View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0889_low_23 (Length: 228)
Name: NF0889_low_23
Description: NF0889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0889_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 31607562 - 31607364
Alignment:
| Q |
1 |
gccagacccataaggaccatagagaatcctcaaaagtttaggtttggcaaacacaccagaaaggattcccccaagaataccagccacagcatgagtgtga |
100 |
Q |
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| T |
31607562 |
gccagacccataaggaccatagagaatcctcaaaagtttaggtttggcaaacacaccagaaaggattcccccaagaataccagccacagcatgagtgtga |
31607463 |
T |
|
| Q |
101 |
aagactcctaatgtatcatctacactttgaaagaatgacgatcttttgtgcaacaccatcatcgtgtaccatggaattgagccggacaaagctcccatc |
199 |
Q |
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||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
31607462 |
aagactcctaatgtatcatctacactttgaaagaatggtgattttttgtgcaacaccatcatcgtgtaccatggaattgaaccggacaaagctcccatc |
31607364 |
T |
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