View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0889_low_16 (Length: 270)

Name: NF0889_low_16
Description: NF0889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0889_low_16
NF0889_low_16
[»] chr6 (17 HSPs)
chr6 (32-120)||(5863735-5863823)
chr6 (1-106)||(32853495-32853600)
chr6 (32-120)||(9458335-9458423)
chr6 (32-106)||(10188437-10188511)
chr6 (32-120)||(2366963-2367051)
chr6 (32-120)||(3484286-3484374)
chr6 (32-120)||(27534332-27534420)
chr6 (32-106)||(12141048-12141122)
chr6 (5-108)||(14032281-14032384)
chr6 (32-106)||(32052707-32052781)
chr6 (32-120)||(9442286-9442374)
chr6 (32-120)||(24225338-24225425)
chr6 (32-76)||(29200265-29200309)
chr6 (32-75)||(14505781-14505824)
chr6 (37-120)||(33061994-33062077)
chr6 (32-106)||(10142880-10142954)
chr6 (32-76)||(20611273-20611317)
[»] chr4 (31 HSPs)
chr4 (1-120)||(11027715-11027834)
chr4 (32-106)||(16217032-16217106)
chr4 (126-179)||(2929590-2929643)
chr4 (32-120)||(5902978-5903066)
chr4 (32-120)||(31918924-31919012)
chr4 (32-106)||(42299483-42299557)
chr4 (32-101)||(11172608-11172676)
chr4 (32-120)||(3737440-3737528)
chr4 (32-120)||(6382638-6382726)
chr4 (32-120)||(7608613-7608701)
chr4 (32-120)||(10286911-10286999)
chr4 (32-120)||(47550717-47550805)
chr4 (32-120)||(48459129-48459217)
chr4 (32-106)||(4766679-4766753)
chr4 (36-106)||(32596548-32596618)
chr4 (32-106)||(44317201-44317275)
chr4 (36-106)||(45275176-45275246)
chr4 (32-120)||(6482389-6482477)
chr4 (29-105)||(12505937-12506013)
chr4 (32-120)||(37348766-37348854)
chr4 (32-120)||(42774404-42774492)
chr4 (32-71)||(53906640-53906679)
chr4 (32-114)||(43892160-43892242)
chr4 (22-106)||(8844197-8844281)
chr4 (22-106)||(8857161-8857245)
chr4 (32-76)||(10574813-10574857)
chr4 (35-75)||(19534143-19534183)
chr4 (22-62)||(33915804-33915844)
chr4 (32-120)||(39046600-39046688)
chr4 (32-88)||(39375016-39375072)
chr4 (32-120)||(55826987-55827075)
[»] chr5 (24 HSPs)
chr5 (32-114)||(13402367-13402449)
chr5 (32-119)||(12447020-12447107)
chr5 (32-120)||(15889848-15889936)
chr5 (32-120)||(22695265-22695353)
chr5 (34-120)||(2680833-2680919)
chr5 (32-106)||(5909046-5909120)
chr5 (32-106)||(40517458-40517532)
chr5 (32-120)||(1218424-1218512)
chr5 (32-120)||(10822902-10822989)
chr5 (32-120)||(20973849-20973937)
chr5 (32-100)||(23045377-23045445)
chr5 (50-106)||(24207291-24207347)
chr5 (32-106)||(4920483-4920557)
chr5 (32-106)||(28045303-28045377)
chr5 (32-120)||(3565083-3565170)
chr5 (39-119)||(17853650-17853730)
chr5 (50-106)||(38972516-38972572)
chr5 (32-75)||(6093469-6093512)
chr5 (34-113)||(35311461-35311540)
chr5 (32-75)||(36579615-36579658)
chr5 (23-105)||(16366826-16366908)
chr5 (29-75)||(18206710-18206756)
chr5 (32-74)||(38006834-38006876)
chr5 (36-76)||(12774158-12774198)
[»] chr2 (26 HSPs)
chr2 (6-120)||(35248778-35248892)
chr2 (34-120)||(36128473-36128559)
chr2 (32-106)||(22900438-22900512)
chr2 (1-106)||(37473062-37473167)
chr2 (32-120)||(15546331-15546419)
chr2 (32-120)||(31942518-31942606)
chr2 (39-130)||(10212066-10212157)
chr2 (32-107)||(30846595-30846670)
chr2 (32-106)||(24414495-24414569)
chr2 (32-101)||(42576233-42576302)
chr2 (32-120)||(9632035-9632123)
chr2 (32-120)||(10920300-10920388)
chr2 (32-120)||(11009099-11009187)
chr2 (32-120)||(13830373-13830461)
chr2 (22-106)||(13954337-13954421)
chr2 (22-106)||(14095544-14095628)
chr2 (32-90)||(8916299-8916357)
chr2 (32-120)||(7315013-7315101)
chr2 (32-120)||(10208793-10208881)
chr2 (32-76)||(26755415-26755459)
chr2 (34-106)||(42798354-42798426)
chr2 (28-75)||(25210005-25210052)
chr2 (34-119)||(16227055-16227140)
chr2 (32-76)||(6164873-6164917)
chr2 (34-114)||(14331186-14331266)
chr2 (32-120)||(43371209-43371297)
[»] chr1 (29 HSPs)
chr1 (32-106)||(34610725-34610799)
chr1 (32-116)||(24237124-24237208)
chr1 (32-120)||(36187585-36187673)
chr1 (32-121)||(51421531-51421620)
chr1 (32-120)||(20774269-20774357)
chr1 (32-120)||(34673622-34673710)
chr1 (32-120)||(40087821-40087909)
chr1 (36-120)||(49251099-49251183)
chr1 (32-120)||(13390092-13390180)
chr1 (32-120)||(18354434-18354522)
chr1 (32-120)||(23493688-23493776)
chr1 (32-120)||(28297570-28297658)
chr1 (32-75)||(19572858-19572901)
chr1 (32-74)||(32594579-32594621)
chr1 (32-106)||(42439998-42440072)
chr1 (32-120)||(44792642-44792730)
chr1 (32-120)||(50427017-50427105)
chr1 (29-76)||(12719141-12719188)
chr1 (32-106)||(5180702-5180776)
chr1 (32-106)||(10778978-10779051)
chr1 (53-119)||(14892344-14892410)
chr1 (32-106)||(19892602-19892676)
chr1 (32-106)||(23966509-23966583)
chr1 (23-104)||(16903157-16903238)
chr1 (32-121)||(29871647-29871736)
chr1 (24-92)||(5293809-5293877)
chr1 (32-120)||(24710495-24710583)
chr1 (32-76)||(35077567-35077611)
chr1 (36-120)||(38686290-38686374)
[»] scaffold0036 (1 HSPs)
scaffold0036 (32-120)||(33032-33120)
[»] chr8 (21 HSPs)
chr8 (32-120)||(24927586-24927674)
chr8 (32-120)||(34301517-34301605)
chr8 (32-106)||(2076199-2076273)
chr8 (32-120)||(32302697-32302785)
chr8 (32-106)||(24870386-24870460)
chr8 (32-121)||(9642730-9642819)
chr8 (32-120)||(5858820-5858908)
chr8 (29-120)||(45235707-45235798)
chr8 (32-106)||(15068971-15069045)
chr8 (7-104)||(1063162-1063259)
chr8 (32-100)||(2190245-2190313)
chr8 (32-120)||(27058693-27058781)
chr8 (1-120)||(6388897-6389016)
chr8 (32-106)||(14185995-14186069)
chr8 (32-74)||(28977477-28977519)
chr8 (36-106)||(33633349-33633419)
chr8 (32-106)||(39445925-39445999)
chr8 (36-121)||(4231086-4231171)
chr8 (25-106)||(9434682-9434763)
chr8 (32-120)||(17220354-17220442)
chr8 (32-72)||(28345116-28345156)
[»] chr7 (30 HSPs)
chr7 (32-120)||(17851507-17851595)
chr7 (32-106)||(16865825-16865899)
chr7 (32-120)||(21702321-21702409)
chr7 (32-108)||(37578917-37578993)
chr7 (32-120)||(42908414-42908502)
chr7 (32-106)||(10072144-10072218)
chr7 (32-106)||(30650286-30650360)
chr7 (32-120)||(10996210-10996298)
chr7 (32-120)||(25905270-25905358)
chr7 (32-120)||(33840716-33840804)
chr7 (23-75)||(35074155-35074207)
chr7 (32-120)||(37196351-37196439)
chr7 (34-76)||(22962265-22962307)
chr7 (32-130)||(27062758-27062856)
chr7 (32-114)||(41103291-41103373)
chr7 (32-120)||(3227904-3227992)
chr7 (22-106)||(23534017-23534101)
chr7 (34-106)||(24425103-24425175)
chr7 (32-120)||(38152542-38152630)
chr7 (29-72)||(3920228-3920271)
chr7 (32-75)||(18826233-18826276)
chr7 (36-75)||(25980291-25980330)
chr7 (32-75)||(38140153-38140196)
chr7 (39-106)||(39316650-39316717)
chr7 (32-106)||(5567504-5567578)
chr7 (32-106)||(45886128-45886202)
chr7 (32-121)||(7779648-7779737)
chr7 (1-106)||(8906943-8907048)
chr7 (34-75)||(27062649-27062690)
chr7 (32-106)||(39456342-39456413)
[»] chr3 (29 HSPs)
chr3 (32-99)||(27252171-27252238)
chr3 (1-106)||(39728333-39728438)
chr3 (32-120)||(44638912-44639000)
chr3 (32-106)||(44107162-44107236)
chr3 (32-106)||(44252392-44252466)
chr3 (32-120)||(6738735-6738823)
chr3 (32-120)||(7470141-7470228)
chr3 (32-120)||(23547341-23547429)
chr3 (32-120)||(30616667-30616755)
chr3 (32-120)||(34154053-34154141)
chr3 (32-120)||(39655626-39655714)
chr3 (32-114)||(34025602-34025684)
chr3 (1-75)||(44179009-44179083)
chr3 (32-106)||(49025333-49025407)
chr3 (32-106)||(55439042-55439116)
chr3 (32-101)||(20716105-20716174)
chr3 (41-106)||(44162435-44162500)
chr3 (32-120)||(29283972-29284060)
chr3 (32-75)||(42758082-42758125)
chr3 (32-75)||(52572296-52572339)
chr3 (32-74)||(1772779-1772821)
chr3 (32-114)||(4557668-4557750)
chr3 (40-106)||(10043618-10043684)
chr3 (32-106)||(22536207-22536281)
chr3 (36-106)||(30905191-30905261)
chr3 (32-106)||(31127158-31127232)
chr3 (52-106)||(43582228-43582282)
chr3 (32-106)||(49579715-49579789)
chr3 (32-76)||(40796523-40796566)
[»] scaffold1630 (1 HSPs)
scaffold1630 (1-121)||(1259-1379)
[»] scaffold0014 (1 HSPs)
scaffold0014 (32-120)||(14507-14595)
[»] scaffold0189 (1 HSPs)
scaffold0189 (32-119)||(3896-3983)
[»] scaffold0015 (1 HSPs)
scaffold0015 (32-106)||(56282-56356)
[»] scaffold0157 (1 HSPs)
scaffold0157 (29-105)||(14464-14540)
[»] scaffold0244 (1 HSPs)
scaffold0244 (32-75)||(5006-5049)
[»] scaffold0095 (1 HSPs)
scaffold0095 (32-106)||(32887-32961)
[»] scaffold0007 (1 HSPs)
scaffold0007 (32-120)||(199156-199244)


Alignment Details
Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 5863735 - 5863823
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  ||| || |||||||| ||||||||||||| | ||||| |||||    
T  5863735 tctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcaggtatggggacggggaaggtaaaacccgtccccacccc 5863823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 32853600 - 32853495
Alignment:
Q  1 aacctgtcggggatggagacaagatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaag 100  Q
    |||| ||||||||||| ||  |||||  || |||||||||||||||| ||||||||||||||  |||||||||||  |||  | ||||||||||||||||    
T  32853600 aacccgtcggggatggggatgagattcaatttctcatccccgttgggtatgggtagggtaactggtaagtatatgataatcgggtatggggatggggaag 32853501  T
Q  101 gtaaaa 106  Q
    ||||||    
T  32853500 gtaaaa 32853495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 9458423 - 9458335
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| | || |  |||||||||||||||| |||| | ||||| |||||    
T  9458423 tctcatccccgttgggtatgggtagggtaacgggtaagtatatgggagtaggggatggggatggggaaggaaaaacccgtccccacccc 9458335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 10188437 - 10188511
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| ||||||||||||||  |||||||||||  |||  | ||||||||||||||||||||||    
T  10188437 tctcatccccgttgggtatgggtagggtaacaggtaagtatatgagaatcgggtatggggatggggaaggtaaaa 10188511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 2367051 - 2366963
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||| ||||||||||  |||||||||||  |||  |||||||||||| ||||||||||| | ||||| |||||    
T  2367051 tctcatccccgttgggtatgagtagggtaacatgtaagtatatgagaatcggatatggggatgaggaaggtaaaacccgtccccacccc 2366963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 3484286 - 3484374
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  |||  | ||| |||| ||||||||||||| | ||||| |||||    
T  3484286 tctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatagggacggggaaggtaaaacccgtccccacccc 3484374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 27534420 - 27534332
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| |||||||||||||||  ||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  27534420 tctcatccccgttgggtatgggtagggtaacggttaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 27534332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 12141122 - 12141048
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| |||||||| |||||| |||||||||||  |||  | |||||||| |||||||||||||    
T  12141122 tctcatccccgttgggtatgggtagagtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaa 12141048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 14032384 - 14032281
Alignment:
Q  5 tgtcggggatggagacaagatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaa 104  Q
    |||||||||||| || ||||||  || | |||||||||||||| || |||||||||||| ||||||||||   |||  | |||||||| |||||| ||||    
T  14032384 tgtcggggatggggataagattcaatttttcatccccgttgggtataggtagggtaacgggtaagtatattaaaatcgggtatggggacggggaatgtaa 14032285  T
Q  105 aatc 108  Q
    ||||    
T  14032284 aatc 14032281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 32052781 - 32052707
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||  ||||||||||||||| |||||||||||  |||  | |||| ||| |||||||||||||    
T  32052781 tctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatgaggacggggaaggtaaaa 32052707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 9442374 - 9442286
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||  ||||||| ||||||| |||||||||||  |||  | ||||| || ||||||||||||| | ||||| |||||    
T  9442374 tctcatccccgttggatatgggtaaggtaacgggtaagtatatgagaatcgggtatggagacggggaaggtaaaacccgtccccacccc 9442286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 24225425 - 24225338
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||||| |||||||  |||||||||||||||||||||||||||  |||  | ||||||||  |||||||||||| | ||||| |||||    
T  24225425 tctcatcaccgttggatatgggtagggtaacgagtaagtatatgagaatcgggtatgggga-cgggaaggtaaaacccgtccccacccc 24225338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 29200265 - 29200309
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatgg 76  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||||    
T  29200265 tctcatccccgttggtcatgggttgggtaacgggtaagtatatgg 29200309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 14505824 - 14505781
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    |||||||||||||||  ||||||||||||||| |||||||||||    
T  14505824 tctcatccccgttggatatgggtagggtaacgggtaagtatatg 14505781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 33062077 - 33061994
Alignment:
Q  37 tccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||| ||||| ||||||||||||||| |||||||||||  |||  | |||||||| | ||||||||||||   ||||||||||    
T  33062077 tccccattgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacgaggaaggtaaaattcatccctacccc 33061994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 10142880 - 10142954
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||| | ||||||||||||||| ||||||||| |  |||  |||||| | | |||||||||||||    
T  10142880 tctcatccccgttgagtatgggtagggtaacgggtaagtatacgagaatcggatatgagaacggggaaggtaaaa 10142954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 20611273 - 20611317
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatgg 76  Q
    |||||||||||||||| ||||||| ||||||  ||||||||||||    
T  20611273 tctcatccccgttgggtatgggtatggtaacaggtaagtatatgg 20611317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 11027834 - 11027715
Alignment:
Q  1 aacctgtcggggatggagacaagatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaag 100  Q
    ||||||||||||| || ||  |||||  || |||||||||||| ||| |||||||||||||||||||||||||||  ||| || |||| ||| |||||||    
T  11027834 aacctgtcggggacggggatgagattcaatttctcatccccgtagggtatgggtagggtaacgagtaagtatatgagaatcaggtatgaggacggggaag 11027735  T
Q  101 gtaaaatctgtccctacccc 120  Q
    |||||| | ||||| |||||    
T  11027734 gtaaaacccgtccccacccc 11027715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 16217032 - 16217106
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  |||  |||||||||| |||||||||||||    
T  16217032 tctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcggatatggggacggggaaggtaaaa 16217106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 2929590 - 2929643
Alignment:
Q  126 catgcttaattatgtgcttgatgagatcaataagagatatatgatcgagattat 179  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  2929590 catgcttaattatgtgcttgatgagatcaataagagacatatgattgtgattat 2929643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 5902978 - 5903066
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||| ||||||  ||||||||||||||| |||||||||||  |||  | |||||||||||||||||||||| | ||||| |||||    
T  5902978 tctcatcctcgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatggggatggggaaggtaaaacccgtccccacccc 5903066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 31918924 - 31919012
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| |||| |||||||||| |||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  31918924 tctcatccccgttgggtatggatagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 31919012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 42299557 - 42299483
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||||||||||| || |||||||||||||||||||||||||||  |||  | |||||||| |||||| ||||||    
T  42299557 tctcatccccgtttggtatgggtagggtaacgagtaagtatatgagaatcgggtatggggacggggaatgtaaaa 42299483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 11172676 - 11172608
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaagg 101  Q
    |||||||||||||||  |||||||||||||| ||||||||||||| | ||||  ||||||||||||||||    
T  11172676 tctcatccccgttggatatgggtagggtaacaagtaagtatatggaagtaag-gatggggatggggaagg 11172608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 3737528 - 3737440
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||| |||| || ||||||||||||||| |||| ||||||  |||| | ||||||||||| |||||||||| | ||||| |||||    
T  3737528 tctcatcctcgttaggtatgggtagggtaacgggtaaatatatgagaatatggtatggggatggagaaggtaaaacccgtccccacccc 3737440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 6382638 - 6382726
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||  ||||||||||||||| |||||||||||  |||  | |||||||  ||||||||||||| | ||||| |||||    
T  6382638 tctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatgggggcggggaaggtaaaaccggtccccacccc 6382726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 7608701 - 7608613
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||  ||||||||||||||  |||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  7608701 tctcatccccgttggatatgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 7608613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 10286999 - 10286911
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| |||| |||||||||| ||||||||||   |||| | |||||||| |||| |||||||| | ||||| |||||    
T  10286999 tctcatccccgttgggtatggatagggtaacgggtaagtatattagaatagggtatggggacgggggaggtaaaacccgtccccacccc 10286911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 47550717 - 47550805
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| |||| |||||||||| ||||||||| |  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  47550717 tctcatccccgttgggtatggatagggtaacgggtaagtatacgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 47550805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 48459217 - 48459129
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||| | ||| ||||||||||| |||||||||||  |||  | ||||||||||| |||||||||| | ||||| |||||    
T  48459217 tctcatccccgttgagtatgagtagggtaacgggtaagtatatgagaatcgggtatggggatggagaaggtaaaacccgtccccacccc 48459129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 4766679 - 4766753
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||||| |||||||| |||| |||||||||  |||||||||||  |||  |||||||||| |||||||||||||    
T  4766679 tctcatctccgttgggtatggatagggtaacaggtaagtatatgagaatcggatatggggacggggaaggtaaaa 4766753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 32596548 - 32596618
Alignment:
Q  36 atccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||||||||   |||||||||||||| ||||||||||||  ||| ||||||||||| || ||||||||||    
T  32596548 atccccgttgaatatgggtagggtaacaagtaagtatatgagaattagatatggggacggagaaggtaaaa 32596618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 44317275 - 44317201
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||| | ||||||||||||||  |||||||||||  |||  | |||||||| |||||||||||||    
T  44317275 tctcatccccgttgagtatgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaa 44317201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 45275246 - 45275176
Alignment:
Q  36 atccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||| ||||||| ||||||||||||||   ||||||||||| |||  || |||||||||||||||||||||    
T  45275246 atcctcgttgggtatgggtagggtaacatataagtatatgggaatcggagatggggatggggaaggtaaaa 45275176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 6482389 - 6482477
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||  ||||||||||||||| |||||||||||  |||  | |||||| | |||||| |||||| | ||||| |||||    
T  6482389 tctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatgggaacggggaatgtaaaacccgtccccacccc 6482477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 12505937 - 12506013
Alignment:
Q  29 atatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaa 105  Q
    |||||||||||| ||||| ||||||||||||||| | ||||||| | | | || |||||| ||||||| ||||||||    
T  12505937 atatctcatccctgttggacatgggtagggtaacaaataagtattttggagtaggatatgaggatgggaaaggtaaa 12506013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 37348854 - 37348766
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||||||||||||||  ||||||||| |  |||  | |||||||| || ||| |||||| | |||||||||||    
T  37348854 tctcatccccgttgggtatgggtagggtaacaggtaagtataagagaatcgggtatggggacggagaatgtaaaacccgtccctacccc 37348766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 42774492 - 42774404
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||| ||||| ||||||||| ||||   ||||||||||  |||  |||||||||| | ||||||||||| | |||||||||||    
T  42774492 tctcatccccattgggtatgggtaggataacatataagtatatgagaattggatatggggacgtggaaggtaaaacccgtccctacccc 42774404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 53906640 - 53906679
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagta 71  Q
    |||||||||||||||| ||||||||||||||| |||||||    
T  53906640 tctcatccccgttgggtatgggtagggtaacgggtaagta 53906679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 43892242 - 43892160
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccc 114  Q
    |||||||||||||||  ||||||| ||||| | |||||||||||  |||  | ||||| || ||||||||||||||| |||||    
T  43892242 tctcatccccgttggatatgggtaaggtaatgggtaagtatatgagaattgggtatggagacggggaaggtaaaatccgtccc 43892160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 8844197 - 8844281
Alignment:
Q  22 agatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||||||| ||||||||||| |||  | || |||||||||   ||||||||||| | || | |||||||| |||||||||||||    
T  8844197 agatttgatttctcatccccgctggctacggatagggtaactgataagtatatgggattagggtatggggacggggaaggtaaaa 8844281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 8857161 - 8857245
Alignment:
Q  22 agatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||||||| ||||||||||| |||  | || |||||||||   ||||||||||| | || | |||||||| |||||||||||||    
T  8857161 agatttgatttctcatccccgctggctacggatagggtaactgataagtatatgggattagggtatggggacggggaaggtaaaa 8857245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 10574813 - 10574857
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatgg 76  Q
    |||||| ||||||||| |||||| |||||||| ||||||||||||    
T  10574813 tctcattcccgttgggtatgggtggggtaacgggtaagtatatgg 10574857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 19534183 - 19534143
Alignment:
Q  35 catccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    ||||||||||||  ||||||||||||| |||||||||||||    
T  19534183 catccccgttggatatgggtagggtaatgagtaagtatatg 19534143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 33915844 - 33915804
Alignment:
Q  22 agatttgatatctcatccccgttgggcatgggtagggtaac 62  Q
    ||||||||| |||||||||||||||| |||||||| |||||    
T  33915844 agatttgatttctcatccccgttgggtatgggtagagtaac 33915804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 39046688 - 39046600
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||  || |||||| ||||||||||||||||   |||  | |||||||| ||| ||||||||| | ||||| |||||    
T  39046688 tctcatccccgttggatataggtaggataacgagtaagtatataagaatcgggtatggggacgggaaaggtaaaacccgtccccacccc 39046600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 39375072 - 39375016
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatg 88  Q
    |||||||||||||||  || |||||||||||| |||||||||||  ||| |||||||    
T  39375072 tctcatccccgttggatatcggtagggtaacgggtaagtatatgagaatcagatatg 39375016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 55826987 - 55827075
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||| ||||  ||||||||||||||   ||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  55826987 tctcatccccattggatatgggtagggtaacagataagtatatgagaatccggtatggggacggggaaggtaaaacccgtccccacccc 55827075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 7e-18; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 13402367 - 13402449
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccc 114  Q
    |||||||||||||||| || |||||||||||| ||||||||||   ||| ||||||||||| ||| |||||||||||||||||    
T  13402367 tctcatccccgttgggtataggtagggtaacgggtaagtatataagaatcagatatggggacgggaaaggtaaaatctgtccc 13402449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 12447107 - 12447020
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctaccc 119  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||  ||| ||||||||||| |||||| |||||| | ||||| ||||    
T  12447107 tctcatccccgttgggtatgggtaaggtaacgggtaagtatatgtgaatcagatatggggacggggaatgtaaaacccgtccccaccc 12447020  T

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Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 15889936 - 15889848
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||||||||||| || ||||||||||||||  |||||||||||  |||  | |||||||||||||||||||||| | ||||| |||||    
T  15889936 tctcatccccgttaggtatgggtagggtaacaggtaagtatatgagaatcggttatggggatggggaaggtaaaacccgtccccacccc 15889848  T

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Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 22695265 - 22695353
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||| ||||| |||||||||||||||||||||||||||  |||  | ||| |||| ||||||||||||| | ||||| |||||    
T  22695265 tctcatccccattgggtatgggtagggtaacgagtaagtatatgagaattgggtatagggacggggaaggtaaaacccgtccccacccc 22695353  T

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Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 2680919 - 2680833
Alignment:
Q  34 tcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||| |||||||  ||||||||||||||| ||| |||||||| |||| || |||||||||||||||| |||| | ||||| |||||    
T  2680919 tcatctccgttggatatgggtagggtaacgggtaggtatatgggaataggagatggggatggggaaggcaaaacccgtccccacccc 2680833  T

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Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 5909046 - 5909120
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| | ||||||||||||| |||||||||||  |||  | |||||||| |||||||||||||    
T  5909046 tctcatccccgttgggtacgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaa 5909120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 40517532 - 40517458
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| ||||||||||||||  |||||||||||  |||  | |||||||| |||||||||||||    
T  40517532 tctcatccccgttgggtatgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaa 40517458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 1218512 - 1218424
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||| ||| ||||||| |||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  1218512 tctcatccccgttgggtatgagtaaggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 1218424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 10822902 - 10822989
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||| ||||||| ||| ||| ||||||| |||||||||||  |||| ||||||||||||||| |||||||| | ||||| |||||    
T  10822902 tctcatcctcgttgggtatgagtatggtaacgggtaagtatatgataataggatatggggatgggg-aggtaaaaaccgtccccacccc 10822989  T

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Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 20973849 - 20973937
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||  ||||||||||||||  ||||||||||   ||| || |||||||| ||||||||||||| | ||||| |||||    
T  20973849 tctcatccccgttggatatgggtagggtaacaggtaagtatataagaatcagttatggggacggggaaggtaaaacccgtccccacccc 20973937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 23045377 - 23045445
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaag 100  Q
    |||||||||||||||  ||||||||||||||| |||||||||||| | || |  |||||||||||||||    
T  23045377 tctcatccccgttggatatgggtagggtaacgggtaagtatatgggagtaggggatggggatggggaag 23045445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 24207347 - 24207291
Alignment:
Q  50 tgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||||||||||||||||||||||||  | || |||||||||||| |||||||||||    
T  24207347 tgggtagggtaacgagtaagtatatgagagtaggatatggggatgaggaaggtaaaa 24207291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 4920557 - 4920483
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||| ||||||| ||||||||||||||| |||||||||||  |||  | ||| ||||| ||||||||||||    
T  4920557 tctcatcctcgttgggtatgggtagggtaacgggtaagtatatgataatcgggtatagggatagggaaggtaaaa 4920483  T

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Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 28045377 - 28045303
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||| | ||||||||||||||  |||||||||||  |||   ||||||||||||| |||||||||    
T  28045377 tctcatccccgttgagtatgggtagggtaacaggtaagtatatgagaatcgaatatggggatgggaaaggtaaaa 28045303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 3565083 - 3565170
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||  ||||||||||||||| |||||||||||  |||  | ||||||||  |||||||||||| | ||||| |||||    
T  3565083 tctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatgggga-cgggaaggtaaaacccgtccccacccc 3565170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 17853650 - 17853730
Alignment:
Q  39 cccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctaccc 119  Q
    ||||||||| ||||||||||||||  |||||||||||  |||  | |||||||| ||||||||||||| | ||||| ||||    
T  17853650 cccgttgggtatgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccc 17853730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 38972572 - 38972516
Alignment:
Q  50 tgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||||| |||||||| | || | |||||||| |||||||||||||    
T  38972572 tgggtagggtaacgagtatgtatatgggagtagggtatggggacggggaaggtaaaa 38972516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 6093469 - 6093512
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    |||||||||||||||  |||||||||||||| ||||||||||||    
T  6093469 tctcatccccgttggatatgggtagggtaacaagtaagtatatg 6093512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 35311540 - 35311461
Alignment:
Q  34 tcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtcc 113  Q
    |||||||||||||  ||  ||||| ||||| |||||||||||  |||  ||||||||||||| |||||||||||| ||||    
T  35311540 tcatccccgttggatatatgtaggataacgggtaagtatatgagaatcggatatggggatggagaaggtaaaatccgtcc 35311461  T

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Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 36579615 - 36579658
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    |||||||||||||||| ||||||||||||||  |||||||||||    
T  36579615 tctcatccccgttgggtatgggtagggtaacatgtaagtatatg 36579658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 16366826 - 16366908
Alignment:
Q  23 gatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaa 105  Q
    |||| ||| ||| |||||||||||  ||||||||||||  | |||||||||||| | || |||||||||| | ||||||||||    
T  16366826 gattcgatttcttatccccgttggatatgggtagggtagtgggtaagtatatggtagtaggatatggggacgaggaaggtaaa 16366908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 18206756 - 18206710
Alignment:
Q  29 atatctcatccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    ||||||||||||||||||| |||||||| |||||  |||||||||||    
T  18206756 atatctcatccccgttgggtatgggtagagtaacaggtaagtatatg 18206710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 38006834 - 38006876
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatat 74  Q
    |||||||||||||||| |||||||||||||||  |||||||||    
T  38006834 tctcatccccgttgggtatgggtagggtaacggataagtatat 38006876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 12774158 - 12774198
Alignment:
Q  36 atccccgttgggcatgggtagggtaacgagtaagtatatgg 76  Q
    |||||||| ||| ||||||||||||||| ||||||||||||    
T  12774158 atccccgtcgggtatgggtagggtaacgggtaagtatatgg 12774198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 120
Target Start/End: Original strand, 35248778 - 35248892
Alignment:
Q  6 gtcggggatggagacaagatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaa 105  Q
    |||||||| |||||  ||||| ||| ||| |||||||||||  ||||||||||||| | |||||||| ||| | |||| |||||||| ||||||||||||    
T  35248778 gtcggggacggagatgagattcgatttcttatccccgttggatatgggtagggtaatgggtaagtatttgggagtaaggtatggggacggggaaggtaaa 35248877  T
Q  106 atctgtccctacccc 120  Q
    ||| ||||| |||||    
T  35248878 atccgtccccacccc 35248892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 36128473 - 36128559
Alignment:
Q  34 tcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||| ||||||||||||||| |||||||||||  |||  |||||||||| ||||||||||||| | ||||| |||||    
T  36128473 tcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcggatatggggacggggaaggtaaaacccgtccccacccc 36128559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 22900512 - 22900438
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  |||| | |||| |||| ||||||||||||    
T  22900512 tctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatagggtatgaggatagggaaggtaaaa 22900438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 37473062 - 37473167
Alignment:
Q  1 aacctgtcggggatggagacaagatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaag 100  Q
    |||| ||||||||||| ||  |||||  || |||||||||||||||| ||||||||||||||  |||||||||||  ||| || ||| |||| |||||||    
T  37473062 aacccgtcggggatggggatgagattcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatatgaaaatcaggtatagggacggggaag 37473161  T
Q  101 gtaaaa 106  Q
    ||||||    
T  37473162 gtaaaa 37473167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 15546419 - 15546331
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||| ||||  || |||||||||||| |||||||||||  |||| | |||||||||||||||||||||| | ||||| |||||    
T  15546419 tctcatccccattggatataggtagggtaacgggtaagtatatgagaatagggtatggggatggggaaggtaaaacccgtccccacccc 15546331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 31942518 - 31942606
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  |||  | |||||||| |||||| |||||| | ||||| |||||    
T  31942518 tctcatccccgttgggtatgggtagggtaacgggtaagtatatgataatcgggtatggggacggggaatgtaaaacccgtccccacccc 31942606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 10212157 - 10212066
Alignment:
Q  39 cccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctaccccattgacatgc 130  Q
    ||||||||| ||||||||||||||| |||||||||||  |||  |  ||||||||||||||||||||| | |||||  |||||||| |||||    
T  10212157 cccgttgggtatgggtagggtaacgggtaagtatatgagaatcggggatggggatggggaaggtaaaacccgtccccgccccattgccatgc 10212066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 30846670 - 30846595
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaat 107  Q
    |||||||||||||||| |||||||||||||||  ||||||||||  |||  | |||||||| ||||||||||||||    
T  30846670 tctcatccccgttgggtatgggtagggtaacggctaagtatatgagaatcgggtatggggacggggaaggtaaaat 30846595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 24414495 - 24414569
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||  |||| | |||| ||| |||||||||||||    
T  24414495 tctcatccccgttgggtatgggtagggtaacgggtaagtgtatgagaatagggtatgtggacggggaaggtaaaa 24414569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 42576302 - 42576233
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaagg 101  Q
    |||||||||||||||  ||||||||||||||| |||||||||||| | || |  ||||||||||||||||    
T  42576302 tctcatccccgttggatatgggtagggtaacgggtaagtatatggaagtaggggatggggatggggaagg 42576233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 9632123 - 9632035
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||||||||||||||| ||||||||||   |||  | |||||| | ||||||||||||| | ||||| |||||    
T  9632123 tctcatccccgttgggtatgggtagggtaacgggtaagtatataagaatcgggtatgggaacggggaaggtaaaacccgtccccacccc 9632035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 10920388 - 10920300
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||  ||||||||||||||  |||||||||||  |||| | ||||| |||||||||| ||||| | ||||| |||||    
T  10920388 tctcatccccgttggatatgggtagggtaacaggtaagtatatgagaatagggtatggagatggggaagataaaacccgtccccacccc 10920300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 11009099 - 11009187
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||||||| |||||| ||||||||||||||| |||||||||||  |||  | |||||||| ||||||| ||||| | ||||| |||||    
T  11009099 tctcatccctgttgggtatgggtagggtaacgtgtaagtatatgagaatcgggtatggggacggggaagataaaacccgtccccacccc 11009187  T

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Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 13830461 - 13830373
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| |||||||||||||   |||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  13830461 tctcatccccgttgggtatgggtagggtaataggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 13830373  T

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Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 13954421 - 13954337
Alignment:
Q  22 agatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||| ||| ||| ||||||| |||| ||||||||| |||||||||||||||||  | || |||||||||| | |||||||||||    
T  13954421 agattcgatttcttatccccgctgggtatgggtaggataacgagtaagtatatgagagtatgatatggggacgaggaaggtaaaa 13954337  T

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Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 14095628 - 14095544
Alignment:
Q  22 agatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||| ||| ||| ||||||| |||| ||||||||| |||||||||||||||||  | || |||||||||| | |||||||||||    
T  14095628 agattcgatttcttatccccgctgggtatgggtaggataacgagtaagtatatgagagtatgatatggggacgaggaaggtaaaa 14095544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 8916299 - 8916357
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggg 90  Q
    |||||||| ||||||| ||||||||||||||| |||||||||||  ||| |||||||||    
T  8916299 tctcatcctcgttgggtatgggtagggtaacgggtaagtatatgagaatcagatatggg 8916357  T

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Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 7315013 - 7315101
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||||||||| |||  ||||| ||||||||| |||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  7315013 tctcatccccgctggatatgggcagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 7315101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 10208793 - 10208881
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||  ||||||||||||||| |||||||||||  |||  | |||| | | ||||||||||||| | ||||| |||||    
T  10208793 tctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatgagaacggggaaggtaaaacccgtccccacccc 10208881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 26755459 - 26755415
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatgg 76  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||    
T  26755459 tctcatccccgttgggtatgggtagggtaatgggtaagtatatgg 26755415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 42798354 - 42798426
Alignment:
Q  34 tcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||| ||| ||||||||||   ||||||||||  ||| | ||||||||||| |||||||||||    
T  42798354 tcatccccgttgggtatgtgtagggtaacagataagtatatgagaatcatatatggggatgaggaaggtaaaa 42798426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 25210052 - 25210005
Alignment:
Q  28 gatatctcatccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    ||||||||||||||| |||| |||||| |||||||| |||||||||||    
T  25210052 gatatctcatccccgctgggtatgggttgggtaacgggtaagtatatg 25210005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 16227055 - 16227140
Alignment:
Q  34 tcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctaccc 119  Q
    |||||||||||||| ||| ||||||||||  |||||||||||  |||  | |||||||| |||||| |||||| | ||||| ||||    
T  16227055 tcatccccgttgggtatgagtagggtaacatgtaagtatatgagaatcgggtatggggacggggaatgtaaaacccgtccccaccc 16227140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 6164873 - 6164917
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatgg 76  Q
    |||||||||||||||  ||||||||||| ||| ||||||||||||    
T  6164873 tctcatccccgttggatatgggtagggttacgggtaagtatatgg 6164917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 14331266 - 14331186
Alignment:
Q  34 tcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccc 114  Q
    |||| |||||| || |||||||| |||||||| || ||||||| | || |  |||||||||||||||| |||||| |||||    
T  14331266 tcattcccgttaggtatgggtagtgtaacgaggaaatatatgggagtaggggatggggatggggaaggcaaaatccgtccc 14331186  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 43371297 - 43371209
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||| || |||||  ||| |||||||||||  ||||||||||| | ||||  |||||||||||||||| |||| | ||||| |||||    
T  43371297 tctcatgcctgttggatatgagtagggtaacggataagtatatgggagtaagggatggggatggggaaggcaaaacccgtccccacccc 43371209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 34610799 - 34610725
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||  | |||||||| |||||||||||||    
T  34610799 tctcatccccgttgggtatgggtagggtaacgagtaagtatatgagaatcgggtatggggacggggaaggtaaaa 34610725  T

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Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 24237124 - 24237208
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtcccta 116  Q
    |||||||||||||||| |||||| ||||||||||||||||||||  |||  | |||||||| | ||||||||||||| |||||||    
T  24237124 tctcatccccgttgggtatgggtggggtaacgagtaagtatatgagaatcgggtatggggacgaggaaggtaaaatccgtcccta 24237208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 36187585 - 36187673
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||||||||||||||| ||||||||| |  |||  |||||||||| ||||||||||||| | ||||| |||||    
T  36187585 tctcatccccgttgggtatgggtagggtaacgggtaagtatacgagaatcggatatggggacggggaaggtaaaacccgtccccacccc 36187673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 51421620 - 51421531
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccca 121  Q
    |||||||||||||||  ||| ||||||||||| |||||||||||  |||  | |||||||||| ||||||||||||| ||||| ||||||    
T  51421620 tctcatccccgttggatatgagtagggtaacgggtaagtatatgagaatcgggtatggggatgaggaaggtaaaatccgtccccacccca 51421531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 20774357 - 20774269
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||  ||||||||||||||| |||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  20774357 tctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 20774269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 34673622 - 34673710
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||  ||||||||||||||| |||||||||||  |||  |||||||||||| |||| |||||| | ||||| |||||    
T  34673622 tctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcggatatggggatgaggaatgtaaaacccgtccccacccc 34673710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 40087821 - 40087909
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||| ||||| ||||||||||||||| |||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  40087821 tctcatccccattgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 40087909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 49251099 - 49251183
Alignment:
Q  36 atccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||| |||||||||||||| |||| |||||||  |||  |||||||||| ||||||||||||| | ||||| |||||    
T  49251099 atccccgttgggtatgggtagggtaaccagtatgtatatgagaatcggatatggggacggggaaggtaaaacccgtccccacccc 49251183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 13390180 - 13390092
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||  |||||||||||||||  ||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  13390180 tctcatccccgttggatatgggtagggtaacggttaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 13390092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 18354434 - 18354522
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||  ||||||||||||||| |||||||||||  |||  ||||| | || ||||||||||||| | ||||| |||||    
T  18354434 tctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcggatatagagacggggaaggtaaaacccgtccccacccc 18354522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 23493688 - 23493776
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||||||||||||   ||||||||||||||| |||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  23493688 tctcatccccgttgaatatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 23493776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 28297658 - 28297570
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||| ||||||||| |||||| |||||||| |||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  28297658 tctcattcccgttgggtatgggtcgggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 28297570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 19572858 - 19572901
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  19572858 tctcatccccgttgggtatgggtagggtaacgggtaagtatatg 19572901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 32594621 - 32594579
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatat 74  Q
    |||||||||||||||| ||||||||||||||| ||||||||||    
T  32594621 tctcatccccgttgggtatgggtagggtaacgggtaagtatat 32594579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 42439998 - 42440072
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||  ||||||||||||||| |||||||||||  ||| || ||||||   |||||||||||||    
T  42439998 tctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcaggtatgggagcggggaaggtaaaa 42440072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 44792730 - 44792642
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||||||||||||   ||||||||||||||| |||||||||||  |||  | |||||||| |||||| |||||| | ||||| |||||    
T  44792730 tctcatccccgttgaatatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaatgtaaaacccgtccccacccc 44792642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 50427017 - 50427105
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||| |||||   ||||||||||||||| |||||||||||  |||  | ||||||||||| |||||||||| || |||| |||||    
T  50427017 tctcatcctcgttgaatatgggtagggtaacgggtaagtatatgagaatcgggtatggggatggagaaggtaaaacctatccccacccc 50427105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 12719141 - 12719188
Alignment:
Q  29 atatctcatccccgttgggcatgggtagggtaacgagtaagtatatgg 76  Q
    ||||||||||||||||||  |||||||||||||||  |||||||||||    
T  12719141 atatctcatccccgttggatatgggtagggtaacggataagtatatgg 12719188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 5180776 - 5180702
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||  ||||||||||||| | |||||||||||  |||  | ||| |||| |||||||||||||    
T  5180776 tctcatccccgttggatatgggtagggtaatgggtaagtatatgagaatcgggtatagggacggggaaggtaaaa 5180702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 10778978 - 10779051
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||||||||||||   ||||||| ||||||| |||||||||| | |||| | ||||||||| ||||||||||||    
T  10778978 tctcatccccgttgaatatgggtaaggtaacg-gtaagtatatagaaatagggtatggggatagggaaggtaaaa 10779051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 14892410 - 14892344
Alignment:
Q  53 gtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctaccc 119  Q
    ||||||||||| |||||||||||  |||| | |||||||| ||||||||||||| | ||||| ||||    
T  14892410 gtagggtaacgggtaagtatatgagaatagggtatggggacggggaaggtaaaacccgtccccaccc 14892344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 19892676 - 19892602
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||  | |||||||||||||| ||||||||||||  | || |  |||||||||||||||| ||||    
T  19892676 tctcatccccgttatgtatgggtagggtaacaagtaagtatatgagagtaggggatggggatggggaaggaaaaa 19892602  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 23966583 - 23966509
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||  ||||||| ||||||||||||| | |||||||||||  |||  | |||||||| |||||||||||||    
T  23966583 tctcatcttcgttgggtatgggtagggtaatgggtaagtatatgagaatcggttatggggacggggaaggtaaaa 23966509  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 16903238 - 16903157
Alignment:
Q  23 gatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaa 104  Q
    |||| ||| ||||||||||| |||  |||||||||||||||  ||| || |||| | || | ||||||||||||||||||||    
T  16903238 gattcgatttctcatccccgatggatatgggtagggtaacggataaataaatgggagtagggtatggggatggggaaggtaa 16903157  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 29871647 - 29871736
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccca 121  Q
    ||||||||| |||| | ||| |||||||||| ||||||||||||  |||  | ||||| ||||| ||| |||||||| ||| ||||||||    
T  29871647 tctcatcccagttgagtatgagtagggtaacaagtaagtatatgagaatcgggtatggagatggagaatgtaaaatccgtctctacccca 29871736  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 5293809 - 5293877
Alignment:
Q  24 atttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatgggga 92  Q
    ||||||| ||||||| | | |||| |||||||||||||||||||| ||||||  | || ||||||||||    
T  5293809 atttgatttctcatctctgctgggtatgggtagggtaacgagtaaatatatgagagtatgatatgggga 5293877  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 24710583 - 24710495
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||| | || |||||||||||  |||||||||||  |||  | ||||| || ||||||||||||| | ||||| |||||    
T  24710583 tctcatccccgttgagtataggtagggtaacaggtaagtatatgagaatcgggtatggagacggggaaggtaaaacccgtccccacccc 24710495  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 35077567 - 35077611
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatgg 76  Q
    ||||||| |||||||| ||||||||||||||  ||||||||||||    
T  35077567 tctcatctccgttgggtatgggtagggtaacaggtaagtatatgg 35077611  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 38686374 - 38686290
Alignment:
Q  36 atccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||  | |||||||||||||  ||| ||||||  ||| ||  ||||||||||||||||| ||||| ||||| |||||    
T  38686374 atccccgttggataagggtagggtaacggataaatatatgagaatcagggatggggatggggaaggtgaaatccgtccccacccc 38686290  T

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Target: scaffold0036 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 33120 - 33032
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||| ||||||||| ||||||||||||||| |||||||||||  ||| || |||||||| |||||| |||||| ||||||| |||||    
T  33120 tctcattcccgttgggtatgggtagggtaacgggtaagtatatgagaatcaggtatggggacggggaatgtaaaacctgtccccacccc 33032  T

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Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 24927674 - 24927586
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  24927674 tctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 24927586  T

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Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 34301517 - 34301605
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||||||||||||||  |||||||||||  |||  | |||||||||||||||||||||| | ||||| |||||    
T  34301517 tctcatccccgttgggtatgggtagggtaacaggtaagtatatgataatcgggtatggggatggggaaggtaaaacccgtccccacccc 34301605  T

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Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 2076199 - 2076273
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  |||  | |||||||| |||||||||||||    
T  2076199 tctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaa 2076273  T

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Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 32302785 - 32302697
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||| ||||||| ||||||||||||||| |||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  32302785 tctcatcctcgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 32302697  T

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Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 24870386 - 24870460
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  |||  | |||||||||| ||||| |||||    
T  24870386 tctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggatgaggaagataaaa 24870460  T

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Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 9642730 - 9642819
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccca 121  Q
    |||||||||| ||||  ||||||||| ||||| |||||||||||  ||||   |||||||||||||||||||||| | ||||| ||||||    
T  9642730 tctcatccccattggatatgggtaggataacgggtaagtatatgagaatagagtatggggatggggaaggtaaaacccgtccccacccca 9642819  T

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Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 5858820 - 5858908
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||||||||||||   ||||||| ||||||| |||||||||||  ||| || |||||||| |||||| |||||| ||||||| |||||    
T  5858820 tctcatccccgttgaatatgggtaaggtaacgggtaagtatatgagaatcaggtatggggacggggaatgtaaaacctgtccccacccc 5858908  T

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Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 45235798 - 45235707
Alignment:
Q  29 atatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||||||| ||||||||  ||| ||||||||||| ||||||| |||  |||  |||||||||| ||||||||||||| | ||||| |||||    
T  45235798 atatctcattcccgttggatatgagtagggtaacgggtaagtacatgagaatcggatatggggacggggaaggtaaaacccgtccccacccc 45235707  T

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Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 15068971 - 15069045
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| ||||||||||||||  |||||||||||| | || |  |||||||| ||||||| ||||    
T  15068971 tctcatccccgttgggtatgggtagggtaacaggtaagtatatgggagtaggggatggggattgggaaggcaaaa 15069045  T

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Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 1063259 - 1063162
Alignment:
Q  7 tcggggatggagacaagatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaa 104  Q
    |||||||||| ||  |||||  || |||||||||||||||| || |||||||||||| |||||||||||  |||  | ||||||||  ||||||||||    
T  1063259 tcggggatggggatgagattcaatttctcatccccgttgggtataggtagggtaacgggtaagtatatgagaatcgggtatggggacagggaaggtaa 1063162  T

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Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 2190245 - 2190313
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaag 100  Q
    |||||||||||||||  |||||||||||||||  ||||||||||| | || |  |||||||||||||||    
T  2190245 tctcatccccgttggatatgggtagggtaacggataagtatatggaagtatgggatggggatggggaag 2190313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 27058693 - 27058781
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||| |||||||||  ||||||||||||||| |||||||||||  ||||   |||||||| |||| |||||||| | ||||| |||||    
T  27058693 tctcacccccgttggatatgggtagggtaacgggtaagtatatgagaatagagtatggggacgggggaggtaaaacccgtccccacccc 27058781  T

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Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 6388897 - 6389016
Alignment:
Q  1 aacctgtcggggatggagacaagatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaag 100  Q
    |||| |||||||| || ||  ||||| ||| ||||||||||| |||  ||||||||||||||  |||||||||||  | ||   |||||||| |||||||    
T  6388897 aacccgtcggggacggggatgagattcgatttctcatccccgctggatatgggtagggtaacaggtaagtatatgagagtagagtatggggacggggaag 6388996  T
Q  101 gtaaaatctgtccctacccc 120  Q
    |||||| | ||||| |||||    
T  6388997 gtaaaacccgtccccacccc 6389016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 14186069 - 14185995
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||||||||||| || ||| ||||||||||| |||||||||||  |||  | |||||||| |||||| ||||||    
T  14186069 tctcatccccgttaggtatgtgtagggtaacgggtaagtatatgagaattgggtatggggacggggaatgtaaaa 14185995  T

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Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 28977477 - 28977519
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatat 74  Q
    |||||||||||||||| ||||||||||||||  ||||||||||    
T  28977477 tctcatccccgttgggtatgggtagggtaacaggtaagtatat 28977519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 33633349 - 33633419
Alignment:
Q  36 atccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||| ||||||||||||||  |||||||| ||| | || | |||||||| | |||||||||||    
T  33633349 atccccgttgggtatgggtagggtaacatgtaagtatttgggagtagggtatggggacgaggaaggtaaaa 33633419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 39445925 - 39445999
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||| | || || ||||||||||||||| |||||||||||  ||| || |||||||| || ||||||||||    
T  39445925 tctcatcctcattaggtatgggtagggtaacgggtaagtatatgagaatcaggtatggggacggagaaggtaaaa 39445999  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 4231086 - 4231171
Alignment:
Q  36 atccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccca 121  Q
    |||||||||||| |||||||||||||||  ||| ||||||  |||  | |||||||| || |||||||||| | ||||| ||||||    
T  4231086 atccccgttgggtatgggtagggtaacggataattatatgagaatcgggtatggggacggagaaggtaaaacccgtccccacccca 4231171  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 9434763 - 9434682
Alignment:
Q  25 tttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||| ||| |||| ||||||   |||||| ||||||| |||||||||||  || | | ||||||||||||||||||||||    
T  9434763 tttgatttcttatcctcgttggatgtgggtaaggtaacgggtaagtatatgagaacagggtatggggatggggaaggtaaaa 9434682  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 17220442 - 17220354
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||||||| |||||  |||| |||||||||| |||||||||||  |||  | |||||||| || |||||||||| | ||||| |||||    
T  17220442 tctcatccctgttggatatggatagggtaacgggtaagtatatgagaatcgggtatggggacggagaaggtaaaacccgtccccacccc 17220354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 28345156 - 28345116
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtat 72  Q
    |||||||||||||||| |||||||||||||||  |||||||    
T  28345156 tctcatccccgttgggtatgggtagggtaacggataagtat 28345116  T

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Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 17851595 - 17851507
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  |||  | |||||||| |||||||||||||  |||||| |||||    
T  17851595 tctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacttgtccccacccc 17851507  T

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Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 16865899 - 16865825
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  |||  | |||||||||| |||||||||||    
T  16865899 tctcatccccgttgggtatgggtagggtaacgggtaagtatatgataatcgggtatggggatgaggaaggtaaaa 16865825  T

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Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 21702409 - 21702321
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||| | |||||||||||| || |||||||||||  |||  | |||||||||||||||||||||| | ||||| |||||    
T  21702409 tctcatccccgttgagtatgggtagggtagcgggtaagtatatgagaatcgggtatggggatggggaaggtaaaacccgtccccacccc 21702321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 37578993 - 37578917
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatc 108  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||  |||  | ||||||||||||||| ||||||||    
T  37578993 tctcatccccgttgggtatgagtagggtaacgggtaagtatatgataatcgggtatggggatggggaatgtaaaatc 37578917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 42908414 - 42908502
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||| ||||| ||||||||||||||| |||||||||||| | || |  |||||||||||||||| |||| | ||||| |||||    
T  42908414 tctcatcccctttgggtatgggtagggtaacgggtaagtatatggaagtaggggatggggatggggaaggcaaaacccgtccccacccc 42908502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 10072218 - 10072144
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||||||| |||||| ||||||||||||||  |||||||||||  |||  | ||||||||||||||||||||||    
T  10072218 tctcatccctgttgggtatgggtagggtaacaggtaagtatatgagaatcgggtatggggatggggaaggtaaaa 10072144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 30650360 - 30650286
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||  ||||||||||||||| |||||||||||  |||  | ||||| ||||||||||||||||    
T  30650360 tctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatggagatggggaaggtaaaa 30650286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 10996210 - 10996298
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||||||||||||   |||||||| |||||  |||||||||||  |||| | |||||||||||||||||||||| | ||||| |||||    
T  10996210 tctcatccccgttgaatatgggtagagtaacaggtaagtatatgagaatagggtatggggatggggaaggtaaaacccgtccccacccc 10996298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 25905358 - 25905270
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||||||  |||||| |||||||||||||||||||||||||||  ||| || |||||  | ||||||||||||| | ||||| |||||    
T  25905358 tctcatccttgttgggtatgggtagggtaacgagtaagtatatgagaatcaggtatggaaacggggaaggtaaaacccgtccccacccc 25905270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 33840804 - 33840716
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||| | ||||||||||||||  |||||||||||  |||| |  |||||||||| |||||||||| | ||||| |||||    
T  33840804 tctcatccccgttgagtatgggtagggtaacaggtaagtatatgagaatatggcatggggatggagaaggtaaaacccgtccccacccc 33840716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 35074207 - 35074155
Alignment:
Q  23 gatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    |||| ||| |||||||||||||||| ||||||||||||||| |||||||||||    
T  35074207 gattcgatttctcatccccgttgggtatgggtagggtaacgggtaagtatatg 35074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 37196351 - 37196439
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||||||||||||||| ||||||||| |  ||| || |||| ||| ||| ||||||||| | ||||| |||||    
T  37196351 tctcatccccgttgggtatgggtagggtaacgggtaagtatacgagaatcaggtatgaggacgggaaaggtaaaacccgtccccacccc 37196439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 22962307 - 22962265
Alignment:
Q  34 tcatccccgttgggcatgggtagggtaacgagtaagtatatgg 76  Q
    |||||||||||||| ||||||||||||||| ||||||||||||    
T  22962307 tcatccccgttgggtatgggtagggtaacgggtaagtatatgg 22962265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 27062856 - 27062758
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctaccccattgacatgc 130  Q
    |||||||||||||||| |||||||||||| | ||||||||||||  | || |  ||| |||||||||||| |||| | |||||  |||||||| |||||    
T  27062856 tctcatccccgttgggtatgggtagggtagcaagtaagtatatgagagtaggggatgaggatggggaaggaaaaacccgtccccgccccattgccatgc 27062758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 41103373 - 41103291
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccc 114  Q
    |||||||||||||||| || |||||||||||| ||||| |||||  |||  | |||||||| || |||||||||| |||||||    
T  41103373 tctcatccccgttgggtataggtagggtaacgggtaagcatatgagaatcgggtatggggacggagaaggtaaaacctgtccc 41103291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 3227904 - 3227992
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||  |||||||||||||||  |||||| |||  |||  |||||||||| ||||| ||||||| | ||||| |||||    
T  3227904 tctcatccccgttggatatgggtagggtaacggataagtagatgagaatcggatatggggacggggagggtaaaacccgtccccacccc 3227992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 23534017 - 23534101
Alignment:
Q  22 agatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||| ||| ||||||||||| |||  ||||||||||||||||||||| |||||| | || | |||| ||||||  |||||||||    
T  23534017 agattcgatttctcatccccgctggatatgggtagggtaacgagtaagaatatggaagtagggtatgaggatggaaaaggtaaaa 23534101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 24425175 - 24425103
Alignment:
Q  34 tcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||| ||||||  ||||||||||||||||  |||||||||  |||  ||||||||||||||||| ||||||    
T  24425175 tcatcctcgttggatatgggtagggtaacgaacaagtatatgagaatcggatatggggatggggaatgtaaaa 24425103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 38152630 - 38152542
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||| | ||||||||||||||| |||||||||||  |||    |||||| | ||||||||||||| | ||||| |||||    
T  38152630 tctcatccccgttgagtatgggtagggtaacgggtaagtatatgagaatcgagtatgggaacggggaaggtaaaacccgtccccacccc 38152542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 3920271 - 3920228
Alignment:
Q  29 atatctcatccccgttgggcatgggtagggtaacgagtaagtat 72  Q
    |||||| |||||||||||| ||| ||||||||||||||||||||    
T  3920271 atatctaatccccgttgggtatgtgtagggtaacgagtaagtat 3920228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 18826233 - 18826276
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    ||||||||||||| || ||||||||||||||| |||||||||||    
T  18826233 tctcatccccgttaggtatgggtagggtaacgggtaagtatatg 18826276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 25980291 - 25980330
Alignment:
Q  36 atccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  25980291 atccccgttgggtatgggtagggtaacgggtaagtatatg 25980330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 38140153 - 38140196
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    |||||||||||||||  ||||||||||||||| |||||||||||    
T  38140153 tctcatccccgttggttatgggtagggtaacgggtaagtatatg 38140196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 39316717 - 39316650
Alignment:
Q  39 cccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||||||| ||||||||||||||| |||| ||||||  |||  | |||||| |||||||||||||||    
T  39316717 cccgttgggtatgggtagggtaacgggtaaatatatgagaatcgggtatgggaatggggaaggtaaaa 39316650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 5567504 - 5567578
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||  ||| ||||||||||  |||||||||||  |||| | |||||||| |||| ||||||||    
T  5567504 tctcatccccgttggatatgagtagggtaacaggtaagtatatgagaatagggtatggggacgggggaggtaaaa 5567578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 45886128 - 45886202
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||  ||||||||||||||  |||||||||||  |||  | ||||| || |||||||||||||    
T  45886128 tctcatccccgttggatatgggtagggtaacaggtaagtatatgagaattgggtatggagacggggaaggtaaaa 45886202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 7779737 - 7779648
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccca 121  Q
    |||||||||||||||  ||||||||||||||   |||||||| |  |||  | |||||||| ||||||||||||| | ||||| ||||||    
T  7779737 tctcatccccgttggatatgggtagggtaacagataagtatacgagaatcgggtatggggacggggaaggtaaaacccgtccccacccca 7779648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 8906943 - 8907048
Alignment:
Q  1 aacctgtcggggatggagacaagatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaag 100  Q
    |||| |||||||| |||||  || || ||| ||||||||||||  || || |||||||||||| |||||||||||  ||||  ||||| |||||  ||||    
T  8906943 aacccgtcggggacggagatgaggttcgatttctcatccccgtaaggtataggtagggtaacgggtaagtatatgagaatagaatatgaggatgaagaag 8907042  T
Q  101 gtaaaa 106  Q
    ||||||    
T  8907043 gtaaaa 8907048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 27062649 - 27062690
Alignment:
Q  34 tcatccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    |||||||||||||  ||||||||| |||||||||||||||||    
T  27062649 tcatccccgttggatatgggtaggataacgagtaagtatatg 27062690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 39456342 - 39456413
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| | ||||||||||||  ||||||||||   |||  |||||| ||| |||||||||||||    
T  39456342 tctcatccccgttgggtaggggtagggtaacaggtaagtatat---aatcggatatgaggacggggaaggtaaaa 39456413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 27252238 - 27252171
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaa 99  Q
    |||||||||||||||| |||||||||||||| | ||||||||||  |||||| |||||||||||||||    
T  27252238 tctcatccccgttgggtatgggtagggtaacaaataagtatatgagaataaggtatggggatggggaa 27252171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 39728438 - 39728333
Alignment:
Q  1 aacctgtcggggatggagacaagatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaag 100  Q
    |||| ||||||||||| ||  |||||  || |||||||||||||||| ||||||||||||||  |||||||||||  |||  | |||||||| |||||||    
T  39728438 aacccgtcggggatggggatgagattcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaag 39728339  T
Q  101 gtaaaa 106  Q
    ||||||    
T  39728338 gtaaaa 39728333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 44639000 - 44638912
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||| ||||||||| ||||||||||||||| |||||||||||  |||  | |||||||| ||||||||||||| | ||||| |||||    
T  44639000 tctcattcccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacccc 44638912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 44107162 - 44107236
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  |||  | |||| ||| |||||||||||||    
T  44107162 tctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatgaggacggggaaggtaaaa 44107236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 44252466 - 44252392
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  |||  | |||||||| ||| |||||||||    
T  44252466 tctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacgggaaaggtaaaa 44252392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 6738735 - 6738823
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||||||||||||| | |||||||||||  |||  | |||||| | ||||||||||||| | ||||| |||||    
T  6738735 tctcatccccgttgggtatgggtagggtaatgggtaagtatatgagaatcgggtatgggaacggggaaggtaaaacccgtccccacccc 6738823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 7470141 - 7470228
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  |||  | ||||||||  |||||||||||| | ||||| |||||    
T  7470141 tctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatgggga-cgggaaggtaaaacccgtccccacccc 7470228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 23547341 - 23547429
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| |||||||||||||||  ||||||||||  |||  | |||||||| ||||||| ||||| | ||||| |||||    
T  23547341 tctcatccccgttgggtatgggtagggtaacggataagtatatgagaatcgggtatggggacggggaagataaaacccgtccccacccc 23547429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 30616667 - 30616755
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||||||  |||||  |||||||||||||| ||||||||||||  |||| | |||||||||||||| ||||||| | ||||| |||||    
T  30616667 tctcatccttgttggatatgggtagggtaacaagtaagtatatgagaatagggtatggggatggggatggtaaaacccgtccccacccc 30616755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 34154141 - 34154053
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||  |||  | || ||||| ||||||||||||| | ||||| |||||    
T  34154141 tctcatccccgtggggtatgggtagggtaacgggtaagtatatgtgaatcgggtacggggacggggaaggtaaaacccgtccccacccc 34154053  T

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Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 39655626 - 39655714
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||||||| |||||| ||||||||||||| | |||||||||||  ||| |  |||||||| ||||||||||||| | ||||| |||||    
T  39655626 tctcatccctgttgggtatgggtagggtaatgggtaagtatatgagaatcatgtatggggacggggaaggtaaaaaccgtccccacccc 39655714  T

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Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 34025684 - 34025602
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccc 114  Q
    |||||||||||||||  |||  |||||||||| |||||||||||  ||| || |||||||| || |||||||||||| |||||    
T  34025684 tctcatccccgttggatatgaatagggtaacgggtaagtatatgagaatcaggtatggggacggagaaggtaaaatccgtccc 34025602  T

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Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44179083 - 44179009
Alignment:
Q  1 aacctgtcggggatggagacaagatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    ||||||||||||| || ||  |||||  || |||||||| ||||||| ||||||||||||||| |||||||||||    
T  44179083 aacctgtcggggacggggatgagattcaatttctcatccacgttgggtatgggtagggtaacgggtaagtatatg 44179009  T

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Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 49025407 - 49025333
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||  ||||||||||||||| |||||||||||  |||  | |||| ||| |||||||||||||    
T  49025407 tctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatgaggacggggaaggtaaaa 49025333  T

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Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 55439042 - 55439116
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||  ||||||||||||||| |||||||||||  |||  |||||||||| | |||| ||||||    
T  55439042 tctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcggatatggggacgaggaatgtaaaa 55439116  T

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Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 20716174 - 20716105
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaagg 101  Q
    |||||||| ||||||| ||||||||| ||||| |||||||||||| | |||   ||||||||||||||||    
T  20716174 tctcatcctcgttgggtatgggtaggataacgggtaagtatatggaagtaaaggatggggatggggaagg 20716105  T

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Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 44162500 - 44162435
Alignment:
Q  41 cgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||||| ||||||||||||||| |||||||||||  |||  | |||||||| |||||||||||||    
T  44162500 cgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaa 44162435  T

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Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 29284060 - 29283972
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||||||||| |||| |||||||||| |||||||||||  |||  | |||| ||| || |||||||||| | ||||| |||||    
T  29284060 tctcatccccgttgggtatggatagggtaacgggtaagtatatgagaatcgggtatgaggacggagaaggtaaaacccgtccccacccc 29283972  T

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Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 42758125 - 42758082
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    |||||||||||||||  ||||||||||||||| |||||||||||    
T  42758125 tctcatccccgttggatatgggtagggtaacgggtaagtatatg 42758082  T

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Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 52572339 - 52572296
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    |||||||||||||||| | ||||||||||||| |||||||||||    
T  52572339 tctcatccccgttgggtacgggtagggtaacgggtaagtatatg 52572296  T

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Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 1772779 - 1772821
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatat 74  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||    
T  1772779 tctcatccccgttgggtatgcgtagggtaacgggtaagtatat 1772821  T

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Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 4557668 - 4557750
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccc 114  Q
    |||||||||||| ||| |||| |||||||||| |||| ||||||  |||  | ||||||||||||||| | |||| |||||||    
T  4557668 tctcatccccgtcgggtatggatagggtaacgggtaaatatatgagaatcgggtatggggatggggaatgcaaaacctgtccc 4557750  T

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Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 10043618 - 10043684
Alignment:
Q  40 ccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||  ||||||||||||||| |||||||||||| |||  |  ||||||||| |||||||||||    
T  10043618 ccgttggatatgggtagggtaacgggtaagtatatgggaatcggggatggggatgtggaaggtaaaa 10043684  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 22536207 - 22536281
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||||||| ||| ||||||||||   |||| |||||  ||| |||||| |||| |||||||||||||    
T  22536207 tctcatccccgttgggtatgagtagggtaacagataagcatatgagaatcagatatagggacggggaaggtaaaa 22536281  T

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Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 30905191 - 30905261
Alignment:
Q  36 atccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||||||| ||||||||||||||  ||||| |||||| | || | |||||| | |||||||||||||    
T  30905191 atccccgttgggtatgggtagggtaacaggtaagaatatggaagtagggtatgggaacggggaaggtaaaa 30905261  T

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Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 31127158 - 31127232
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||| ||||||||  ||||||||||||||| |||||||||||  |||  | |||||||| |||||| ||||||    
T  31127158 tctcattcccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaatgtaaaa 31127232  T

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Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 43582282 - 43582228
Alignment:
Q  52 ggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||||||||||||||||||||    ||| |||||||| ||||||||||||||||    
T  43582282 ggtagggtaacgagtaagtatacaagaatcagatatggagatggggaaggtaaaa 43582228  T

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Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 49579789 - 49579715
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||||||||||| |  ||| ||||||||||| ||||||| |||  ||| || |||||||| |||||||||||||    
T  49579789 tctcatccccgttagatatgagtagggtaacgggtaagtacatgagaatcaggtatggggacggggaaggtaaaa 49579715  T

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Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 40796523 - 40796566
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatgg 76  Q
    |||||||||||||| | ||||||||| ||||||||||||||||||    
T  40796523 tctcatccccgttgagtatgggtagg-taacgagtaagtatatgg 40796566  T

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Target: scaffold1630 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1630
Description:

Target: scaffold1630; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 1379 - 1259
Alignment:
Q  1 aacctgtcggggatggagacaagatttgatatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaag 100  Q
    |||| ||||||||||||||  |||||  || ||||||||||||| || |||| |||||||||   ||||||||||  ||| ||| ||||||| |||||||    
T  1379 aacccgtcggggatggagatgagattcaatttctcatccccgttaggtatggatagggtaacagataagtatatgagaatcagacatggggacggggaag 1280  T
Q  101 gtaaaatctgtccctacccca 121  Q
    |||||| | ||||| ||||||    
T  1279 gtaaaacccgtccccacccca 1259  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 14507 - 14595
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    ||||||||| |||||| ||||||||||||||  |||||||||||  |||  | |||||||| |||||| |||||||| ||||| |||||    
T  14507 tctcatccctgttgggtatgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaatgtaaaatccgtccccacccc 14595  T

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Target: scaffold0189 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 3983 - 3896
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctaccc 119  Q
    |||||||||||||||| |||||||||||||  ||||| ||||||  |||  | |||||||| || |||||||||||| ||||| ||||    
T  3983 tctcatccccgttgggtatgggtagggtaataagtaaatatatgagaatcgggtatggggacggagaaggtaaaatccgtccccaccc 3896  T

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Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 56282 - 56356
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    ||||||||| |||||  ||||||||||||||| |||||||||||| | || |  |||||||||||||||| ||||    
T  56282 tctcatccctgttggatatgggtagggtaacgggtaagtatatgggagtaggggatggggatggggaaggcaaaa 56356  T

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Target: scaffold0157 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 14540 - 14464
Alignment:
Q  29 atatctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaa 105  Q
    |||||||||||| ||||| ||||||||||||||| | ||||||| | | | || |||||| ||||||| ||||||||    
T  14540 atatctcatccctgttggacatgggtagggtaacaaataagtattttggagtaggatatgaggatgggaaaggtaaa 14464  T

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Target: scaffold0244 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 5006 - 5049
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatg 75  Q
    ||||||||||||| || ||| |||||||||||||||||||||||    
T  5006 tctcatccccgttaggtatgagtagggtaacgagtaagtatatg 5049  T

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Target: scaffold0095 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 32887 - 32961
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaa 106  Q
    |||||||| | || || ||||||||||||||| |||||||||||  ||| || |||||||| || ||||||||||    
T  32887 tctcatcctcattaggtatgggtagggtaacgggtaagtatatgagaatcaggtatggggacggagaaggtaaaa 32961  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 199156 - 199244
Alignment:
Q  32 tctcatccccgttgggcatgggtagggtaacgagtaagtatatggcaataagatatggggatggggaaggtaaaatctgtccctacccc 120  Q
    |||||||||| ||| | ||||||||||||||  |||||||||||  |||  | |||||||| |||||| |||||| | ||||| |||||    
T  199156 tctcatcccctttgagtatgggtagggtaactggtaagtatatgagaatctggtatggggacggggaatgtaaaacccgtccccacccc 199244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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