View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0889_low_14 (Length: 278)

Name: NF0889_low_14
Description: NF0889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0889_low_14
NF0889_low_14
[»] chr4 (49 HSPs)
chr4 (3-140)||(50374233-50374370)
chr4 (134-268)||(6923070-6923204)
chr4 (134-268)||(25644356-25644490)
chr4 (137-267)||(50033020-50033150)
chr4 (136-268)||(19525844-19525976)
chr4 (137-267)||(50035539-50035669)
chr4 (159-268)||(42187109-42187218)
chr4 (165-268)||(19170669-19170772)
chr4 (137-268)||(19631308-19631439)
chr4 (137-268)||(19731296-19731426)
chr4 (137-268)||(28166274-28166405)
chr4 (137-268)||(45198470-45198601)
chr4 (159-268)||(5123287-5123396)
chr4 (160-268)||(3443517-3443625)
chr4 (156-268)||(7738949-7739061)
chr4 (136-268)||(23255934-23256066)
chr4 (136-268)||(53568353-53568485)
chr4 (137-268)||(3901269-3901400)
chr4 (137-268)||(5735271-5735402)
chr4 (137-268)||(26205834-26205965)
chr4 (136-268)||(26659839-26659970)
chr4 (137-268)||(46212480-46212611)
chr4 (133-223)||(4209359-4209449)
chr4 (137-223)||(19634023-19634109)
chr4 (156-268)||(37688163-37688275)
chr4 (159-268)||(39260262-39260370)
chr4 (135-268)||(39786487-39786619)
chr4 (164-268)||(55997141-55997245)
chr4 (137-268)||(3442474-3442605)
chr4 (133-220)||(4264130-4264217)
chr4 (165-268)||(18360103-18360206)
chr4 (165-268)||(36602722-36602825)
chr4 (137-223)||(46803631-46803717)
chr4 (139-268)||(49768447-49768576)
chr4 (156-268)||(1377051-1377163)
chr4 (159-223)||(19652430-19652494)
chr4 (156-268)||(28152010-28152122)
chr4 (176-268)||(50971499-50971590)
chr4 (165-268)||(55014290-55014393)
chr4 (165-268)||(55190844-55190947)
chr4 (165-267)||(23603778-23603880)
chr4 (142-268)||(39193917-39194043)
chr4 (137-223)||(47579287-47579373)
chr4 (137-221)||(51737130-51737214)
chr4 (137-268)||(5744213-5744344)
chr4 (156-223)||(20678762-20678829)
chr4 (165-268)||(21859049-21859152)
chr4 (165-268)||(21914912-21915015)
chr4 (146-207)||(14958017-14958078)
[»] chr3 (40 HSPs)
chr3 (134-268)||(17052861-17052995)
chr3 (134-268)||(4238750-4238884)
chr3 (134-268)||(32951266-32951400)
chr3 (134-268)||(10435131-10435265)
chr3 (144-268)||(35717985-35718109)
chr3 (156-268)||(49057875-49057987)
chr3 (137-268)||(3547551-3547681)
chr3 (137-223)||(45093720-45093806)
chr3 (137-268)||(28690516-28690647)
chr3 (151-268)||(9145516-9145633)
chr3 (159-268)||(25097317-25097426)
chr3 (135-268)||(27848950-27849082)
chr3 (137-268)||(7671443-7671574)
chr3 (137-268)||(18659052-18659183)
chr3 (133-220)||(21906992-21907079)
chr3 (137-268)||(43137851-43137982)
chr3 (135-268)||(29728228-29728361)
chr3 (156-268)||(7459950-7460062)
chr3 (136-268)||(37832899-37833031)
chr3 (165-268)||(32285306-32285409)
chr3 (137-268)||(36665019-36665149)
chr3 (165-223)||(34827350-34827408)
chr3 (165-268)||(38492080-38492182)
chr3 (165-223)||(46483579-46483637)
chr3 (159-268)||(10437304-10437413)
chr3 (179-268)||(47638097-47638186)
chr3 (156-268)||(8559135-8559247)
chr3 (156-268)||(10571274-10571386)
chr3 (156-223)||(45167318-45167385)
chr3 (136-223)||(48707018-48707105)
chr3 (137-223)||(1327311-1327397)
chr3 (137-223)||(5505057-5505142)
chr3 (165-223)||(38833692-38833750)
chr3 (165-223)||(51062418-51062476)
chr3 (137-227)||(52668656-52668746)
chr3 (156-222)||(54840304-54840370)
chr3 (156-256)||(51392434-51392534)
chr3 (165-220)||(53066402-53066457)
chr3 (146-212)||(48143774-48143840)
chr3 (168-223)||(15503056-15503111)
[»] chr1 (37 HSPs)
chr1 (134-268)||(16265030-16265164)
chr1 (134-268)||(24982348-24982482)
chr1 (134-268)||(16266159-16266293)
chr1 (134-268)||(26441634-26441768)
chr1 (134-268)||(3898701-3898835)
chr1 (131-268)||(23569804-23569941)
chr1 (134-223)||(43680066-43680155)
chr1 (137-268)||(16751583-16751714)
chr1 (137-269)||(50481278-50481408)
chr1 (137-268)||(38738108-38738239)
chr1 (137-264)||(3529176-3529303)
chr1 (137-222)||(47222214-47222299)
chr1 (136-268)||(25531777-25531909)
chr1 (159-222)||(4605020-4605083)
chr1 (137-268)||(50539260-50539391)
chr1 (142-268)||(45234975-45235101)
chr1 (159-268)||(32565768-32565877)
chr1 (136-268)||(32988479-32988611)
chr1 (132-268)||(48219772-48219908)
chr1 (140-268)||(14075738-14075865)
chr1 (137-223)||(52378989-52379075)
chr1 (159-268)||(31971517-31971626)
chr1 (135-268)||(48264941-48265074)
chr1 (143-223)||(21034705-21034785)
chr1 (156-268)||(39354394-39354506)
chr1 (165-225)||(48376186-48376246)
chr1 (137-268)||(30529180-30529311)
chr1 (156-223)||(42708523-42708590)
chr1 (156-268)||(29161861-29161974)
chr1 (133-222)||(49805428-49805517)
chr1 (135-268)||(50876362-50876495)
chr1 (176-223)||(38458768-38458815)
chr1 (159-220)||(31698766-31698827)
chr1 (178-223)||(41501783-41501828)
chr1 (184-222)||(1849746-1849784)
chr1 (236-268)||(23340889-23340921)
chr1 (236-268)||(37515436-37515468)
[»] chr5 (36 HSPs)
chr5 (134-268)||(970135-970269)
chr5 (134-223)||(4300007-4300096)
chr5 (134-268)||(43067226-43067360)
chr5 (134-268)||(39405761-39405895)
chr5 (134-223)||(16048080-16048169)
chr5 (134-268)||(22613839-22613973)
chr5 (137-268)||(41411287-41411419)
chr5 (165-268)||(35290314-35290417)
chr5 (137-268)||(19889654-19889784)
chr5 (136-268)||(1830653-1830786)
chr5 (135-223)||(15268108-15268196)
chr5 (137-268)||(40316121-40316253)
chr5 (136-268)||(42148306-42148438)
chr5 (137-268)||(39036410-39036541)
chr5 (137-223)||(42421685-42421771)
chr5 (176-268)||(4924968-4925060)
chr5 (165-268)||(5213052-5213155)
chr5 (136-223)||(37516143-37516230)
chr5 (165-268)||(37843705-37843808)
chr5 (152-268)||(25563515-25563631)
chr5 (137-268)||(29627268-29627399)
chr5 (134-225)||(32334813-32334904)
chr5 (137-268)||(38697963-38698094)
chr5 (137-268)||(39894781-39894912)
chr5 (165-268)||(40512810-40512913)
chr5 (165-223)||(14475409-14475467)
chr5 (165-268)||(19868816-19868918)
chr5 (165-268)||(30779876-30779978)
chr5 (137-223)||(35448172-35448258)
chr5 (136-220)||(23988578-23988662)
chr5 (156-268)||(32002144-32002256)
chr5 (165-268)||(5364448-5364551)
chr5 (165-268)||(43517190-43517293)
chr5 (152-222)||(19087946-19088016)
chr5 (136-220)||(32300569-32300653)
chr5 (236-268)||(14475360-14475392)
[»] chr8 (34 HSPs)
chr8 (134-268)||(31127935-31128069)
chr8 (134-223)||(11854521-11854610)
chr8 (134-268)||(18809273-18809407)
chr8 (137-267)||(44123673-44123803)
chr8 (137-268)||(12893531-12893662)
chr8 (136-268)||(1580895-1581027)
chr8 (156-268)||(13138262-13138374)
chr8 (136-268)||(29790941-29791073)
chr8 (137-268)||(8351010-8351141)
chr8 (137-268)||(40013651-40013782)
chr8 (167-223)||(886242-886298)
chr8 (165-268)||(6470873-6470976)
chr8 (159-268)||(14522402-14522511)
chr8 (137-268)||(45253749-45253880)
chr8 (135-262)||(45081810-45081937)
chr8 (137-223)||(3293277-3293363)
chr8 (145-267)||(10657986-10658107)
chr8 (137-223)||(38845200-38845286)
chr8 (165-222)||(14847238-14847295)
chr8 (137-262)||(30289924-30290049)
chr8 (147-223)||(25256344-25256420)
chr8 (137-268)||(2805606-2805737)
chr8 (137-268)||(30380530-30380661)
chr8 (156-268)||(43066146-43066257)
chr8 (134-268)||(38739654-38739788)
chr8 (188-268)||(9302483-9302563)
chr8 (156-223)||(23764626-23764694)
chr8 (176-268)||(39361164-39361256)
chr8 (137-268)||(37709899-37710030)
chr8 (137-223)||(2986339-2986424)
chr8 (151-220)||(20671594-20671662)
chr8 (142-222)||(3383415-3383495)
chr8 (236-268)||(20167707-20167739)
chr8 (236-268)||(23764579-23764611)
[»] chr7 (35 HSPs)
chr7 (134-268)||(10464245-10464379)
chr7 (134-268)||(35500877-35501011)
chr7 (134-223)||(37231739-37231828)
chr7 (137-268)||(34478141-34478272)
chr7 (134-264)||(36643159-36643289)
chr7 (159-268)||(21392040-21392149)
chr7 (159-268)||(48531344-48531453)
chr7 (135-268)||(36905524-36905657)
chr7 (140-268)||(29770604-29770732)
chr7 (133-268)||(19072765-19072900)
chr7 (165-268)||(23474099-23474202)
chr7 (137-268)||(28185538-28185669)
chr7 (165-268)||(31466488-31466591)
chr7 (137-268)||(36819696-36819827)
chr7 (175-268)||(18795270-18795363)
chr7 (156-268)||(42086768-42086880)
chr7 (136-268)||(47080979-47081111)
chr7 (136-268)||(31497834-31497965)
chr7 (137-268)||(32619072-32619203)
chr7 (137-268)||(42834422-42834553)
chr7 (181-268)||(47537967-47538054)
chr7 (156-268)||(37951075-37951187)
chr7 (137-268)||(2400285-2400416)
chr7 (177-268)||(36859338-36859429)
chr7 (165-223)||(44479895-44479953)
chr7 (133-222)||(42493806-42493895)
chr7 (165-262)||(47713638-47713735)
chr7 (166-222)||(4612263-4612319)
chr7 (137-223)||(2450689-2450775)
chr7 (137-220)||(40348410-40348493)
chr7 (236-268)||(33613315-33613347)
chr7 (236-268)||(41796755-41796787)
chr7 (236-268)||(42493647-42493679)
chr7 (236-268)||(44389416-44389448)
chr7 (236-268)||(46657732-46657764)
[»] chr2 (37 HSPs)
chr2 (134-223)||(40598125-40598214)
chr2 (137-268)||(30708728-30708859)
chr2 (138-264)||(41463651-41463777)
chr2 (159-268)||(39418150-39418259)
chr2 (135-267)||(38137662-38137793)
chr2 (137-268)||(32776030-32776161)
chr2 (137-268)||(4045363-4045494)
chr2 (165-268)||(7443021-7443124)
chr2 (165-268)||(38963547-38963650)
chr2 (137-268)||(3987362-3987493)
chr2 (137-268)||(23671376-23671507)
chr2 (136-268)||(332277-332408)
chr2 (136-266)||(42951339-42951469)
chr2 (159-268)||(4045872-4045981)
chr2 (143-268)||(40898646-40898769)
chr2 (156-268)||(16941941-16942053)
chr2 (156-268)||(17012606-17012718)
chr2 (176-264)||(44283413-44283501)
chr2 (137-268)||(18718239-18718370)
chr2 (165-268)||(42038551-42038654)
chr2 (137-223)||(14372077-14372163)
chr2 (137-223)||(20517419-20517505)
chr2 (156-268)||(14707664-14707776)
chr2 (156-268)||(36199081-36199193)
chr2 (156-268)||(44330403-44330515)
chr2 (165-268)||(9877213-9877316)
chr2 (137-268)||(27559575-27559706)
chr2 (137-268)||(41172887-41173018)
chr2 (186-268)||(30776323-30776405)
chr2 (137-223)||(34826912-34826998)
chr2 (156-218)||(38588069-38588131)
chr2 (137-223)||(40425424-40425510)
chr2 (165-222)||(4083235-4083292)
chr2 (175-223)||(24283133-24283181)
chr2 (165-207)||(5030462-5030504)
chr2 (174-223)||(43925256-43925305)
chr2 (236-268)||(5030411-5030443)
[»] chr6 (18 HSPs)
chr6 (137-268)||(33121542-33121673)
chr6 (134-268)||(25163161-25163295)
chr6 (132-268)||(13207083-13207219)
chr6 (137-268)||(643561-643692)
chr6 (156-268)||(24150760-24150872)
chr6 (156-268)||(25435431-25435542)
chr6 (133-268)||(7098003-7098134)
chr6 (165-268)||(29986288-29986391)
chr6 (133-223)||(8796046-8796136)
chr6 (135-268)||(11114563-11114696)
chr6 (135-220)||(16434706-16434791)
chr6 (134-223)||(29403641-29403730)
chr6 (156-268)||(22020295-22020407)
chr6 (165-268)||(18991932-18992034)
chr6 (137-215)||(19068951-19069029)
chr6 (135-268)||(31854816-31854949)
chr6 (151-264)||(17417538-17417651)
chr6 (165-268)||(30237193-30237298)
[»] scaffold0111 (1 HSPs)
scaffold0111 (152-268)||(38490-38606)
[»] scaffold0051 (1 HSPs)
scaffold0051 (135-268)||(41347-41480)
[»] scaffold0459 (1 HSPs)
scaffold0459 (133-268)||(12748-12883)
[»] scaffold0366 (2 HSPs)
scaffold0366 (133-268)||(10389-10524)
scaffold0366 (133-268)||(14055-14190)
[»] scaffold0092 (1 HSPs)
scaffold0092 (137-268)||(44238-44369)
[»] scaffold0027 (1 HSPs)
scaffold0027 (136-220)||(117320-117404)
[»] scaffold0018 (1 HSPs)
scaffold0018 (135-201)||(145756-145822)


Alignment Details
Target: chr4 (Bit Score: 134; Significance: 8e-70; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 50374233 - 50374370
Alignment:
Q  3 aaagaataaatttgcagagtggtcagtgataggagcaagagtttgaaatagacaagtcattgaaagtctaaggtgaattattcaggcgcgtttgggctgt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50374233 aaagaataaatttgcagagtggtcagtgataggagcaagagtttgaaatagacaagtcattgaaagtctaaggtgaattattcaggcgcgtttgggctgt 50374332  T
Q  103 gtctgaaaaactaaagttgctgcggtttacttattact 140  Q
    |||| |||||||||||||||||||||||||||||||||    
T  50374333 gtctaaaaaactaaagttgctgcggtttacttattact 50374370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 268
Target Start/End: Complemental strand, 6923204 - 6923070
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |            
T  6923204 tattactccctccgtcttatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctataaaaaaa 6923105  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      | ||||||||||||||||||| |||||||||||    
T  6923104 aataatgaaaatttaatattttaaaaatattcatc 6923070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 25644356 - 25644490
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    |||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |          
T  25644356 tattactccctctgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 25644455  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||||||| ||||||| |||||||||||    
T  25644456 aattatgaaaatttactattttaaaaatattcatc 25644490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 50033020 - 50033150
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||| ||||||| ||||||| |||| |||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  50033020 tactctctccgtcccatattagatgacttagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 50033119  T
Q  237 tatgaaaatttaatattttagaaatattcat 267  Q
    |||||||||||||||||||| ||||||||||    
T  50033120 tatgaaaatttaatattttaaaaatattcat 50033150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 136 - 268
Target Start/End: Complemental strand, 19525976 - 19525844
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnn 235  Q
    ||||||||||||||  |||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||  |||            
T  19525976 ttactccctccgtcctatattaaatgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctttactaaaaaaaa 19525877  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||| ||||||||||| |||||||||||    
T  19525876 ttatgaaaacttaatattttaaaaatattcatc 19525844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 50035539 - 50035669
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||| ||||||| ||||||| ||||| ||||||||| ||||||||||| |||||||||| |||||||||||| ||||| ||||||| |||        |    
T  50035539 tactctctccgtcccatattagatgatctagttgactccgacacacgtatcaatgcatatgttttatctttgaaatcttcaattctctactaaaaaaaat 50035638  T
Q  237 tatgaaaatttaatattttagaaatattcat 267  Q
    |||||||||||||||||||| ||||||||||    
T  50035639 tatgaaaatttaatattttaaaaatattcat 50035669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 159 - 268
Target Start/End: Complemental strand, 42187218 - 42187109
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttaga 258  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||| |||        |||| |||||||||||||||| |    
T  42187218 atgatttagttgactctgacatacgtaccaatgcatatattttatctttgatatctttaattctctactaaaaaaaattataaaaatttaatattttaaa 42187119  T
Q  259 aatattcatc 268  Q
    ||||||||||    
T  42187118 aatattcatc 42187109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 19170772 - 19170669
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||         ||||||||||||||||||||| |||||||    
T  19170772 tagttgacttcgacacatgtaccaatgcatatattttatctttaatatcttcaattctctaccaaaaaaaattatgaaaatttaatattttaaaaatatt 19170673  T
Q  265 catc 268  Q
    ||||    
T  19170672 catc 19170669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 19631308 - 19631439
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||| |||||||  |||||| |||| ||| |||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| | |        |    
T  19631308 tactctctccgtcctatattagatgacttaattgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaat 19631407  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    |||||||||||||||||||  |||||||||||    
T  19631408 tatgaaaatttaatatttttaaaatattcatc 19631439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 19731426 - 19731296
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    |||||||| |||  ||||||| ||||  ||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| ||| |||        |    
T  19731426 tactcccttcgttccatattagatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaatgctctact-aaaacaat 19731328  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    |||||||||||||||||||| |||||||||||    
T  19731327 tatgaaaatttaatattttaaaaatattcatc 19731296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 28166274 - 28166405
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  28166274 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 28166373  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  28166374 tataaaaatttaatattttaaaaatactcatc 28166405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 45198601 - 45198470
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  45198601 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 45198502  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  45198501 tataaaaatttaatattttaaaaatactcatc 45198470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 268
Target Start/End: Complemental strand, 5123396 - 5123287
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttaga 258  Q
    |||| ||||||||||  ||||||||||||||||||||| |||||||||||||||||| |||| || |||        |||| |||||||||||||||| |    
T  5123396 atgacttagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattatctactaaaaaaaattataaaaatttaatattttaaa 5123297  T
Q  259 aatattcatc 268  Q
    ||||||||||    
T  5123296 aatattcatc 5123287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 268
Target Start/End: Complemental strand, 3443625 - 3443517
Alignment:
Q  160 tgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaa 259  Q
    ||||||| ||||||  ||||||||||| ||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||| ||    
T  3443625 tgatttaattgactctgacacacgtacaaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaa 3443526  T
Q  260 atattcatc 268  Q
    |||||||||    
T  3443525 atattcatc 3443517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 7739061 - 7738949
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  ||||||||| ||||||||||| |||||||||| ||||||||||||||| || ||||||| |||        |||| |||||||||||||||    
T  7739061 taaatgacctagttgactccgacacacgtatcaatgcatatgttttatctttgatatattcaattctctactaaaaaaaattataaaaatttaatatttt 7738962  T
Q  256 agaaatattcatc 268  Q
    | |||||||||||    
T  7738961 aaaaatattcatc 7738949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 268
Target Start/End: Original strand, 23255934 - 23256066
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnn 235  Q
    |||||||||||||| |  | || ||||  |||||||||  |||||||||||||||||||||||||||| ||||||||||| ||||||| |||            
T  23255934 ttactccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatattttatatttgatatcttcaattctctactaaaataaa 23256033  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    |||| |||||| ||||||||| |||||||||||    
T  23256034 ttataaaaattcaatattttaaaaatattcatc 23256066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 268
Target Start/End: Original strand, 53568353 - 53568485
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnn 235  Q
    ||||| |||||||| ||||| |||||   ||||||||| |||||||| || |||||||||| |||||||||||||||||| ||||||  |||            
T  53568353 ttacttcctccgtcccatatcaaatgtcctagttgactccgacacacatatcaatgcatatgttttatctttgatatcttcaattctttactaaaaaatt 53568452  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||| | |||||||||||    
T  53568453 ttatgaaaatttaatatttaaaaaatattcatc 53568485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 3901400 - 3901269
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  3901400 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 3901301  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  3901300 tataaaaatttaatattttaaaaatactcatc 3901269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 5735271 - 5735402
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| | |        |    
T  5735271 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaat 5735370  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  5735371 tataaaaatttaatattttaaaaatactcatc 5735402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 26205965 - 26205834
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||| |||||||||   |||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  26205965 tactccctccgtccctaaataaatgatctagttgactcttacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 26205866  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  26205865 tataaaaatttaatattttaaaaatactcatc 26205834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 268
Target Start/End: Original strand, 26659839 - 26659970
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnn 235  Q
    ||||||||| |||||||||||| ||||  ||||||||| ||||||| ||| || ||||||| ||||| |||||||||||| ||||||| | |            
T  26659839 ttactccctgcgtctcatattatatgacctagttgactccgacacatgtatcactgcatatgttttagctttgatatcttcaattctctaat-aaaaaaa 26659937  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  26659938 ttatgaaaatttaatattttaaaaatattcatc 26659970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 46212611 - 46212480
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  46212611 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 46212512  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  46212511 tataaaaatttaatattttaaaaatactcatc 46212480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 4209359 - 4209449
Alignment:
Q  133 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||||||| |  | || ||||| |||||||||  ||||||||||||||| ||||| |||||||||||||||||| |||||||    
T  4209359 ttattactccctccgtccctcaatagatgatctagttgactctgacacacgtaccaatacatatgttttatctttgatatcttcaattctc 4209449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 19634109 - 19634023
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||| |||| | || || ||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||||| |||||||    
T  19634109 tactcccttcgtcccttaatagatgatctagttgactccgacacacgtaccaattcatatgttttatctttgatatcttcaattctc 19634023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 37688275 - 37688163
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||| ||| |||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||    
T  37688275 taaatgatctagatgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 37688176  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  37688175 aaaaatactcatc 37688163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 268
Target Start/End: Complemental strand, 39260370 - 39260262
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttaga 258  Q
    ||||| |||||||||  |||||| |||||||| |||||||||||||||||||||||| ||||||| |||        |||| |||||||||||||||| |    
T  39260370 atgatctagttgactctgacacatgtaccaatacatatattttatctttgatatcttcaattctctact-aaaaaaattataaaaatttaatattttaaa 39260272  T
Q  259 aatattcatc 268  Q
    ||||||||||    
T  39260271 aatattcatc 39260262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 268
Target Start/End: Complemental strand, 39786619 - 39786487
Alignment:
Q  135 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnn 234  Q
    ||||||||||||||| |  | || ||||  |||||||||  |||||||||| |||||||||| |||||||||||||||||| ||||||| |||           
T  39786619 attactccctccgtccctcaatagatgacctagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctact-aaaaaa 39786521  T
Q  235 nttatgaaaatttaatattttagaaatattcatc 268  Q
     |||| |||||||||||||||| |||||||||||    
T  39786520 attataaaaatttaatattttaaaaatattcatc 39786487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 55997141 - 55997245
Alignment:
Q  164 ttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatat 263  Q
    |||| ||||| |||||||||||||||||||||  |||||||||||||||||| ||||||| | |        |||||||||||| |||||||| ||||||    
T  55997141 ttagatgactccgacacacgtaccaatgcatacgttttatctttgatatcttcaattctctattaaaaaaaattatgaaaattttatattttaaaaatat 55997240  T
Q  264 tcatc 268  Q
    |||||    
T  55997241 tcatc 55997245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 3442605 - 3442474
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  3442605 tactccctccgtccctaaataaatgacatagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 3442506  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| ||| |||||||||||| ||||| |||||    
T  3442505 tataaaattttaatattttaaaaatactcatc 3442474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 4264130 - 4264217
Alignment:
Q  133 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaatt 220  Q
    ||||||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||    
T  4264130 ttattactccctccgtccctcaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaatt 4264217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 18360206 - 18360103
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||| ||||||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||| ||||||||| |||||||    
T  18360206 tagttgactctgacgcacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaattcaatattttaaaaatatt 18360107  T
Q  265 catc 268  Q
    ||||    
T  18360106 catc 18360103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 36602722 - 36602825
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||| ||||||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||| ||||||||| |||||||    
T  36602722 tagttgactctgacgcacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaattcaatattttaaaaatatt 36602821  T
Q  265 catc 268  Q
    ||||    
T  36602822 catc 36602825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 46803631 - 46803717
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  46803631 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctc 46803717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 49768447 - 49768576
Alignment:
Q  139 ctccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnntta 238  Q
    ||||||||||| |  | ||||||| ||||||||||  |||| || || |||||||||| |||||||||||||||||| ||||||| |||        |||    
T  49768447 ctccctccgtccctaaataaatgacttagttgactatgacatacatatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaatta 49768546  T
Q  239 tgaaaatttaatattttagaaatattcatc 268  Q
    | |||||||||||||||| ||||| |||||    
T  49768547 taaaaatttaatattttaaaaatactcatc 49768576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 1377051 - 1377163
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |||| ||||||| |||||||    
T  1377051 taaatgacgtagttgactatgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaattttatatttt 1377150  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  1377151 aaaaatactcatc 1377163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 19652494 - 19652430
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||| ||||||||| ||||| |||||||||| ||||| |||||||||||||||||| |||||||    
T  19652494 atgatctagttgactccgacatacgtaccaattcatatgttttatctttgatatcttcaattctc 19652430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 28152010 - 28152122
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||  ||||||| ||||||||||||| |||||| ||||||||||| ||||||| |||        |||| |||||||||||||||    
T  28152010 taaatgacctagttgactctgacacacataccaatgcatatgttttatatttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 28152109  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  28152110 aaaaatactcatc 28152122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 268
Target Start/End: Original strand, 50971499 - 50971590
Alignment:
Q  176 gacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||| |||        |||| |||||||||||||||| |||||||||||    
T  50971499 gacacacgtaccaatgcatatgttttat-tttgatatatttaattctctactaaaaaatattataaaaatttaatattttaaaaatattcatc 50971590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 55014290 - 55014393
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    ||||||||| |||||||||||| ||||||||| ||||||||||||||| || |||| |  | |        ||||||||||||||||||||| |||||||    
T  55014290 tagttgactccgacacacgtactaatgcatatgttttatctttgatatattcaattgtgtattaagaaaaattatgaaaatttaatattttaaaaatatt 55014389  T
Q  265 catc 268  Q
    ||||    
T  55014390 catc 55014393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 55190947 - 55190844
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||| || | |        |||| |||||||||||||||| |||||||    
T  55190947 tagttgactctgacacacttaccaatgcatatgttttatctttgatatcttcaattatctattaaaaaaaattataaaaatttaatattttaaaaatatt 55190848  T
Q  265 catc 268  Q
    ||||    
T  55190847 catc 55190844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 23603880 - 23603778
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||||||||||||||| | |||||||||||||||||| |||| |  ||         ||||||||||||||||||||| |||||||    
T  23603880 tagttgactctgacacacgtaccaatgcatctgttttatctttgatatcttcaattttttacgaaaaaaaattatgaaaatttaatattttaaaaatatt 23603781  T
Q  265 cat 267  Q
    |||    
T  23603780 cat 23603778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 268
Target Start/End: Original strand, 39193917 - 39194043
Alignment:
Q  142 cctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatga 241  Q
    ||||||||||||||||  ||||  ||||||||  ||||||  || |||||||||| |||||||||| |||||||| |||||| | |        ||||||    
T  39193917 cctccgtctcatattacttgatacagttgactctgacacatatatcaatgcatatcttttatctttaatatctttcattctctattaaaaacaattatga 39194016  T
Q  242 aaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||| ||||| |||||    
T  39194017 aaatttaatattttaaaaatactcatc 39194043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 47579287 - 47579373
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||| |  | |||||||  |||||||||   |||||| ||||||||||||| |||||||||||||||||| |||||||    
T  47579287 tactccctccgtccctaaataaatgacctagttgactcttacacacataccaatgcatatgttttatctttgatatcttcaattctc 47579373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 51737214 - 51737130
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattc 221  Q
    ||||| ||||||| ||||||| || |  | ||||||| |||||||||||||||||||||| |||||||||| |||| || |||||    
T  51737214 tactctctccgtcccatattagataaccttgttgactccgacacacgtaccaatgcatatgttttatcttttatattttcaattc 51737130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 5744344 - 5744213
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| || ||||| |||| |||||||||||||||||| ||||||| | |        |    
T  5744344 tactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgtatatgttttatctttgatatcttcaattctctattaaaaaaaat 5744245  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  5744244 tataaaaatttaatattttaaaaatactcatc 5744213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 20678829 - 20678762
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||| |||||||||  ||||||  || |||||||||||||||||||||||||| || |||||||    
T  20678829 taaatgatctagttgactctgacacatatatcaatgcatatattttatctttgatattttcaattctc 20678762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 21859152 - 21859049
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||| ||||||| ||||| ||||||||||||||| || ||||||| |||        |||| |||||||||||||||| ||||| |    
T  21859152 tagttgactctgacacacataccaatacatatgttttatctttgatattttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatact 21859053  T
Q  265 catc 268  Q
    ||||    
T  21859052 catc 21859049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 21915015 - 21914912
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||| ||||||| ||||| ||||||||||||||| || ||||||| |||        |||| |||||||||||||||| ||||| |    
T  21915015 tagttgactctgacacacataccaatacatatgttttatctttgatattttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatact 21914916  T
Q  265 catc 268  Q
    ||||    
T  21914915 catc 21914912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 14958017 - 14958078
Alignment:
Q  146 cgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatcttt 207  Q
    |||||||||||| ||||  |||||||||  ||||||| ||||||||||||| || |||||||    
T  14958017 cgtctcatattagatgacctagttgactctgacacacataccaatgcatattttatatcttt 14958078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 17052861 - 17052995
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| || | |          
T  17052861 tattactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattttctattaaaaaa 17052960  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||||||||||||||| |||||||||||    
T  17052961 aattatgaaaatttaatattttaaaaatattcatc 17052995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 134 - 268
Target Start/End: Complemental strand, 4238884 - 4238750
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| | |          
T  4238884 tattactccctccgttccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctattaaaaaa 4238785  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  4238784 aattatgaaaacttaatattttaaaaatattcatc 4238750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 134 - 268
Target Start/End: Complemental strand, 32951400 - 32951266
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||| |||||| ||||||| | |          
T  32951400 tattactccctccgtcccatattaaatgatctagttgacttcgacacacataccaatgcatatgttttatctttggtatcttcaattctctattaaaaaa 32951301  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  32951300 aattatgaaaacttaatattttaaaaatattcatc 32951266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 10435131 - 10435265
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    ||||||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| | |          
T  10435131 tattactctatccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctattaaaaaa 10435230  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  10435231 aattatgaaaacttaatattttaaaaatattcatc 10435265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 35718109 - 35717985
Alignment:
Q  144 tccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaa 243  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||||||| ||||||| |||||||||| |||| || |||        ||||||||    
T  35718109 tccgtctcatattagatgatttagttgactctgacacacgtaccaatgcatatgttttatccttgatatcttcaattttctactaaaaaatattatgaaa 35718010  T
Q  244 atttaatattttagaaatattcatc 268  Q
    ||||||||||||| || ||||||||    
T  35718009 atttaatattttaaaagtattcatc 35717985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 49057875 - 49057987
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||         ||||||||||||||||||||    
T  49057875 taaatgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctaccaaaaaaaattatgaaaatttaatatttt 49057974  T
Q  256 agaaatattcatc 268  Q
    | |||||||||||    
T  49057975 aaaaatattcatc 49057987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 3547681 - 3547551
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| ||||||| ||||  || |||||| |||||||||||||||||||||| |||||||||||||||||| |||| || |||        |    
T  3547681 tactccctccgtcccatattagatgacctaattgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattatctact-aaaaaaat 3547583  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    |||||||||||||||||||| |||||||||||    
T  3547582 tatgaaaatttaatattttaaaaatattcatc 3547551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 45093720 - 45093806
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||  ||||||| |||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| |||||||    
T  45093720 tactccctccgttacatattagatgatttagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctc 45093806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 28690516 - 28690647
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| ||||||| ||||  ||||||||| |||||||| ||||||||||||| |||||||||||||||||| ||| ||| |||        |    
T  28690516 tactccctccgtcacatattagatgacctagttgactccgacacacataccaatgcatatgttttatctttgatatcttcaatgctctactaaaaaaaat 28690615  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    |||||||||||||| ||| | |||||||||||    
T  28690616 tatgaaaatttaatttttaaaaaatattcatc 28690647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 151 - 268
Target Start/End: Original strand, 9145516 - 9145633
Alignment:
Q  151 catattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaat 250  Q
    ||||||| ||||  ||||||||| |||||||||||||||||||||| |||||||||||||||||| |||| || |||        ||||||| |||||||    
T  9145516 catattagatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttgaattttctactaaaaaaaattatgaagatttaat 9145615  T
Q  251 attttagaaatattcatc 268  Q
    |||||| |||||||||||    
T  9145616 attttaaaaatattcatc 9145633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 268
Target Start/End: Complemental strand, 25097426 - 25097317
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttaga 258  Q
    |||| ||||||||||   |||||||||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||| |    
T  25097426 atgacttagttgactctaacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaa 25097327  T
Q  259 aatattcatc 268  Q
    ||||||||||    
T  25097326 aatattcatc 25097317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 27848950 - 27849082
Alignment:
Q  135 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnn 234  Q
    ||||||||||||||| |  |||| ||||  |||||||||| |||| || ||||||||||||| |||||||||||||||||| ||||||| |||           
T  27848950 attactccctccgtccctcattagatgacctagttgactttgacatacataccaatgcatatgttttatctttgatatcttcaattctctact-aaaaaa 27849048  T
Q  235 nttatgaaaatttaatattttagaaatattcatc 268  Q
     |||| |||||||||||||||| |||||||||||    
T  27849049 attataaaaatttaatattttaaaaatattcatc 27849082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 7671574 - 7671443
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    |||||| |||||||||||||| ||||  ||||||| |  ||| || ||| |||||||||| |||||||||||||||||| ||||||| |||        |    
T  7671574 tactccgtccgtctcatattagatgacctagttgattcagacgcatgtatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 7671475  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||| |||||||||| |||||||||||    
T  7671474 tatgaaaatataatattttaaaaatattcatc 7671443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 18659052 - 18659183
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| | |        |    
T  18659052 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaat 18659151  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  18659152 tataaaaatttaatattttaaaaatactcatc 18659183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 21906992 - 21907079
Alignment:
Q  133 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaatt 220  Q
    ||||||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||    
T  21906992 ttattactccctccgtccctcaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaatt 21907079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 43137851 - 43137982
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||||||| ||||||||||||||| || ||||||| |||        |    
T  43137851 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatattttcaattctctactaaaaataat 43137950  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  43137951 tataaaaatttaatattttaaaaatactcatc 43137982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 268
Target Start/End: Complemental strand, 29728361 - 29728228
Alignment:
Q  135 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnn 234  Q
    ||||||||||||||| |  | |||||||  |||||||||  |||||| |||||||||||||| ||||||||| |||||||| |||| || |||           
T  29728361 attactccctccgtccctcaataaatgacctagttgactctgacacaagtaccaatgcatatgttttatcttagatatcttcaattttctactaaaaaaa 29728262  T
Q  235 nttatgaaaatttaatattttagaaatattcatc 268  Q
     |||| |||||||||||||||| |||||||||||    
T  29728261 attataaaaatttaatattttaaaaatattcatc 29728228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 7460062 - 7459950
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||    
T  7460062 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 7459963  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  7459962 aaaaatactcatc 7459950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 268
Target Start/End: Original strand, 37832899 - 37833031
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnn 235  Q
    |||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||| ||||||||||| ||||||| |||            
T  37832899 ttactccctccgtccctaaataaatgacatagttgactctgacacacataccaatgcatatgttttatttttgatatcttcaattctctactaaaaaaaa 37832998  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    |||| |||||||||||||||| ||||| |||||    
T  37832999 ttataaaaatttaatattttaaaaatactcatc 37833031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 32285409 - 32285306
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||||||||||| ||||| |||||||||||||||||| ||||||| |||        |||| || ||||||||||||| |||||||    
T  32285409 tagttgactctgacacacgtaccaatacatatgttttatctttgatatcttcaattctctactaaaaaaacttataaagatttaatattttaaaaatatt 32285310  T
Q  265 catc 268  Q
    ||||    
T  32285309 catc 32285306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 36665019 - 36665149
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||| |||||| | |||||| |||| ||| |||||| ||| |||||||||||||||||| |||||||||||||||||| | ||||| | |        |    
T  36665019 tactctctccgttttatattagatgacttaattgactccgatacacgtaccaatgcatatgttttatctttgatatcttcatttctcta-ttaaaaaaat 36665117  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||| |||||||||| |||||||||||    
T  36665118 tatgaaaatataatattttaaaaatattcatc 36665149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 34827350 - 34827408
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||||| |||||||    
T  34827350 tagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctc 34827408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 38492080 - 38492182
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||||||||||||||||| |||||||||| ||||||| ||||||| |||        |||| |||||||||||||||| |||||||    
T  38492080 tagttgactctgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctact-aaaaaaattataaaaatttaatattttaaaaatatt 38492178  T
Q  265 catc 268  Q
    ||||    
T  38492179 catc 38492182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 46483579 - 46483637
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||||| |||||||    
T  46483579 tagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctc 46483637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 268
Target Start/End: Original strand, 10437304 - 10437413
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttaga 258  Q
    |||| ||||||||||  |||||||||||||||  |||| |||||||||||||||||| ||||||  |||        |||| |||||||||||||||| |    
T  10437304 atgacttagttgactctgacacacgtaccaatttatatgttttatctttgatatcttcaattctttactaaaaaaacttataaaaatttaatattttaaa 10437403  T
Q  259 aatattcatc 268  Q
    ||||||||||    
T  10437404 aatattcatc 10437413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 268
Target Start/End: Original strand, 47638097 - 47638186
Alignment:
Q  179 acacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatattcatc 268  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||| |||        |||| |||||||||||||||| |||||||||||    
T  47638097 acacgtaccaatgcatatgttttatctttaatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatattcatc 47638186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 8559247 - 8559135
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||  ||||||| ||||||||||||| |||||||||| ||||||| ||||||| |||        |||| |||||||||||||||    
T  8559247 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 8559148  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  8559147 aaaaatactcatc 8559135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 10571386 - 10571274
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||  ||||||| ||||||| ||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||    
T  10571386 taaatgacctagttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 10571287  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  10571286 aaaaatactcatc 10571274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 45167318 - 45167385
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  45167318 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctc 45167385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 48707105 - 48707018
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||||||||| |  | ||| |||||||||||| |  |||| || ||||||||||||| |||||||||||||||||| |||||||    
T  48707105 ttactccctccgtccctaaataagtgatttagttgattctgacatacataccaatgcatatgttttatctttgatatcttcaattctc 48707018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 1327311 - 1327397
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||| |  | |||||||| |||||||||   ||| || ||||||||||||| |||||||||||||||||| |||||||    
T  1327311 tactccctccgtccctaaataaatgatctagttgactcttacatacataccaatgcatatgttttatctttgatatcttcaattctc 1327397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 5505142 - 5505057
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||| ||||||||||||||||||||  |||||||| || ||||| |||||||| |  | |||||||||| |||||||||||||||    
T  5505142 tactccatccgtctcatattaaatgatacagttgactccgtcacacataccaatg-acgttttttatctttaatatctttaattctc 5505057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 38833692 - 38833750
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  38833692 tagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctc 38833750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 51062418 - 51062476
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  51062418 tagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctc 51062476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 52668746 - 52668656
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccact 227  Q
    ||||||||||||| |  | |||||||  |||||| ||  ||||||| || |||||||||||||||||||||||||| || |||||||||||    
T  52668746 tactccctccgtccctaaataaatgacctagttggctctgacacacatatcaatgcatatattttatctttgatattttcaattctccact 52668656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 54840370 - 54840304
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattct 222  Q
    |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  54840370 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattct 54840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 51392534 - 51392434
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||   |||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||    
T  51392534 taaatgacctagttgactcttacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 51392435  T
Q  256 a 256  Q
    |    
T  51392434 a 51392434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 53066402 - 53066457
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaatt 220  Q
    |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||    
T  53066402 tagttgactctgacacacttaccaatgcatatgttttatctttgatatcttcaatt 53066457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 48143774 - 48143840
Alignment:
Q  146 cgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatat 212  Q
    ||||||||| |||||||| ||||||||| |||||| | ||||||| |||||  ||||||||||||||    
T  48143774 cgtctcatactaaatgatctagttgactccgacactcataccaatacatatggtttatctttgatat 48143840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 15503056 - 15503111
Alignment:
Q  168 ttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||| ||||| ||||| |||||||||| ||||||||||||||| || |||||||    
T  15503056 ttgactccgacatacgtatcaatgcatatgttttatctttgatatattcaattctc 15503111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 16265030 - 16265164
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |          
T  16265030 tattactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 16265129  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  16265130 aattatgaaaacttaatattttaaaaatattcatc 16265164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 24982348 - 24982482
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||| | |          
T  24982348 tattactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatatttgatatcttcaattctctattaaaaaa 24982447  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  24982448 aattatgaaaacttaatattttaaaaatattcatc 24982482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 16266159 - 16266293
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    ||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |          
T  16266159 tattattccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 16266258  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  16266259 atttatgaaaacttaatattttaaaaatattcatc 16266293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 26441634 - 26441768
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |          
T  26441634 tattactccctccgttccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 26441733  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  26441734 aattatgaaaacttaatattttaaaaatattcatc 26441768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 134 - 268
Target Start/End: Complemental strand, 3898835 - 3898701
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||| |||| || | |          
T  3898835 tattactccctccgtcccatattaaatgatctagttgacttcgacagacgtaccaatgcatatgttttatctttgatatcttcaattttctattaaaaaa 3898736  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  3898735 aattatgaaaacttaatattttaaaaatattcatc 3898701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 23569941 - 23569804
Alignment:
Q  131 acttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnn 230  Q
    ||||| ||||||||||||| |  | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||        
T  23569941 acttaatactccctccgtccctcaataaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctaccaaa 23569842  T
Q  231 nnnnnttatgaaaatttaatattttagaaatattcatc 268  Q
         ||||||||||||||||||||| |||||||||||    
T  23569841 aaaaattatgaaaatttaatattttaaaaatattcatc 23569804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 43680066 - 43680155
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||    
T  43680066 tattactccctccgtcccatattaaatgatctagttgacttcgacacgcgtaccaatgcatatgttttatctttgatatcttcaattctc 43680155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 16751714 - 16751583
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||  ||||||| ||||  ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||  ||        |    
T  16751714 tactccctccgttccatattagatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatctttaattctcttctaaacacaat 16751615  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    |||||||||||||||||||| |||||||||||    
T  16751614 tatgaaaatttaatattttaaaaatattcatc 16751583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 269
Target Start/End: Original strand, 50481278 - 50481408
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| ||||||| |||| |||||||| | |||||||||||||||||||||| |||||||||||||||||| ||||||| | |        |    
T  50481278 tactccctccgtcccatattagatgacttagttgattccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta-ttaaaaaaat 50481376  T
Q  237 tatgaaaatttaatattttagaaatattcatct 269  Q
    |||||||||||||||||||| ||||||||||||    
T  50481377 tatgaaaatttaatatttta-aaatattcatct 50481408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 38738239 - 38738108
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    |||| ||||||||| |||||| ||||  ||||||||| |||||||||||||||||||||| ||||||||||||||| || ||||||| | |        |    
T  38738239 tacttcctccgtctaatattagatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatgttcaattctcaagtaaaaaaaat 38738140  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    |||||||||||||||||||| |||||||||||    
T  38738139 tatgaaaatttaatattttaaaaatattcatc 38738108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 264
Target Start/End: Original strand, 3529176 - 3529303
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| | || | |||||| |||||||||  ||||||||||||||||||||| ||||||||||||||| || ||||||| |||        |    
T  3529176 tactccctccgtcccttaattaatgatctagttgactctgacacacgtaccaatgcatatgttttatctttgatatattcaattctctactaaaacaatt 3529275  T
Q  237 tatgaaaatttaatattttagaaatatt 264  Q
    |||||||||||||||||||| |||||||    
T  3529276 tatgaaaatttaatattttaaaaatatt 3529303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 47222214 - 47222299
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattct 222  Q
    |||| ||||| || ||||||||||||  ||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  47222214 tacttcctccatcccatattaaatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattct 47222299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 268
Target Start/End: Original strand, 25531777 - 25531909
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnn 235  Q
    |||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||            
T  25531777 ttactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaa 25531876  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    |||| |||||||||||||||| |||||||||||    
T  25531877 ttataaaaatttaatattttaaaaatattcatc 25531909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 4605020 - 4605083
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattct 222  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  4605020 atgatctagttgactccgacacacgtaccaatgcatatgttttatctttgatatctttaattct 4605083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 50539260 - 50539391
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  50539260 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 50539359  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  50539360 tataaaaatttaatattttaaaaatactcatc 50539391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 268
Target Start/End: Complemental strand, 45235101 - 45234975
Alignment:
Q  142 cctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatga 241  Q
    ||||||||||  | ||| ||| ||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||  |||        |||| |    
T  45235101 cctccgtctctgaataagtgacttagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctttactaaaaaaaattataa 45235002  T
Q  242 aaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||| |||||||||||    
T  45235001 aaatttaatattttaaaaatattcatc 45234975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 268
Target Start/End: Original strand, 32565768 - 32565877
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttaga 258  Q
    |||| ||||||||||  ||||||||||||||||||||| |||| ||||||||||||| ||||||| |||        |||| |||||||||||||||| |    
T  32565768 atgacttagttgactctgacacacgtaccaatgcatatgttttctctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaa 32565867  T
Q  259 aatattcatc 268  Q
    ||||||||||    
T  32565868 aatattcatc 32565877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 268
Target Start/End: Complemental strand, 32988611 - 32988479
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnn 235  Q
    ||||||||||||||||  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| | |            
T  32988611 ttactccctccgtctctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaa 32988512  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    |||| |||||||||||||||| ||||| |||||    
T  32988511 ttataaaaatttaatattttaaaaatactcatc 32988479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 268
Target Start/End: Complemental strand, 48219908 - 48219772
Alignment:
Q  132 cttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnn 231  Q
    |||| ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        
T  48219908 cttactactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaa 48219809  T
Q  232 nnnnttatgaaaatttaatattttagaaatattcatc 268  Q
        |||| |||||||||||||||| ||||| |||||    
T  48219808 ataattataaaaatttaatattttaaaaatactcatc 48219772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 268
Target Start/End: Original strand, 14075738 - 14075865
Alignment:
Q  140 tccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttat 239  Q
    |||||||||| ||||||| |||||  |||||||| |||||||| ||||||||||||| |||||| ||||||||||| |||| |  |||        ||||    
T  14075738 tccctccgtcccatattagatgatcgagttgactccgacacacataccaatgcatatgttttatatttgatatcttcaattatttact-aaaaaaattat 14075836  T
Q  240 gaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||| |||||||||||    
T  14075837 gaaaatttaatattttaaaaatattcatc 14075865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 52378989 - 52379075
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  52378989 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctc 52379075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 268
Target Start/End: Complemental strand, 31971626 - 31971517
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttaga 258  Q
    ||||| |||||||||  |||||| |||||||||||||| ||||||||||||||| || || |||| |||        ||||||||||||||||||||| |    
T  31971626 atgatctagttgactctgacacatgtaccaatgcatatgttttatctttgatatattcaactctctactaaaaaaaattatgaaaatttaatattttaaa 31971527  T
Q  259 aatattcatc 268  Q
    ||||||||||    
T  31971526 aatattcatc 31971517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 268
Target Start/End: Complemental strand, 48265074 - 48264941
Alignment:
Q  135 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnn 234  Q
    ||||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||| ||||||| ||||||| |||           
T  48265074 attactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctctactaaaaaaa 48264975  T
Q  235 nttatgaaaatttaatattttagaaatattcatc 268  Q
     |||| |||||||||||||||| ||||| |||||    
T  48264974 attataaaaatttaatattttaaaaatactcatc 48264941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 21034785 - 21034705
Alignment:
Q  143 ctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||||| ||||| | |||||||| |||||| |||| || | |||| ||||||||||||||||||||||||||    
T  21034785 ctccgtctcatattagatgatctggttgactttgacacatgtactaaggtatatgttttatctttgatatctttaattctc 21034705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 39354506 - 39354394
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||    
T  39354506 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 39354407  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  39354406 aaaaatactcatc 39354394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 48376186 - 48376246
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctcca 225  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  48376186 tagttaactttgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcca 48376246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 30529311 - 30529180
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||  |||||| |||||||||||||| ||||||||| |||||||| |||| || |||        |    
T  30529311 tactccctccgtccctcaataaatgacctagttgactctgacacaagtaccaatgcatatgttttatcttagatatcttcaattttctactaaaaaaaat 30529212  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| |||||||||||    
T  30529211 tataaaaatttaatattttaaaaatattcatc 30529180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 42708523 - 42708590
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||||||||  ||||||| ||||||||||||| |||||| ||||||||||| |||||||    
T  42708523 taaatgatttagttgactctgacacacataccaatgcatatgttttatatttgatatcttcaattctc 42708590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 29161861 - 29161974
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccact-nnnnnnnnttatgaaaatttaatattt 254  Q
    |||||||| |||||||||  ||||||||||||||| ||||| |||||||||||||||||| |||| || |||         |||| ||||||||||||||    
T  29161861 taaatgatctagttgactctgacacacgtaccaattcatatgttttatctttgatatcttcaattttctactaatttttttttataaaaatttaatattt 29161960  T
Q  255 tagaaatattcatc 268  Q
    || |||||||||||    
T  29161961 taaaaatattcatc 29161974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 49805517 - 49805428
Alignment:
Q  133 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattct 222  Q
    |||| |||||||||||| |  | |||||||| |||||||||  |||| || ||||||||||||| |||||||||||||||||| ||||||    
T  49805517 ttatcactccctccgtccctaaataaatgatctagttgactctgacaaacataccaatgcatatgttttatctttgatatcttcaattct 49805428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 50876362 - 50876495
Alignment:
Q  135 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnn 234  Q
    ||||||||||||||| |  | |||||||  |||||||||   |||||  ||||||||||||| |||||||||||||||||| ||||||| |||           
T  50876362 attactccctccgtccctaaataaatgacctagttgactctaacacatataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaa 50876461  T
Q  235 nttatgaaaatttaatattttagaaatattcatc 268  Q
     |||| |||||||||||||||| ||||| |||||    
T  50876462 attataaaaatttaatattttaaaaatactcatc 50876495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 38458768 - 38458815
Alignment:
Q  176 gacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  38458768 gacacacataccaatgcatatgttttatctttgatatcttcaattctc 38458815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 31698827 - 31698766
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaatt 220  Q
    |||||||||||||||  ||||||| || |||||||||||||| |||||| |||| |||||||    
T  31698827 atgatttagttgactctgacacacatatcaatgcatatatttaatctttaatatatttaatt 31698766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 41501828 - 41501783
Alignment:
Q  178 cacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||    
T  41501828 cacacgtaccaatgcatatgttttatctttgatatattcaattctc 41501783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 1849746 - 1849784
Alignment:
Q  184 taccaatgcatatattttatctttgatatctttaattct 222  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  1849746 taccaatgcatatgttttatctttgatatcttcaattct 1849784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 23340889 - 23340921
Alignment:
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  23340889 ttatgaaaatttaatattttaaaaatattcatc 23340921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 37515436 - 37515468
Alignment:
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  37515436 ttatgaaaatttaatattttaaaaatattcatc 37515468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 970135 - 970269
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| | |          
T  970135 tattactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgttatcttcaattctctattaaaaaa 970234  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  970235 aattatgaaaacttaatattttaaaaatattcatc 970269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 4300096 - 4300007
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  4300096 tattacttcctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctc 4300007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 43067226 - 43067360
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||  | |          
T  43067226 tattacttcctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctttattaaaaaa 43067325  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  43067326 aattatgaaaacttaatattttaaaaatattcatc 43067360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 39405761 - 39405895
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||| ||||||| ||||||| | |          
T  39405761 tattactccctccgtcccatattaaatgatctagttgacttcgagacacgtaccaatgcatatgttttatctttaatatcttcaattctctattaaaaaa 39405860  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| ||| |||||||    
T  39405861 aattatgaaaacttaatattttaaaaagattcatc 39405895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 16048080 - 16048169
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||| ||||||| ||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  16048080 tattactctctccgtcccatatcaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctc 16048169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 268
Target Start/End: Complemental strand, 22613973 - 22613839
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    ||||||||||| |||| ||| ||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||| |||| || | |          
T  22613973 tattactcccttcgtcccatgttaaatgatctagttgacttagacacacgtaccaatgcatatgttttatctttgatatcttcaattttctattaaaaaa 22613874  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  22613873 aattatgaaaacttaatattttaaaaatattcatc 22613839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 41411419 - 41411287
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccac-tnnnnnnnn 235  Q
    ||||||||||||| |  | || |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||              
T  41411419 tactccctccgtccctcaatagatgacttagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctacaaaaaaaaaa 41411320  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  41411319 ttatgaaaatttaatattttaaaaatattcatc 41411287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 35290314 - 35290417
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| |||        |||| |||||||||||||||| |||||||    
T  35290314 tagttgactctgacacacgtaccaatgcatatattttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatatt 35290413  T
Q  265 catc 268  Q
    ||||    
T  35290414 catc 35290417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 19889654 - 19889784
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||| ||||||||||| | ||  ||||||||| ||| |||||||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  19889654 tactccctctgtctcatattagaggacctagttgactccgatacacgtaccaatgcatatgttttatctttgatatcttcaattctctact-aaaaaaat 19889752  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    |||||||||| ||||||||| |||||||||||    
T  19889753 tatgaaaattgaatattttaaaaatattcatc 19889784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 268
Target Start/End: Original strand, 1830653 - 1830786
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccac-tnnnnnnn 234  Q
    |||||||||||||| |  | || |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||             
T  1830653 ttactccctccgtccctcaatagatgacttagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctacaaaaaaaaa 1830752  T
Q  235 nttatgaaaatttaatattttagaaatattcatc 268  Q
     ||||||||||||||||||||| |||||||||||    
T  1830753 attatgaaaatttaatattttaaaaatattcatc 1830786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 15268108 - 15268196
Alignment:
Q  135 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||||||||  ||||||||| |||||| ||| ||||||| |||||||    
T  15268108 attactcccttcgtctcatattagatgatttagttgactccgacacacgtattaatgcatatgttttatttttaatatcttcaattctc 15268196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 40316121 - 40316253
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccac-tnnnnnnnn 235  Q
    ||||||||||||| |  | || |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||              
T  40316121 tactccctccgtccctcaatagatgacttagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctacaaaaaaaaaa 40316220  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  40316221 ttatgaaaatttaatattttaaaaatattcatc 40316253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 268
Target Start/End: Original strand, 42148306 - 42148438
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnn 235  Q
    |||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||            
T  42148306 ttactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaa 42148405  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    |||| |||||||||||||||| ||||| |||||    
T  42148406 ttataaaaatttaatattttaaaaatactcatc 42148438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 39036410 - 39036541
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    |||||||||||||||  | || ||||  |||||||||  |||||||||||||||| |||| |||||||||||||||||| ||||||| |||        |    
T  39036410 tactccctccgtctctcaatagatgacatagttgactctgacacacgtaccaatgtatatgttttatctttgatatcttcaattctctactaaaaaaaat 39036509  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| |||||||||||    
T  39036510 tataaaaatttaatattttaaaaatattcatc 39036541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 42421685 - 42421771
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||| ||||||  ||||||| ||||| ||||||||| ||||||||||||| |||||||| |||||||||||||||||| |||||||    
T  42421685 tactcactccgttccatattagatgatctagttgactccgacacacgtacctatgcatatgttttatctttgatatcttcaattctc 42421771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 268
Target Start/End: Complemental strand, 4925060 - 4924968
Alignment:
Q  176 gacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||| |||||||||||    
T  4925060 gacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatattcatc 4924968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 5213155 - 5213052
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||||||||||||||||| |||||||||| ||||||| ||||||| |||        |||| |||||||||||||||| |||||||    
T  5213155 tagttgactctgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatatt 5213056  T
Q  265 catc 268  Q
    ||||    
T  5213055 catc 5213052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 37516143 - 37516230
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||||||||| |  | || ||||| |||||||||  ||||||||||||||||||||| |||||||||||||||||| |||||||    
T  37516143 ttactccctccgtccctcaatagatgatctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctc 37516230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 37843808 - 37843705
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||||||||||||||||| |||||| ||||||||||| ||||||| ||         ||||||||||||||||||||| |||||||    
T  37843808 tagttgactctgacacacgtaccaatgcatatgttttatatttgatatcttcaattctctacaaaaaaaaattatgaaaatttaatattttaaaaatatt 37843709  T
Q  265 catc 268  Q
    ||||    
T  37843708 catc 37843705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 268
Target Start/End: Original strand, 25563515 - 25563631
Alignment:
Q  152 atattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaata 251  Q
    |||||| ||||  ||||||||||| |||||||| ||||||||||| |||||||||||||||||| |||| |  |||        |||| |||||||||||    
T  25563515 atattagatgacctagttgacttcaacacacgttccaatgcatatgttttatctttgatatcttcaattttatactaaaacaaattataaaaatttaata 25563614  T
Q  252 ttttagaaatattcatc 268  Q
    ||||| |||||||||||    
T  25563615 ttttaaaaatattcatc 25563631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 29627268 - 29627399
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| || |||||||||| |||||||||||||||||| ||||||| |||        |    
T  29627268 tactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 29627367  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  29627368 tataaaaatttaatattttaaaaatactcatc 29627399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 32334904 - 32334813
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctcca 225  Q
    |||||||||||| ||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  32334904 tattactccctctgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcca 32334813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 38697963 - 38698094
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  || ||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  38697963 tactccctccgtccctaaataaatgacctaattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 38698062  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  38698063 tataaaaatttaatattttaaaaatactcatc 38698094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 39894781 - 39894912
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | ||| |||| |||||||||  |||| || ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  39894781 tactccctccgtccctaaataagtgatctagttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 39894880  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  39894881 tataaaaatttaatattttaaaaatactcatc 39894912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 40512913 - 40512810
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||| ||||| |    
T  40512913 tagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatact 40512814  T
Q  265 catc 268  Q
    ||||    
T  40512813 catc 40512810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 14475467 - 14475409
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||| |||||||||||| ||||||||| |||||||||||||||||| |||||||    
T  14475467 tagttgactccgacacacgtacaaatgcatatgttttatctttgatatcttcaattctc 14475409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 19868918 - 19868816
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| || |||| || |||        ||||||||||||||||||||| |||||||    
T  19868918 tagttgactccgacacacgtaccaatgcatatgttttatctttgctattttcaattgtctact-aaaaatattatgaaaatttaatattttaaaaatatt 19868820  T
Q  265 catc 268  Q
    ||||    
T  19868819 catc 19868816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 30779978 - 30779876
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    ||||||||| |||||||||||||||| ||||| |||||||||| ||||||| ||||| | |||        ||||||||||||||||||||| |||||||    
T  30779978 tagttgactccgacacacgtaccaatacatatgttttatctttcatatcttcaattcactact-aaaaaaattatgaaaatttaatattttaaaaatatt 30779880  T
Q  265 catc 268  Q
    ||||    
T  30779879 catc 30779876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 35448258 - 35448172
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  35448258 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctc 35448172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 23988578 - 23988662
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaatt 220  Q
    |||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||    
T  23988578 ttactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaatt 23988662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 32002256 - 32002144
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||| || ||||||  |||| || ||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||    
T  32002256 taaatgatctacttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 32002157  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  32002156 aaaaatactcatc 32002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 5364448 - 5364551
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||| ||||||||||||| ||||||||||||||| || ||||||| |||        |||| |||||||||||||||| ||||| |    
T  5364448 tagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctactaaaaaaaattataaaaatttaatattttaaaaatact 5364547  T
Q  265 catc 268  Q
    ||||    
T  5364548 catc 5364551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 43517293 - 43517190
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||||||| ||||||||| |||||||||||||||| | ||||||| |||        |||| |||| ||||||||||| |||||||    
T  43517293 tagttgactctgacacacgtactaatgcatatgttttatctttgatatcatcaattctctactaaaaaaaattataaaaaattaatattttaaaaatatt 43517194  T
Q  265 catc 268  Q
    ||||    
T  43517193 catc 43517190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 19088016 - 19087946
Alignment:
Q  152 atattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattct 222  Q
    |||||| ||||  ||||||||| |||||||||||||||||||||  |||||| | ||||||||| ||||||    
T  19088016 atattagatgacgtagttgactccgacacacgtaccaatgcataagttttatttatgatatcttcaattct 19087946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 32300569 - 32300653
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaatt 220  Q
    ||||||| ||| |||||||||||||||   ||||||||  | ||||  || |||||||||| |||||||||| ||||||||||||    
T  32300569 ttactccttccatctcatattaaatgacacagttgactctgtcacaaatatcaatgcatattttttatctttaatatctttaatt 32300653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 14475392 - 14475360
Alignment:
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  14475392 ttatgaaaatttaatattttaaaaatattcatc 14475360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 268
Target Start/End: Complemental strand, 31128069 - 31127935
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |          
T  31128069 tattacttcctctgtcccatattaaatgatttagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 31127970  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  31127969 aattatgaaaacttaatattttaaaaatattcatc 31127935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 11854521 - 11854610
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11854521 tattactccctccgtcccatattaaacgatctagttgacttcgacacacgtaccaatgcatatattttatttttgatatcttcaattctc 11854610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 18809273 - 18809407
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    ||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| | |          
T  18809273 tattactccctccatcccatattaaatgatctagttgagttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 18809372  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| |||| |||||| |||||||||||    
T  18809373 aattatgaaaacttaacattttaaaaatattcatc 18809407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 44123673 - 44123803
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||| ||||||| ||||||| ||||| ||||||||| ||||||||||| |||||||||| |||||||||||| ||||| ||||||| |||        |    
T  44123673 tactctctccgtcccatattagatgatctagttgactccgacacacgtatcaatgcatatgttttatctttgaaatcttcaattctctactaaaaaaaat 44123772  T
Q  237 tatgaaaatttaatattttagaaatattcat 267  Q
    |||||||||||||||||||| ||||||||||    
T  44123773 tatgaaaatttaatattttaaaaatattcat 44123803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 12893531 - 12893662
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    |||| ||||||||  ||| || || |||||||||||| ||||||||||| |||||||||| |||||||||||||||||| ||||||| |||        |    
T  12893531 tacttcctccgtcctataatagatcatttagttgactccgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 12893630  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    |||||||||||||||||||| |||||||||||    
T  12893631 tatgaaaatttaatattttaaaaatattcatc 12893662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 136 - 268
Target Start/End: Complemental strand, 1581027 - 1580895
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnn 235  Q
    |||||||||||||| |  | |||||||  |||||||||  |||||||||| ||||||||||||||||||||||||||||| ||||||| |||            
T  1581027 ttactccctccgtccctgaataaatgacctagttgactctgacacacgtatcaatgcatatattttatctttgatatcttcaattctctactaaaaaaat 1580928  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    |||| |||||||||||||||| |||||||||||    
T  1580927 ttataaaaatttaatattttaaaaatattcatc 1580895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 13138374 - 13138262
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||    
T  13138374 taaatgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 13138275  T
Q  256 agaaatattcatc 268  Q
    | |||||||||||    
T  13138274 aaaaatattcatc 13138262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 268
Target Start/End: Original strand, 29790941 - 29791073
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnn 235  Q
    |||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||            
T  29790941 ttactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaa 29791040  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    |||| |||||||||||||||| |||||||||||    
T  29791041 ttataaaaatttaatattttaaaaatattcatc 29791073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 8351141 - 8351010
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | ||| |||| |||||||||  ||||||||||||| ||||||| |||||||||||||||||| ||||||| |||        |    
T  8351141 tactccctccgtccctaaataagtgatctagttgactctgacacacgtaccagtgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 8351042  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| |||||||||||    
T  8351041 tataaaaatttaatattttaaaaatattcatc 8351010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 40013651 - 40013782
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| | || |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  40013651 tactccctccgtcccttaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 40013750  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  40013751 tataaaaatttaatattttaaaaatactcatc 40013782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 886298 - 886242
Alignment:
Q  167 gttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  886298 gttgactccgacacacgtaccaatgcatatgttttatctttgatatctttaattctc 886242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 6470873 - 6470976
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  |||||||||| |||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||| |||||||    
T  6470873 tagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatatt 6470972  T
Q  265 catc 268  Q
    ||||    
T  6470973 catc 6470976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 268
Target Start/End: Original strand, 14522402 - 14522511
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttaga 258  Q
    ||||| ||||||| ||  ||||||||| |||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||| |    
T  14522402 atgatctagttgattttaacacacgtatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaatttataaaaatttaatattttaaa 14522501  T
Q  259 aatattcatc 268  Q
    ||||||||||    
T  14522502 aatattcatc 14522511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 45253749 - 45253880
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgac-acacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnn 235  Q
    ||||||||| ||| | || || ||||| ||||||||| |||| |||||||||||||||||| |||||| ||||||||||| ||||||| ||             
T  45253749 tactccctctgtcccttaatagatgatctagttgactccgacgacacgtaccaatgcatatgttttatttttgatatcttcaattctctac-aaaaaaaa 45253847  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  45253848 ttatgaaaatttaatattttaaaaatattcatc 45253880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 45081810 - 45081937
Alignment:
Q  135 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnn 234  Q
    ||||||||||||||| |  | ||||| |  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||           
T  45081810 attactccctccgtccctaaataaataacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaa 45081909  T
Q  235 nttatgaaaatttaatattttagaaata 262  Q
     |||| |||||||||||||||| |||||    
T  45081910 attataaaaatttaatattttaaaaata 45081937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 3293363 - 3293277
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||  ||||||||||||| |||||||||||||||||| |||||||    
T  3293363 tactccctccgtccctaaataaatgatctagttgactctgacacatataccaatgcatatgttttatctttgatatcttcaattctc 3293277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 267
Target Start/End: Original strand, 10657986 - 10658107
Alignment:
Q  145 ccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaa 244  Q
    |||||| |||| | |||| |||||||||| ||||||| |||||||  ||||| |||||||||||||||||| ||||||| |||        |||| ||||    
T  10657986 ccgtcttatatcagatgacttagttgactccgacacatgtaccaacacatatgttttatctttgatatcttcaattctctactaaaaaaaattat-aaaa 10658084  T
Q  245 tttaatattttagaaatattcat 267  Q
    |||||||||||| ||||||||||    
T  10658085 tttaatattttaaaaatattcat 10658107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 38845200 - 38845286
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  38845200 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctc 38845286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 14847238 - 14847295
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattct 222  Q
    ||||||| | ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  14847238 tagttgattccgacacacgcaccaatgcatatgttttatctttgatatctttaattct 14847295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 30289924 - 30290049
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||  |||| || ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  30289924 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 30290023  T
Q  237 tatgaaaatttaatattttagaaata 262  Q
    ||| |||||||||||||||| |||||    
T  30290024 tataaaaatttaatattttaaaaata 30290049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 25256344 - 25256420
Alignment:
Q  147 gtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||| |||||||| ||||||||| ||||||   |||||||||| || |||||||||||||||||| |||||||    
T  25256344 gtctcatactaaatgatctagttgactccgacacttataccaatgcaaatgttttatctttgatatcttcaattctc 25256420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 2805737 - 2805606
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||   ||||||||  |||| || ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  2805737 tactccctccgtccctaaataaatgacccagttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 2805638  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  2805637 tataaaaatttaatattttaaaaatactcatc 2805606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 30380530 - 30380661
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | ||| |||| || ||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  30380530 tactccctccgtccctaaataagtgatctaattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 30380629  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||  |||||||||||||||| ||||| |||||    
T  30380630 taaaaaaatttaatattttaaaaatactcatc 30380661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 43066146 - 43066257
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||  |||        |||| |||||||||||||||    
T  43066146 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctttact-aaaaaaattataaaaatttaatatttt 43066244  T
Q  256 agaaatattcatc 268  Q
    | |||||||||||    
T  43066245 aaaaatattcatc 43066257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 38739654 - 38739788
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    ||||||||||||||||    | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||| ||||||| ||||||| | |          
T  38739654 tattactccctccgtccttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctctattaaaaaa 38739753  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      |||| |||||||||||||||| ||||| |||||    
T  38739754 aattataaaaatttaatattttaaaaatactcatc 38739788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 9302563 - 9302483
Alignment:
Q  188 aatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatattcatc 268  Q
    |||| |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||||| |||||||||||    
T  9302563 aatgtatatgttttatctttgatatcttcaattctcaactaaaaaaatttatgaaaatttaatattttaaaaatattcatc 9302483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 23764694 - 23764626
Alignment:
Q  156 taaatgatttagttgacttcgacaca-cgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||| || ||||||||||||||||| ||||||||||||||| |||||| |||||||| || |||||||    
T  23764694 taaataatctagttgacttcgacacaacgtaccaatgcatatgttttatatttgatatattcaattctc 23764626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 268
Target Start/End: Original strand, 39361164 - 39361256
Alignment:
Q  176 gacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||| ||||||||||||| |||||| ||||||||||| ||||||| |||        |||| |||||||||||||||| ||||| |||||    
T  39361164 gacacacataccaatgcatatgttttatttttgatatcttcaattctctactaaaaaattttataaaaatttaatattttaaaaatactcatc 39361256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 37709899 - 37710030
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||   |||||| |||||||| |||| |||||||||||||||||| ||||||| | |        |    
T  37709899 tactccctccgtccctaaataaatgacctagttgactctaacacacataccaatgtatatgttttatctttgatatcttcaattctctattaaaaaaact 37709998  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  37709999 tataaaaatttaatattttaaaaatactcatc 37710030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 2986339 - 2986424
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||||||||||  | ||| |||  |||||||||  ||||||| ||||||||||||| ||||||| |||||||||| |||||||    
T  2986339 tactccctccgtctctgaataagtgacctagttgactctgacacacataccaatgcatatgttttatc-ttgatatcttcaattctc 2986424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 20671662 - 20671594
Alignment:
Q  151 catattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaatt 220  Q
    ||||||| |||||||||||||||| ||||||  || |||| ||||| |||||| ||| ||||||||||||    
T  20671662 catattagatgatttagttgactt-gacacatatatcaatacatattttttatatttaatatctttaatt 20671594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 3383415 - 3383495
Alignment:
Q  142 cctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattct 222  Q
    |||||||| ||||||| || |||||||||| |  || || | ||| |||||||||||||||||||| || |||| ||||||    
T  3383415 cctccgtcccatattagataatttagttgattatgaaactcatactaatgcatatattttatctttaatttcttcaattct 3383495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 20167739 - 20167707
Alignment:
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  20167739 ttatgaaaatttaatattttaaaaatattcatc 20167707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 23764611 - 23764579
Alignment:
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  23764611 ttatgaaaatttaatattttaaaaatattcatc 23764579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 268
Target Start/End: Complemental strand, 10464379 - 10464245
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    |||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||| | |          
T  10464379 tattactccctccgtcccatattaaatgatatagttgactttgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 10464280  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  10464279 aattatgaaaacttaatattttaaaaatattcatc 10464245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 268
Target Start/End: Complemental strand, 35501011 - 35500877
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |          
T  35501011 tattactccctccgtcccatattaaatgatctagttaacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 35500912  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  35500911 aattatgaaaacttaatattttaaaaatattcatc 35500877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 37231828 - 37231739
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  37231828 tattactccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctc 37231739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 34478272 - 34478141
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  34478272 tactccctccgtcccatattaaataacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 34478173  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    |||||||| ||||||||||| |||||||||||    
T  34478172 tatgaaaacttaatattttaaaaatattcatc 34478141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 264
Target Start/End: Original strand, 36643159 - 36643289
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    ||||||| ||| |||| ||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |          
T  36643159 tattacttccttcgtcccatattaaatgatctaattgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 36643258  T
Q  234 nnttatgaaaatttaatattttagaaatatt 264  Q
      ||||||||| ||||||||||| |||||||    
T  36643259 aattatgaaaacttaatattttaaaaatatt 36643289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 268
Target Start/End: Original strand, 21392040 - 21392149
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttaga 258  Q
    ||||| |||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||| |||        |||| |||||||||||||||| |    
T  21392040 atgatctagttgactctgacacacgtaccaatgcatatgttttatctttgatatctttaattctctactaaaaaaaattataaaaatttaatattttaaa 21392139  T
Q  259 aatattcatc 268  Q
    ||||||||||    
T  21392140 aatattcatc 21392149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 268
Target Start/End: Original strand, 48531344 - 48531453
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttaga 258  Q
    |||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| ||||||| |||        |||| |||||||||||||||| |    
T  48531344 atgatttagttgactctgacacacgtatcaatgcatatattttatctttgatatcttcaattctctactaaaaaatattataaaaatttaatattttaaa 48531443  T
Q  259 aatattcatc 268  Q
    ||||||||||    
T  48531444 aatattcatc 48531453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 36905524 - 36905657
Alignment:
Q  135 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnn 234  Q
    ||||||||||||||| |  | ||||||||||||||||||  ||||||| ||||||| ||||| |||||||||||||||||| ||||||| |||           
T  36905524 attactccctccgtccctaaataaatgatttagttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctactaaaaaaa 36905623  T
Q  235 nttatgaaaatttaatattttagaaatattcatc 268  Q
     |||| |||||||||||||||| ||||| |||||    
T  36905624 attataaaaatttaatattttaaaaatactcatc 36905657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 268
Target Start/End: Complemental strand, 29770732 - 29770604
Alignment:
Q  140 tccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttat 239  Q
    ||||| |||| ||||||| | ||| ||||||||||||||| ||||||| |||||||| |||||| ||||||||||| ||| ||| | |        ||||    
T  29770732 tcccttcgtcccatattagaggatctagttgacttcgacatacgtaccgatgcatattttttatttttgatatcttcaatgctctattaaaaaaaattat 29770633  T
Q  240 gaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||| |||||||||||    
T  29770632 gaaaatttaatattttaaaaatattcatc 29770604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 268
Target Start/End: Original strand, 19072765 - 19072900
Alignment:
Q  133 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnn 232  Q
    ||||||||||||||||| |  | |||||||  ||||||| |  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||         
T  19072765 ttattactccctccgtccctaaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaa 19072864  T
Q  233 nnnttatgaaaatttaatattttagaaatattcatc 268  Q
       |||| |||||||||||||||| ||||| |||||    
T  19072865 aaattataaaaatttaatattttaaaaatactcatc 19072900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 23474202 - 23474099
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  |||||||||| |||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||| |||||||    
T  23474202 tagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatatt 23474103  T
Q  265 catc 268  Q
    ||||    
T  23474102 catc 23474099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 28185669 - 28185538
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||| ||||| |||||||||||||||||||||||||| |||        |    
T  28185669 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatacatatgttttatctttgatatctttaattctctactaaaaaaaat 28185570  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  28185569 tataaaaatttaatattttaaaaatactcatc 28185538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 31466591 - 31466488
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||  |||        |||| |||||||||||||||| |||||||    
T  31466591 tagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctatactaaaaaaaattataaaaatttaatattttaaaaatatt 31466492  T
Q  265 catc 268  Q
    ||||    
T  31466491 catc 31466488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 36819696 - 36819827
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  36819696 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 36819795  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  36819796 tataaaaatttaatattttaaaaatactcatc 36819827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 268
Target Start/End: Complemental strand, 18795363 - 18795270
Alignment:
Q  175 cgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatattcatc 268  Q
    |||||||||||| |||| |||| |||||||||||||||||| ||||||| |||        ||||||||||||||||||||| |||||||||||    
T  18795363 cgacacacgtactaatgtatatgttttatctttgatatcttaaattctctactaaaaaaaattatgaaaatttaatattttaaaaatattcatc 18795270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 42086880 - 42086768
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||    
T  42086880 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 42086781  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  42086780 aaaaatactcatc 42086768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 268
Target Start/End: Original strand, 47080979 - 47081111
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnn 235  Q
    |||||||||||||| |  | | |||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||            
T  47080979 ttactccctccgtccctaaatgaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttaaattctctactaaaaaaaa 47081078  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    |||| |||||||||||||||| ||||| |||||    
T  47081079 ttataaaaatttaatattttaaaaatactcatc 47081111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 268
Target Start/End: Complemental strand, 31497965 - 31497834
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnn 235  Q
    |||||||||| ||| ||||||| || |  ||||||||| |||||||| ||| ||| ||||| |||||||||||||||||| |||| || |||            
T  31497965 ttactccctcggtcccatattagataacctagttgactccgacacacatactaatacatatgttttatctttgatatcttcaattatctact-aaaaaag 31497867  T
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  31497866 ttatgaaaatttaatattttaaaaatattcatc 31497834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 32619203 - 32619072
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | ||||||| ||||||||||  ||||||| || |||||||||| |||||| ||||||||||| ||||||| |||        |    
T  32619203 tactccctccgtccctaaataaatgacttagttgactctgacacacatatcaatgcatatgttttatttttgatatcttcaattctctactaaaaaaaat 32619104  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  32619103 tataaaaatttaatattttaaaaatactcatc 32619072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 42834553 - 42834422
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    |||||||||||||||  | |||||||  || ||||||| || |||| |||||||| |||| |||||||||||||||||| ||||||  |||        |    
T  42834553 tactccctccgtctctaaataaatgacctatttgactttgatacacataccaatgtatatgttttatctttgatatcttcaattctttactaaaaaaaat 42834454  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| |||||||||||    
T  42834453 tataaaaatttaatattttaaaaatattcatc 42834422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 47537967 - 47538054
Alignment:
Q  181 acgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatattcatc 268  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||| |||||||||||    
T  47537967 acgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatattcatc 47538054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 37951187 - 37951075
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||  ||| ||| ||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||    
T  37951187 taaatgacctagttgactctgacgcacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 37951088  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  37951087 aaaaatactcatc 37951075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 2400285 - 2400416
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||  ||||||||||||| ||||||||||||||||||  |||||| |||        |    
T  2400285 tactccctccgtccctaaataaatgacctagttgactctgacacatataccaatgcatatgttttatctttgatatcttccattctctactaaaaaatat 2400384  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  2400385 tataaaaatttaatattttaaaaatactcatc 2400416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 268
Target Start/End: Complemental strand, 36859429 - 36859338
Alignment:
Q  177 acacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatattcatc 268  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||| ||||| |||||    
T  36859429 acacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatactcatc 36859338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 44479953 - 44479895
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  44479953 tagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctc 44479895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 42493895 - 42493806
Alignment:
Q  133 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattct 222  Q
    ||||||||||||| ||| ||||||||||||   ||||||||  | ||||| || ||||| |||| |||||||||| ||||||||||||||    
T  42493895 ttattactccctctgtcccatattaaatgacacagttgactctgtcacacatatcaatgtatattttttatctttaatatctttaattct 42493806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 47713735 - 47713638
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaata 262  Q
    |||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||| || |||        |||| |||||||||||||||| |||||    
T  47713735 tagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctactaaaaaaaattataaaaatttaatattttaaaaata 47713638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 4612319 - 4612263
Alignment:
Q  166 agttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattct 222  Q
    ||||||||  ||||||  |||||||||||||||||||| ||||||||||| ||||||    
T  4612319 agttgactctgacacaaataccaatgcatatattttatgtttgatatcttcaattct 4612263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 2450689 - 2450775
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatat-attttatctttgatatctttaattctc 223  Q
    |||||||||||||| |||||||| ||  ||||| ||| ||||||  ||||||||||||||  |||||||||| ||||||| |||||||    
T  2450689 tactccctccgtcttatattaaa-gacctagtttactccgacacctgtaccaatgcatatgtttttatctttaatatcttcaattctc 2450775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 40348410 - 40348493
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaatt 220  Q
    ||||||||||||| ||||||| || |  |||||||||  ||||| | || |||||||||| |||||||||| |||| |||||||    
T  40348410 tactccctccgtcccatattagataacgtagttgactcagacactcatatcaatgcatattttttatctttaatatatttaatt 40348493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 33613315 - 33613347
Alignment:
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  33613315 ttatgaaaatttaatattttaaaaatattcatc 33613347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 41796755 - 41796787
Alignment:
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  41796755 ttatgaaaatttaatattttaaaaatattcatc 41796787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 42493679 - 42493647
Alignment:
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  42493679 ttatgaaaatttaatattttaaaaatattcatc 42493647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 44389448 - 44389416
Alignment:
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  44389448 ttatgaaaatttaatattttaaaaatattcatc 44389416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Original strand, 46657732 - 46657764
Alignment:
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  46657732 ttatgaaaatttaatattttaaaaatattcatc 46657764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 40598125 - 40598214
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  40598125 tattactccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctc 40598214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 30708728 - 30708859
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    |||||||||||||||  | ||| |||  |||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  30708728 tactccctccgtctctgaataagtgacctagttgactttgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 30708827  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| |||||||||||    
T  30708828 tataaaaatttaatattttaaaaatattcatc 30708859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 138 - 264
Target Start/End: Complemental strand, 41463777 - 41463651
Alignment:
Q  138 actccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnntt 237  Q
    |||||||||||| |  | |||||||  ||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| |||        ||    
T  41463777 actccctccgtccctcaataaatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaatt 41463678  T
Q  238 atgaaaatttaatattttagaaatatt 264  Q
    ||||||||||||||||||| |||||||    
T  41463677 atgaaaatttaatattttaaaaatatt 41463651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 268
Target Start/End: Complemental strand, 39418259 - 39418150
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttaga 258  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| || |||        ||||||||||||||||||||| |    
T  39418259 atgatctagttgacttcgacacacttaccaatacatatattttatctttgatatcttcaattatctactaaaaaaaattatgaaaatttaatattttaaa 39418160  T
Q  259 aatattcatc 268  Q
    ||||||||||    
T  39418159 aatattcatc 39418150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 267
Target Start/End: Complemental strand, 38137793 - 38137662
Alignment:
Q  135 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnn 234  Q
    |||||||||| ||| |||||||| ||||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||| | |||           
T  38137793 attactcccttcgtttcatattagatgatctagttgactccgacacacgtacaaatgcatatgttttatctttgatatcttcaattccctactaaaattt 38137694  T
Q  235 nttatgaaaatttaatattttagaaatattcat 267  Q
     |||||||||||||||| |||| ||||||||||    
T  38137693 tttatgaaaatttaata-tttaaaaatattcat 38137662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 32776161 - 32776030
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| | || || ||||  ||||||||| ||| |||||||||||||||||| |||||||||||||||||| ||||||| ||         |    
T  32776161 tactccctccgtcccttaatagatgacctagttgactccgatacacgtaccaatgcatatgttttatctttgatatcttcaattctctacaaaaataaat 32776062  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    |||||||||||||||||||| |||||||||||    
T  32776061 tatgaaaatttaatattttaaaaatattcatc 32776030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 4045494 - 4045363
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||||| |||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| | |        |    
T  4045494 tactccctccgtccctaaataaatgatttggttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaat 4045395  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| |||||||||||    
T  4045394 tataaaaatttaatattttaaaaatattcatc 4045363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 7443124 - 7443021
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||| |||||||    
T  7443124 tagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatatt 7443025  T
Q  265 catc 268  Q
    ||||    
T  7443024 catc 7443021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 38963547 - 38963650
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| |||| ||||||| ||         ||||||||||||||||||||| |||||||    
T  38963547 tagttaacttcgacacacgtaccaatgcatatgttttatctttgatttcttcaattctctacaaaaaaaaattatgaaaatttaatattttaaaaatatt 38963646  T
Q  265 catc 268  Q
    ||||    
T  38963647 catc 38963650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 3987493 - 3987362
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||| ||||| |||||||||||||||||| ||||||| |||        |    
T  3987493 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctactaaaaaaaat 3987394  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  3987393 tataaaaatttaatattttaaaaatactcatc 3987362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 23671376 - 23671507
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  23671376 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 23671475  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  23671476 tataaaaatttaatattttaaaaatactcatc 23671507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 268
Target Start/End: Original strand, 332277 - 332408
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccact-nnnnnnn 234  Q
    |||||||||||||| ||||||| ||||  || |||||| ||||||  ||||||| |||||| |||||||||||||||||| ||||||| |||            
T  332277 ttactccctccgtcccatattagatgacctatttgactccgacac--gtaccaacgcatatgttttatctttgatatcttcaattctctactaaaaaaaa 332374  T
Q  235 nttatgaaaatttaatattttagaaatattcatc 268  Q
     ||||||||||||||||||||| |||||||||||    
T  332375 attatgaaaatttaatattttaaaaatattcatc 332408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 42951339 - 42951469
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnn 235  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||| ||||| |||| |||||| |||||||| ||  |||||  |||            
T  42951339 ttactccctccatcttatattagatgatctagttgactccgacacacgtatcaatgtatatgttttatttttgatattttctattctttactaataaaaa 42951438  T
Q  236 ttatgaaaatttaatattttagaaatattca 266  Q
    ||||||||||||||||||||| |||||||||    
T  42951439 ttatgaaaatttaatattttaaaaatattca 42951469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 268
Target Start/End: Original strand, 4045872 - 4045981
Alignment:
Q  159 atgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttaga 258  Q
    ||||||||||||| |  |||| |||||| ||||||||| ||||||||||||||||||||||| || |||        |||| |||||||||||||||| |    
T  4045872 atgatttagttgattctgacatacgtactaatgcatatgttttatctttgatatctttaattttctactaaaaaaaattataaaaatttaatattttaaa 4045971  T
Q  259 aatattcatc 268  Q
    ||||||||||    
T  4045972 aatattcatc 4045981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 268
Target Start/End: Original strand, 40898646 - 40898769
Alignment:
Q  143 ctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaa 242  Q
    |||| ||| |||||| ||||| ||||||||| |||||||||||| |||| |||| |||||||||||||||||| ||||||| |||        |||||||    
T  40898646 ctccatcttatattagatgatctagttgactccgacacacgtactaatgtatatgttttatctttgatatcttcaattctctactaaaaaaaattatgaa 40898745  T
Q  243 aatttaatattttagaaatattcatc 268  Q
    || ||||||||||| |||||||||||    
T  40898746 aa-ttaatatttta-aaatattcatc 40898769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 16942053 - 16941941
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||| |||||||||  ||||||| ||||||||||||| ||||||||||||||| || ||||||| |||        |||| |||||||||||||||    
T  16942053 taaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctactaaaaaaaattataaaaatttaatatttt 16941954  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  16941953 aaaaatactcatc 16941941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 17012718 - 17012606
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||| |||||||||  ||||||| ||||||||||||| ||||||||||||||| || ||||||| |||        |||| |||||||||||||||    
T  17012718 taaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctactaaaaaaaattataaaaatttaatatttt 17012619  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  17012618 aaaaatactcatc 17012606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 264
Target Start/End: Complemental strand, 44283501 - 44283413
Alignment:
Q  176 gacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||| |||        |||| |||||||||||||||| |||||||    
T  44283501 gacacacataccaatgcatatattttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatatt 44283413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 18718239 - 18718370
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| || |||||||||| |||||||||||||||||| ||||||| |||        |    
T  18718239 tactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 18718338  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  18718339 tataaaaatttaatattttaaaaatactcatc 18718370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 42038551 - 42038654
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||| ||||| |    
T  42038551 tagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatact 42038650  T
Q  265 catc 268  Q
    ||||    
T  42038651 catc 42038654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 14372077 - 14372163
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  14372077 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctc 14372163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 20517419 - 20517505
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||||||||||  | |||||||  || ||||||  ||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  20517419 tactccctccgtctctaaataaatgacataattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctc 20517505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 14707776 - 14707664
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||  |||        |||| |||||||||||||||    
T  14707776 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctttactaaaaaaaattataaaaatttaatatttt 14707677  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  14707676 aaaaatactcatc 14707664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 36199193 - 36199081
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||| |||||||||  ||||||| ||| ||||||||| ||||||||||||||||||  |||||| |||        |||| |||||||||||||||    
T  36199193 taaatgatctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcgattctctactaaaaaaaattataaaaatttaatatttt 36199094  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  36199093 aaaaatactcatc 36199081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 44330403 - 44330515
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| | |        |||| |||||||||||||||    
T  44330403 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaattatcaaaatttaatatttt 44330502  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  44330503 aaaaatactcatc 44330515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 9877316 - 9877213
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  |||||||||   ||||||||| |||||||||||||||||||||||||| |||        |||| ||||||||||||||||  ||||||    
T  9877316 tagttgactctgacacacgtgtgaatgcatatgttttatctttgatatctttaattctctactaaaaaatattataaaaatttaatattttaacaatatt 9877217  T
Q  265 catc 268  Q
    ||||    
T  9877216 catc 9877213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 27559575 - 27559706
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| || ||||| |||| |||||||||||||||||| ||||||| | |        |    
T  27559575 tactccctccgtccctaaataaatgatctagttgactctgacacacatatcaatgtatatgttttatctttgatatcttcaattctctattaaaaaaaat 27559674  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  27559675 tataaaaatttaatattttaaaaatactcatc 27559706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 41173018 - 41172887
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  || ||||||  ||||||| ||||||||||||| |||||||||||||||||| |||| || |||        |    
T  41173018 tactccctccgtccctaaataaatgacctacttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctactaaaaaaaat 41172919  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  41172918 tataaaaatttaatattttaaaaatactcatc 41172887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 30776405 - 30776323
Alignment:
Q  186 ccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||| |||||||||||    
T  30776405 ccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatattcatc 30776323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 34826912 - 34826998
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||| ||||||||| |||||||||||||||||| |||||||    
T  34826912 tactccctccgtccctaaataaatgacctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctc 34826998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 38588131 - 38588069
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaa 218  Q
    |||||||| |||||||||  || |||| ||||||||||||| |||||||||||||||||||||    
T  38588131 taaatgatctagttgactctgatacacataccaatgcatatgttttatctttgatatctttaa 38588069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 40425510 - 40425424
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||| |  | |||||||  ||||||| |  ||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  40425510 tactccctccgtccctaaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcaattctc 40425424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 4083235 - 4083292
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattct 222  Q
    ||||||||| |||||||| || |||||||||| |||||||||| ||||||||||||||    
T  4083235 tagttgactccgacacacatatcaatgcatatgttttatctttaatatctttaattct 4083292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 24283181 - 24283133
Alignment:
Q  175 cgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||||||  |||||||| |||||||||||||||||| |||||||    
T  24283181 cgacacacgtactgatgcatatgttttatctttgatatcttcaattctc 24283133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 5030504 - 5030462
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatcttt 207  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||    
T  5030504 tagttgactttgacacacataccaatgcatattttttatcttt 5030462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 43925305 - 43925256
Alignment:
Q  174 tcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||| ||||| || ||||||||| |||||||||||||||||| |||||||    
T  43925305 tcgatacacgaactaatgcatatgttttatctttgatatcttcaattctc 43925256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 5030443 - 5030411
Alignment:
Q  236 ttatgaaaatttaatattttagaaatattcatc 268  Q
    ||||||||||||||||||||| |||||||||||    
T  5030443 ttatgaaaatttaatattttaaaaatattcatc 5030411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 33121542 - 33121673
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| | || |||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||         |    
T  33121542 tactccctccgtcccttaataaatgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctaccaaaaaaaat 33121641  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    |||||||||||||||||||| |||||||||||    
T  33121642 tatgaaaatttaatattttaaaaatattcatc 33121673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 25163161 - 25163295
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnn 233  Q
    |||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||   |          
T  25163161 tattactctcttcgtctcatattaaatgatctagttgatttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctgttaaaaaa 25163260  T
Q  234 nnttatgaaaatttaatattttagaaatattcatc 268  Q
      ||||||||| ||||||||||| |||||||||||    
T  25163261 aattatgaaaacttaatattttaaaaatattcatc 25163295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 268
Target Start/End: Complemental strand, 13207219 - 13207083
Alignment:
Q  132 cttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnn 231  Q
    |||||||||| |||||||  | |||| ||||  |||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||| ||         
T  13207219 cttattactctctccgtcctacattagatgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctacaaaaa 13207120  T
Q  232 nnnnttatgaaaatttaatattttagaaatattcatc 268  Q
        |||||||||||| |||||||| |||||||||||    
T  13207119 aaaattatgaaaattttatattttaaaaatattcatc 13207083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 643692 - 643561
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  643692 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 643593  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| |||||||||||    
T  643592 tataaaaatttaatattttaaaaatattcatc 643561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 24150760 - 24150872
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||  ||||||| |||||||||||||||||||||||||||||||| ||||||| |||        |||| |||||||||||||||    
T  24150760 taaatgacctagttgactctgacacacataccaatgcatatattttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 24150859  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  24150860 aaaaatactcatc 24150872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 25435431 - 25435542
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||| |||||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |||| ||||| |||||||||    
T  25435431 taaatgatctagttgactt-gacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatataatatttt 25435529  T
Q  256 agaaatattcatc 268  Q
    | |||||||||||    
T  25435530 aaaaatattcatc 25435542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 133 - 268
Target Start/End: Complemental strand, 7098134 - 7098003
Alignment:
Q  133 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnn 232  Q
    ||||||||||||||||| |    |||||||| |||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||| || |||         
T  7098134 ttattactccctccgtccc----taaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctactaaaaa 7098039  T
Q  233 nnnttatgaaaatttaatattttagaaatattcatc 268  Q
       |||| |||||||||||||||| ||||| |||||    
T  7098038 aaattataaaaatttaatattttaaaaatactcatc 7098003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 29986391 - 29986288
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||        |||| |||||||||||||||| ||||| |    
T  29986391 tagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatact 29986292  T
Q  265 catc 268  Q
    ||||    
T  29986291 catc 29986288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 8796046 - 8796136
Alignment:
Q  133 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    ||||||||| ||||||| |  | ||||| || |||||||||  ||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  8796046 ttattactcactccgtccctaaataaatcatctagttgactctgacacacataccaatgtatatgttttatctttgatatctttaattctc 8796136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 11114563 - 11114696
Alignment:
Q  135 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnn 234  Q
    ||||||||||||||| |  | |||||||  ||||||| |  ||||||| ||||||||||||| ||||||||||||||||||  |||||| |||           
T  11114563 attactccctccgtccctcaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcgattctctactaaaaaaa 11114662  T
Q  235 nttatgaaaatttaatattttagaaatattcatc 268  Q
     |||| |||||||||||||||| ||||| |||||    
T  11114663 attataaaaatttaatattttaaaaatactcatc 11114696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 220
Target Start/End: Complemental strand, 16434791 - 16434706
Alignment:
Q  135 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaatt 220  Q
    ||||||||||||||| ||||||| ||||  |||||||||  ||||| | ||||||||||||| | |||||||| ||||||||||||    
T  16434791 attactccctccgtcccatattagatgaactagttgactcagacactcataccaatgcatatttcttatctttaatatctttaatt 16434706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 29403641 - 29403730
Alignment:
Q  134 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctc 223  Q
    |||||||| |||||||   || ||||||| ||||||||||  ||||||| ||||||||| ||| |||||||||||||||||| |||||||    
T  29403641 tattactctctccgtcctttaataaatgacttagttgactctgacacacataccaatgcgtatgttttatctttgatatcttcaattctc 29403730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 22020295 - 22020407
Alignment:
Q  156 taaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatatttt 255  Q
    |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| | |        |||| |||||||||||||||    
T  22020295 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaattatcaaaatttaatatttt 22020394  T
Q  256 agaaatattcatc 268  Q
    | ||||| |||||    
T  22020395 aaaaatactcatc 22020407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 18991932 - 18992034
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaatattttagaaatatt 264  Q
    |||||||||  ||||||||||||||||||||| |||||| ||||||||||| |||| || |||        |||| |||||||||||||||| |||||||    
T  18991932 tagttgactctgacacacgtaccaatgcatatgttttatttttgatatcttcaattttctact-aaaaaaattataaaaatttaatattttaaaaatatt 18992030  T
Q  265 catc 268  Q
    ||||    
T  18992031 catc 18992034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 19069029 - 19068951
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctt 215  Q
    ||||| |||||||  || ||| |||| |||||| ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  19069029 tactctctccgtccgattttagatgacttagttaactccgatacacgtaccaatacatatattttatctttgatatctt 19068951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 31854816 - 31854949
Alignment:
Q  135 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnn 234  Q
    ||||||||||||||| |  | |||||||   ||||||||  || |||| ||||||||||||| |||||||||||||||||| ||||||| | |           
T  31854816 attactccctccgtccctaaataaatgacccagttgactctgatacacataccaatgcatatgttttatctttgatatcttcaattctctattataaaaa 31854915  T
Q  235 nttatgaaaatttaatattttagaaatattcatc 268  Q
     |||| |||||||||||||||| ||||| |||||    
T  31854916 attataaaaatttaatattttaaaaatactcatc 31854949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 264
Target Start/End: Original strand, 17417538 - 17417651
Alignment:
Q  151 catattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaat 250  Q
    ||||||| ||||| |||||||||| || |||| |||| ||| |||| ||||| |||| |||||||||||| || | |        |||||||||||||||    
T  17417538 catattagatgatctagttgactttgatacacataccgatgtatattttttaactttaatatctttaattatctatttgaaaaaattatgaaaatttaat 17417637  T
Q  251 attttagaaatatt 264  Q
    |||||| |||||||    
T  17417638 attttaaaaatatt 17417651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 30237193 - 30237298
Alignment:
Q  165 tagttgacttcgacacacgtaccaatgcatat-attttatctttgatatctttaattctccact-nnnnnnnnttatgaaaatttaatattttagaaata 262  Q
    |||||||||  |||||||||||||||||||||  ||||||||||||||||||  |||||| |||         |||| |||||||||||||||| |||||    
T  30237193 tagttgactctgacacacgtaccaatgcatatgtttttatctttgatatcttcgattctctactaaaaaaaaattataaaaatttaatattttaaaaata 30237292  T
Q  263 ttcatc 268  Q
    ||||||    
T  30237293 ttcatc 30237298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 268
Target Start/End: Complemental strand, 38606 - 38490
Alignment:
Q  152 atattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnttatgaaaatttaata 251  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||| || |||         |||||||||||||||    
T  38606 atattagatgatttagttgacttcgacatacgtaccaatgcatatgttttatctttgatatcttcaattatctactaaaaaaaactatgaaaatttaata 38507  T
Q  252 ttttagaaatattcatc 268  Q
    ||||| |||||||||||    
T  38506 ttttaaaaatattcatc 38490  T

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Target: scaffold0051 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 268
Target Start/End: Complemental strand, 41480 - 41347
Alignment:
Q  135 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnn 234  Q
    ||||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||           
T  41480 attactccctccgtccctcaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaa 41381  T
Q  235 nttatgaaaatttaatattttagaaatattcatc 268  Q
     |||| || ||||||||||||| ||||| |||||    
T  41380 attataaatatttaatattttaaaaatactcatc 41347  T

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Target: scaffold0459 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 268
Target Start/End: Original strand, 12748 - 12883
Alignment:
Q  133 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnn 232  Q
    ||||||||||||||||| |  | ||| |||  |||||||||  ||||||| ||| ||||||||| |||||||||||||||||| ||||||| |||         
T  12748 ttattactccctccgtccctaaataagtgacctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctctactaaaaa 12847  T
Q  233 nnnttatgaaaatttaatattttagaaatattcatc 268  Q
       |||| |||||||||||||||| ||||| |||||    
T  12848 aaattataaaaatttaatattttaaaaatactcatc 12883  T

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Target: scaffold0366 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 268
Target Start/End: Original strand, 10389 - 10524
Alignment:
Q  133 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnn 232  Q
    ||||||||||||||||| |  | ||| |||  |||||||||  ||||||| ||| ||||||||| |||||||||||||||||| ||||||| |||         
T  10389 ttattactccctccgtccctaaataagtgacctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctctactaaaaa 10488  T
Q  233 nnnttatgaaaatttaatattttagaaatattcatc 268  Q
       |||| |||||||||||||||| ||||| |||||    
T  10489 aaattataaaaatttaatattttaaaaatactcatc 10524  T

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Target: scaffold0366; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 268
Target Start/End: Original strand, 14055 - 14190
Alignment:
Q  133 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnn 232  Q
    ||||||||||||||||| |  | ||| |||  |||||||||  || |||||||||||||||||| |||||||||||||||||| ||||||| |||         
T  14055 ttattactccctccgtccctaaataagtgacctagttgactctgatacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaa 14154  T
Q  233 nnnttatgaaaatttaatattttagaaatattcatc 268  Q
       |||| || ||||||||||||| ||||| |||||    
T  14155 aaattataaatatttaatattttaaaaatactcatc 14190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 44369 - 44238
Alignment:
Q  137 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaattctccactnnnnnnnnt 236  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||| | ||||||||||||| |||||||||||||||||| ||||||| |||        |    
T  44369 tactccctccgtccctaaataaatgacctagttgactctgacacgcataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaatt 44270  T
Q  237 tatgaaaatttaatattttagaaatattcatc 268  Q
    ||| |||||||||||||||| ||||| |||||    
T  44269 tataaaaatttaatattttaaaaatactcatc 44238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 117320 - 117404
Alignment:
Q  136 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatattttatctttgatatctttaatt 220  Q
    |||||||||||||| |  | |||||||| |||||||||  ||||||| || |||||||||| |||||||||| ||||||| ||||    
T  117320 ttactccctccgtccctaaataaatgatctagttgactctgacacacatatcaatgcatatgttttatctttaatatcttcaatt 117404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 145822 - 145756
Alignment:
Q  135 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcatatatttt 201  Q
    ||||||||||||||| ||| ||| ||||| |||||| ||  ||||||| ||||||||||||| ||||    
T  145822 attactccctccgtcccatgttagatgatctagttggctcagacacacataccaatgcatatttttt 145756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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