View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0889_low_13 (Length: 326)

Name: NF0889_low_13
Description: NF0889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0889_low_13
NF0889_low_13
[»] chr6 (45 HSPs)
chr6 (32-288)||(19624826-19625082)
chr6 (1-55)||(19624826-19624880)
chr6 (80-161)||(12304343-12304424)
chr6 (183-248)||(15301419-15301484)
chr6 (183-248)||(14101327-14101392)
chr6 (183-291)||(3680305-3680411)
chr6 (183-248)||(32543464-32543529)
chr6 (188-248)||(19085338-19085398)
chr6 (179-235)||(26941603-26941659)
chr6 (183-234)||(15551241-15551292)
chr6 (183-241)||(16528515-16528574)
chr6 (190-248)||(13601375-13601433)
chr6 (87-161)||(20819483-20819557)
chr6 (183-248)||(29537821-29537887)
chr6 (183-248)||(13435086-13435151)
chr6 (188-241)||(16332936-16332989)
chr6 (173-248)||(10631327-10631403)
chr6 (183-234)||(24398054-24398105)
chr6 (183-248)||(15532513-15532579)
chr6 (183-281)||(17304116-17304216)
chr6 (183-248)||(17380763-17380829)
chr6 (183-248)||(21624292-21624358)
chr6 (183-241)||(22801345-22801402)
chr6 (183-248)||(25593275-25593337)
chr6 (183-229)||(32335034-32335080)
chr6 (176-241)||(15986557-15986621)
chr6 (183-228)||(26588800-26588845)
chr6 (201-241)||(14733005-14733045)
chr6 (183-234)||(15395556-15395608)
chr6 (183-227)||(19875073-19875117)
chr6 (200-248)||(20113517-20113565)
chr6 (183-229)||(19687934-19687981)
chr6 (183-217)||(7752041-7752075)
chr6 (183-217)||(12352938-12352972)
chr6 (183-217)||(16124336-16124370)
chr6 (183-228)||(19066917-19066963)
chr6 (183-217)||(19453470-19453504)
chr6 (183-217)||(19833902-19833936)
chr6 (183-248)||(21234356-21234422)
chr6 (183-217)||(28252366-28252400)
chr6 (183-217)||(32756762-32756796)
chr6 (183-217)||(33866504-33866538)
chr6 (188-217)||(27167241-27167270)
chr6 (183-228)||(30372578-30372623)
chr6 (183-215)||(30451903-30451935)
[»] chr4 (61 HSPs)
chr4 (38-177)||(49605131-49605270)
chr4 (188-281)||(15560474-15560567)
chr4 (183-245)||(19611220-19611282)
chr4 (182-235)||(6640890-6640943)
chr4 (183-235)||(15134918-15134970)
chr4 (177-248)||(12599948-12600019)
chr4 (110-160)||(12692881-12692931)
chr4 (202-248)||(37986458-37986504)
chr4 (183-240)||(40859906-40859963)
chr4 (183-248)||(14605751-14605817)
chr4 (183-248)||(16631637-16631703)
chr4 (183-240)||(41115665-41115722)
chr4 (183-248)||(54679060-54679125)
chr4 (188-228)||(38513117-38513157)
chr4 (183-241)||(17399531-17399590)
chr4 (183-234)||(18773288-18773339)
chr4 (183-248)||(24628742-24628808)
chr4 (183-248)||(56033726-56033792)
chr4 (183-228)||(3500518-3500563)
chr4 (201-281)||(11900325-11900403)
chr4 (188-240)||(17788890-17788943)
chr4 (182-234)||(18393804-18393857)
chr4 (200-241)||(19621842-19621883)
chr4 (200-241)||(19883909-19883950)
chr4 (183-248)||(22676405-22676469)
chr4 (183-248)||(23749721-23749790)
chr4 (188-248)||(29681362-29681421)
chr4 (188-248)||(55379516-55379576)
chr4 (183-229)||(9752411-9752458)
chr4 (195-234)||(13890048-13890087)
chr4 (183-229)||(17057973-17058020)
chr4 (183-234)||(17527237-17527288)
chr4 (183-234)||(22089484-22089534)
chr4 (183-234)||(24618893-24618944)
chr4 (188-241)||(3106267-3106318)
chr4 (183-217)||(5872802-5872836)
chr4 (183-217)||(11514465-11514499)
chr4 (195-252)||(11914882-11914937)
chr4 (183-217)||(13026989-13027023)
chr4 (183-217)||(14836899-14836933)
chr4 (189-234)||(16325353-16325399)
chr4 (183-217)||(19570446-19570480)
chr4 (183-248)||(19665568-19665631)
chr4 (183-225)||(20571876-20571918)
chr4 (198-248)||(23120751-23120801)
chr4 (183-248)||(29120566-29120632)
chr4 (183-217)||(31267587-31267621)
chr4 (183-217)||(33377569-33377603)
chr4 (201-274)||(3792550-3792623)
chr4 (188-217)||(4947773-4947802)
chr4 (183-241)||(10072085-10072147)
chr4 (183-228)||(13692999-13693044)
chr4 (188-248)||(14905170-14905231)
chr4 (188-217)||(17199287-17199316)
chr4 (188-217)||(18078703-18078732)
chr4 (188-217)||(25656566-25656595)
chr4 (200-241)||(36470133-36470174)
chr4 (183-224)||(37436398-37436439)
chr4 (188-235)||(8686298-8686343)
chr4 (183-219)||(14154864-14154900)
chr4 (175-226)||(43357513-43357565)
[»] scaffold0001 (2 HSPs)
scaffold0001 (30-160)||(426371-426504)
scaffold0001 (13-57)||(426460-426504)
[»] scaffold0160 (2 HSPs)
scaffold0160 (38-142)||(16398-16502)
scaffold0160 (1-49)||(16454-16502)
[»] chr5 (42 HSPs)
chr5 (200-291)||(16606699-16606790)
chr5 (183-248)||(31487409-31487474)
chr5 (183-248)||(21100621-21100686)
chr5 (183-240)||(21199890-21199947)
chr5 (183-248)||(22000898-22000963)
chr5 (183-274)||(6498517-6498606)
chr5 (177-248)||(23413847-23413919)
chr5 (176-246)||(21076056-21076126)
chr5 (188-248)||(7746567-7746627)
chr5 (183-234)||(27276602-27276653)
chr5 (183-248)||(9399484-9399550)
chr5 (109-163)||(22910496-22910550)
chr5 (188-248)||(17814168-17814229)
chr5 (190-241)||(15516176-15516227)
chr5 (183-234)||(31589879-31589930)
chr5 (183-241)||(3246339-3246397)
chr5 (183-248)||(6513301-6513367)
chr5 (183-240)||(35932885-35932943)
chr5 (183-248)||(90305-90369)
chr5 (182-223)||(643594-643635)
chr5 (188-248)||(13736977-13737038)
chr5 (183-240)||(25097920-25097977)
chr5 (183-240)||(25157012-25157069)
chr5 (183-248)||(37395368-37395433)
chr5 (183-227)||(33021851-33021895)
chr5 (183-227)||(42242817-42242861)
chr5 (200-247)||(19546402-19546449)
chr5 (80-163)||(23248401-23248484)
chr5 (183-234)||(26120704-26120754)
chr5 (32-123)||(28335262-28335353)
chr5 (183-234)||(39799697-39799747)
chr5 (183-217)||(13533182-13533216)
chr5 (183-217)||(17456627-17456661)
chr5 (183-217)||(21702439-21702473)
chr5 (21-55)||(23342738-23342772)
chr5 (32-66)||(23342738-23342772)
chr5 (183-217)||(23477577-23477611)
chr5 (183-217)||(40033683-40033717)
chr5 (199-248)||(12353734-12353783)
chr5 (188-229)||(29139298-29139339)
chr5 (191-240)||(31146482-31146530)
chr5 (240-281)||(34637763-34637804)
[»] scaffold0078 (1 HSPs)
scaffold0078 (206-283)||(32597-32674)
[»] scaffold0022 (2 HSPs)
scaffold0022 (183-248)||(36632-36697)
scaffold0022 (183-248)||(134692-134757)
[»] chr8 (40 HSPs)
chr8 (183-248)||(17007506-17007571)
chr8 (183-248)||(17541379-17541444)
chr8 (183-248)||(25163267-25163332)
chr8 (200-248)||(12758632-12758680)
chr8 (183-235)||(13431521-13431573)
chr8 (183-234)||(1210604-1210655)
chr8 (183-241)||(6406957-6407015)
chr8 (183-229)||(18676853-18676899)
chr8 (78-163)||(11457803-11457888)
chr8 (183-248)||(30422320-30422385)
chr8 (188-241)||(36104546-36104599)
chr8 (183-228)||(43773314-43773359)
chr8 (183-248)||(45539374-45539439)
chr8 (188-248)||(18122022-18122082)
chr8 (183-234)||(17287067-17287118)
chr8 (183-234)||(19490988-19491038)
chr8 (188-234)||(23192706-23192753)
chr8 (206-291)||(26832285-26832367)
chr8 (183-234)||(40846308-40846359)
chr8 (183-240)||(19957235-19957293)
chr8 (188-234)||(25850888-25850934)
chr8 (200-248)||(19153237-19153285)
chr8 (200-240)||(19706726-19706766)
chr8 (188-228)||(24667636-24667676)
chr8 (204-248)||(39692758-39692802)
chr8 (183-227)||(43638960-43639004)
chr8 (174-234)||(43644070-43644130)
chr8 (183-217)||(18565172-18565206)
chr8 (198-248)||(23185636-23185686)
chr8 (183-217)||(40213992-40214026)
chr8 (183-228)||(45292039-45292085)
chr8 (188-217)||(9340568-9340597)
chr8 (195-248)||(19942444-19942497)
chr8 (188-225)||(31445303-31445340)
chr8 (188-217)||(40002386-40002415)
chr8 (200-248)||(16188483-16188531)
chr8 (183-215)||(16376251-16376283)
chr8 (188-228)||(17687194-17687234)
chr8 (200-248)||(17796630-17796678)
chr8 (200-248)||(23264517-23264565)
[»] chr7 (57 HSPs)
chr7 (183-248)||(4493745-4493810)
chr7 (39-138)||(19522163-19522262)
chr7 (103-177)||(1852968-1853042)
chr7 (183-248)||(10884062-10884127)
chr7 (183-248)||(33604105-33604170)
chr7 (183-241)||(11792071-11792129)
chr7 (183-248)||(16315429-16315495)
chr7 (38-123)||(19516504-19516589)
chr7 (183-247)||(13261568-13261632)
chr7 (188-240)||(13902553-13902605)
chr7 (183-246)||(13259337-13259400)
chr7 (183-241)||(12367656-12367714)
chr7 (202-248)||(13302081-13302127)
chr7 (183-248)||(30025134-30025200)
chr7 (183-248)||(2499229-2499294)
chr7 (200-253)||(13731563-13731616)
chr7 (188-241)||(15705392-15705445)
chr7 (183-248)||(16557502-16557567)
chr7 (183-248)||(16608095-16608160)
chr7 (200-248)||(13645669-13645717)
chr7 (109-177)||(19516419-19516487)
chr7 (183-233)||(330852-330903)
chr7 (183-241)||(1292253-1292312)
chr7 (183-241)||(13027850-13027908)
chr7 (183-229)||(23125162-23125208)
chr7 (183-240)||(39285439-39285497)
chr7 (183-228)||(10258028-10258073)
chr7 (183-248)||(21284266-21284331)
chr7 (188-248)||(23280868-23280929)
chr7 (183-235)||(32265614-32265667)
chr7 (183-248)||(33692615-33692680)
chr7 (183-228)||(48806795-48806840)
chr7 (109-161)||(1378409-1378461)
chr7 (176-248)||(13473379-13473449)
chr7 (183-219)||(21382349-21382385)
chr7 (188-234)||(16464229-16464276)
chr7 (183-217)||(1559966-1560000)
chr7 (183-217)||(4433463-4433497)
chr7 (183-248)||(5001754-5001820)
chr7 (183-217)||(6045153-6045187)
chr7 (183-229)||(9802285-9802330)
chr7 (188-248)||(13034745-13034807)
chr7 (183-217)||(14746542-14746576)
chr7 (188-241)||(15574506-15574560)
chr7 (183-217)||(18440590-18440624)
chr7 (183-240)||(21211476-21211536)
chr7 (183-217)||(24883266-24883300)
chr7 (183-241)||(48063709-48063766)
chr7 (199-228)||(11573023-11573052)
chr7 (183-235)||(13138830-13138883)
chr7 (188-241)||(33420961-33421014)
chr7 (183-234)||(12223314-12223366)
chr7 (200-248)||(13681513-13681561)
chr7 (200-248)||(16546229-16546277)
chr7 (200-248)||(16619385-16619433)
chr7 (183-235)||(19237964-19238016)
chr7 (183-248)||(21691623-21691690)
[»] chr2 (44 HSPs)
chr2 (183-248)||(40780510-40780575)
chr2 (183-248)||(20569583-20569648)
chr2 (80-163)||(21484304-21484387)
chr2 (183-234)||(22797610-22797661)
chr2 (183-241)||(27294691-27294750)
chr2 (173-248)||(39038474-39038549)
chr2 (183-241)||(25828355-25828413)
chr2 (183-248)||(17964137-17964202)
chr2 (166-235)||(19539636-19539705)
chr2 (183-248)||(24851506-24851571)
chr2 (174-235)||(28551767-28551828)
chr2 (183-240)||(31328815-31328872)
chr2 (183-240)||(31335536-31335593)
chr2 (188-240)||(22782473-22782525)
chr2 (183-241)||(22455800-22455859)
chr2 (183-229)||(6391867-6391913)
chr2 (183-248)||(24376318-24376384)
chr2 (183-240)||(16494547-16494604)
chr2 (200-241)||(18377064-18377105)
chr2 (183-248)||(28702058-28702123)
chr2 (183-248)||(45087831-45087896)
chr2 (188-248)||(25188609-25188668)
chr2 (183-234)||(16735817-16735868)
chr2 (183-281)||(41122481-41122577)
chr2 (183-248)||(24778531-24778597)
chr2 (188-241)||(38780603-38780655)
chr2 (183-234)||(14794631-14794683)
chr2 (188-228)||(22682653-22682693)
chr2 (185-217)||(24216950-24216982)
chr2 (183-234)||(24450299-24450350)
chr2 (188-234)||(25917919-25917966)
chr2 (183-217)||(1041534-1041568)
chr2 (183-241)||(1587874-1587932)
chr2 (202-248)||(10010584-10010630)
chr2 (188-226)||(22111511-22111549)
chr2 (183-240)||(22188949-22189007)
chr2 (183-248)||(22257389-22257455)
chr2 (183-248)||(24575232-24575298)
chr2 (183-217)||(28732713-28732747)
chr2 (39-121)||(37127077-37127159)
chr2 (188-240)||(23185172-23185222)
chr2 (188-240)||(23596435-23596485)
chr2 (188-217)||(29243612-29243641)
chr2 (202-234)||(14866579-14866611)
[»] chr3 (68 HSPs)
chr3 (183-294)||(19889782-19889893)
chr3 (76-161)||(12718552-12718637)
chr3 (177-248)||(17239818-17239889)
chr3 (183-234)||(23539128-23539179)
chr3 (183-248)||(29854613-29854679)
chr3 (183-248)||(1241964-1242029)
chr3 (183-248)||(6089931-6089996)
chr3 (183-248)||(12727125-12727190)
chr3 (183-248)||(14954613-14954678)
chr3 (183-248)||(28581298-28581363)
chr3 (183-248)||(49554399-49554464)
chr3 (176-248)||(49643653-49643726)
chr3 (183-248)||(52919628-52919692)
chr3 (188-240)||(31302557-31302609)
chr3 (183-241)||(40850180-40850239)
chr3 (183-248)||(8875014-8875080)
chr3 (183-248)||(17667572-17667638)
chr3 (183-241)||(21639177-21639235)
chr3 (81-163)||(23333984-23334066)
chr3 (183-248)||(12963975-12964040)
chr3 (183-235)||(12967517-12967570)
chr3 (188-241)||(13823278-13823331)
chr3 (183-248)||(15902399-15902463)
chr3 (183-240)||(19250285-19250342)
chr3 (183-248)||(19885967-19886032)
chr3 (188-241)||(30055072-30055125)
chr3 (188-241)||(49669381-49669434)
chr3 (183-227)||(3237897-3237941)
chr3 (109-161)||(10493716-10493768)
chr3 (200-248)||(29952326-29952374)
chr3 (200-248)||(30001480-30001528)
chr3 (178-225)||(8693084-8693131)
chr3 (178-225)||(9044953-9045000)
chr3 (183-241)||(14393891-14393950)
chr3 (183-241)||(2560388-2560446)
chr3 (183-229)||(22770762-22770808)
chr3 (183-241)||(46797290-46797348)
chr3 (200-241)||(13781482-13781523)
chr3 (183-248)||(41494206-41494270)
chr3 (200-248)||(13939116-13939164)
chr3 (183-241)||(22804917-22804974)
chr3 (188-228)||(33582426-33582466)
chr3 (188-248)||(38178534-38178594)
chr3 (201-248)||(20628351-20628398)
chr3 (183-217)||(2025299-2025333)
chr3 (183-217)||(4433170-4433204)
chr3 (183-241)||(11189197-11189254)
chr3 (196-234)||(13410965-13411003)
chr3 (188-281)||(14310888-14310979)
chr3 (183-217)||(15663529-15663563)
chr3 (183-217)||(16076338-16076372)
chr3 (183-217)||(17910797-17910831)
chr3 (183-217)||(17960811-17960845)
chr3 (183-217)||(19888145-19888179)
chr3 (183-217)||(21735582-21735616)
chr3 (183-217)||(22150410-22150444)
chr3 (183-241)||(22465376-22465433)
chr3 (183-217)||(28165386-28165420)
chr3 (188-217)||(13601648-13601677)
chr3 (200-252)||(16199933-16199983)
chr3 (188-217)||(24707349-24707378)
chr3 (183-228)||(53057634-53057679)
chr3 (200-240)||(18122545-18122585)
chr3 (188-235)||(20645361-20645409)
chr3 (200-240)||(26418618-26418658)
chr3 (183-248)||(40799091-40799158)
chr3 (177-217)||(45862521-45862561)
chr3 (183-227)||(47206875-47206919)
[»] scaffold0488 (1 HSPs)
scaffold0488 (183-241)||(11402-11460)
[»] scaffold0084 (2 HSPs)
scaffold0084 (183-241)||(31792-31850)
scaffold0084 (188-241)||(48523-48577)
[»] chr1 (43 HSPs)
chr1 (183-241)||(7308992-7309050)
chr1 (174-240)||(12625367-12625433)
chr1 (198-248)||(20959843-20959893)
chr1 (183-240)||(17025821-17025878)
chr1 (183-248)||(30892266-30892331)
chr1 (183-248)||(33257181-33257246)
chr1 (183-248)||(33277353-33277418)
chr1 (183-234)||(9345980-9346031)
chr1 (183-234)||(24218571-24218622)
chr1 (183-241)||(32786758-32786816)
chr1 (183-248)||(22153027-22153092)
chr1 (183-248)||(22202694-22202758)
chr1 (183-235)||(10756634-10756686)
chr1 (183-283)||(48571030-48571129)
chr1 (183-234)||(2820096-2820147)
chr1 (183-234)||(27857987-27858038)
chr1 (198-241)||(28493140-28493183)
chr1 (183-225)||(23975674-23975716)
chr1 (183-248)||(12283596-12283660)
chr1 (188-240)||(21192703-21192756)
chr1 (183-248)||(29215001-29215066)
chr1 (188-241)||(44824572-44824625)
chr1 (188-241)||(46088199-46088252)
chr1 (183-235)||(1577050-1577102)
chr1 (183-234)||(18517884-18517936)
chr1 (183-234)||(25398675-25398725)
chr1 (183-217)||(19037171-19037205)
chr1 (183-217)||(19171208-19171242)
chr1 (183-229)||(23053583-23053628)
chr1 (183-217)||(51657286-51657320)
chr1 (188-217)||(5973098-5973127)
chr1 (188-217)||(12740485-12740514)
chr1 (200-241)||(21121871-21121912)
chr1 (200-241)||(21205676-21205717)
chr1 (200-241)||(21215491-21215532)
chr1 (177-234)||(21684786-21684843)
chr1 (183-248)||(22465625-22465690)
chr1 (177-234)||(23549523-23549580)
chr1 (188-225)||(23917107-23917144)
chr1 (183-215)||(17017784-17017816)
chr1 (200-248)||(22600999-22601047)
chr1 (183-227)||(23861275-23861319)
chr1 (188-248)||(38281570-38281629)
[»] scaffold0210 (4 HSPs)
scaffold0210 (76-161)||(7280-7365)
scaffold0210 (183-248)||(823-889)
scaffold0210 (21-55)||(7333-7367)
scaffold0210 (32-66)||(7333-7367)
[»] scaffold0146 (1 HSPs)
scaffold0146 (177-248)||(14311-14382)
[»] scaffold0054 (1 HSPs)
scaffold0054 (94-161)||(18083-18150)
[»] scaffold0018 (1 HSPs)
scaffold0018 (183-248)||(50486-50552)
[»] scaffold1657 (1 HSPs)
scaffold1657 (183-240)||(1020-1077)
[»] scaffold0364 (1 HSPs)
scaffold0364 (183-232)||(5376-5425)
[»] scaffold0315 (1 HSPs)
scaffold0315 (183-248)||(7872-7937)
[»] scaffold0081 (1 HSPs)
scaffold0081 (183-240)||(13197-13254)
[»] scaffold0471 (1 HSPs)
scaffold0471 (183-241)||(2657-2715)
[»] scaffold0275 (1 HSPs)
scaffold0275 (183-241)||(23830-23888)
[»] scaffold0035 (2 HSPs)
scaffold0035 (183-241)||(20315-20372)
scaffold0035 (200-241)||(110441-110482)
[»] scaffold0007 (2 HSPs)
scaffold0007 (183-229)||(63538-63584)
scaffold0007 (193-229)||(45877-45913)
[»] scaffold0005 (1 HSPs)
scaffold0005 (183-248)||(211561-211627)
[»] scaffold0004 (2 HSPs)
scaffold0004 (183-248)||(378394-378460)
scaffold0004 (195-248)||(219454-219507)
[»] scaffold0439 (1 HSPs)
scaffold0439 (188-241)||(7558-7611)
[»] scaffold0205 (1 HSPs)
scaffold0205 (183-248)||(795-860)
[»] scaffold0530 (1 HSPs)
scaffold0530 (200-248)||(2857-2905)
[»] scaffold0330 (1 HSPs)
scaffold0330 (188-248)||(514-574)
[»] scaffold0116 (2 HSPs)
scaffold0116 (183-235)||(21791-21843)
scaffold0116 (188-227)||(2833-2873)
[»] scaffold0479 (1 HSPs)
scaffold0479 (201-248)||(9187-9234)
[»] scaffold0113 (1 HSPs)
scaffold0113 (188-235)||(2405-2452)
[»] scaffold0056 (1 HSPs)
scaffold0056 (183-241)||(26499-26558)
[»] scaffold0045 (1 HSPs)
scaffold0045 (183-234)||(88456-88507)
[»] scaffold0037 (1 HSPs)
scaffold0037 (183-234)||(87098-87149)
[»] scaffold1747 (1 HSPs)
scaffold1747 (183-240)||(523-581)
[»] scaffold1745 (1 HSPs)
scaffold1745 (183-240)||(830-888)
[»] scaffold0598 (1 HSPs)
scaffold0598 (200-281)||(2596-2675)
[»] scaffold0567 (1 HSPs)
scaffold0567 (198-248)||(9116-9166)
[»] scaffold0138 (1 HSPs)
scaffold0138 (188-249)||(16193-16255)
[»] scaffold0023 (1 HSPs)
scaffold0023 (183-248)||(102757-102823)
[»] scaffold0011 (1 HSPs)
scaffold0011 (183-229)||(250851-250897)
[»] scaffold0290 (1 HSPs)
scaffold0290 (183-235)||(19510-19563)
[»] scaffold0859 (1 HSPs)
scaffold0859 (183-247)||(2172-2236)
[»] scaffold0391 (1 HSPs)
scaffold0391 (173-217)||(3051-3095)
[»] scaffold0074 (1 HSPs)
scaffold0074 (183-234)||(30977-31029)
[»] scaffold0040 (1 HSPs)
scaffold0040 (200-240)||(2919-2959)
[»] scaffold0028 (2 HSPs)
scaffold0028 (188-240)||(80572-80623)
scaffold0028 (188-217)||(13976-14005)
[»] scaffold0311 (1 HSPs)
scaffold0311 (183-218)||(19326-19361)
[»] scaffold0752 (1 HSPs)
scaffold0752 (183-217)||(620-654)
[»] scaffold0352 (1 HSPs)
scaffold0352 (183-228)||(1683-1729)
[»] scaffold0267 (1 HSPs)
scaffold0267 (183-217)||(7188-7222)
[»] scaffold0249 (1 HSPs)
scaffold0249 (183-241)||(18608-18666)
[»] scaffold0163 (1 HSPs)
scaffold0163 (183-248)||(25630-25696)
[»] scaffold0068 (1 HSPs)
scaffold0068 (183-217)||(11437-11471)
[»] scaffold0047 (1 HSPs)
scaffold0047 (183-217)||(33733-33767)
[»] scaffold0038 (1 HSPs)
scaffold0038 (183-217)||(52566-52600)
[»] scaffold0002 (2 HSPs)
scaffold0002 (183-217)||(476165-476199)
scaffold0002 (183-217)||(482685-482719)
[»] scaffold0217 (1 HSPs)
scaffold0217 (191-248)||(18246-18303)
[»] scaffold0026 (1 HSPs)
scaffold0026 (183-248)||(7082-7147)
[»] scaffold0025 (1 HSPs)
scaffold0025 (188-252)||(73739-73801)
[»] scaffold0009 (1 HSPs)
scaffold0009 (183-248)||(83500-83564)
[»] scaffold0622 (1 HSPs)
scaffold0622 (183-215)||(1869-1901)
[»] scaffold0498 (1 HSPs)
scaffold0498 (204-240)||(1058-1094)
[»] scaffold0161 (2 HSPs)
scaffold0161 (200-248)||(10951-10999)
scaffold0161 (200-248)||(15615-15663)


Alignment Details
Target: chr6 (Bit Score: 201; Significance: 1e-109; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 32 - 288
Target Start/End: Original strand, 19624826 - 19625082
Alignment:
Q  32 aattcagattatataatctgaatttcacttacaccttagttaagttcagattatataatcctaattgtatttacacgctataaaattgagttgaattcga 131  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  19624826 aattcagattatataatccgaatttcacttacaccttagttaagttcagattatataatcctaattgtacttacacgctataaaattgagttaaattcga 19624925  T
Q  132 attattttagcgtttaaataaacatctttggcatatagtataacatgaatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgt 231  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||  |||| ||||||||||| ||||||||||||| |||||| |||||||||||    
T  19624926 attattttagcgtttaaataaagatctttggcataaagtataacatgaaggtgagaaaaacacaagacggggggttgaattatgttagctttttcttcgt 19625025  T
Q  232 tttcacctaaactgaaatcacactttagaacctgatagagttcagcttctaagatga 288  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  19625026 tttcacctaaactgaaatcacacttcagaacctgatagagttcagcttttgagatga 19625082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19624880 - 19624826
Alignment:
Q  1 tataatctgaacttaactaaggtgtaagtgaaattcagattatataatctgaatt 55  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19624880 tataatctgaacttaactaaggtgtaagtgaaattcggattatataatctgaatt 19624826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 12304424 - 12304343
Alignment:
Q  80 gattatataatcctaattgtatttacacgctataaaattgagttgaattcgaattattttagcgtttaaataaacatctttg 161  Q
    |||||||||||||  |||||| |||||| ||| |||||||||||||||||| | ||||||||||||||||| ||||||||||    
T  12304424 gattatataatccggattgtacttacaccctaaaaaattgagttgaattcggactattttagcgtttaaatgaacatctttg 12304343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 15301419 - 15301484
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  15301419 tgagaaaaacacaagaaggggggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 15301484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 14101392 - 14101327
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  14101392 tgagaaaaacacaagaaagggggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 14101327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 291
Target Start/End: Original strand, 3680305 - 3680411
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcacactttagaacctgatagagttcagcttcta 282  Q
    |||| ||||||||||||||| |||||||||||||| |||||||||||| |||  |||  |||||||||||   | |||| | |||||||||||||||||     
T  3680305 tgagaaaaacacaagaagggtggttgaattgtgtttgttttttcttcgatttatcct--actgaaatcactgatcagaagcagatagagttcagcttctg 3680402  T
Q  283 agatgatgt 291  Q
    || ||||||    
T  3680403 aggtgatgt 3680411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 32543464 - 32543529
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||| ||||||    
T  32543464 tgagaaaaacacaagaaggagggttgaattgtgttagctttttcttctttttctcctaacctgaaa 32543529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 19085338 - 19085398
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| | ||| ||||||    
T  19085338 aaaacacaagaaggggggttgaattgtgttggctttttcttcgttttctcataagctgaaa 19085398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 26941603 - 26941659
Alignment:
Q  179 aatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttc 235  Q
    |||||||| |||||||||||| ||| ||||||||||||||| |||||||||||||||    
T  26941603 aatatgagaaaaacacaagaaagggagttgaattgtgttagctttttcttcgttttc 26941659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 15551241 - 15551292
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  15551241 tgagaaaaacacaagaaggggggttgaattgtgttagatttttcttcttttt 15551292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 16528515 - 16528574
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  16528515 tgagaaaaacacaagaagggggggttgaattgtgttagctttttcttcgttttctcctaa 16528574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 13601375 - 13601433
Alignment:
Q  190 aacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||| ||||| ||||||    
T  13601375 aacacaagaaggggggttgaatcgtgttagctttttcttagttttctcctaagctgaaa 13601433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 20819483 - 20819557
Alignment:
Q  87 taatcctaattgtatttacacgctataaaattgagttgaattcgaattattttagcgtttaaataaacatctttg 161  Q
    |||||| ||||| | |||||| ||||||||||||||| ||||||||| ||||| || ||||||| ||||||||||    
T  20819483 taatccgaattgcacttacaccctataaaattgagttaaattcgaatgattttggcatttaaatgaacatctttg 20819557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 29537821 - 29537887
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||  |||||||||||||||||||||||||||||| | ||||| ||||||    
T  29537821 tgagaaaaacacaagaagggatggttgaattgtgttagttttttcttcgtttactcctaagctgaaa 29537887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 13435086 - 13435151
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||| ||||||||||||||||||||||||| | |||||||| |||||| ||||| ||||||    
T  13435086 tgagaaaaaaacaagaaggggggttgaattgtgtttgctttttctttgttttctcctaagctgaaa 13435151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 16332936 - 16332989
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  16332936 aaaacacaagaaggggggttgaattgtgttggctttttcttctttttctcctaa 16332989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 10631327 - 10631403
Alignment:
Q  173 aacatgaatatgagtaaaacacaagaaggg-gggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||||||  |||| |||||||||||| || ||||||||||||||||| ||||||||| ||||| ||||| ||||||    
T  10631327 aacatgaaggtgagaaaaacacaagaatggagggttgaattgtgttagctttttcttctttttctcctaagctgaaa 10631403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 24398054 - 24398105
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||| ||||    
T  24398054 tgagtaaaacacaataaggggagttgaattgtgttagatttttcttcttttt 24398105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 15532579 - 15532513
Alignment:
Q  183 tgagtaaaacacaagaagg-ggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||  |||||||||||||||||| ||||||||| ||||| ||||| ||||||    
T  15532579 tgagaaaaacacaagaagaaggggttgaattgtgttagctttttcttctttttctcctaagctgaaa 15532513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 17304216 - 17304116
Alignment:
Q  183 tgagtaaaacacaagaa----ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcacactttagaacctgatagagttcagct 278  Q
    |||| ||||||||||||    |||||||||||||||||||| ||||||||||||||| |||  |||||| ||||   | |||| | ||||||||||||||    
T  17304216 tgagaaaaacacaagaagggtggggggttgaattgtgttagctttttcttcgttttctcct--actgaagtcactgatcagaagcagatagagttcagct 17304119  T
Q  279 tct 281  Q
    |||    
T  17304118 tct 17304116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 17380763 - 17380829
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||| |||||||||||||| | ||||||||| ||||| ||||| ||||||    
T  17380763 tgagaaaaacacaagaagggggggttgaattgtgttggctttttcttctttttctcctaagctgaaa 17380829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 21624292 - 21624358
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||| |||||||||||||| | ||||||||| ||||| ||||| ||||||    
T  21624292 tgagaaaaacacaagaagggggggttgaattgtgttggctttttcttctttttctcctaagctgaaa 21624358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 22801345 - 22801402
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||  |||||||||||    
T  22801345 tgagaaaaacacaagaagggg-gttgaattgtgttagctttttcttatttttcacctaa 22801402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 25593275 - 25593337
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||  ||||||||||||||||||| |||||||||||||||| ||||| ||||||    
T  25593275 tgagaaaaacacaag--ggggggttgaattgtgtta-ttttttcttcgttttctcctaagctgaaa 25593337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 32335034 - 32335080
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttc 229  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||    
T  32335034 tgagaaaaacacaagaaagggggttgaattgtgttagctttttcttc 32335080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 15986557 - 15986621
Alignment:
Q  176 atgaatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||| |||| ||||||||||||||||| | ||||||| |||  |||||||||||||||||||||    
T  15986557 atgaatgtgagaaaaacacaagaaggggg-tcgaattgtattaactttttcttcgttttcacctaa 15986621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 26588800 - 26588845
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttctt 228  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||    
T  26588800 tgagaaaaacacaagaatgggggttgaattgtgttagctttttctt 26588845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 14733045 - 14733005
Alignment:
Q  201 gggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  14733045 gggggttgaattgtgttagctttttcttcgttttctcctaa 14733005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 15395608 - 15395556
Alignment:
Q  183 tgagtaaaacacaagaag-gggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  15395608 tgagcaaaacacaagaagagggggttgaattgtgttagctttttcttcttttt 15395556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 19875073 - 19875117
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttct 227  Q
    |||| |||||||| ||||||||||||||||||||||| |||||||    
T  19875073 tgagaaaaacacatgaaggggggttgaattgtgttagatttttct 19875117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 20113565 - 20113517
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||| | ||||||||||||||| ||||| ||||||    
T  20113565 ggggggttgaattgtgtttgctttttcttcgttttctcctaagctgaaa 20113517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 19687934 - 19687981
Alignment:
Q  183 tgagtaaaacacaagaag-gggggttgaattgtgttagttttttcttc 229  Q
    |||| ||||||||||||| ||||||||||||||||| |||||||||||    
T  19687934 tgagaaaaacacaagaagagggggttgaattgtgttggttttttcttc 19687981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 7752075 - 7752041
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  7752075 tgagaaaaacacaagaaggggggttgaattgtgtt 7752041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 12352938 - 12352972
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  12352938 tgagaaaaacacaagaaggggggttgaattgtgtt 12352972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 16124370 - 16124336
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  16124370 tgagaaaaacacaagaaggggggttgaattgtgtt 16124336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 19066963 - 19066917
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttctt 228  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||||    
T  19066963 tgagaaaaacacaagaaggggggcttgaattgtgttagctttttctt 19066917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 19453504 - 19453470
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  19453504 tgagaaaaacacaagaaggggggttgaattgtgtt 19453470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 19833936 - 19833902
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  19833936 tgagaaaaacacaagaaggggggttgaattgtgtt 19833902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 21234356 - 21234422
Alignment:
Q  183 tgagtaaaacacaagaa-ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||| ||||||| |||||||||||||||||||| |||||| || ||||| ||||| ||||||    
T  21234356 tgagaaaaatacaagaatggggggttgaattgtgttagctttttcctctttttctcctaagctgaaa 21234422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 28252400 - 28252366
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  28252400 tgagaaaaacacaagaaggggggttgaattgtgtt 28252366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 32756762 - 32756796
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  32756762 tgagaaaaacacaagaaggggggttgaattgtgtt 32756796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 33866504 - 33866538
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  33866504 tgagaaaaacacaagaaggggggttgaattgtgtt 33866538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 27167270 - 27167241
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgtt 217  Q
    ||||||||||||||||||||||||||||||    
T  27167270 aaaacacaagaaggggggttgaattgtgtt 27167241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 30372578 - 30372623
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttctt 228  Q
    |||| |||||||||||| ||||||||||||||||||  ||||||||    
T  30372578 tgagaaaaacacaagaaagggggttgaattgtgttaactttttctt 30372623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 30451935 - 30451903
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtg 215  Q
    |||| ||||||||||||||||||||||||||||    
T  30451935 tgagaaaaacacaagaaggggggttgaattgtg 30451903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 49605131 - 49605270
Alignment:
Q  38 gattatataatctgaatttcacttacaccttagttaagttcagattatataatcctaattgtatttacacgctataaaattgagttgaattcgaattatt 137  Q
    ||||||||||||| ||||  ||||||||| ||||||| ||| ||||||||||||  ||||||  |||||| |||||||||||||||||||||||||||||    
T  49605131 gattatataatctaaattgtacttacaccctagttaaattcggattatataatctaaattgtgcttacaccctataaaattgagttgaattcgaattatt 49605230  T
Q  138 ttagcgtttaaataaacatctttggcatatagtataacat 177  Q
    ||||||||||||  ||||||||| || || |||| |||||    
T  49605231 ttagcgtttaaaagaacatctttcgcgtaaagtaaaacat 49605270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 281
Target Start/End: Original strand, 15560474 - 15560567
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcacactttagaacctgatagagttcagcttct 281  Q
    |||||||||||||||||||||||||||||| | |||||||| |||||| ||||||||||| ||||  || ||||||| ||||||||||||||||    
T  15560474 aaaacacaagaaggggggttgaattgtgtttgctttttctttgttttctcctaaactgaagtcactgttcagaacctaatagagttcagcttct 15560567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 19611282 - 19611220
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactg 245  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19611282 tgagaaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttctcctaaactg 19611220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 6640890 - 6640943
Alignment:
Q  182 atgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttc 235  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  6640890 atgagaaaaacacaagaaggggggttgaattgtgttagctttttcttcgttttc 6640943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 15134918 - 15134970
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttc 235  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  15134918 tgagaaaaacacaagaaggggggttgaattgtgttagttatttcttcgttttc 15134970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 12599948 - 12600019
Alignment:
Q  177 tgaatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||| |||| |||||| |||||||||| |||||||||||||| ||||||||||||||| ||||| ||||||    
T  12599948 tgaatgtgagaaaaacataagaagggggattgaattgtgttagctttttcttcgttttctcctaagctgaaa 12600019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 12692931 - 12692881
Alignment:
Q  110 tataaaattgagttgaattcgaattattttagcgtttaaataaacatcttt 160  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  12692931 tataaaattgagttgaattcgaattatttaagcgtttaaatgaacatcttt 12692881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 37986504 - 37986458
Alignment:
Q  202 ggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  37986504 ggggttgaattgtgttagttttttcttcgttttctcctaaactgaaa 37986458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 40859906 - 40859963
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  40859906 tgagaaaaacacaagaaggggggttgaattgtgttagctttttcttctttttctccta 40859963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 14605817 - 14605751
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||| ||||||    
T  14605817 tgagaaaaacacaagaaggggggattgaattgtgttagctttttattcgttttctcctaagctgaaa 14605751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 16631637 - 16631703
Alignment:
Q  183 tgagtaaaacacaagaag-gggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||||||    
T  16631637 tgagaaaaacacaagaagagggggttgaattgtgttggttttttcttccttttctcctaagctgaaa 16631703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 41115722 - 41115665
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| ||||||||||||||||| |||||||||||||  ||||||||||||||| ||||    
T  41115722 tgagaaaaacacaagaagggggtttgaattgtgttaactttttcttcgttttctccta 41115665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 54679060 - 54679125
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||| ||||| ||||| ||||||    
T  54679060 tgagaaaaacacaagaaggggggttgaattgtgttttctttttcttctttttctcctaagctgaaa 54679125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 38513117 - 38513157
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttctt 228  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  38513117 aaaacacaagaaggggggttgaattgtgttagctttttctt 38513157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 17399590 - 17399531
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||    
T  17399590 tgagaaaaacacaagaagggggggttgaattgtgttaggtttttcttctttttctcctaa 17399531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 18773288 - 18773339
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  18773288 tgagaaaaacacaagaaagggggttgaatcgtgttagttttttcttcttttt 18773339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 24628808 - 24628742
Alignment:
Q  183 tgagtaaaacacaagaaggggg-gttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||| ||||||||| || ||||||||||||||| ||||||||||||||| ||||| ||||||    
T  24628808 tgagaaaaatacaagaaggaggagttgaattgtgttagctttttcttcgttttctcctaagctgaaa 24628742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 56033726 - 56033792
Alignment:
Q  183 tgagtaaaacacaagaaggg-gggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||| || ||||||||||||||| ||||||||||| ||||| ||||| ||||||    
T  56033726 tgagaaaaacacaagaatggagggttgaattgtgttggttttttcttctttttctcctaagctgaaa 56033792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 3500563 - 3500518
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttctt 228  Q
    |||| |||||||||||||||||||||||||||||||  ||||||||    
T  3500563 tgagaaaaacacaagaaggggggttgaattgtgttaactttttctt 3500518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 11900325 - 11900403
Alignment:
Q  201 gggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcacactttagaacctgatagagttcagcttct 281  Q
    ||||||||||||||||||||||||| ||||||||  |||  |||||||||||  || |||| | |||||||||||| ||||    
T  11900325 gggggttgaattgtgttagtttttttttcgttttttcct--actgaaatcactgttcagaagcagatagagttcagattct 11900403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 17788943 - 17788890
Alignment:
Q  188 aaaacacaagaaggggg-gttgaattgtgttagttttttcttcgttttcaccta 240  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||||    
T  17788943 aaaacacaagaagtgggagttgaattgtgtttgttttttcttcgttttctccta 17788890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 18393804 - 18393857
Alignment:
Q  182 atgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttcgtttt 234  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||| ||||    
T  18393804 atgagaaaaacacaagaaggggagattgaattgtgttagttttttcttcttttt 18393857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 19621883 - 19621842
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  19621883 ggggggttgaattgtgttagctttttcttcgttttctcctaa 19621842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 19883909 - 19883950
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||||||||||||| ||||| |||||    
T  19883909 ggggggttgaattgtgttagttttttcttctttttctcctaa 19883950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 22676469 - 22676405
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||||||| |||||||||| | ||||||||| ||||| ||||| ||||||    
T  22676469 tgagaaaaacacaagaaggggggt-gaattgtgttggctttttcttctttttctcctaagctgaaa 22676405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 23749721 - 23749790
Alignment:
Q  183 tgagtaaaacacaagaagggggg----ttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||| |    |||||||||||||| ||||||||||||||| ||||| ||||||    
T  23749721 tgagaaaaacacaagaaggggaggggattgaattgtgttagctttttcttcgttttctcctaagctgaaa 23749790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 29681421 - 29681362
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||||||||| || ||||||||| ||||||| ||||||||||||||| ||||| ||||||    
T  29681421 aaaacacaaga-ggtgggttgaatagtgttagctttttcttcgttttctcctaagctgaaa 29681362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 55379516 - 55379576
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||| |||||||| ||||||||||| ||||||| |||| ||||| ||||| ||||||    
T  55379516 aaaacacaggaagggggtttgaattgtgtgagtttttccttcattttctcctaagctgaaa 55379576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 9752458 - 9752411
Alignment:
Q  183 tgagtaaaacacaagaa-ggggggttgaattgtgttagttttttcttc 229  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||||    
T  9752458 tgagaaaaacacaagaatggggggttgaattgtgttagctttttcttc 9752411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 13890048 - 13890087
Alignment:
Q  195 aagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    ||||||||||||||||||||||||| ||||||||| ||||    
T  13890048 aagaaggggggttgaattgtgttagatttttcttcttttt 13890087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 17058020 - 17057973
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttc 229  Q
    |||| |||||||||||||||||| |||||||||||||| |||||||||    
T  17058020 tgagaaaaacacaagaagggggggttgaattgtgttagctttttcttc 17057973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 17527288 - 17527237
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||| ||||||| ||||||||||||||||| ||||||||| ||||    
T  17527288 tgagaaaaacaaaagaaggcgggttgaattgtgttagctttttcttcttttt 17527237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 22089484 - 22089534
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||||||| ||||||||||||||  ||||||||||||||    
T  22089484 tgagaaaaacacaagaagggg-gttgaattgtgttaactttttcttcgtttt 22089534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 24618893 - 24618944
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| ||||||||||||||| |||||||||||||||| || |||||| ||||    
T  24618893 tgagaaaaacacaagaagggcggttgaattgtgttagcttattcttcttttt 24618944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 3106318 - 3106267
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    ||||||||||||||||  |||||||||||||| ||||||||| ||||| |||||    
T  3106318 aaaacacaagaagggg--ttgaattgtgttagctttttcttctttttctcctaa 3106267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 5872802 - 5872836
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  5872802 tgagaaaaacacaagaaggggggttgaattgtgtt 5872836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 11514465 - 11514499
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  11514465 tgagaaaaacacaagaaggggggttgaattgtgtt 11514499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 11914882 - 11914937
Alignment:
Q  195 aagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcac 252  Q
    |||||||||| |||||||||||||  ||||||||||||||| |||  |||||||||||    
T  11914882 aagaagggggattgaattgtgttaactttttcttcgttttctcct--actgaaatcac 11914937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 13026989 - 13027023
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  13026989 tgagaaaaacacaagaaggggggttgaattgtgtt 13027023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 14836933 - 14836899
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  14836933 tgagaaaaacacaagaaggggggttgaattgtgtt 14836899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 16325399 - 16325353
Alignment:
Q  189 aaacacaagaagggggg-ttgaattgtgttagttttttcttcgtttt 234  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||    
T  16325399 aaacacaagaagggggggttaaattgtgttagttttttcttcttttt 16325353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 19570446 - 19570480
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  19570446 tgagaaaaacacaagaaggggggttgaattgtgtt 19570480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 19665568 - 19665631
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||  ||| ||||| |||||||||| ||||||||||||||| ||||| ||||||    
T  19665568 tgagaaaaacacaag--gggaggttggattgtgttagatttttcttcgttttctcctaagctgaaa 19665631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 20571918 - 20571876
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagtttttt 225  Q
    |||| |||||| ||||||||||||||||||||||||| |||||    
T  20571918 tgagaaaaacaaaagaaggggggttgaattgtgttagcttttt 20571876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 23120751 - 23120801
Alignment:
Q  198 aaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||||| ||||||||| ||||| ||||| ||||||    
T  23120751 aaggagggttgaattgtgttagctttttcttcattttctcctaagctgaaa 23120801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 29120566 - 29120632
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||| |||||||||||||| | ||| ||||| ||||| ||||| ||||||    
T  29120566 tgagaaaaacacaagaagggggggttgaattgtgttggctttctcttctttttctcctaagctgaaa 29120632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 31267621 - 31267587
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  31267621 tgagaaaaacacaagaaggggggttgaattgtgtt 31267587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 33377569 - 33377603
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  33377569 tgagaaaaacacaagaaggggggttgaattgtgtt 33377603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 274
Target Start/End: Original strand, 3792550 - 3792623
Alignment:
Q  201 gggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcacactttagaacctgatagagttc 274  Q
    ||||||||||||||||| | ||||||||| ||||| ||||| |||||| |||   |||||| | ||||||||||    
T  3792550 gggggttgaattgtgttggctttttcttctttttctcctaagctgaaaacactgcttagaagcagatagagttc 3792623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 4947773 - 4947802
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgtt 217  Q
    ||||||||||||||||||||||||||||||    
T  4947773 aaaacacaagaaggggggttgaattgtgtt 4947802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 10072085 - 10072147
Alignment:
Q  183 tgagtaaaacacaagaagggg----ggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| ||||||||||||||||    |||||||||||||||| ||||||||| ||||| |||||    
T  10072085 tgagaaaaacacaagaaggggagggggttgaattgtgttagctttttcttctttttctcctaa 10072147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 13692999 - 13693044
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttctt 228  Q
    |||| |||||||||||||||||||  ||||||||||| ||||||||    
T  13692999 tgagaaaaacacaagaaggggggtcaaattgtgttagatttttctt 13693044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 14905231 - 14905170
Alignment:
Q  188 aaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||||||| |||||||| |||||||||||| | ||||||||| ||||| ||||| ||||||    
T  14905231 aaaacacaacaaggggggattgaattgtgttggctttttcttctttttctcctaagctgaaa 14905170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 17199316 - 17199287
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgtt 217  Q
    ||||||||||||||||||||||||||||||    
T  17199316 aaaacacaagaaggggggttgaattgtgtt 17199287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 18078732 - 18078703
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgtt 217  Q
    ||||||||||||||||||||||||||||||    
T  18078732 aaaacacaagaaggggggttgaattgtgtt 18078703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 25656566 - 25656595
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgtt 217  Q
    ||||||||||||||||||||||||||||||    
T  25656566 aaaacacaagaaggggggttgaattgtgtt 25656595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 36470133 - 36470174
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||  ||||||||||||||| |||||    
T  36470133 ggggggttgaattgtgttatctttttcttcgttttctcctaa 36470174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 37436439 - 37436398
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttt 224  Q
    |||| |||||||||||||||||||| ||||||||| ||||||    
T  37436439 tgagaaaaacacaagaaggggggttaaattgtgttggttttt 37436398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 8686343 - 8686298
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttc 235  Q
    |||||||||||  ||||||||||||||||| | |||||||||||||||    
T  8686343 aaaacacaaga--gggggttgaattgtgtttgctttttcttcgttttc 8686298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 14154900 - 14154864
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttag 219  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  14154900 tgagaaaaacacaagagggggggttgaattgtgttag 14154864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 43357513 - 43357565
Alignment:
Q  175 catgaatatgagtaaaacacaagaagg-ggggttgaattgtgttagttttttc 226  Q
    |||||| ||||| |||||||||||||| ||||||||| |||||| ||||||||    
T  43357513 catgaaaatgagaaaaacacaagaaggaggggttgaaatgtgttggttttttc 43357565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 426504 - 426371
Alignment:
Q  30 gaaattcagattatataatctgaatttcacttacaccttagttaag---ttcagattatataatcctaattgtatttacacgctataaaattgagttgaa 126  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||    ||| ||||||||||| | || || | |||||| ||||||||||||||||||    
T  426504 gaaattcggattatataatccgaatttcacttacaccctagttaaaaaattcggattatataatacgaaatgcacttacaccctataaaattgagttgaa 426405  T
Q  127 ttcgaattattttagcgtttaaataaacatcttt 160  Q
    |||| ||||||||||||||||||| |||||||||    
T  426404 ttcggattattttagcgtttaaatgaacatcttt 426371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 426460 - 426504
Alignment:
Q  13 ttaactaaggtgtaagtgaaattcagattatataatctgaatttc 57  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||    
T  426460 ttaactagggtgtaagtgaaattcggattatataatccgaatttc 426504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 16502 - 16398
Alignment:
Q  38 gattatataatctgaatttcacttacaccttagttaagttcagattatataatcctaattgtatttacacgctataaaattgagttgaattcgaattatt 137  Q
    |||||||||||| |||||||||||||||| ||||||| |||| |||||||||| | ||  ||| || |||  ||||||||||||||||||||||||||||    
T  16502 gattatataatccgaatttcacttacaccatagttaaattcatattatataattcgaagcgtacttgcaccatataaaattgagttgaattcgaattatt 16403  T
Q  138 ttagc 142  Q
    |||||    
T  16402 ttagc 16398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16454 - 16502
Alignment:
Q  1 tataatctgaacttaactaaggtgtaagtgaaattcagattatataatc 49  Q
    |||||| |||| ||||||| |||||||||||||||| ||||||||||||    
T  16454 tataatatgaatttaactatggtgtaagtgaaattcggattatataatc 16502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 16606699 - 16606790
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcacactttagaacctgatagagttcagcttctaagatgatgt 291  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||| ||||||| ||| ||| |||||||||||||||| | |||||||    
T  16606699 ggggggttgaattgtgttgtttttttcttcgttttctcctaaactgaaaacacacttcagagcctcatagagttcagcttctgaaatgatgt 16606790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 31487409 - 31487474
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||    
T  31487409 tgagaaaaacacaagaaggggggttgaattgtgttggttttttcttcgttttctcctaagctgaaa 31487474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 21100686 - 21100621
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  21100686 tgagaaaagcacaagaaggggggttgaattgtgttagttttttcttcattttctcctaagctgaaa 21100621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 21199947 - 21199890
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  21199947 tgagaaaaacacaagaaggggggttgaattgtgttagctttttcttcgttttctccta 21199890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 22000963 - 22000898
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| ||||||    
T  22000963 tgagaaaaacacaagaaggggggttgagttgtgttagctttttcttcgttttctcctaagctgaaa 22000898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 6498517 - 6498606
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcacactttagaacctgatagagttc 274  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||||||||| ||||| |||||| |||   |||||| | ||||||||||    
T  6498517 tgagtaaaacacaaga--gggggttgaattgtgttagctttttcttcgttttctcctaagctgaaaacactgattagaagcagatagagttc 6498606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 23413919 - 23413847
Alignment:
Q  177 tgaatatgagtaaaacacaagaaggggg-gttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||| |||||||||||| |||| ||||||||||||||| ||||||||||||||| ||||| ||||||    
T  23413919 tgaatatgagaaaaacacaagaatggggagttgaattgtgttagctttttcttcgttttctcctaagctgaaa 23413847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 21076126 - 21076056
Alignment:
Q  176 atgaatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactga 246  Q
    |||||| |||| |||||||||||||| |||||||||| |||||| ||||||||||||||| ||||| ||||    
T  21076126 atgaatgtgagaaaaacacaagaaggagggttgaattatgttagctttttcttcgttttctcctaagctga 21076056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 7746627 - 7746567
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||||||| |||||||||||||||||||| | ||||||||||||||| ||||| ||||||    
T  7746627 aaaacacaataaggggggttgaattgtgtttgctttttcttcgttttctcctaagctgaaa 7746567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 27276653 - 27276602
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  27276653 tgagaaaaacacaagaaggggggttgaattgtgttagatttttcttcttttt 27276602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 9399550 - 9399484
Alignment:
Q  183 tgagtaaaacacaagaaggg-gggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||| || ||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  9399550 tgagaaaaacacaagaaaggagggttgaattgtgttagttttttcttcattttctcctaagctgaaa 9399484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 22910550 - 22910496
Alignment:
Q  109 ctataaaattgagttgaattcgaattattttagcgtttaaataaacatctttggc 163  Q
    |||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||    
T  22910550 ctataaaattgatttgaattcggattattttagtgtttaaatgaacatctttggc 22910496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 17814168 - 17814229
Alignment:
Q  188 aaaacacaagaaggggg-gttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||  |||| ||||||    
T  17814168 aaaacacaagaagggagagttgaattgtgttagttttttcttcgttttcttctaagctgaaa 17814229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 15516176 - 15516227
Alignment:
Q  190 aacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  15516176 aacacaagaaggggggttgaattgtgttggctttttcttctttttctcctaa 15516227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 31589930 - 31589879
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| ||||||||| |||||||||||||||||||||| ||||||||| ||||    
T  31589930 tgagaaaaacacaataaggggggttgaattgtgttagctttttcttcttttt 31589879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 3246397 - 3246339
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||| ||||| |||||    
T  3246397 tgagaaaaacacaagaaggggggttgaattgtgttttctttttcttctttttctcctaa 3246339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 6513367 - 6513301
Alignment:
Q  183 tgagtaaaacacaagaagg-ggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||| |||||||||||||||| | ||||||||||||||| | ||| ||||||    
T  6513367 tgagaaaaacacaagaaggaggggttgaattgtgttggctttttcttcgttttctcttaagctgaaa 6513301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 35932943 - 35932885
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||    
T  35932943 tgagaaaaacacaagaaggggaggttgaattgtgttagctttttcttctttttctccta 35932885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 90369 - 90305
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||| | || |||||||||||||| ||||||||||||||| ||||| ||||||    
T  90369 tgagaaaaacacaagaatgagg-ttgaattgtgttagctttttcttcgttttctcctaagctgaaa 90305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 643635 - 643594
Alignment:
Q  182 atgagtaaaacacaagaaggggggttgaattgtgttagtttt 223  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  643635 atgagaaaaacacaagaagggggattgaattgtgttagtttt 643594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 13737038 - 13736977
Alignment:
Q  188 aaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||| ||||| | |||||||||||||||| ||||||||| ||||| ||||||||||||    
T  13737038 aaaacacaggaaggagaggttgaattgtgttagctttttcttctttttctcctaaactgaaa 13736977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 25097977 - 25097920
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| ||||||||||||||| ||||||||| |||| | ||||||||||||||| ||||    
T  25097977 tgagaaaaacacaagaagggtggttgaattatgtttgctttttcttcgttttctccta 25097920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 25157069 - 25157012
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| ||||||||||||||| ||||||||| |||| | ||||||||||||||| ||||    
T  25157069 tgagaaaaacacaagaagggtggttgaattatgtttgctttttcttcgttttctccta 25157012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 37395368 - 37395433
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||| | ||| ||||| ||||||    
T  37395368 tgagaaaaacacaagaaggggggttgaattgtgtttactttttcttcttcttctcctaagctgaaa 37395433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 33021851 - 33021895
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttct 227  Q
    |||| |||||||||||||||||||||||||||||| | |||||||    
T  33021851 tgagaaaaacacaagaaggggggttgaattgtgttggctttttct 33021895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 42242817 - 42242861
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttct 227  Q
    |||| |||||||||||||||||||||||||||||| | |||||||    
T  42242817 tgagaaaaacacaagaaggggggttgaattgtgttggctttttct 42242861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 19546449 - 19546402
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaa 247  Q
    |||||||||||||||||| ||||||||||||||| | ||||| |||||    
T  19546449 ggggggttgaattgtgttggttttttcttcgtttcctcctaagctgaa 19546402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 23248401 - 23248484
Alignment:
Q  80 gattatataatcctaattgtatttacacgctataaaattgagttgaattcgaattattttagcgtttaaataaacatctttggc 163  Q
    |||||| |||||  ||||| | ||||||  |||| || ||| |||||||||||| ||||||| |||||||| ||||||||||||    
T  23248401 gattatgtaatctgaattgcacttacaccgtatataaatgatttgaattcgaataattttagtgtttaaatgaacatctttggc 23248484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 26120754 - 26120704
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| ||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  26120754 tgagaaaaacacaagaaggggg-ttgaattgtgttagctttttcttcttttt 26120704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 28335262 - 28335353
Alignment:
Q  32 aattcagattatataatctgaatttcacttacaccttagttaagttcagattatataatcctaattgtatttacacgctataaaattgagtt 123  Q
    ||||| |||||||||||  |||||  |||||| || ||||||| ||| |||||||||||   ||||||| |||||| ||||||||| |||||    
T  28335262 aattcggattatataattcgaattgtacttacgccctagttaaattcggattatataatttgaattgtacttacaccctataaaatcgagtt 28335353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 39799747 - 39799697
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| ||||||||||||||| | |||||||||||||||||||||||| ||||    
T  39799747 tgagaaaaacacaagaagggag-ttgaattgtgttagttttttcttcttttt 39799697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 13533182 - 13533216
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  13533182 tgagaaaaacacaagaaggggggttgaattgtgtt 13533216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 17456627 - 17456661
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  17456627 tgagaaaaacacaagaaggggggttgaattgtgtt 17456661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 21702439 - 21702473
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  21702439 tgagaaaaacacaagaaggggggttgaattgtgtt 21702473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 23342738 - 23342772
Alignment:
Q  21 ggtgtaagtgaaattcagattatataatctgaatt 55  Q
    ||||||||||||||||||||||||||||| |||||    
T  23342738 ggtgtaagtgaaattcagattatataatccgaatt 23342772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 23342772 - 23342738
Alignment:
Q  32 aattcagattatataatctgaatttcacttacacc 66  Q
    ||||| |||||||||||||||||||||||||||||    
T  23342772 aattcggattatataatctgaatttcacttacacc 23342738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 23477577 - 23477611
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  23477577 tgagaaaaacacaagaaggggggttgaattgtgtt 23477611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 40033717 - 40033683
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  40033717 tgagaaaaacacaagaaggggggttgaattgtgtt 40033683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 12353783 - 12353734
Alignment:
Q  199 aggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||||||||||||||||||  |||||||||| |||| ||||| ||||||    
T  12353783 aggggggttgaattgtgttaactttttcttcgatttctcctaagctgaaa 12353734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 29139339 - 29139298
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttc 229  Q
    |||||||||||||||||||||||| ||||| | |||||||||    
T  29139339 aaaacacaagaaggggggttgaatcgtgttggctttttcttc 29139298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 31146530 - 31146482
Alignment:
Q  191 acacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||| ||||    
T  31146530 acacaagaaggggg-ttgaattgtgttagctttttcttctttttctccta 31146482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 281
Target Start/End: Original strand, 34637763 - 34637804
Alignment:
Q  240 aaactgaaatcacactttagaacctgatagagttcagcttct 281  Q
    |||||||||||||  || ||||||||||||||||||||||||    
T  34637763 aaactgaaatcaccgttcagaacctgatagagttcagcttct 34637804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 32674 - 32597
Alignment:
Q  206 ttgaattgtgttagttttttcttcgttttcacctaaactgaaatcacactttagaacctgatagagttcagcttctaa 283  Q
    |||||||||||| | ||||||||||||||| | |||||||||||||||||| |||| |||||||||||||||||||||    
T  32674 ttgaattgtgtttgatttttcttcgttttctcttaaactgaaatcacacttcagaatctgatagagttcagcttctaa 32597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 36632 - 36697
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  36632 tgagaaaaacacaagaaggggggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 36697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 134692 - 134757
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  134692 tgagaaaaacacaagaaggggggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 17007506 - 17007571
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||    
T  17007506 tgagaaaaacacaagaaggggggttgaattgtgtttgttttttcttcgttttctcctaagctgaaa 17007571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 17541444 - 17541379
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  17541444 tgagaaaaacacaagaaggggggttgaattgtgttagttttttcttcattttctcctaagctgaaa 17541379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 25163267 - 25163332
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  25163267 tgagaaaaacataagaaggggggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 25163332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 12758680 - 12758632
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  12758680 ggggggttgaattgtgttagctttttcttcgttttctcctaaactgaaa 12758632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 13431573 - 13431521
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttc 235  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  13431573 tgagaaaaacacaagaaggggggttgaattgtgttagctttttcttctttttc 13431521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 1210655 - 1210604
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  1210655 tgagaaaaacacaagaaggggggttgaattgtgttagctttttcttcttttt 1210604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 6406957 - 6407015
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||    
T  6406957 tgagaaaaacacaagaatgggggttgaattgtgttggttttttcttctttttctcctaa 6407015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 18676853 - 18676899
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttc 229  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||    
T  18676853 tgagaaaaacacaagaaggggggttgaattgtgttagctttttcttc 18676899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 163
Target Start/End: Original strand, 11457803 - 11457888
Alignment:
Q  78 cagattatataatcctaattgtatttacacgctataaaattgagttgaattcgaattattttagcgtttaaataaacatctttggc 163  Q
    |||||||| |||||| ||||| | |||||| |||||||| ||||||| ||||| |  |||||||||||||||| ||||| ||||||    
T  11457803 cagattatgtaatccgaattgcacttacaccctataaaaatgagttgtattcggaagattttagcgtttaaatgaacatgtttggc 11457888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 30422385 - 30422320
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||| |||||||||||||||| | ||||||||| ||||| ||||| ||||||    
T  30422385 tgagaaaaacacaagaagaggggttgaattgtgtttgctttttcttctttttctcctaagctgaaa 30422320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 36104546 - 36104599
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  36104546 aaaacacaagaaggggggttgaattgtgttggctttttcttcattttctcctaa 36104599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 43773314 - 43773359
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttctt 228  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||    
T  43773314 tgagaaaaacacaagaaggggggttgaattgtgttagctttttctt 43773359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 45539439 - 45539374
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||| ||||| ||||| ||||||    
T  45539439 tgagaaaaacacaagaaggggggttgaattgtgttttctttttcttctttttctcctaagctgaaa 45539374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 18122082 - 18122022
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||||||||||||| | ||||||||| ||||| ||| | ||||||    
T  18122082 aaaacacaagaaggggggttgaattgtgttggctttttcttctttttctccttagctgaaa 18122022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 17287118 - 17287067
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||| ||||    
T  17287118 tgagaaaaacacaagaaggggggttgaattgtgttggctttttcttcttttt 17287067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 19490988 - 19491038
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  19490988 tgagaaaaacacaaga-ggggggttgaattgtgttagttttttcttcttttt 19491038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 23192753 - 23192706
Alignment:
Q  188 aaaacacaagaaggg-gggttgaattgtgttagttttttcttcgtttt 234  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  23192753 aaaacacaagaagggtgggttgaattgtgttagttttttcttcttttt 23192706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 26832285 - 26832367
Alignment:
Q  206 ttgaattgtgttagttttttcttcgttttcacctaaactgaaatcacactttagaacctgatagagttcagcttctaagatgatgt 291  Q
    |||||||||||||| ||||||   |||||| | |||||||||||||||||| || ||||||||||| |||| || | |||||||||    
T  26832285 ttgaattgtgttagatttttc---gttttctcgtaaactgaaatcacacttcagcacctgatagagatcagtttttgagatgatgt 26832367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 40846359 - 40846308
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  40846359 tgagaaaaatacaagaaggggggttgaattgtgttagctttttcttcttttt 40846308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 19957293 - 19957235
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| |||||||||||||||| | |||||||||||||| ||||||||||||||| ||||    
T  19957293 tgagaaaaacacaagaaggggagattgaattgtgttagctttttcttcgttttctccta 19957235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 25850934 - 25850888
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    ||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  25850934 aaaacacaagaagggaggttgaattgtgttagctttttcttcttttt 25850888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 19153237 - 19153285
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||| || |||||||||||| ||||| ||||||    
T  19153237 ggggggttgaattgtgttagcttattcttcgttttctcctaagctgaaa 19153285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 19706726 - 19706766
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  19706726 ggggggttgaattgtgttagctttttcttcgttttctccta 19706766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 24667636 - 24667676
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttctt 228  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  24667636 aaaacacaagaagggtggttgaattgtgttagctttttctt 24667676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 39692758 - 39692802
Alignment:
Q  204 ggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||||    
T  39692758 ggttgaattgtgttaattttttcttcgttttctcctaagctgaaa 39692802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 43638960 - 43639004
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttct 227  Q
    |||| ||||||||||| |||||||||||||||||||| |||||||    
T  43638960 tgagaaaaacacaagagggggggttgaattgtgttagctttttct 43639004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 43644070 - 43644130
Alignment:
Q  174 acatgaatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||||||  |||| |||||| ||||||||||||||||||||||||| ||||| ||| ||||    
T  43644070 acatgaaggtgagaaaaacataagaaggggggttgaattgtgttagcttttttttcatttt 43644130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 18565172 - 18565206
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  18565172 tgagaaaaacacaagaaggggggttgaattgtgtt 18565206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 23185686 - 23185636
Alignment:
Q  198 aaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||| ||||||||||| |||||  |||| ||||||    
T  23185686 aaggggggttgaattgtgttggttttttcttctttttcttctaagctgaaa 23185636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 40214026 - 40213992
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  40214026 tgagaaaaacacaagaaggggggttgaattgtgtt 40213992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 45292039 - 45292085
Alignment:
Q  183 tgagtaaaacacaagaaggggg-gttgaattgtgttagttttttctt 228  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  45292039 tgagaaaaacacaagaagggggagttgaattgtgttagctttttctt 45292085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 9340568 - 9340597
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgtt 217  Q
    ||||||||||||||||||||||||||||||    
T  9340568 aaaacacaagaaggggggttgaattgtgtt 9340597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 19942444 - 19942497
Alignment:
Q  195 aagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||| |||||||||||| |||| | ||||||||||||||| ||||| ||||||    
T  19942444 aagaatgggggttgaattatgttggctttttcttcgttttctcctaagctgaaa 19942497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 31445303 - 31445340
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagtttttt 225  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  31445303 aaaacacaagaatgggggttgaattgtgttggtttttt 31445340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 40002386 - 40002415
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgtt 217  Q
    ||||||||||||||||||||||||||||||    
T  40002386 aaaacacaagaaggggggttgaattgtgtt 40002415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 16188483 - 16188531
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||||||||| ||| ||||  ||||| ||||||    
T  16188483 ggggggttgaattgtgttagttttttattctttttttcctaagctgaaa 16188531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 16376283 - 16376251
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtg 215  Q
    |||| ||||||||||||||||||||||||||||    
T  16376283 tgagaaaaacacaagaaggggggttgaattgtg 16376251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 17687194 - 17687234
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttctt 228  Q
    |||||||||||||||| | ||||||||||||| ||||||||    
T  17687194 aaaacacaagaaggggagctgaattgtgttagctttttctt 17687234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 17796630 - 17796678
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||| | ||||||||| ||||| ||||| ||||||    
T  17796630 ggggggttgaattgtgttggctttttcttctttttctcctaagctgaaa 17796678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 23264565 - 23264517
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||| | ||||||||| ||||| ||||| ||||||    
T  23264565 ggggggttgaattgtgttggctttttcttccttttctcctaagctgaaa 23264517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 4493745 - 4493810
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  4493745 tgagaaaaacacaagaaggggggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 4493810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 138
Target Start/End: Complemental strand, 19522262 - 19522163
Alignment:
Q  39 attatataatctgaatttcacttacaccttagttaagttcagattatataatcctaattgtatttacacgctataaaattgagttgaattcgaattattt 138  Q
    ||||||||||   |||||||||||| || ||||||| ||| ||||||||||||| || |||| |||| | |||||||||||||||||| |||||||||||    
T  19522262 attatataattcaaatttcacttacgccctagttaaattcggattatataatccgaagtgtacttacgctctataaaattgagttgaactcgaattattt 19522163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 1852968 - 1853042
Alignment:
Q  103 tacacgctataaaattgagttgaattcgaattattttagcgtttaaataaacatctttggcatatagtataacat 177  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| || || |||| |||||    
T  1852968 tacaccctataaaattgagttgaattcgaatgattttagcgtttaaatgaacatctttagcgtaaagtaaaacat 1853042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 10884127 - 10884062
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| |||||| ||||| ||||||    
T  10884127 tgagaaaaacacaagaaggggggttgaattgtgttagctttttctttgttttctcctaagctgaaa 10884062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 33604105 - 33604170
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||    
T  33604105 tgagaaaaacacaagaaggggggttgaattgtgttggctttttcttcgttttctcctaagctgaaa 33604170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 11792071 - 11792129
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  11792071 tgagaaaaacacaagaaggggggttgaattgtgttatctttttcttcgttttctcctaa 11792129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 16315495 - 16315429
Alignment:
Q  183 tgagtaaaacacaagaagg-ggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||| |||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  16315495 tgagaaaaacacaagaaggaggggttgaattgtgttaggtttttcttcgttttctcctaagctgaaa 16315429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 19516589 - 19516504
Alignment:
Q  38 gattatataatctgaatttcacttacaccttagttaagttcagattatataatcctaattgtatttacacgctataaaattgagtt 123  Q
    |||||||||||| |||||| ||||||||| | ||||| ||| |||||||||||||  | |||| |||||| |||||||||||||||    
T  19516589 gattatataatccgaatttaacttacaccctggttaaattcggattatataatccagagtgtacttacactctataaaattgagtt 19516504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 13261632 - 13261568
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaa 247  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||||||||| ||||| |||||    
T  13261632 tgagaaaaacacaagaaggggggttgaattgtgttttctttttcttcgttttctcctaagctgaa 13261568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 13902605 - 13902553
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||| ||||    
T  13902605 aaaacacaagaagggaggttgaattgtgttagctttttcttcgttttctccta 13902553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 13259400 - 13259337
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactga 246  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||||||||| ||||| ||||    
T  13259400 tgagaaaaacacaagaaggggggttgaattgtgttttctttttcttcgttttctcctaagctga 13259337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 12367714 - 12367656
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| ||||||||||| |||||||||||||||||||  ||||||||||||||| |||||    
T  12367714 tgagaaaaacacaagacggggggttgaattgtgttatctttttcttcgttttctcctaa 12367656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 13302081 - 13302127
Alignment:
Q  202 ggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  13302081 ggggttgaattgtgttagttttttcttcgttttctcctaagctgaaa 13302127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 30025134 - 30025200
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||| |||||||||||||| | ||||||||||||||| ||||| ||||||    
T  30025134 tgagaaaaacacaagaagggggggttgaattgtgtttgctttttcttcgttttctcctaagctgaaa 30025200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 2499229 - 2499294
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||||| |||||||||||||  ||||||||| ||||| ||||| ||||||    
T  2499229 tgagaaaaacacaagaagggggattgaattgtgttaactttttcttcattttctcctaagctgaaa 2499294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 13731616 - 13731563
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcaca 253  Q
    |||||||||||||||||||| ||||||||||||||| ||||| |||||| ||||    
T  13731616 ggggggttgaattgtgttagctttttcttcgttttctcctaagctgaaaacaca 13731563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 15705445 - 15705392
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  15705445 aaaacacaagaaggggggttgaattgtgttggctttttcttctttttctcctaa 15705392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 16557567 - 16557502
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||| || || ||||| ||||||    
T  16557567 tgagaaaaacacaagaaggggggttgaattgtgttggctttttcttctttatctcctaagctgaaa 16557502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 16608095 - 16608160
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||| || || ||||| ||||||    
T  16608095 tgagaaaaacacaagaaggggggttgaattgtgttggctttttcttctttatctcctaagctgaaa 16608160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 13645669 - 13645717
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  13645669 ggggggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 13645717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 19516487 - 19516419
Alignment:
Q  109 ctataaaattgagttgaattcgaattattttagcgtttaaataaacatctttggcatatagtataacat 177  Q
    |||||||||||||||||||||  | |||||||| |||||||| |||||||||||| || |||| |||||    
T  19516487 ctataaaattgagttgaattcagactattttagtgtttaaatgaacatctttggcgtaaagtaaaacat 19516419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 330852 - 330903
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttt 233  Q
    |||| |||||||||||||||| |||||||||||||| |||||||||||||||    
T  330852 tgagaaaaacacaagaagggggggttgaattgtgttggttttttcttcgttt 330903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 1292253 - 1292312
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||| |||||    
T  1292253 tgagaaaaacacaagaaggggaggttgaattgtgttagctttttcttctttttctcctaa 1292312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 13027908 - 13027850
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| ||||||||||||||| |||||||||||||| | ||||||||| ||||| |||||    
T  13027908 tgagaaaaacacaagaagggaggttgaattgtgtttgctttttcttcattttctcctaa 13027850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 23125162 - 23125208
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttc 229  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||    
T  23125162 tgagaaaaacacaagaaggagggttgaattgtgttagctttttcttc 23125208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 39285497 - 39285439
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||    
T  39285497 tgagaaaaacacaagaaggggggattgaattgtgttacttttttcttcattttctccta 39285439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 10258073 - 10258028
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttctt 228  Q
    |||| |||||| |||||||||||||||| |||||||||||||||||    
T  10258073 tgagaaaaacataagaaggggggttgaaatgtgttagttttttctt 10258028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 21284331 - 21284266
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||||||||||||||||||   ||||||| ||||||  ||||| ||||||    
T  21284331 tgagaaaaacacaagaaggggggttgaattgtgtttactttttctccgttttttcctaagctgaaa 21284266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 23280929 - 23280868
Alignment:
Q  188 aaaacacaagaaggggggtt-gaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||| | |||||||||||| ||||||||| ||||| ||||| ||||||    
T  23280929 aaaacacaagaagggggggtagaattgtgttagatttttcttctttttctcctaagctgaaa 23280868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 32265667 - 32265614
Alignment:
Q  183 tgagtaaaacacaagaaggggg-gttgaattgtgttagttttttcttcgttttc 235  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  32265667 tgagaaaaacacaagaagggggagttgaattgtgttaggtttttcttctttttc 32265614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 33692680 - 33692615
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||| |||||| ||||||||||||||  ||||||||| ||||| ||||| ||||||    
T  33692680 tgagaaaaacacaaaaaggggagttgaattgtgttaactttttcttccttttctcctaagctgaaa 33692615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 48806840 - 48806795
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttctt 228  Q
    |||| |||||||||||||||||||||||||||||||  ||||||||    
T  48806840 tgagaaaaacacaagaaggggggttgaattgtgttatctttttctt 48806795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 1378409 - 1378461
Alignment:
Q  109 ctataaaattgagttgaattcgaattattttagcgtttaaataaacatctttg 161  Q
    |||||||||||| ||||||||| ||||||||||| ||||| ||||||| ||||    
T  1378409 ctataaaattgatttgaattcggattattttagcatttaactaaacatatttg 1378461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 13473449 - 13473379
Alignment:
Q  176 atgaatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||| ||||| |||| |||||||||||  ||||||||||| |||||||||||||||||| ||||| ||||||    
T  13473449 atgaagatgagaaaaatacaagaaggggc-ttgaattgtgt-agttttttcttcgttttctcctaagctgaaa 13473379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 21382385 - 21382349
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttag 219  Q
    |||| ||||||||||||||||||||||||||||||||    
T  21382385 tgagaaaaacacaagaaggggggttgaattgtgttag 21382349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 16464229 - 16464276
Alignment:
Q  188 aaaacacaaga-aggggggttgaattgtgttagttttttcttcgtttt 234  Q
    ||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  16464229 aaaacacaagatatgggggttgaattgtgttagttttttcttcttttt 16464276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 1560000 - 1559966
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  1560000 tgagaaaaacacaagaaggggggttgaattgtgtt 1559966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 4433497 - 4433463
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  4433497 tgagaaaaacacaagaaggggggttgaattgtgtt 4433463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 5001820 - 5001754
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||| || |||| |||| |||||| ||||||||||||||| ||||| ||||||    
T  5001820 tgagaaaaacacaagaagtggaggttaaattatgttagctttttcttcgttttctcctaagctgaaa 5001754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 6045187 - 6045153
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  6045187 tgagaaaaacacaagaaggggggttgaattgtgtt 6045153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 9802285 - 9802330
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttc 229  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||    
T  9802285 tgagaaaaacacaagaagggg-gttgaattgtgttagatttttcttc 9802330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 13034807 - 13034745
Alignment:
Q  188 aaaacacaagaagggggg-ttgaattgtgtta-gttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||| |||||||||||||  |||||||||| ||||| ||||| ||||||    
T  13034807 aaaacacaagaagggggggttgaattgtgttattttttttcttcattttctcctaagctgaaa 13034745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 14746576 - 14746542
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  14746576 tgagaaaaacacaagaaggggggttgaattgtgtt 14746542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 15574560 - 15574506
Alignment:
Q  188 aaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||| |||||||||||| | ||||||||| ||||| |||||    
T  15574560 aaaacacaagaagggggggttgaattgtgttggctttttcttctttttctcctaa 15574506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 18440590 - 18440624
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  18440590 tgagaaaaacacaagaaggggggttgaattgtgtt 18440624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 21211536 - 21211476
Alignment:
Q  183 tgagtaaaacacaagaagggg---ggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| ||||||||||||||||   |||||||||||||||| ||||| ||||||||| ||||    
T  21211536 tgagaaaaacacaagaaggggaggggttgaattgtgttagctttttattcgttttctccta 21211476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 24883300 - 24883266
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  24883300 tgagaaaaacacaagaaggggggttgaattgtgtt 24883266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 48063766 - 48063709
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| ||||||||||||||||| ||||||| || ||||||||||||| ||||| |||||    
T  48063766 tgagaaaaacacaagaaggggg-ttgaattatgctagttttttcttctttttctcctaa 48063709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 11573052 - 11573023
Alignment:
Q  199 aggggggttgaattgtgttagttttttctt 228  Q
    ||||||||||||||||||||||||||||||    
T  11573052 aggggggttgaattgtgttagttttttctt 11573023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 13138883 - 13138830
Alignment:
Q  183 tgagtaaaacacaagaag-gggggttgaattgtgttagttttttcttcgttttc 235  Q
    |||| ||||||||||||| ||||||||||||||||| | ||||||||| |||||    
T  13138883 tgagaaaaacacaagaagagggggttgaattgtgttggctttttcttctttttc 13138830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 33420961 - 33421014
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    ||||||||||| || ||||||||||||||| | ||||||||| ||||| |||||    
T  33420961 aaaacacaagacggagggttgaattgtgttggctttttcttctttttctcctaa 33421014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 12223366 - 12223314
Alignment:
Q  183 tgagtaaaacacaagaaggg-gggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||| || ||||||||||||||||| ||||||||| ||||    
T  12223366 tgagaaaaacacaagaatggagggttgaattgtgttagatttttcttcttttt 12223314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 13681513 - 13681561
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||| |||||| ||||||||||||||| ||||| ||||||    
T  13681513 ggggcgttgaattatgttagatttttcttcgttttctcctaagctgaaa 13681561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 16546277 - 16546229
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||| | ||||||||| ||||| ||||| ||||||    
T  16546277 ggggggttgaattgtgttggctttttcttctttttctcctaagctgaaa 16546229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 16619385 - 16619433
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||| | ||||||||| ||||| ||||| ||||||    
T  16619385 ggggggttgaattgtgttggctttttcttctttttctcctaagctgaaa 16619433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 19238016 - 19237964
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttc 235  Q
    |||| |||||| |||||||||||||||||||||||   ||||||||| |||||    
T  19238016 tgagaaaaacaaaagaaggggggttgaattgtgttttctttttcttcattttc 19237964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 21691623 - 21691690
Alignment:
Q  183 tgagtaaaacacaagaa--ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||  |||||||||||||||||| | ||||||| | ||||| ||||| ||||||    
T  21691623 tgagaaaaacacaagaaagggggggttgaattgtgttggctttttctacattttctcctaagctgaaa 21691690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 40780510 - 40780575
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  40780510 tgagaaaaacacaagaaggagggttgaattgtgttagttttttcttcgttttctcctaagctgaaa 40780575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 20569648 - 20569583
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||    
T  20569648 tgagaaaaacacaagaaggggggttgaattgtgttaactttttcttcgttttctcctaagctgaaa 20569583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 21484387 - 21484304
Alignment:
Q  80 gattatataatcctaattgtatttacacgctataaaattgagttgaattcgaattattttagcgtttaaataaacatctttggc 163  Q
    ||||| ||||||| ||||| | |||||| |||||||||| | ||||||||| || |||||||||||||||| ||||||||||||    
T  21484387 gattacataatccgaattgcacttacaccctataaaattaatttgaattcggatgattttagcgtttaaatgaacatctttggc 21484304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 22797610 - 22797661
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  22797610 tgagaaaaacacaagaaggggggttgaattgtgttagttttttcttcttttt 22797661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 27294691 - 27294750
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  27294691 tgagaaaaacacaagaagggggggttgaattgtgttagttttttcttcgttttctcctaa 27294750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 39038549 - 39038474
Alignment:
Q  173 aacatgaatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||||||  |||| |||| ||||||||||| ||||||||||||||| ||||||||||||||| ||||| ||||||    
T  39038549 aacatgaaggtgagaaaaaaacaagaaggggagttgaattgtgttagctttttcttcgttttctcctaagctgaaa 39038474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 25828355 - 25828413
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  25828355 tgagaaaaacacaagaaggggggttgaattatgttagctttttcttcgttttctcctaa 25828413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 17964202 - 17964137
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||| ||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||    
T  17964202 tgagaaaaacaaaagaaggggggttgaattgtgttaactttttcttcgttttctcctaagctgaaa 17964137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 19539636 - 19539705
Alignment:
Q  166 atagtataacatgaatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttc 235  Q
    |||||| || |||||  |||| |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  19539636 atagtagaatatgaaggtgagaaaaacacaagaaggggggttgaattgtgttagctttttcttcattttc 19539705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 24851571 - 24851506
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||| ||||||||||||||| | ||||||||||||||| ||||| ||||||    
T  24851571 tgagaaaaacacaagaaggagggttgaattgtgtttgctttttcttcgttttctcctaagctgaaa 24851506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 28551828 - 28551767
Alignment:
Q  174 acatgaatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttc 235  Q
    |||||||  |||| |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  28551828 acatgaaggtgagaaaaacacaagaaggggggttgaattgtgttagctttttcttctttttc 28551767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 31328872 - 31328815
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  31328872 tgagaaaaacacaagaaggggggttgaattgtgtttgttttttcttctttttctccta 31328815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 31335593 - 31335536
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  31335593 tgagaaaaacacaagaaggggggttgaattgtgtttgttttttcttctttttctccta 31335536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 22782525 - 22782473
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  22782525 aaaacacaagaaggggggttgaattgtgttagctttttcttctttttctccta 22782473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 22455859 - 22455800
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  22455859 tgagaaaaacacaagaagggggggttgaattgtgttagctttttcttcgttttctcctaa 22455800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 6391867 - 6391913
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttc 229  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||    
T  6391867 tgagaaaaacacaagaaggggggttgaattgtgttggttttttcttc 6391913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 24376318 - 24376384
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||| |||||||||||||||  ||||||||||||||| ||||| ||||||    
T  24376318 tgagaaaaacacaagaagggggggttgaattgtgttaagtttttcttcgttttctcctaagctgaaa 24376384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 16494547 - 16494604
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| |||||||||||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  16494547 tgagaaaaacacaagaaggggggttgaattgggttagctttttcttctttttctccta 16494604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 18377105 - 18377064
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  18377105 ggggggttgaattgtgttagttttttcttcgttttctcctaa 18377064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 28702123 - 28702058
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||| ||||| ||||| ||||||    
T  28702123 tgagaaaaacacaagaaggggggttgaattgtgttttctttttcttctttttctcctaagctgaaa 28702058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 45087896 - 45087831
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||| ||||| ||||| ||||||    
T  45087896 tgagaaaaacacaagaaggggggttgaattgtgttttctttttcttctttttctcctaagctgaaa 45087831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 25188609 - 25188668
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||||||| ||||| ||||||    
T  25188609 aaaacacaagagggggggt-gaattgtgttagctttttcttcgttttctcctaagctgaaa 25188668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 16735868 - 16735817
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||| ||||    
T  16735868 tgagaaaaacacaagaagagaggttgaattgtgttagttttttcttcttttt 16735817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 41122577 - 41122481
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcacactttagaacctgatagagttcagcttct 281  Q
    |||| |||||||||||||| |||||||||||||||   ||||||||||||||| |||  |||||| ||||   | |||| | |||||||||||||||||    
T  41122577 tgagaaaaacacaagaaggagggttgaattgtgtttactttttcttcgttttctcct--actgaagtcactgatcagaagcagatagagttcagcttct 41122481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 24778531 - 24778597
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||| |||||||||||||| | ||||||||||||| | ||||| ||||||    
T  24778531 tgagaaaaacacaagaagggggggttgaattgtgttggctttttcttcgtttactcctaagctgaaa 24778597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 38780603 - 38780655
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    ||||||||||||||||||| |||||||||| ||||||||||| ||||| |||||    
T  38780603 aaaacacaagaaggggggt-gaattgtgttggttttttcttctttttctcctaa 38780655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 14794683 - 14794631
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  14794683 tgagaaaaacacaagaagggggggttgaattgtgtttgttttttcttcttttt 14794631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 22682653 - 22682693
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttctt 228  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  22682653 aaaacacaagaaggggggttgaattgtgttaactttttctt 22682693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 24216982 - 24216950
Alignment:
Q  185 agtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||||||||||||||||||||||||||||||||    
T  24216982 agtaaaacacaagaaggggggttgaattgtgtt 24216950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 24450350 - 24450299
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||| ||||    
T  24450350 tgagaaaaacacaagaaggggggttgaattgtgttttctttttcttcttttt 24450299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 25917919 - 25917966
Alignment:
Q  188 aaaacacaagaaggggggtt-gaattgtgttagttttttcttcgtttt 234  Q
    |||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  25917919 aaaacacaagaaggggggtttgaattgtgttagctttttcttcttttt 25917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 1041534 - 1041568
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  1041534 tgagaaaaacacaagaaggggggttgaattgtgtt 1041568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 1587932 - 1587874
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| ||||||||||||||||||||| ||||| || | ||||||||| ||||| |||||    
T  1587932 tgagaaaaacacaagaaggggggttgcattgtcttggctttttcttctttttctcctaa 1587874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 10010630 - 10010584
Alignment:
Q  202 ggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||| ||||||||||||||||| ||||||||| ||||| ||||||    
T  10010630 ggggttaaattgtgttagtttttttttcgttttctcctaagctgaaa 10010584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 22111549 - 22111511
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttc 226  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  22111549 aaaacaaaagaaggggggttgaattgtgttggttttttc 22111511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 22189007 - 22188949
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| |||||||||||| ||||| |||||||||||| ||||||||||| ||||| ||||    
T  22189007 tgagaaaaacacaagaacgggggattgaattgtgttggttttttcttctttttctccta 22188949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 22257389 - 22257455
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||| || ||||||||||| ||||||||| ||||| || || ||||||    
T  22257389 tgagaaaaacacaagaagggggggttcaattgtgttagctttttcttcattttctccaaagctgaaa 22257455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 24575232 - 24575298
Alignment:
Q  183 tgagtaaaacacaagaaggg-gggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||| |  ||||||||||||||||| ||||||||| ||||| ||||| ||||||    
T  24575232 tgagaaaaacacaagaatgaagggttgaattgtgttagctttttcttcattttctcctaagctgaaa 24575298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 28732747 - 28732713
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  28732747 tgagaaaaacacaagaaggggggttgaattgtgtt 28732713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 37127159 - 37127077
Alignment:
Q  39 attatataatctgaatttcacttacaccttagttaagttcagattatataatcctaattgtatttacacgctataaaattgag 121  Q
    |||||| |||| |||||  ||||||||| |||| || |||  |||||||||||  ||||||| | ||||||||||||||||||    
T  37127159 attatacaatccgaattgtacttacaccctagtaaaattcgaattatataatctgaattgtactcacacgctataaaattgag 37127077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 23185222 - 23185172
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    ||||||||||  |||||||||||||||||||| ||||||||| ||||| ||||    
T  23185222 aaaacacaag--ggggggttgaattgtgttagctttttcttctttttctccta 23185172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 23596485 - 23596435
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    ||||||||||  |||||||||||||||||||| ||||||||| ||||| ||||    
T  23596485 aaaacacaag--ggggggttgaattgtgttagctttttcttctttttctccta 23596435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 29243612 - 29243641
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgtt 217  Q
    ||||||||||||||||||||||||||||||    
T  29243612 aaaacacaagaaggggggttgaattgtgtt 29243641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 14866579 - 14866611
Alignment:
Q  202 ggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||||||||||||||||||||||||||| ||||    
T  14866579 ggggttgaattgtgttagttttttcttcttttt 14866611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 19889893 - 19889782
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcacactttagaacctgatagagttcagcttcta 282  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||| |||   |||||| |  ||||||||| ||||||     
T  19889893 tgagaaaaacacaagaaggggggttgaattttgttagctttttcttcgttttctcctaagctgaaaacactgattagaagcaaatagagttctgcttctg 19889794  T
Q  283 agatgatgtcca 294  Q
    |  |||||||||    
T  19889793 aagtgatgtcca 19889782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 12718552 - 12718637
Alignment:
Q  76 ttcagattatataatcctaattgtatttacacgctataaaattgagttgaattcgaattattttagcgtttaaataaacatctttg 161  Q
    |||| |||||||||||  ||||  | |||||| |||||||||||||||| |||||||||||||||||| |||||| ||||||||||    
T  12718552 ttcaaattatataatcagaatttcacttacaccctataaaattgagttggattcgaattattttagcgattaaatgaacatctttg 12718637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 17239889 - 17239818
Alignment:
Q  177 tgaatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||| |||| |||||| ||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  17239889 tgaatttgagaaaaacataagaatgggggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 17239818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 23539179 - 23539128
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  23539179 tgagaaaaacacaagaagggaggttgaattgtgttagttttttcttcgtttt 23539128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 29854613 - 29854679
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||||||||    
T  29854613 tgagaaaaacacaagaaggggaggttgaattgtgttagctttttcttctttttctcctaaactgaaa 29854679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 1242029 - 1241964
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||||| ||||| ||||| ||||||    
T  1242029 tgagaaaaacacaagaagtggggttgaattgtgttggttttttcttctttttctcctaagctgaaa 1241964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 6089931 - 6089996
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||| |||||||||||||||| |||||| |||||||| ||||| ||||||    
T  6089931 tgagaaaaacacaagaagggaggttgaattgtgttagctttttcatcgttttctcctaagctgaaa 6089996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 12727190 - 12727125
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||| ||||||    
T  12727190 tgagaaaaacacaagaaggagggttgaattgtgttagcttttttttcgttttctcctaagctgaaa 12727125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 14954613 - 14954678
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||| ||||| ||||| ||||||    
T  14954613 tgagaaaaacacaagaaggggggttgaattgtgttggctttttcttctttttctcctaagctgaaa 14954678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 28581298 - 28581363
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||| ||||||    
T  28581298 tgagaaaaacacaagaatgggggttgaattgtgttagctttttcttctttttctcctaagctgaaa 28581363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 49554464 - 49554399
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||    
T  49554464 tgagaaaaacacacgaaggggggttgaattgtgttggttttttcttctttttctcctaagctgaaa 49554399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 49643726 - 49643653
Alignment:
Q  176 atgaatatgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||| ||||| ||||||||||||| || |||||||||||||||| ||||||||||||||| ||||| ||||||    
T  49643726 atgaagatgagaaaaacacaagaagcggaggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 49643653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 52919628 - 52919692
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||    
T  52919628 tgagaaaaacacaagaagggggct-gaattgtgttagttttttcttcgttttctcctaagctgaaa 52919692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 31302557 - 31302609
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  31302557 aaaacacaagaaggggggttgaattgtgttggttttttcttctttttctccta 31302609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 40850180 - 40850239
Alignment:
Q  183 tgagtaaaacacaagaa-ggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||    
T  40850180 tgagaaaaacacaagaacggggggttgaattgtgttagttttttcttctttttctcctaa 40850239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 8875080 - 8875014
Alignment:
Q  183 tgagtaaaacacaagaagg-ggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||||||||||  ||||| ||||||    
T  8875080 tgagaaaaacacaagaaggaggggttgaattgtgttggttttttcttcgttttttcctaagctgaaa 8875014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 17667572 - 17667638
Alignment:
Q  183 tgagtaaaacacaagaa-ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  17667572 tgagaaaaacaaaagaacggggggttgaattgtgttagttttttcttcattttctcctaagctgaaa 17667638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 21639235 - 21639177
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  21639235 tgagaaaaacacaagaaggggggttgaattgtgttggctttttcttctttttctcctaa 21639177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 23334066 - 23333984
Alignment:
Q  81 attatataatcctaattgtatttacacgctataaaattgagttgaattcgaattattttagcgtttaaataaacatctttggc 163  Q
    ||||| |||||| ||||  | |||||| |||||||||||||||||||||  ||||||||||||| ||||| ||||| ||||||    
T  23334066 attatgtaatccgaatttcacttacaccctataaaattgagttgaattcagattattttagcgtgtaaatgaacatttttggc 23333984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 12964040 - 12963975
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||||| ||||| ||| | ||||||    
T  12964040 tgagaaaaacacaagaaggagggttgaattgtgttagctttttcttcattttctcctcagctgaaa 12963975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 12967517 - 12967570
Alignment:
Q  183 tgagtaaaacacaagaaggggg-gttgaattgtgttagttttttcttcgttttc 235  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  12967517 tgagaaaaacacaagaagggggagttgaattgtgttagctttttcttcgttttc 12967570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 13823278 - 13823331
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  13823278 aaaacacaagaaggggggttgaattgtgttggatttttcttctttttctcctaa 13823331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 15902399 - 15902463
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||| ||||| ||||| ||||||    
T  15902399 tgagaaaaacacaagaagggg-gttgaattgtgttagctttttcttctttttctcctaagctgaaa 15902463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 19250342 - 19250285
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| ||||||||||||| |||||||||||||||||| |||| |||||||||| ||||    
T  19250342 tgagaaaaacacaagaagaggggttgaattgtgttagcttttacttcgttttctccta 19250285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 19886032 - 19885967
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||| ||||||||||||| |||||||  ||||||||||||||| ||||| ||||||    
T  19886032 tgagaaaaacacaaaaaggggggttgaaatgtgttatctttttcttcgttttctcctaagctgaaa 19885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 30055125 - 30055072
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  30055125 aaaacacaaaaaggggggttgaattgtgttagtttttttttctttttctcctaa 30055072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 49669434 - 49669381
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||    
T  49669434 aaaacacaagaagggaggttgaattgtgttcgttttttcttctttttctcctaa 49669381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 3237897 - 3237941
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttct 227  Q
    |||| |||||||||||||||||||||||||||||||| |||||||    
T  3237897 tgagaaaaacacaagaaggggggttgaattgtgttagctttttct 3237941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 10493768 - 10493716
Alignment:
Q  109 ctataaaattgagttgaattcgaattattttagcgtttaaataaacatctttg 161  Q
    |||||||||||||||||||||| |||||||||| ||||||||  |||||||||    
T  10493768 ctataaaattgagttgaattcggattattttagagtttaaatgcacatctttg 10493716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 29952374 - 29952326
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  29952374 ggggggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 29952326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 30001528 - 30001480
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  30001528 ggggggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 30001480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 8693084 - 8693131
Alignment:
Q  178 gaatatgagtaaaacacaagaaggggggttgaattgtgttagtttttt 225  Q
    |||| |||| |||||| |||||||||||||||||||||||||||||||    
T  8693084 gaatgtgagaaaaacataagaaggggggttgaattgtgttagtttttt 8693131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 9044953 - 9045000
Alignment:
Q  178 gaatatgagtaaaacacaagaaggggggttgaattgtgttagtttttt 225  Q
    |||| |||| |||||| |||||||||||||||||||||||||||||||    
T  9044953 gaatgtgagaaaaacataagaaggggggttgaattgtgttagtttttt 9045000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 14393950 - 14393891
Alignment:
Q  183 tgagtaaaacacaagaaggggg-gttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||| |||||||||||| ||||||||||||||| ||||||||||||||| |||||    
T  14393950 tgagaaaaatacaagaagggggcgttgaattgtgttagctttttcttcgttttctcctaa 14393891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 2560388 - 2560446
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||||| ||| |||||    
T  2560388 tgagaaaaacacaagaaggggggttgaattgtgtttactttttcttcgtcttctcctaa 2560446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 22770808 - 22770762
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttc 229  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||    
T  22770808 tgagaaaaacacaagaaggggggttgaagtgtgttagctttttcttc 22770762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 46797348 - 46797290
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| ||||||||||||||||||||||| ||||||  |||||||||| ||||| |||||    
T  46797348 tgagaaaaacacaagaaggggggttgaactgtgttgattttttcttctttttctcctaa 46797290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 13781523 - 13781482
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  13781523 ggggggttgaattgtgttagctttttcttcgttttctcctaa 13781482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 41494206 - 41494270
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||| |||||||||||||||| | ||||||||| ||||| ||||| ||||||    
T  41494206 tgagcaaaacacaagaagcggggttgaattgtgttggctttttcttc-ttttctcctaagctgaaa 41494270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 13939116 - 13939164
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||| |||||||| |||||| ||||| ||||||    
T  13939116 ggggggttgaattgtgttagctttttctttgttttctcctaagctgaaa 13939164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 22804974 - 22804917
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||| |||||||||||  ||||||||||||||||||| |||||    
T  22804974 tgagaaaaacacaagaaggggaggttgaattgt--tagttttttcttcgttttctcctaa 22804917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 33582426 - 33582466
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttctt 228  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  33582426 aaaacacaagaaggggggttgaattgtgttggctttttctt 33582466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 38178594 - 38178534
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||| ||||||| ||||||||||||||| | ||||||||| ||||| ||||| ||||||    
T  38178594 aaaacataagaaggagggttgaattgtgttggctttttcttctttttctcctaagctgaaa 38178534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 20628398 - 20628351
Alignment:
Q  201 gggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||||||||||||||||| ||||||||| ||||| ||||| ||||||    
T  20628398 gggggttgaattgtgttagctttttcttctttttctcctaagctgaaa 20628351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 2025299 - 2025333
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  2025299 tgagaaaaacacaagaaggggggttgaattgtgtt 2025333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 4433170 - 4433204
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  4433170 tgagaaaaacacaagaaggggggttgaattgtgtt 4433204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 11189197 - 11189254
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| ||||||||||||||| | |||||||||||| ||||||||||| ||||| |||||    
T  11189197 tgagaaaaacacaagaagggtg-ttgaattgtgttggttttttcttctttttctcctaa 11189254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 13411003 - 13410965
Alignment:
Q  196 agaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  13411003 agaaggggggttgaattgtgttagctttttcttcttttt 13410965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 281
Target Start/End: Original strand, 14310888 - 14310979
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcacactttagaacctgatagagttcagcttct 281  Q
    |||| |||||||||| ||||||||||||||   ||||||||||||||| |||  |||||||||||   | |||| | |||||||| ||||||||    
T  14310888 aaaatacaagaagggaggttgaattgtgttttatttttcttcgttttctcct--actgaaatcactgatcagaagcagatagagtccagcttct 14310979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 15663563 - 15663529
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  15663563 tgagaaaaacacaagaaggggggttgaattgtgtt 15663529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 16076338 - 16076372
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  16076338 tgagaaaaacacaagaaggggggttgaattgtgtt 16076372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 17910831 - 17910797
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  17910831 tgagaaaaacacaagaaggggggttgaattgtgtt 17910797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 17960811 - 17960845
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  17960811 tgagaaaaacacaagaaggggggttgaattgtgtt 17960845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 19888179 - 19888145
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  19888179 tgagaaaaacacaagaaggggggttgaattgtgtt 19888145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 21735582 - 21735616
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  21735582 tgagaaaaacacaagaaggggggttgaattgtgtt 21735616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 22150410 - 22150444
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  22150410 tgagaaaaacacaagaaggggggttgaattgtgtt 22150444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 22465433 - 22465376
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| ||||||||||  |||||||||||||||||||| ||||||||| ||||| |||||    
T  22465433 tgagaaaaacacaagg-ggggggttgaattgtgttagctttttcttccttttctcctaa 22465376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 28165386 - 28165420
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  28165386 tgagaaaaacacaagaaggggggttgaattgtgtt 28165420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 13601648 - 13601677
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgtt 217  Q
    ||||||||||||||||||||||||||||||    
T  13601648 aaaacacaagaaggggggttgaattgtgtt 13601677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 16199983 - 16199933
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcac 252  Q
    |||||||||||||||||| | ||||||||||||||| |||  |||||||||||    
T  16199983 ggggggttgaattgtgttggctttttcttcgttttctcct--actgaaatcac 16199933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 24707378 - 24707349
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgtt 217  Q
    ||||||||||||||||||||||||||||||    
T  24707378 aaaacacaagaaggggggttgaattgtgtt 24707349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 53057679 - 53057634
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttctt 228  Q
    |||| |||||||||||| |||||||||||||||||  |||||||||    
T  53057679 tgagaaaaacacaagaaagggggttgaattgtgttgattttttctt 53057634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 18122585 - 18122545
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||||||||||||||||||||||||||| | ||||| ||||    
T  18122585 ggggggttgaattgtgttagttttttctcctttttctccta 18122545  T

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Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 20645361 - 20645409
Alignment:
Q  188 aaaacacaagaaggggg-gttgaattgtgttagttttttcttcgttttc 235  Q
    |||| ||||||||| || ||||||||||||||| |||||||||||||||    
T  20645361 aaaatacaagaaggaggtgttgaattgtgttagctttttcttcgttttc 20645409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 26418658 - 26418618
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||||||||||||||||| | ||||||||||||||| ||||    
T  26418658 ggggggttgaattgtgtttgctttttcttcgttttctccta 26418618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 40799091 - 40799158
Alignment:
Q  183 tgagtaaaacacaagaaggg--gggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||  |||||||||||||||   ||||||||| ||||| ||||| ||||||    
T  40799091 tgagaaaaacacaagaagggtggggttgaattgtgttttctttttcttctttttctcctaagctgaaa 40799158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 45862561 - 45862521
Alignment:
Q  177 tgaatatgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||| ||||| ||||||||||||||||||||||||    
T  45862561 tgaagatgagaaaaacgcaagaaggggggttgaattgtgtt 45862521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 47206875 - 47206919
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttct 227  Q
    |||| |||||| |||||||| |||||||||||||||| |||||||    
T  47206875 tgagaaaaacataagaagggaggttgaattgtgttagctttttct 47206919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 11402 - 11460
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  11402 tgagaaaaacacaagaaggggggttgaattgtgttagttttttcttctttttctcctaa 11460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 31792 - 31850
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  31792 tgagaaaaacacaagaaggggggttgaattgtgttagctttttcttcgttttctcctaa 31850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 48523 - 48577
Alignment:
Q  188 aaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||| |||||||||||||||| ||||||||| ||||| |||||    
T  48523 aaaacacaagaagggggggttgaattgtgttagctttttcttcattttctcctaa 48577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 8e-18; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 7308992 - 7309050
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  7308992 tgagaaaaacacaagaaggggggttgaattgtgttggttttttcttcgttttctcctaa 7309050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 12625433 - 12625367
Alignment:
Q  174 acatgaatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||||||  |||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  12625433 acatgaaggtgagaaaaacacaagaaggagggttgaattgtgttagttttttcttcgttttctccta 12625367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 20959893 - 20959843
Alignment:
Q  198 aaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  20959893 aaggggggttgaattgtgttagttttttcttcgttttctcctaagctgaaa 20959843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 17025878 - 17025821
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  17025878 tgagaaaaacacaagaaggggggttgaattgtgttagatttttctttgttttctccta 17025821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 30892266 - 30892331
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| ||||  |||| ||||||    
T  30892266 tgagaaaaacacaagaaggggggttgaattgtgttagctttttcttcgatttcttctaagctgaaa 30892331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 33257246 - 33257181
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||| |||| ||||| ||||||    
T  33257246 tgagaaaaacacaagaaggggagttgaattgtgttagctttttcttcgctttctcctaagctgaaa 33257181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 33277418 - 33277353
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||| |||| ||||| ||||||    
T  33277418 tgagaaaaacacaagaaggggagttgaattgtgttagctttttcttcgctttctcctaagctgaaa 33277353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 9345980 - 9346031
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||| ||||    
T  9345980 tgagaaaaacacaagaaggagggttgaattgtgttagttttttcttcttttt 9346031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 24218571 - 24218622
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  24218571 tgagaaaaacacaagaaggggtgttgaattgtgttagttttttcttcttttt 24218622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 32786816 - 32786758
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||||||||||||||||||| ||||| ||| ||||| |||||    
T  32786816 tgagaaaaacacaagaaggggggttgaattgtgttagattttttttctttttctcctaa 32786758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 22153027 - 22153092
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||| ||||| ||| | ||||||    
T  22153027 tgagaaaaacacaagaaggggggttgaattgtgttggctttttcttctttttctccttagctgaaa 22153092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 22202758 - 22202694
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||| |||||| |||||||||||||  ||||||||||||||| ||||||||||||    
T  22202758 tgagaaaaacacaaggaggggg-ttgaattgtgttatctttttcttcgttttctcctaaactgaaa 22202694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 10756634 - 10756686
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttc 235  Q
    |||| ||||||||||||   |||||||||||||||||||||||||||||||||    
T  10756634 tgagaaaaacacaagaatcagggttgaattgtgttagttttttcttcgttttc 10756686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 48571129 - 48571030
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcacactttagaacctgatagagttcagcttcta 282  Q
    |||| |||||||||||| |||||||||||||||||  |||||||||| ||||| ||| ||||||||  |||  |||||| | ||||||||||  ||||||    
T  48571129 tgagaaaaacacaagaatgggggttgaattgtgttgattttttcttctttttctcct-aactgaaaatacagattagaaacagatagagttctacttcta 48571031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 2820147 - 2820096
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||| |||||||| |||||||||||||||||||||||||| ||||    
T  2820147 tgagaaaaacataagaagggaggttgaattgtgttagttttttcttcttttt 2820096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 27857987 - 27858038
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  27857987 tgagaaaaacacaagaaggagggttgaattgtgttagctttttcttcttttt 27858038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 28493183 - 28493140
Alignment:
Q  198 aaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  28493183 aaggggggttgaattgtgttagttttttcttcgtcttctcctaa 28493140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 23975716 - 23975674
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagtttttt 225  Q
    |||| |||||||||||||||||||||||||||||||| |||||    
T  23975716 tgagaaaaacacaagaaggggggttgaattgtgttagcttttt 23975674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 12283596 - 12283660
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||  | |||||||||||||| ||||||||||||||| ||||| ||||||    
T  12283596 tgagaaaaacacaagaaggatg-ttgaattgtgttagctttttcttcgttttctcctaagctgaaa 12283660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 21192756 - 21192703
Alignment:
Q  188 aaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||||||||||||||||| ||||||||||| || ||||||||||||||| ||||    
T  21192756 aaaacacaagaagggggggttgaattgtgtaagctttttcttcgttttctccta 21192703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 29215001 - 29215066
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||| ||||||||| |||||||||| |||||||||||||| |||||  |||| ||||||    
T  29215001 tgagaaaaacataagaaggggtgttgaattgtattagttttttcttctttttcttctaagctgaaa 29215066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 44824625 - 44824572
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||||||||||||| |  |||||||| ||||| |||||    
T  44824625 aaaacacaagaaggggggttgaattgtgttggccttttcttctttttctcctaa 44824572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 46088199 - 46088252
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||| ||||||||||||||||| ||||||| | ||||| |||||    
T  46088199 aaaacacaagaaggagggttgaattgtgttaggtttttctcctttttctcctaa 46088252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 1577050 - 1577102
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttc 235  Q
    |||| |||||| | ||||||||||||||||||||| ||||||||||| |||||    
T  1577050 tgagaaaaacatacgaaggggggttgaattgtgttggttttttcttctttttc 1577102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 18517936 - 18517884
Alignment:
Q  183 tgagtaaaacacaagaa-ggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  18517936 tgagaaaaacacaagaaaggggggttgaattgtgttagtttttgcttcttttt 18517884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 25398675 - 25398725
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||||||| |||||||||||||| |||||||||| ||||    
T  25398675 tgagaaaaacacaagaagggg-gttgaattgtgttaattttttcttcttttt 25398725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 19037171 - 19037205
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  19037171 tgagaaaaacacaagaaggggggttgaattgtgtt 19037205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 19171242 - 19171208
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  19171242 tgagaaaaacacaagaaggggggttgaattgtgtt 19171208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 23053583 - 23053628
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttc 229  Q
    |||| |||||||||||||||| |||||||||| ||||||||||||||    
T  23053583 tgagaaaaacacaagaagggg-gttgaattgttttagttttttcttc 23053628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 51657320 - 51657286
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  51657320 tgagaaaaacacaagaaggggggttgaattgtgtt 51657286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 5973098 - 5973127
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgtt 217  Q
    ||||||||||||||||||||||||||||||    
T  5973098 aaaacacaagaaggggggttgaattgtgtt 5973127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 12740485 - 12740514
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgtt 217  Q
    ||||||||||||||||||||||||||||||    
T  12740485 aaaacacaagaaggggggttgaattgtgtt 12740514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 21121912 - 21121871
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||| ||||||||| ||||| |||||    
T  21121912 ggggggttgaattgtgttagctttttcttctttttctcctaa 21121871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 21205717 - 21205676
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||| ||||||||| ||||| |||||    
T  21205717 ggggggttgaattgtgttagctttttcttctttttctcctaa 21205676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 21215532 - 21215491
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||| ||||||||| ||||| |||||    
T  21215532 ggggggttgaattgtgttagctttttcttctttttctcctaa 21215491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 21684843 - 21684786
Alignment:
Q  177 tgaatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    ||||| |||| ||||||||| ||| |||||| ||||||||||| ||||||||| ||||    
T  21684843 tgaatgtgagaaaaacacaataagaggggtttaattgtgttagatttttcttcttttt 21684786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 22465690 - 22465625
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||| |||||||||||||||||||||||||   ||||| ||||||| | ||||| ||||||    
T  22465690 tgagaaaaatacaagaaggggggttgaattgtgtttactttttattcgtttactcctaagctgaaa 22465625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 23549523 - 23549580
Alignment:
Q  177 tgaatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| ||||| |||| ||||||| ||  ||||||||||||||||||||||||| ||||    
T  23549523 tgaagatgagaaaaagacaagaaaggaagttgaattgtgttagttttttcttcttttt 23549580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 23917107 - 23917144
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagtttttt 225  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  23917107 aaaacacaagaagggaggttgaattgtgttagcttttt 23917144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 17017784 - 17017816
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtg 215  Q
    |||| ||||||||||||||||||||||||||||    
T  17017784 tgagaaaaacacaagaaggggggttgaattgtg 17017816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 22601047 - 22600999
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||| | ||||||||| ||||| ||||| ||||||    
T  22601047 ggggggttgaattgtgttggctttttcttctttttctcctaacctgaaa 22600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 23861319 - 23861275
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttct 227  Q
    |||| |||||||||||| || |||||||||||||||| |||||||    
T  23861319 tgagaaaaacacaagaacggaggttgaattgtgttagctttttct 23861275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 38281570 - 38281629
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||| |||||||| |||||||| | ||||||||| ||||| ||||| ||||||    
T  38281570 aaaacacaagaa-gggggttggattgtgttggctttttcttccttttctcctaagctgaaa 38281629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 7365 - 7280
Alignment:
Q  76 ttcagattatataatcctaattgtatttacacgctataaaattgagttgaattcgaattattttagcgtttaaataaacatctttg 161  Q
    |||| |||||||||||  ||||  | |||||| |||||||||||||||| |||||||||||||||||| |||||| ||||||||||    
T  7365 ttcaaattatataatctgaatttcacttacaccctataaaattgagttggattcgaattattttagcgattaaatgaacatctttg 7280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 823 - 889
Alignment:
Q  183 tgagtaaaacacaagaaggggggtt-gaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||| |||||||||||  ||||||||||||||| ||||| ||||||    
T  823 tgagaaaaacacaagaaggggggtttgaattgtgttaactttttcttcgttttctcctaagctgaaa 889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 7333 - 7367
Alignment:
Q  21 ggtgtaagtgaaattcagattatataatctgaatt 55  Q
    |||||||||||||||||||||||||||| ||||||    
T  7333 ggtgtaagtgaaattcagattatataatttgaatt 7367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 7367 - 7333
Alignment:
Q  32 aattcagattatataatctgaatttcacttacacc 66  Q
    |||||| ||||||||||||||||||||||||||||    
T  7367 aattcaaattatataatctgaatttcacttacacc 7333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 14311 - 14382
Alignment:
Q  177 tgaatatgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||| |||| |||||| ||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  14311 tgaatttgagaaaaacataagaatgggggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 14382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 18150 - 18083
Alignment:
Q  94 aattgtatttacacgctataaaattgagttgaattcgaattattttagcgtttaaataaacatctttg 161  Q
    ||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||    
T  18150 aattgcatttacaccctataaaattgatttgaattcggattattttagcgtttaaatgaacatatttg 18083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 50486 - 50552
Alignment:
Q  183 tgagtaaaacacaagaaggggg-gttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||||||||||| ||||| ||||||    
T  50486 tgagaaaaacacaagaagggggagttgaattatgttagttttttcttcgttttctcctaagctgaaa 50552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1657 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1657
Description:

Target: scaffold1657; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 1020 - 1077
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||||||||| ||||    
T  1020 tgagcaaaacacaagaaggggggttgaattgtgtttgatttttcttcgttttctccta 1077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 5376 - 5425
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtt 232  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  5376 tgagaaaaacacaagaaggggggttgaattgtgttagctttttcttcgtt 5425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 7872 - 7937
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||| |||||| |||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  7872 tgagaaaaacataagaagaggggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 7937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 13197 - 13254
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| ||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  13197 tgagaaaaacacaaaaaggggggttgaattgtgttagctttttcttcgttttctccta 13254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 2657 - 2715
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  2657 tgagaaaaacacaagaaggggggttgaattgtgttggctttttcttcattttctcctaa 2715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 23830 - 23888
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||| ||||||||||||||| ||||||||||| ||||| |||||    
T  23830 tgagaaaaacacaagaaggagggttgaattgtgttggttttttcttctttttctcctaa 23888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 20372 - 20315
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||| |||||||||| |||||||||||||||||||||||||||||| |||||    
T  20372 tgagaaaaacaaaagaaggggg-ttgaattgtgttagttttttcttcgttttctcctaa 20315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 110482 - 110441
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  110482 ggggggttgaattgtgttggttttttcttcgttttctcctaa 110441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 63538 - 63584
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttc 229  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||    
T  63538 tgagaaaaacacaagaaggggggttgaattgtgtttgttttttcttc 63584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 45877 - 45913
Alignment:
Q  193 acaagaaggggggttgaattgtgttagttttttcttc 229  Q
    |||||||||||||||||||||| || |||||||||||    
T  45877 acaagaaggggggttgaattgtatttgttttttcttc 45913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 211561 - 211627
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||| ||||||    
T  211561 tgagaaaaacacaagaaggggggattgaattgtgttagctttttattcgttttctcctaagctgaaa 211627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 378460 - 378394
Alignment:
Q  183 tgagtaaaacacaagaagg-ggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||  |||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  378460 tgagaaaaacacaagaagaaggggttgaattgtgttagctttttcttcgttttctcctaatctgaaa 378394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 219454 - 219507
Alignment:
Q  195 aagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||| |||||||||||||||||| |||||| ||||||||| ||||| ||||||    
T  219454 aagaaagggggttgaattgtgttactttttttttcgttttctcctaagctgaaa 219507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 7611 - 7558
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||||||||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  7611 aaaacacaagaaggggggttgaattgtgttggctttttcttctttttctcctaa 7558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 860 - 795
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||||||||||||||||||||||  |||||||||  |||| ||||| ||||||    
T  860 tgagaaaaacacaagaaggggggttgaattgtgttaactttttcttctatttctcctaagctgaaa 795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 2905 - 2857
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  2905 ggggggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 2857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 574 - 514
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||||||| ||||||||||||| ||| ||||||||||| ||||| ||||| ||||||    
T  574 aaaacacaagaatgggggttgaattgagttggttttttcttctttttctcctaagctgaaa 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 21843 - 21791
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttc 235  Q
    |||| ||||||||||||||||||||||||||||||   |||||||||||||||    
T  21843 tgagaaaaacacaagaaggggggttgaattgtgttttctttttcttcgttttc 21791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 2873 - 2833
Alignment:
Q  188 aaaacacaagaagggggg-ttgaattgtgttagttttttct 227  Q
    |||||||||||||||||| |||||||||||||| |||||||    
T  2873 aaaacacaagaagggggggttgaattgtgttagctttttct 2833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 9187 - 9234
Alignment:
Q  201 gggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  9187 gggggttgaattgtgttagctttttcttcgttttctcctaagctgaaa 9234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 2405 - 2452
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttc 235  Q
    |||||||||||||||||||||||||||||| | |||||||| ||||||    
T  2405 aaaacacaagaaggggggttgaattgtgtttgctttttctttgttttc 2452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 26558 - 26499
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||    
T  26558 tgagaaaaacacaagaagggggggttgaattgtgttagctttttcttctttttctcctaa 26499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 88507 - 88456
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||||||||||||||||||||||  ||||||||| ||||    
T  88507 tgagaaaaacacaagaaggggggttgaattgtgttaactttttcttcttttt 88456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 87098 - 87149
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgtttt 234  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  87098 tgagaaaaacacaagaaggagggttgaattgtgttagctttttcttcttttt 87149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 523 - 581
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| |||||||||||||||||| |||||||||||| | ||||||||||||||| ||||    
T  523 tgagaaaaacacaagaaggggggattgaattgtgtttgctttttcttcgttttctccta 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 888 - 830
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||| |||||||||||||||||| |||||||||||| | ||||||||||||||| ||||    
T  888 tgagaaaaacacaagaaggggggattgaattgtgtttgctttttcttcgttttctccta 830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 2675 - 2596
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcacactttagaacctgatagagttcagcttct 281  Q
    |||||||||||||||||| | ||||||||||||||| |||  |||||| ||||  || |||| | |||||||||||||||||    
T  2675 ggggggttgaattgtgtttgctttttcttcgttttctcct--actgaagtcactgttcagaagcagatagagttcagcttct 2596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 9116 - 9166
Alignment:
Q  198 aaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||||||||||||||||| || ||||||||||||||| ||||| ||||||    
T  9116 aaggggggttgaattgtgtaagctttttcttcgttttctcctaagctgaaa 9166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 16193 - 16255
Alignment:
Q  188 aaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaaactgaaat 249  Q
    |||||| ||||||||| |||||||||||||||| | ||||||||||||| ||||| |||||||    
T  16193 aaaacaaaagaagggggggttgaattgtgttagctatttcttcgttttctcctaagctgaaat 16255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 102757 - 102823
Alignment:
Q  183 tgagtaaaacacaagaaggggg-gttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||||| |||||||||| |||  ||||||||||||||| ||||| ||||||    
T  102757 tgagaaaaacacaagaagggggtgttgaattgtattaactttttcttcgttttctcctaagctgaaa 102823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 250851 - 250897
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttc 229  Q
    |||| ||||||||||||| | ||||||||||||||||||||||||||    
T  250851 tgagaaaaacacaagaagagaggttgaattgtgttagttttttcttc 250897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 19563 - 19510
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttcttcgttttc 235  Q
    |||| |||||||||||||||||| |||||||||||| | |||||||||||||||    
T  19563 tgagaaaaacacaagaagggggggttgaattgtgttggctttttcttcgttttc 19510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 2172 - 2236
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaa 247  Q
    |||| ||||||||||||| ||||||||||||||||   ||||||||| ||||| ||||| |||||    
T  2172 tgagaaaaacacaagaagtggggttgaattgtgttttctttttcttctttttctcctaagctgaa 2236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 3095 - 3051
Alignment:
Q  173 aacatgaatatgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    ||||||||  |||| ||||||||||||||||||||||||||||||    
T  3095 aacatgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 3051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 30977 - 31029
Alignment:
Q  183 tgagtaaaacacaagaa-ggggggttgaattgtgttagttttttcttcgtttt 234  Q
    ||||||||||||||||| |||||||||||||||||||| || |||||| ||||    
T  30977 tgagtaaaacacaagaagggggggttgaattgtgttagattgttcttcttttt 31029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 2959 - 2919
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  2959 ggggggttgaattgtgttagctttttcttcgttttctccta 2919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 80572 - 80623
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||| ||||    
T  80572 aaaacacaagaaggggg-ttaaattgtgttagctttttcttcgttttctccta 80623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 13976 - 14005
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgtt 217  Q
    ||||||||||||||||||||||||||||||    
T  13976 aaaacacaagaaggggggttgaattgtgtt 14005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 19326 - 19361
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtta 218  Q
    |||| |||||||||||||||||||||||||||||||    
T  19326 tgagaaaaacacaagaaggggggttgaattgtgtta 19361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 620 - 654
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  620 tgagaaaaacacaagaaggggggttgaattgtgtt 654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 1729 - 1683
Alignment:
Q  183 tgagtaaaacacaagaagggggg-ttgaattgtgttagttttttctt 228  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||||    
T  1729 tgagaaaaacacaagaagggggggttgaattgtgttaggtttttctt 1683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 7222 - 7188
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  7222 tgagaaaaacacaagaaggggggttgaattgtgtt 7188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 18666 - 18608
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaa 241  Q
    |||| |||||||||||||| |||||||||| |||| |||||| |||| ||||| |||||    
T  18666 tgagaaaaacacaagaaggagggttgaattatgtttgtttttgcttctttttctcctaa 18608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 25630 - 25696
Alignment:
Q  183 tgagtaaaacacaagaagggg-ggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||| |||||||||||| ||||||||||||||   ||||||||||||||| ||||| ||||||    
T  25630 tgagaaaagcacaagaagggggggttgaattgtgtttactttttcttcgttttctcctaagctgaaa 25696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 11471 - 11437
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  11471 tgagaaaaacacaagaaggggggttgaattgtgtt 11437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 33767 - 33733
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  33767 tgagaaaaacacaagaaggggggttgaattgtgtt 33733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 52600 - 52566
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  52600 tgagaaaaacacaagaaggggggttgaattgtgtt 52566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 476199 - 476165
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  476199 tgagaaaaacacaagaaggggggttgaattgtgtt 476165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 482719 - 482685
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgtt 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  482719 tgagaaaaacacaagaaggggggttgaattgtgtt 482685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 18246 - 18303
Alignment:
Q  191 acacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||||||| ||||||||||||||||||   ||||||||| ||||| ||||| ||||||    
T  18246 acacaagagggggggttgaattgtgttttctttttcttctttttctcctaagctgaaa 18303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 7082 - 7147
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| ||||||||||||||||||||||| | |||||  ||||||||  ||||| ||||| ||||||    
T  7082 tgagaaaaacacaagaaggggggttgaactctgttaactttttcttatttttctcctaagctgaaa 7147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 73739 - 73801
Alignment:
Q  188 aaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaatcac 252  Q
    ||||||||||||||||| ||||||| ||||   ||||||||||||||| |||  |||||||||||    
T  73739 aaaacacaagaagggggattgaattttgtttactttttcttcgttttctcct--actgaaatcac 73801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 83500 - 83564
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    |||| |||||||||||| | || |||||||||||||| ||||||||| ||||| ||||| ||||||    
T  83500 tgagaaaaacacaagaatgagg-ttgaattgtgttagctttttcttctttttctcctaagctgaaa 83564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 1869 - 1901
Alignment:
Q  183 tgagtaaaacacaagaaggggggttgaattgtg 215  Q
    |||| ||||||||||||||||||||||||||||    
T  1869 tgagaaaaacacaagaaggggggttgaattgtg 1901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 1094 - 1058
Alignment:
Q  204 ggttgaattgtgttagttttttcttcgttttcaccta 240  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  1094 ggttgaattgtgttagctttttcttcgttttctccta 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 10999 - 10951
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||||||  |||||||||| ||||||||||||||| ||||| ||||||    
T  10999 ggggggttatattgtgttagctttttcttcgttttctcctaagctgaaa 10951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 15663 - 15615
Alignment:
Q  200 ggggggttgaattgtgttagttttttcttcgttttcacctaaactgaaa 248  Q
    ||||||||  |||||||||| ||||||||||||||| ||||| ||||||    
T  15663 ggggggttatattgtgttagctttttcttcgttttctcctaagctgaaa 15615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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