View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0889_low_24 (Length: 207)
Name: NF0889_low_24
Description: NF0889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0889_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 6775456 - 6775299
Alignment:
| Q |
1 |
aaaacagatccttctccatcttcaatctctcctttccaaaatctgtcaccagaaattgctccacttttgccttctcctggtggtgctttaccaactccta |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
6775456 |
aaaacagatccttctccatcttcaatctctcctttccaaaatctgtcaccagaaattgctccacttttgccttctcctggtggtgctttgccaactccta |
6775357 |
T |
|
| Q |
101 |
caggctctgacattcccaccattccttccaacccaagccctccaaaccctgatgatgt |
158 |
Q |
| |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
6775356 |
caggctctgacattcccactattccttccaacccaagccctccaaaccctgatgatgt |
6775299 |
T |
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