610496
Alignment:
Q  34 acactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtc 98  Q
    |||||||||||||||||||| | ||||||||| ||||||  |||| ||||| |  ||||||||||    
T  11610560 acactgaattatgtgatttttttaaattattagcggtgttggcgtgtcagtatctgtgttgtgtc 11610496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 14209177 - 14209121
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||||| || || | |||| |||||||||||||||||||| | |||||||||    
T  14209177 cgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattatta 14209121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 18427008 - 18426944
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||| | ||||||| |||| ||||||||||||||| | |||||||||  |||||| ||||    
T  18427008 cgacaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgt 18426944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 25064954 - 25064882
Alignment:
Q  28 ataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||| ||||| |||||||||||||| |||||| |||| ||||||| |||| ||| |||  |||| |||||||    
T  25064954 ataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccg 25064882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 29112292 - 29112352
Alignment:
Q  26 atataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||| |||||||||||| ||||||| |||||| ||||  ||||||| ||| |||||||    
T  29112292 atataattacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcagtgt 29112352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 34185119 - 34185187
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||||||| || | |||| |||||||||| ||||||||| | ||||||||| | ||||| ||||    
T  34185119 gacacgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgt 34185187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 34910361 - 34910325
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattatta 65  Q
    |||| |||||||||||||||||||| |||||||||||    
T  34910361 taattacactgaattatgtgattttttcaaattatta 34910325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 40052367 - 40052319
Alignment:
Q  38 tgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||||||||||| ||||||||||| | ||||| |||| |||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 40052319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 21107 - 21018
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtc 98  Q
    |||||||| ||||| ||||||||| | || || |||||||||||| ||||||||||||| |||||||| | ||||||| ||||| |||||    
T  21107 cgacacgataccgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtgtc 21018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 28913 - 28832
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtg 91  Q
    ||||| ||||||| ||||||||| ||| ||||||||| |||||| | ||||||||||||||||| |||| | ||||||||||    
T  28913 gacacaacaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgttagtgttcgtg 28832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 20236 - 20145
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||||| || || | |||| |||||||||||||||||||| ||||||||||| | ||||| |||| ||| ||| ||||| |||||||    
T  20236 cgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccg 20145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 23484 - 23385
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgta 108  Q
    |||||||||||||| || |||||| |||||||||||||||||||| |  | |||||| | ||||| |||| |||||||  |||| |||||||| ||||||    
T  23484 cgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgtgtccgta 23385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 46726 - 46655
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||| |||||||||||||||||||| ||||||||||||| ||||| |||| ||| ||| ||||| |||||||    
T  46726 taattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccg 46655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 135308 - 135363
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||| |||||||||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattatta 135363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 9744 - 9798
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||    
T  9744 acacgacaccgacacatataattacactgaattaagtgattttctcaaattatta 9798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 462 - 539
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtg 91  Q
    ||||||||| || | |||| |||||||||| ||||||||| ||||||||||| | ||||| |||||||||||| ||||    
T  462 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtg 539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 241656 - 241567
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||||||||| ||  ||||| ||||| ||||||||||||||  |||||||||| | ||||| |||| ||||||| ||||| |||||||    
T  241656 acacgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 241567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 25765 - 25828
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtca 74  Q
    |||||||||||| || |||||| ||||| |||||||||||||| || |||||||||| ||||||    
T  25765 acacgacaccgacacttataattacactaaattatgtgattttctctaattattaaccgtgtca 25828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 3846 - 3921
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    ||||||||| || || | |||| |||||||||||||||||||| | ||||||||||| ||||| || |||||||||    
T  3846 acacgacactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgt 3921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 51855 - 51792
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    |||| |||||||||||||||||||| ||||||||||| | ||||| |||| ||||||| |||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 51792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 70337 - 70278
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||||| || |||||| |||||||||||||| ||||| ||||||||||||| |||||    
T  70337 cgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtc 70278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 53244 - 53189
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatt 64  Q
    ||||||| |||||| || |||||| |||||||||||||||||||| ||||||||||    
T  53244 cgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 192264 - 192343
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccgtatccgta 108  Q
    |||| |||| ||||||||| ||||| ||||||||||||||||||| |||| ||||||| ||| | ||||| || ||||||    
T  192264 taattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtatcgtgtctgtgtccgta 192343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 178812 - 178905
Alignment:
Q  8 gcgacacgacaccgatacatataatgacactgaattatg-tgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||| ||||| || || | |||| ||||||||||||| ||||||| |||||||||||   ||||| |||| ||||||| ||||| |||||||    
T  178812 gcgacatgacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 178905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 92851 - 92794
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||| |||||||||||||| ||||| ||||||||||| ||||||| |||| |||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgt 92794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 1099 - 1035
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    |||||| |||| || ||||||| | |||||||||||||| ||||| ||||||||||| |||||||    
T  1099 cgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtc 1035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 23832 - 23756
Alignment:
Q  11 acacgacaccgatacatataatgacactgaattatgtga-ttttatcaaattattaacggtgtcagcgtatcagtgt 86  Q
    |||||||||||| || | |||| |||||||||||||||| |||| ||||||||||||| ||| ||| || |||||||    
T  23832 acacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtgacagtgtgtcagtgt 23756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 263367 - 263423
Alignment:
Q  9 cgacacgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    ||||||||||| || || |||||| ||||||||||||||| |||| |||||||||||    
T  263367 cgacacgacactgacacttataattacactgaattatgtggttttctcaaattatta 263423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 90890 - 90807
Alignment:
Q  26 atataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtcc-gtatccgta 108  Q
    ||||||| |||||||||||| ||||||| |||||||||||| |||||  | || |||||||  |||| |||||| |||||||||    
T  90890 atataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtcgtgtccagtatccgta 90807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 99956 - 99893
Alignment:
Q  10 gacacgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtc 73  Q
    ||||||||||| | ||||||||| ||| |||||||||| ||||| | ||||||||| |||||||    
T  99956 gacacgacaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtc 99893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 130526 - 130455
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||| |||||||||||||||||||| ||||| ||||||| ||||| || | ||| ||| ||||| |||||||    
T  130526 taattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccg 130455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 8857 - 8771
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    ||||||||| || | |||| ||||| ||| || ||||||| ||||||||||| | ||||| |||| ||||||| ||||| |||||||    
T  8857 cgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 13438 - 13381
Alignment:
Q  35 cactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||||||||||||| |||||||||||   ||||| |||| ||||||| |||||    
T  13438 cactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgt 13381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 21889 - 21946
Alignment:
Q  35 cactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgt 92  Q
    ||||||||||||||||||| |||||||||||   ||||| |||| ||||||| |||||    
T  21889 cactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgt 21946  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 26442 - 26401
Alignment:
Q  24 acatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||| |||| |||||||||||||||| |||||||||||    
T  26442 acatataacgacattgaattatgtgattttctcaaattatta 26401  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 225281 - 225354
Alignment:
Q  27 tataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgttcgtgttgtgtccg 100  Q
    |||||| ||| || ||||||| ||||| ||||||||||| | ||||| |||| ||||||| ||||| |||||||    
T  225281 tataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 225354  T

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Target: scaffold0697 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 1703 - 1639
Alignment:
Q  14 cgacaccgatacatataatgacactgaattatgtgattttatcaaattattaacggtgtcagcgt 78  Q
    ||||||||| || |||||| | ||  |||||| ||||||| ||||||||||||||||||| ||||    
T  1703 cgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgt 1639  T

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Target: scaffold0376 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 6372 - 6320
Alignment:
Q  13 acgacaccgatacatataatgacactgaattatgtgattttatcaaattatta 65  Q
    |||||||||| ||||||||| ||| |||||||||  ||||| |||||||||||    
T  6372 acgacaccgacacatataattacattgaattatgcaattttgtcaaattatta 6320  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 14574 - 14538
Alignment:
Q  29 taatgacactgaattatgtgattttatcaaattatta 65  Q
    |||| |||||||||||||||||||| |||||||||||    
T  14574 taattacactgaattatgtgattttttcaaattatta 14538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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