View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0890_low_11 (Length: 272)

Name: NF0890_low_11
Description: NF0890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0890_low_11
NF0890_low_11
[»] chr6 (28 HSPs)
chr6 (37-272)||(4991002-4991237)
chr6 (37-272)||(18823478-18823712)
chr6 (37-272)||(18839333-18839567)
chr6 (101-272)||(32276854-32277024)
chr6 (109-272)||(16300071-16300234)
chr6 (89-272)||(19629314-19629495)
chr6 (37-120)||(18583264-18583346)
chr6 (72-183)||(16231859-16231969)
chr6 (72-183)||(18087002-18087112)
chr6 (72-183)||(13620973-13621083)
chr6 (37-159)||(17083373-17083496)
chr6 (72-248)||(23977736-23977910)
chr6 (72-186)||(18381851-18381965)
chr6 (65-235)||(22361885-22362054)
chr6 (64-235)||(18398895-18399065)
chr6 (87-218)||(19854135-19854265)
chr6 (65-218)||(25919571-25919723)
chr6 (72-235)||(21623133-21623295)
chr6 (76-218)||(33538506-33538647)
chr6 (112-218)||(25651242-25651347)
chr6 (64-236)||(34966823-34966995)
chr6 (167-252)||(29869886-29869970)
chr6 (64-218)||(29605406-29605560)
chr6 (202-245)||(15005024-15005067)
chr6 (202-245)||(22585664-22585707)
chr6 (202-245)||(22590495-22590538)
chr6 (87-186)||(33324673-33324772)
chr6 (87-186)||(35136180-35136279)
[»] chr5 (27 HSPs)
chr5 (37-272)||(16105573-16105808)
chr5 (37-272)||(108923-109158)
chr5 (72-272)||(9730473-9730672)
chr5 (109-268)||(7528902-7529061)
chr5 (101-272)||(17909500-17909670)
chr5 (72-248)||(10778085-10778259)
chr5 (38-120)||(11583982-11584063)
chr5 (72-183)||(23514528-23514638)
chr5 (65-235)||(7728378-7728547)
chr5 (64-218)||(24084034-24084187)
chr5 (101-218)||(29917958-29918075)
chr5 (125-218)||(23493937-23494029)
chr5 (64-218)||(6456580-6456734)
chr5 (65-218)||(21616974-21617126)
chr5 (38-76)||(24225596-24225634)
chr5 (65-102)||(32966399-32966436)
chr5 (125-225)||(23981646-23981745)
chr5 (65-218)||(37983325-37983474)
chr5 (64-185)||(1168373-1168495)
chr5 (64-185)||(3673818-3673940)
chr5 (64-235)||(5450963-5451134)
chr5 (167-252)||(23328619-23328703)
chr5 (167-252)||(24616223-24616307)
chr5 (167-252)||(24712599-24712683)
chr5 (167-252)||(24745617-24745701)
chr5 (125-218)||(26559952-26560044)
chr5 (84-235)||(19862186-19862336)
[»] chr4 (30 HSPs)
chr4 (37-272)||(16522748-16522983)
chr4 (37-272)||(9295624-9295859)
chr4 (101-272)||(14996122-14996292)
chr4 (101-272)||(8044935-8045109)
chr4 (101-272)||(19697463-19697633)
chr4 (101-272)||(19708048-19708218)
chr4 (161-272)||(14500307-14500418)
chr4 (87-272)||(9795195-9795381)
chr4 (84-183)||(7132244-7132342)
chr4 (130-252)||(22738293-22738414)
chr4 (37-218)||(7185981-7186159)
chr4 (65-218)||(7964848-7965000)
chr4 (113-235)||(15044834-15044955)
chr4 (72-248)||(20000690-20000864)
chr4 (73-218)||(40905071-40905214)
chr4 (113-235)||(15109469-15109590)
chr4 (65-186)||(19821944-19822065)
chr4 (72-235)||(41166066-41166228)
chr4 (168-218)||(32460840-32460890)
chr4 (64-216)||(41256508-41256660)
chr4 (113-216)||(15013421-15013523)
chr4 (115-218)||(18238294-18238396)
chr4 (65-215)||(18276392-18276541)
chr4 (167-252)||(26339081-26339165)
chr4 (65-102)||(37957277-37957314)
chr4 (127-218)||(54398403-54398493)
chr4 (85-159)||(32460880-32460953)
chr4 (113-235)||(38764715-38764836)
chr4 (167-211)||(22352197-22352241)
chr4 (232-272)||(32460798-32460838)
[»] scaffold0028 (2 HSPs)
scaffold0028 (37-272)||(130486-130721)
scaffold0028 (87-245)||(79519-79677)
[»] chr2 (20 HSPs)
chr2 (37-272)||(25212977-25213213)
chr2 (37-272)||(24826809-24827044)
chr2 (85-272)||(17204309-17204496)
chr2 (85-272)||(28031329-28031516)
chr2 (101-272)||(15633208-15633378)
chr2 (37-235)||(19433452-19433649)
chr2 (129-272)||(33128067-33128209)
chr2 (65-186)||(3409-3529)
chr2 (72-183)||(12636047-12636157)
chr2 (72-183)||(42178148-42178258)
chr2 (72-248)||(12641757-12641931)
chr2 (72-183)||(8943813-8943923)
chr2 (37-235)||(43645824-43646020)
chr2 (72-248)||(3798718-3798892)
chr2 (64-218)||(24884643-24884796)
chr2 (167-252)||(5888740-5888824)
chr2 (125-241)||(19669222-19669338)
chr2 (85-186)||(25305423-25305524)
chr2 (68-235)||(67952-68119)
chr2 (167-252)||(23774198-23774282)
[»] chr3 (28 HSPs)
chr3 (37-272)||(9303190-9303425)
chr3 (37-272)||(19946629-19946863)
chr3 (72-272)||(16934064-16934263)
chr3 (85-272)||(11477281-11477467)
chr3 (101-272)||(8275935-8276105)
chr3 (101-272)||(8268835-8269005)
chr3 (109-268)||(14284963-14285122)
chr3 (37-186)||(47784915-47785064)
chr3 (37-121)||(7853913-7853996)
chr3 (72-183)||(18910960-18911070)
chr3 (37-120)||(33341812-33341894)
chr3 (37-120)||(54685543-54685625)
chr3 (64-218)||(12952920-12953074)
chr3 (65-186)||(38811176-38811297)
chr3 (64-218)||(1990759-1990913)
chr3 (64-218)||(6228762-6228916)
chr3 (85-235)||(17191519-17191668)
chr3 (203-269)||(18970016-18970082)
chr3 (125-235)||(12488846-12488955)
chr3 (74-215)||(17204667-17204807)
chr3 (65-182)||(34559857-34559974)
chr3 (113-218)||(4162342-4162446)
chr3 (65-102)||(17960565-17960602)
chr3 (115-218)||(41661573-41661675)
chr3 (73-186)||(9590922-9591035)
chr3 (115-237)||(31412451-31412572)
chr3 (113-183)||(51961308-51961378)
chr3 (87-235)||(3576558-3576705)
[»] scaffold0615 (1 HSPs)
scaffold0615 (101-272)||(6306-6477)
[»] chr1 (19 HSPs)
chr1 (72-272)||(21650130-21650329)
chr1 (130-272)||(20254336-20254478)
chr1 (72-183)||(17148534-17148644)
chr1 (72-235)||(20177140-20177302)
chr1 (73-216)||(21194980-21195122)
chr1 (65-140)||(27674755-27674829)
chr1 (125-186)||(36356461-36356522)
chr1 (66-140)||(22829638-22829712)
chr1 (65-140)||(38033888-38033962)
chr1 (72-186)||(41229107-41229221)
chr1 (167-252)||(7641044-7641128)
chr1 (65-102)||(19603055-19603092)
chr1 (87-218)||(49997418-49997548)
chr1 (151-218)||(52400675-52400741)
chr1 (72-185)||(13377009-13377122)
chr1 (65-186)||(37234028-37234149)
chr1 (125-218)||(8538047-8538139)
chr1 (125-218)||(8603286-8603378)
chr1 (167-252)||(22035509-22035593)
[»] chr8 (24 HSPs)
chr8 (72-272)||(3431371-3431570)
chr8 (85-272)||(22886305-22886491)
chr8 (101-272)||(18612401-18612571)
chr8 (101-272)||(18619306-18619476)
chr8 (101-272)||(22147433-22147603)
chr8 (101-272)||(2544944-2545111)
chr8 (85-272)||(21494551-21494725)
chr8 (72-183)||(13721107-13721217)
chr8 (64-218)||(33528383-33528535)
chr8 (65-218)||(5854572-5854724)
chr8 (72-235)||(21198272-21198434)
chr8 (65-218)||(38533607-38533759)
chr8 (72-235)||(23837163-23837325)
chr8 (65-218)||(26011452-26011604)
chr8 (73-218)||(27233204-27233348)
chr8 (72-248)||(16873166-16873340)
chr8 (64-218)||(18261608-18261762)
chr8 (65-186)||(22736006-22736127)
chr8 (73-215)||(37653756-37653895)
chr8 (73-218)||(33611190-33611334)
chr8 (125-218)||(38635785-38635877)
chr8 (64-218)||(18041669-18041823)
chr8 (205-245)||(23217974-23218014)
chr8 (87-218)||(45465263-45465393)
[»] chr7 (23 HSPs)
chr7 (72-272)||(371055-371254)
chr7 (72-183)||(14251077-14251187)
chr7 (72-183)||(15927535-15927645)
chr7 (72-183)||(18980200-18980310)
chr7 (37-185)||(7284229-7284376)
chr7 (37-186)||(14272054-14272203)
chr7 (72-248)||(13758337-13758511)
chr7 (72-235)||(17224058-17224220)
chr7 (65-218)||(48356602-48356754)
chr7 (64-235)||(13377485-13377656)
chr7 (65-186)||(16915096-16915217)
chr7 (65-218)||(34241325-34241477)
chr7 (167-252)||(10000480-10000564)
chr7 (200-245)||(13352044-13352089)
chr7 (113-218)||(15358803-15358907)
chr7 (167-252)||(16418559-16418643)
chr7 (113-218)||(20583691-20583795)
chr7 (125-218)||(31501191-31501283)
chr7 (115-218)||(17947729-17947831)
chr7 (113-183)||(25124136-25124206)
chr7 (87-218)||(13448964-13449094)
chr7 (87-218)||(28390292-28390422)
chr7 (64-218)||(38424175-38424329)
[»] scaffold0335 (1 HSPs)
scaffold0335 (68-272)||(5671-5875)
[»] scaffold0029 (1 HSPs)
scaffold0029 (85-268)||(49942-50124)
[»] scaffold0173 (1 HSPs)
scaffold0173 (109-272)||(5224-5386)
[»] scaffold0162 (1 HSPs)
scaffold0162 (101-272)||(11740-11909)
[»] scaffold0001 (1 HSPs)
scaffold0001 (100-272)||(165056-165224)
[»] scaffold0207 (1 HSPs)
scaffold0207 (101-272)||(17695-17863)
[»] scaffold0023 (1 HSPs)
scaffold0023 (127-272)||(61317-61461)
[»] scaffold0118 (1 HSPs)
scaffold0118 (168-272)||(34503-34607)
[»] scaffold0032 (2 HSPs)
scaffold0032 (72-251)||(13395-13575)
scaffold0032 (65-102)||(94024-94061)
[»] scaffold0150 (2 HSPs)
scaffold0150 (37-235)||(28466-28663)
scaffold0150 (37-87)||(21637-21687)
[»] scaffold0367 (1 HSPs)
scaffold0367 (169-272)||(17404-17506)
[»] scaffold0833 (1 HSPs)
scaffold0833 (37-185)||(3230-3377)
[»] scaffold0158 (1 HSPs)
scaffold0158 (37-120)||(24890-24972)
[»] scaffold0120 (2 HSPs)
scaffold0120 (37-181)||(21442-21586)
scaffold0120 (37-185)||(31141-31289)
[»] scaffold1867 (1 HSPs)
scaffold1867 (37-185)||(75-222)
[»] scaffold0310 (2 HSPs)
scaffold0310 (37-185)||(283-430)
scaffold0310 (37-114)||(6603-6679)
[»] scaffold0080 (2 HSPs)
scaffold0080 (65-218)||(43935-44087)
scaffold0080 (64-218)||(23809-23963)
[»] scaffold0009 (2 HSPs)
scaffold0009 (65-218)||(69415-69567)
scaffold0009 (206-245)||(244920-244959)
[»] scaffold0053 (1 HSPs)
scaffold0053 (72-235)||(76967-77129)
[»] scaffold0077 (1 HSPs)
scaffold0077 (64-218)||(6500-6654)
[»] scaffold0700 (1 HSPs)
scaffold0700 (65-218)||(2483-2635)
[»] scaffold0231 (1 HSPs)
scaffold0231 (40-97)||(12990-13048)
[»] scaffold0022 (1 HSPs)
scaffold0022 (65-186)||(103090-103211)
[»] scaffold0193 (1 HSPs)
scaffold0193 (113-218)||(4611-4715)
[»] scaffold1272 (1 HSPs)
scaffold1272 (68-235)||(270-436)
[»] scaffold0020 (1 HSPs)
scaffold0020 (64-183)||(107967-108086)
[»] scaffold0013 (1 HSPs)
scaffold0013 (72-235)||(35444-35605)
[»] scaffold1500 (1 HSPs)
scaffold1500 (144-183)||(1693-1732)
[»] scaffold0010 (1 HSPs)
scaffold0010 (65-186)||(30978-31099)
[»] scaffold0155 (1 HSPs)
scaffold0155 (167-252)||(23859-23943)
[»] scaffold0075 (1 HSPs)
scaffold0075 (72-248)||(4906-5081)
[»] scaffold0016 (1 HSPs)
scaffold0016 (72-180)||(116687-116795)
[»] scaffold0004 (1 HSPs)
scaffold0004 (64-215)||(27453-27604)
[»] scaffold0003 (1 HSPs)
scaffold0003 (167-252)||(7271-7355)
[»] scaffold0970 (1 HSPs)
scaffold0970 (125-225)||(2473-2572)
[»] scaffold0670 (1 HSPs)
scaffold0670 (64-218)||(7812-7966)
[»] scaffold0507 (1 HSPs)
scaffold0507 (205-245)||(1619-1659)
[»] scaffold0253 (2 HSPs)
scaffold0253 (64-214)||(7358-7508)
scaffold0253 (64-214)||(16783-16933)
[»] scaffold0148 (1 HSPs)
scaffold0148 (87-218)||(37538-37668)
[»] scaffold0025 (1 HSPs)
scaffold0025 (64-218)||(85489-85643)
[»] scaffold0017 (1 HSPs)
scaffold0017 (37-77)||(12694-12734)
[»] scaffold0483 (1 HSPs)
scaffold0483 (68-186)||(6622-6740)
[»] scaffold0151 (1 HSPs)
scaffold0151 (167-218)||(22559-22609)
[»] scaffold0090 (1 HSPs)
scaffold0090 (37-72)||(3392-3427)
[»] scaffold0447 (2 HSPs)
scaffold0447 (125-187)||(4581-4643)
scaffold0447 (125-187)||(9195-9257)
[»] scaffold0387 (1 HSPs)
scaffold0387 (113-183)||(1117-1187)
[»] scaffold0243 (1 HSPs)
scaffold0243 (125-235)||(2436-2545)
[»] scaffold0521 (1 HSPs)
scaffold0521 (113-186)||(11100-11173)
[»] scaffold0183 (1 HSPs)
scaffold0183 (167-252)||(6659-6743)
[»] scaffold0063 (1 HSPs)
scaffold0063 (202-243)||(44234-44275)
[»] scaffold1295 (1 HSPs)
scaffold1295 (205-245)||(203-243)


Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 37 - 272
Target Start/End: Original strand, 4991002 - 4991237
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4991002 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaag 4991101  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 236  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4991102 ccaaaattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacaccaattcaacaacaacatgtcataagtcatcaatta 4991201  T
Q  237 agcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||||||||||||||||||||||||||||    
T  4991202 agcataatttcacaacaacccattttcatacattat 4991237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 37 - 272
Target Start/End: Complemental strand, 18823712 - 18823478
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| ||| |||||||||||||    || | |||||||    
T  18823712 acatcatcaaaatcaaacttcttctttatcaagccattttacaaaaccaccaccaacaactcattt-ctccacaacaatcatgaatcatgcaaacccaag 18823614  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 236  Q
    ||||   | || |||||||||||  |  | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18823613 ccatggattatcatcaacaacatgacatatcaacaacaacatcaattgaaacttgattcacaccgcaattcaacaacaacatgtcataagtcatcaatta 18823514  T
Q  237 agcataatttcacaacaacccattttcatacattat 272  Q
    ||||||| ||||||||||||||||||||||||||||    
T  18823513 agcataacttcacaacaacccattttcatacattat 18823478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 37 - 272
Target Start/End: Complemental strand, 18839567 - 18839333
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||| ||||| ||||||||||||| ||| |||||||||||||    || | |||||||    
T  18839567 acatcatcaaaatcaaacttcttctttttcaactcattttacaaaaccaccaccaacaactcattt-ctccacaacaatcatgaatcatgcaaacccaag 18839469  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 236  Q
    ||||   | || |||||||||||  |  | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18839468 ccatggattatcatcaacaacatgacatatcaacaacaacatcaattgaaacttgattcacaccccaattcaacaataacatgtcataagtcatcaatta 18839369  T
Q  237 agcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||||||||||||||||||||||||||||    
T  18839368 agcataatttcacaacaacccattttcatacattat 18839333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 101 - 272
Target Start/End: Complemental strand, 32277024 - 32276854
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32277024 tttctcaccaacaatcatgatatatgaacacccaagccataat-cataaacaacaacatatctcagcaacaacaacatcaattgaaacttgattctcacc 32276926  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     ||||||||||| ||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||    
T  32276925 tcaattcaacaataacatgtcacaattcatcaattaagcataatttcacaactacccattttcatacattat 32276854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 109 - 272
Target Start/End: Complemental strand, 16300234 - 16300071
Alignment:
Q  109 caacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattca 208  Q
    ||||||||||||||| |||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  16300234 caacaatcatgatatatgaacacccaagccataaatcatatacaacaacatatctcagcaacaacaacatcaattgaaacttgattctcacctcaattca 16300135  T
Q  209 acaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
    || |||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||    
T  16300134 accacaacatgtcataatttatcaattaggcataatttcacaacaacccattttcatacattat 16300071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 89 - 272
Target Start/End: Original strand, 19629314 - 19629495
Alignment:
Q  89 acaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaac 188  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||||||||| ||| | ||||||||| ||||||||||||||||||||||| || |    
T  19629314 acaacaactcattt-ctcaccaacaatcatgatatatgaacacccaagccataat-cataaacaacaacatgtctcagcaacaacaacatcaattaaatc 19629411  T
Q  189 ttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
    ||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||    
T  19629412 ttgattctcacctcaattcaacaacaacatgtcacaattcatcaattaagcataatttcataacaacccattttcatacattat 19629495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 18583264 - 18583346
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatga 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  18583264 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactca-tttctcaacaacaatcatga 18583346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 72 - 183
Target Start/End: Original strand, 16231859 - 16231969
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| |||| ||||||| ||| ||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  16231859 atttcacaaaaccaccaacaacatcttattt-ctcatcaacaattatggtatatgaacacccaagccataaatcataatcaacaacatatctcagcaaca 16231957  T
Q  172 acaacatcaatt 183  Q
    ||||||||||||    
T  16231958 acaacatcaatt 16231969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 18087112 - 18087002
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||| ||||| || |||| |||| ||||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  18087112 atttcacaaaaccaccaccaacatcttattt-ctcatcaacaattatgatatatgaacacccaagccataaatcataatcaacaacatatctcagcaaca 18087014  T
Q  172 acaacatcaatt 183  Q
    ||||||||||||    
T  18087013 acaacatcaatt 18087002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 13621083 - 13620973
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||  |||| ||||||| ||| ||| |||||||||||| |||||||||| |||||||||||||||||||||||    
T  13621083 atttcacaaaaccaccaacaacatcttattg-ctcatcaacaattatggtatatgaacacccaagtcataattcataatcaacaacatatctcagcaaca 13620985  T
Q  172 acaacatcaatt 183  Q
    ||||||||||||    
T  13620984 acaacatcaatt 13620973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 159
Target Start/End: Complemental strand, 17083496 - 17083373
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacaccca 134  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| || ||||||||||||| ||||| | || | ||||||||| | ||||||||||    
T  17083496 acatcatcaaaatcaaacttcttcattatcaacccattttcacaaaaacaacaacaacaactca-tttctaatcatcaaatcatgatttatgaacaccca 17083398  T
Q  135 agccataattcatgatcaacaacat 159  Q
    |||||| | |||| | |||||||||    
T  17083397 agccatgaatcatcaacaacaacat 17083373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 248
Target Start/End: Original strand, 23977736 - 23977910
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| |||||| |||| || |||| |||| ||||||| ||| ||| ||||||||||||||  || ||||  ||||||||||||||||||||||    
T  23977736 atttcacaaaaccaccaataacatcttattt-ctcatcaacaattatggtatatgaacacccaagcctcaaatcatactcaacaacatatctcagcaaca 23977834  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttca 248  Q
    |||||||||||| | |  ||||| ||| | || |||||| | ||||| ||| |  |||||||||||| |||||||||    
T  23977835 acaacatcaatt-acatatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataatttca 23977910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 18381965 - 18381851
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaac 170  Q
    |||| |||||| ||||||||||||||||||| |||| |||||| ||||||  | |||| ||||||||||| | |||| | |||||||||  || ||||||    
T  18381965 atttcacaaaaccaccaacaacaactcattt-ctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaac 18381867  T
Q  171 aacaacatcaattgaa 186  Q
    ||||||||||||||||    
T  18381866 aacaacatcaattgaa 18381851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 235
Target Start/End: Complemental strand, 22362054 - 22361885
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaat-catgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    ||||||||||||||||||  | ||||||||||||| || |||| || |||| |||||  | |||||||||||||||| | |||| | |||||| ||  ||    
T  22362054 tcaacccattttacaaaactaacaacaacaactcaatt-ctcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcact 22361956  T
Q  164 cagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
     |||||||||||||||||||||| | ||| |  || | |||||||||||||||||  ||||| |||||||||    
T  22361955 tagcaacaacaacatcaattgaa-catgaatttcatcacaattcaacaacaacatagcataattcatcaatt 22361885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 235
Target Start/End: Original strand, 18398895 - 18399065
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatc 162  Q
    ||||||||||||| |||||| || |||||||||||||||| || | ||  | ||||||  | || ||||||||||||| | | || |||||||||||  |    
T  18398895 atcaacccatttttacaaaaccaacaacaacaactcattt-cttatcacaattcatgaattatgcacacccaagccatgaattatcatcaacaacatcac 18398993  T
Q  163 tcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    | |||||||||||||||||||| ||| ||| || || | |||||||||||||||||  ||||| ||| |||||    
T  18398994 ttagcaacaacaacatcaattg-aacatgaatctcatcacaattcaacaacaacatagcataattcaacaatt 18399065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 19854135 - 19854265
Alignment:
Q  87 caacaacaactcattttctcaacaacaat-catgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattga 185  Q
    |||||||||||||||| |||| || |||| |||||| | ||||||||||||| || | |||| | |||||| || ||| ||||||||||||||||||| |    
T  19854135 caacaacaactcattt-ctcatcatcaattcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttagcaacaacaacatcaatt-a 19854232  T
Q  186 aacttgattcacaccccaattcaacaacaacat 218  Q
    ||| |||||| || | ||||||||||| |||||    
T  19854233 aacatgattctcatcacaattcaacaataacat 19854265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 25919571 - 25919723
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacat-atc 162  Q
    ||||| ||||||||||| |||||||||| |||||||||| ||| |||||| ||||||  | |||| ||||||||||| | |||| | ||||||||| ||     
T  25919571 tcaactcattttacaaagtcaccaacaataactcatttt-tcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcata 25919669  T
Q  163 tcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    | |||||||||||||||||||||| | || ||| || |  ||||||||||||||||    
T  25919670 t-agcaacaacaacatcaattgaa-catggttctcatcataattcaacaacaacat 25919723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 235
Target Start/End: Original strand, 21623133 - 21623295
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaac 170  Q
    ||||||| |||  ||||||||||||||||||| ||| | |||| ||||||  | |||| ||||||||||| | |||| | || ||||||  || ||||||    
T  21623133 attttaccaaactaccaacaacaactcatttt-tcatccacaaatcatgaattatgaatacccaagccatgactcattaacatcaacatcacttagcaac 21623231  T
Q  171 aacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    |||||||||||| | ||| ||||||  ||| |||||||||||||||||  ||||| ||| |||||    
T  21623232 aacaacatcaatag-aacatgattcttaccacaattcaacaacaacatagcataattcaacaatt 21623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 33538647 - 33538506
Alignment:
Q  76 tacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaaca 174  Q
    ||||||| || |||||||||||||||| |||| || ||| ||||||| | ||||||| |||||||| | |||| | |||||| ||  || ||||| ||||    
T  33538647 tacaaaaccaacaacaacaactcattt-ctcatcatcaaatcatgatttatgaacactcaagccatgaatcatcaacaacaatatcacttagcaataaca 33538549  T
Q  175 acatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    ||||||||| |||| |||||| || | ||||||||||| |||||    
T  33538548 acatcaatt-aaacatgattctcatcacaattcaacaataacat 33538506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 25651242 - 25651347
Alignment:
Q  112 caatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaaca 211  Q
    |||||||||| | |||||||||||||||| | |||| | |||||| ||  || |||||||||||||||||||||| | ||| || || |  |||||||||    
T  25651242 caatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaa-catgaatctcatcataattcaaca 25651340  T
Q  212 acaacat 218  Q
    |||||||    
T  25651341 acaacat 25651347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 236
Target Start/End: Original strand, 34966823 - 34966995
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| || ||||||||||| |||| | || ||  || ||||||| | ||||||||||||| || | |||| | |||||| || |    
T  34966823 atcaacccattttcacaaaaccaacaacaacaacttattt-cacatcacgaactcatgatttatgaacacccaagctatgaatcatcaacaacaatatct 34966921  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 236  Q
    || | ||||||||||||||||| |||| |||||| || | ||| |||||||||||||  ||||| ||| ||||||    
T  34966922 cttaacaacaacaacatcaatt-aaacatgattctcatcacaaatcaacaacaacatagcataattcaacaatta 34966995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 29869970 - 29869886
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    ||||||||||||| ||||||||||| ||| |||| ||||||||| ||||| | ||| || |||| ||||| ||| |||||||||||    
T  29869970 caacaacaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcattaattaggcaaaatttcacaac 29869886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 29605406 - 29605560
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaat-catgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| || ||| ||||||| |||| ||||  | |||| |||||| | || |||||||| |||| | |||| | |||||| || |    
T  29605406 atcaacccatttttacaaaaccaacaagaacaacttattt-ctcattatcaattcatgatttatgcacacccaaaccatgaatcatcaacaacaatattt 29605504  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    || ||||||||||||||||||| || | ||||||||| |  ||||||||||||||||    
T  29605505 cttagcaacaacaacatcaatt-aagcatgattcacatcataattcaacaacaacat 29605560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 15005067 - 15005024
Alignment:
Q  202 caattcaacaacaacatgtcataagtcatcaattaagcataatt 245  Q
    |||||||||||||||||||||||| ||||||||| | |||||||    
T  15005067 caattcaacaacaacatgtcataattcatcaattgaacataatt 15005024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 22585707 - 22585664
Alignment:
Q  202 caattcaacaacaacatgtcataagtcatcaattaagcataatt 245  Q
    |||||||||||||||||||||||| || |||||| |||||||||    
T  22585707 caattcaacaacaacatgtcataattcttcaattgagcataatt 22585664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 22590538 - 22590495
Alignment:
Q  202 caattcaacaacaacatgtcataagtcatcaattaagcataatt 245  Q
    |||||||||||||||||||||||| || |||||| |||||||||    
T  22590538 caattcaacaacaacatgtcataattcttcaattgagcataatt 22590495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 186
Target Start/End: Original strand, 33324673 - 33324772
Alignment:
Q  87 caacaacaactcattttctcaacaacaat-catgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattga 185  Q
    |||||||||||||||| |||| || |||| |||||  | |||| ||||||||||| | |||| | |||||||||  || ||||| |||||||||||||||    
T  33324673 caacaacaactcattt-ctcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaataacaacatcaattga 33324771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 186
Target Start/End: Complemental strand, 35136279 - 35136180
Alignment:
Q  87 caacaacaactcattttctcaacaacaat-catgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattga 185  Q
    |||||||||||||||| |||| || |||| |||||  | |||| ||||||||||| | |||| | |||||||||  || ||||| |||||||||||||||    
T  35136279 caacaacaactcattt-ctcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaataacaacatcaattga 35136181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 37 - 272
Target Start/End: Original strand, 16105573 - 16105808
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  16105573 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacctaag 16105672  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 236  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16105673 ccataattcataatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 16105772  T
Q  237 agcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||||||||||||||||||||||||||||    
T  16105773 agcataatttcacaacaacccattttcatacattat 16105808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 37 - 272
Target Start/End: Complemental strand, 109158 - 108923
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  109158 acatcatcaaaatcaaacttcttctctatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaag 109059  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 236  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  109058 ccataattcataatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 108959  T
Q  237 agcataatttcacaacaacccattttcatacattat 272  Q
    |||||||||||||||||| |||||||||||||||||    
T  108958 agcataatttcacaacaatccattttcatacattat 108923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 72 - 272
Target Start/End: Complemental strand, 9730672 - 9730473
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| ||||  |||||||||||||| |||||||||||||||||| |||| | |||||| || |||||||||||    
T  9730672 atttcacaaaaccaccaacaacatcttattt-ctcacaaacaatcatgatatatgaacacccaagccataaatcataaacaacaatatgtctcagcaaca 9730574  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacatta 271  Q
    ||||||||||| |||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9730573 acaacatcaatcgaaacttgattctcaccttaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacatta 9730474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 109 - 268
Target Start/End: Original strand, 7528902 - 7529061
Alignment:
Q  109 caacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattca 208  Q
    ||||||||||||||| |||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  7528902 caacaatcatgatatatgaacacccaagtcataaatcataaacaacaacatatctcagcaacaacaacatcaattgaaacttgattctcacctcaattca 7529001  T
Q  209 acaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcataca 268  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  7529002 acaacaacatgtcataattcatcaattaagcataatttcacaactacccattttcataca 7529061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 101 - 272
Target Start/End: Original strand, 17909500 - 17909670
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    ||||||| || |||||||||||| ||||||||||||||||||| ||| | ||||||||| || || || |||||||||||||| ||||||||||| ||||    
T  17909500 tttctcaccaccaatcatgatatatgaacacccaagccataat-cataaacaacaacatgtcgcatcagcaacaacatcaattaaaacttgattctcacc 17909598  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     ||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||    
T  17909599 tcaattcaacaacaacatgtcacaattcatcaattaagcataatttcataacaacccattttcatacattat 17909670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 248
Target Start/End: Complemental strand, 10778259 - 10778085
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||| ||||| || |||| |||| ||||||| ||| ||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  10778259 atttcacaaaaccaccaccaacatcttattt-ctcatcaacaattatggtatatgaacacccaagccataaatcataatcaacaacatatctcagcaaca 10778161  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttca 248  Q
    |||||||||||| | |  ||||| ||| | || |||||  | ||||| ||| |  ||||||||||||||||||||||    
T  10778160 acaacatcaatt-acatatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttca 10778085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 11583982 - 11584063
Alignment:
Q  38 catcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatga 120  Q
    ||||||||||| ||||||||||| | ||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  11583982 catcatcaaaaacaaacttcttcatcatcaacccattttacaaaaccacgaacaacaactca-tttctcaacaacaatcatga 11584063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 183
Target Start/End: Original strand, 23514528 - 23514638
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| |||| ||| ||| ||| ||| |||||||||||||||||| |||| ||||||||||| |||||  ||||    
T  23514528 atttcacaaaaccaccaacaacatcttattt-ctcatcaataattatggtatatgaacacccaagccataaatcataatcaacaacatctctcaagaaca 23514626  T
Q  172 acaacatcaatt 183  Q
    ||||||||||||    
T  23514627 acaacatcaatt 23514638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 235
Target Start/End: Original strand, 7728378 - 7728547
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaat-catgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    |||||||||||| |||| |||||||||||| ||||| | |||| ||||||| |||||  | || |||||||||| |||| | || |||||||||||  ||    
T  7728378 tcaacccatttttcaaagtcaccaacaacacctcatct-ctcaccaacaattcatgaattatgcacacccaagcgataaattatcatcaacaacatcact 7728476  T
Q  164 cagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
     |||||||||||||||||||||| | ||| ||  | | |||||||||||||||||  ||||| ||| |||||    
T  7728477 tagcaacaacaacatcaattgaa-catgaatcttatcacaattcaacaacaacatagcataattcaacaatt 7728547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 24084034 - 24084187
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttc-tcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| || | ||||||||| |||||| ||| |||  |||||||| |   |||||||||||||| | || | | |||||| || |    
T  24084034 atcaacccatttttacaaaaccaaccacaacaacttattttcatcatcaa--atcatgatttactaacacccaagccatgaatcttcaacaacaatattt 24084131  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    || ||||||||||||||||||| |||| ||||||||| | |||||||||||||||||    
T  24084132 cttagcaacaacaacatcaatt-aaacatgattcacatcacaattcaacaacaacat 24084187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 218
Target Start/End: Original strand, 29917958 - 29918075
Alignment:
Q  101 tttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacac 199  Q
    |||||||||| ||| ||||||| | |||||||||||||||| | |||| | |||||| || ||| |||||||||||||||| || |||| |||||| ||     
T  29917958 tttctcaacatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttagcaacaacaacatcagtt-aaacatgattctcat 29918056  T
Q  200 cccaattcaacaacaacat 218  Q
    |  ||||||||||||||||    
T  29918057 cataattcaacaacaacat 29918075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 23493937 - 23494029
Alignment:
Q  125 tgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    |||||||||||||||| | |||| |||||||||||  || |||||||||||||||||||||| | ||| ||  | | |||||||||||||||||    
T  23493937 tgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaa-catgaatcttatcacaattcaacaacaacat 23494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 6456580 - 6456734
Alignment:
Q  64 atcaacccattt-tacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    |||||||| ||| ||||||| || ||||||||||| |||| |||| || ||| |||||||   |||||||||||||||| | |||| | |||| | || |    
T  6456580 atcaacccgtttgtacaaaaacaacaacaacaacttattt-ctcatcatcaaatcatgattcatgaacacccaagccatgaatcatcaacaacgatatct 6456678  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    || | ||||||||||||||||| |||| |||||| || | |||||||||||||||||    
T  6456679 cttaacaacaacaacatcaatt-aaacatgattctcatcacaattcaacaacaacat 6456734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 21616974 - 21617126
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    |||||||||||||||||| || | |||||| |||| || |||| || ||| ||||||  | |||||||||||||||| | |||  | |||||| ||  ||    
T  21616974 tcaacccattttacaaaaccaaccacaacagctcactt-ctcatcatcaaatcatgaattatgaacacccaagccatgaatcaacaacaacaatatcact 21617072  T
Q  164 cagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
     |||||||||||||||||||| ||| ||| || || | |||||||||||||||||    
T  21617073 tagcaacaacaacatcaattg-aacatgaatctcatcacaattcaacaacaacat 21617126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 24225634 - 24225596
Alignment:
Q  38 catcatcaaaatcaaacttcttctttatcaacccatttt 76  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  24225634 catcatcaaaatcaaacttcttcattatcaacccatttt 24225596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 32966436 - 32966399
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattt 102  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  32966436 tcaacccattttacaaagtcaccaacaacaactcattt 32966399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 225
Target Start/End: Complemental strand, 23981745 - 23981646
Alignment:
Q  125 tgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcata 224  Q
    |||||||||||||||| | |||| | |||||| ||  || |||||||||||||||||||||| | || ||| || |  |||||||||||||||| |||||    
T  23981745 tgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaa-catggttctcatcataattcaacaacaacatatcata 23981647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 37983325 - 37983474
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    |||||||||||||||||   ||||||||||||||||||| ||| || | |||| |||| | ||||||||||||| || | |||| | |||||| ||  ||    
T  37983325 tcaacccattttacaaa---accaacaacaactcatttt-tcatcatcaaatcctgatttatgaacacccaagctatgaatcatcaacaacaatatcact 37983420  T
Q  164 cagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
     | ||||||||||||||||| |||| |||||| ||   ||||||||||| |||||    
T  37983421 taacaacaacaacatcaatt-aaacatgattctcattacaattcaacaataacat 37983474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 1168495 - 1168373
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |  ||| ||||||||||| ||||||| ||||||||||| ||||||    || | ||||||||||| | | || |||||||||||      
T  1168495 atcaacccattttcatcaaaacaccaacaacatctcattt-ctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatga 1168397  T
Q  162 ctcagcaacaacaacatcaattga 185  Q
    || |||||||||||||||||||||    
T  1168396 cttagcaacaacaacatcaattga 1168373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 3673818 - 3673940
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| || ||| || ||||||||||| |||| |||| || ||| || |||| | |||||||||||||||| | |||| |||||| || |      
T  3673818 atcaacccattttcaccaaaccaacaacaacaacttattt-ctcatcatcaaatcgtgatttatgaacacccaagccatgaatcatcatcaaccacctcg 3673916  T
Q  162 ctcagcaacaacaacatcaattga 185  Q
    || |||||||||||||||||||||    
T  3673917 cttagcaacaacaacatcaattga 3673940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 235
Target Start/End: Complemental strand, 5451134 - 5450963
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| || ||| || ||||||||||| |||| |||| || ||| ||||||| | ||| || ||||||||  | |||| |||||||||||      
T  5451134 atcaacccattttcaccaaaccaacaacaacaacttattt-ctcatcatcaaatcatgatttatgatcatccaagccaagaatcatcatcaacaacatca 5451036  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    || |||||||||||||||| ||| ||| ||| |   | | |||||||||||||||||  ||||| |||||||||    
T  5451035 cttagcaacaacaacatcagttg-aacatgaattttatcacaattcaacaacaacatagcataattcatcaatt 5450963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 23328619 - 23328703
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    ||||||||||||| ||||||||||| ||| |||| |||| |||| ||||| | ||| || |||| ||||| ||| |||||||||||    
T  23328619 caacaacaacatccattgaaacttgtttctcacctcaatccaac-acaacttatcacaaatcattaattaggcaaaatttcacaac 23328703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 24616223 - 24616307
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    ||||||||||||| ||||||||||| ||| |||| |||| |||| ||||| | ||| || |||| ||||| ||| |||||||||||    
T  24616223 caacaacaacatccattgaaacttgtttctcacctcaatccaac-acaacttatcacaaatcattaattaggcaaaatttcacaac 24616307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 24712599 - 24712683
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    ||||||||||||| ||||||||||| ||| |||| |||| |||| ||||| | ||| || |||| ||||| ||| |||||||||||    
T  24712599 caacaacaacatccattgaaacttgtttctcacctcaatccaac-acaacttatcacaaatcattaattaggcaaaatttcacaac 24712683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 24745617 - 24745701
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    ||||||||||||| ||||||||||| ||| |||| |||| |||| ||||| | ||| || |||| ||||| ||| |||||||||||    
T  24745617 caacaacaacatccattgaaacttgtttctcacctcaatccaac-acaacttatcacaaatcattaattaggcaaaatttcacaac 24745701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 26560044 - 26559952
Alignment:
Q  125 tgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    |||||||||||||||  | |||| | |||||| || ||| ||||||||||||||||||| |||| | |||| || | ||| |||||||||||||    
T  26560044 tgaacacccaagccaagaatcatcaccaacaatatctcttagcaacaacaacatcaatt-aaacataattctcatcacaaatcaacaacaacat 26559952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 235
Target Start/End: Original strand, 19862186 - 19862336
Alignment:
Q  84 caccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaat 182  Q
    ||||||||||||||||||| |||| || ||| ||||||  | |||||||||||| ||| | |||| | ||| || ||  || ||||||||||||||||||    
T  19862186 caccaacaacaactcattt-ctcatcatcaaatcatgaattatgaacacccaagtcatgaatcatcaacaataatatcacttagcaacaacaacatcaat 19862284  T
Q  183 tgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    ||  || ||||||  | | |||||||||||||||||  ||||| ||| |||||    
T  19862285 tg-cacatgattcttatcacaattcaacaacaacatagcataattcaacaatt 19862336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 37 - 272
Target Start/End: Original strand, 16522748 - 16522983
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16522748 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaag 16522847  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 236  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16522848 ccataattcataatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacctcaattcaacaacaacatgtcataagtcatcaatta 16522947  T
Q  237 agcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||||||||||||||||||||||||||||    
T  16522948 agcataatttcacaacaacccattttcatacattat 16522983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 37 - 272
Target Start/End: Original strand, 9295624 - 9295859
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    ||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9295624 acatcatcaaaatcaaacttcttctttatcaactcattttacataaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaag 9295723  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 236  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9295724 ccataattcattatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 9295823  T
Q  237 agcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||||||||||||||||||||||||||||    
T  9295824 agcataatttcacaacaacccattttcatacattat 9295859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 101 - 272
Target Start/End: Original strand, 14996122 - 14996292
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||| | ||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  14996122 tttctcaccaacaatcatgatatatgaacacccaagccataat-cataaacaacaacatgtctcagcaacaacaacatcaattaaaacttgattctcacc 14996220  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14996221 tcaattcaacaacaacatgtcataattcatcaattaagcataatttcacaacaacccattttcatacattat 14996292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 101 - 272
Target Start/End: Original strand, 8044935 - 8045109
Alignment:
Q  101 tttctcaacaacaat-catgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacac 199  Q
    ||||||| ||||||| |||||||| |||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  8044935 tttctcatcaacaattcatgatatatgaacacccaagccataaatcataatcaacaacatatctcagcagcaacaacatcaattggaacttgattcacac 8045034  T
Q  200 ccc--aattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8045035 acctcaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattctcatacattat 8045109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 101 - 272
Target Start/End: Complemental strand, 19697633 - 19697463
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||| | ||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  19697633 tttctcaccaacaatcatgatatatgaacacccaagccataat-cataaacaacaacatgtctcagcaacaacaacatcaattaaaacttgattctcacc 19697535  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     |||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| |||||||||||    
T  19697534 tcaattcaacaacaacatgtcataattcatcaattaagcataatttcataacaactcattctcatacattat 19697463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 101 - 272
Target Start/End: Complemental strand, 19708218 - 19708048
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||| | ||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  19708218 tttctcaccaacaatcatgatatatgaacacccaagccataat-cataaacaacaacatgtctcagcaacaacaacatcaattaaaacttgattctcacc 19708120  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     |||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| |||||||||||    
T  19708119 tcaattcaacaacaacatgtcataattcatcaattaagcataatttcataacaactcattctcatacattat 19708048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 161 - 272
Target Start/End: Complemental strand, 14500418 - 14500307
Alignment:
Q  161 tctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccatt 260  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  14500418 tctcagcaacaacaacatcaattaaaacttgattctcacctcaattcaacaacaacatgtcataattcatcaattaagcataatttcacaactacccatt 14500319  T
Q  261 ttcatacattat 272  Q
    ||||||||||||    
T  14500318 ttcatacattat 14500307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 87 - 272
Target Start/End: Original strand, 9795195 - 9795381
Alignment:
Q  87 caacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatct---cagcaacaacaacatcaatt 183  Q
    ||||||||| |||||| |||||||||||||||||||| | |||||||||||||||| |||| | ||||||||| | |   || |||||||||||||||||    
T  9795195 caacaacaattcattt-ctcaacaacaatcatgatatatcaacacccaagccataa-tcataaacaacaacatgtatcaacaacaacaacaacatcaatt 9795292  T
Q  184 gaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
    |||||||||||  |||| |||||||||||||||||||||||| ||| ||||||| |||||||||||||| || |||||| | |||||||    
T  9795293 gaaacttgatttccacctcaattcaacaacaacatgtcataattcaccaattaaacataatttcacaactactcattttgacacattat 9795381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 7132342 - 7132244
Alignment:
Q  84 caccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaatt 183  Q
    ||||||||||| || |||| |||| ||||||| ||| ||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  7132342 caccaacaacatcttattt-ctcatcaacaattatggtatatgaacacccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatt 7132244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 22738293 - 22738414
Alignment:
Q  130 acccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtca 229  Q
    ||||||| |||||||||   |||||||||| ||| ||||||||||||||| |||| ||||||||||||| | |||||||| ||||||   ||||||  ||    
T  22738293 acccaagtcataattcaccctcaacaacatgtctaagcaacaacaacatccattggaacttgattcaca-ctcaattcaataacaactcatcataaacca 22738391  T
Q  230 tcaattaagcataatttcacaac 252  Q
    |||||||||||||||||||||||    
T  22738392 tcaattaagcataatttcacaac 22738414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 218
Target Start/End: Complemental strand, 7186159 - 7185981
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacaccca 134  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||   | ||||||||||||| | ||||| || | ||||||||| | | ||||||||    
T  7186159 acatcatcaaaatcaaacttcttcattatcaacccattttcacaaa---aacaacaacaactca-tatctcatcatcaaatcatgatttataaacaccca 7186064  T
Q  135 agccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    |||||| | |||| | ||| || || ||| ||||||||||||||||||| |||| ||| || || | |||||||||||||||||    
T  7186063 agccatgaatcatcaacaataatatctcttagcaacaacaacatcaatt-aaacatgaatctcatcacaattcaacaacaacat 7185981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 218
Target Start/End: Complemental strand, 7965000 - 7964848
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    |||||||||||||||||| || ||||||||||||| ||||||| || | ||||||||| | ||||||| |||||||| | |||| | |||||| ||  ||    
T  7965000 tcaacccattttacaaaaccaacaacaacaactca-tttctcatcatcaaatcatgatttatgaacactcaagccatgaatcatcaacaacaatatcact 7964902  T
Q  164 cagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
     ||||||||||| ||||||| |||| |||||| || |  ||||||||||||||||    
T  7964901 tagcaacaacaaaatcaatt-aaacatgattctcatcataattcaacaacaacat 7964848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 15044834 - 15044955
Alignment:
Q  113 aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaa 212  Q
    ||||||||| | |||||||||||||||| | |||| |||||||||||  || |||||||||||||||||||||| | ||| ||  | | |||||||||||    
T  15044834 aatcatgatttatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaa-catgaatcttatcacaattcaacaa 15044932  T
Q  213 caacatgtcataagtcatcaatt 235  Q
    ||||||  ||||| |||||||||    
T  15044933 caacatagcataattcatcaatt 15044955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 248
Target Start/End: Original strand, 20000690 - 20000864
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| |||||| |||| || |||| |||| ||||||| ||| ||| ||||||||||||||  || ||||  ||||||||||||||||||||||    
T  20000690 atttcacaaaaccaccaataacatcttattt-ctcatcaacaattatggtatatgaacacccaagcctcaaatcatactcaacaacatatctcagcaaca 20000788  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttca 248  Q
    |||||||| ||| | |  ||||| ||| | || |||||| | ||||| ||| |  |||||||||||| |||||||||    
T  20000789 acaacatcgatt-acatatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataatttca 20000864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 218
Target Start/End: Complemental strand, 40905214 - 40905071
Alignment:
Q  73 ttttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||||||||| || ||||||||||| |||| |||| || ||| ||||||| | |||||||||||||||  | |||| | |||||| || ||| |||||||    
T  40905214 ttttacaaaaccaacaacaacaacttattt-ctcatcatcaaatcatgatttatgaacacccaagccacgagtcatcaacaacaatatctcttagcaaca 40905116  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    ||||||||||||  ||| |||||| || | |||||||||||||||||    
T  40905115 acaacatcaatt--aacatgattctcatcacaattcaacaacaacat 40905071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 15109590 - 15109469
Alignment:
Q  113 aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaa 212  Q
    ||||||||| | |||||||||||||||| | |||| |||||||||||  || |||||||||||||||||||||| | ||| ||  | | |||||||||||    
T  15109590 aatcatgatttatgaacacccaagccatgaatcatcatcaacaacattacttagcaacaacaacatcaattgaa-catgaatcttatcacaattcaacaa 15109492  T
Q  213 caacatgtcataagtcatcaatt 235  Q
    ||||||  ||||| | |||||||    
T  15109491 caacatagcataatttatcaatt 15109469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 19822065 - 19821944
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    ||||| ||||||||||| ||||||| |||||||||||| |||| |||||| ||||||  | |||| ||||||||||| | |||| | |||||||||  |     
T  19822065 tcaactcattttacaaagtcaccaaaaacaactcattt-ctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcaca 19821967  T
Q  164 cagcaacaacaacatcaattgaa 186  Q
     ||||||||||||||||||||||    
T  19821966 tagcaacaacaacatcaattgaa 19821944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 235
Target Start/End: Complemental strand, 41166228 - 41166066
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaac 170  Q
    |||| |||||| |||| |||||||||||||| |||| |||||| |||| |  | |||| ||||||||||| |||||| | |||||||||  || ||||||    
T  41166228 atttcacaaaaccacccacaacaactcattt-ctcatcaacaaatcataagttatgaatacccaagccatgattcatcaacaacaacatcacttagcaac 41166130  T
Q  171 aacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    |||||||||||||||| | ||| ||   || |||||||||||||||||  ||||| ||| |||||    
T  41166129 aacaacatcaattgaa-catgactcttgccacaattcaacaacaacatagcataattcaacaatt 41166066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 32460890 - 32460840
Alignment:
Q  168 aacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    |||||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  32460890 aacaacaacatcaattgaaacttgattctcacctcaatccaacaacaacat 32460840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 216
Target Start/End: Complemental strand, 41256660 - 41256508
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| | |||| || |||||||||||||||| |||| || ||| ||||||| | ||||||||||| |||| | |||| | |||||| || |    
T  41256660 atcaacccatttttataaaaccaacaacaacaactcattt-ctcatcatcaaatcatgatttatgaacacccaaaccatgaatcatcaacaacaatatct 41256562  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaac 216  Q
    || | ||||||||||||||||| |||| || ||| || | |||||||||||||||    
T  41256561 cttaacaacaacaacatcaatt-aaacatggttctcatcacaattcaacaacaac 41256508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 15013523 - 15013421
Alignment:
Q  113 aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaa 212  Q
    ||||||||| | |||||||||||||||| | |||| | |||||| || ||| | ||||||||| ||||||| |||| |||||| || | |||||||||||    
T  15013523 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaacaatatcaatt-aaacatgattctcatcacaattcaacaa 15013425  T
Q  213 caac 216  Q
    ||||    
T  15013424 caac 15013421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 218
Target Start/End: Complemental strand, 18238396 - 18238294
Alignment:
Q  115 tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaaca 214  Q
    ||||||| | ||||||||||||| || | |||| | |||||| || ||| | ||||||||||||||||| |||| |||||| || | |||||||||||||    
T  18238396 tcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt-aaacatgattctcatcacaattcaacaaca 18238298  T
Q  215 acat 218  Q
    ||||    
T  18238297 acat 18238294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 215
Target Start/End: Original strand, 18276392 - 18276541
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    |||||||||||||||||| || ||||||||||||| |  |||| |  ||| ||||||| | |||||||||||||||| | |||| | |||||| ||  ||    
T  18276392 tcaacccattttacaaaaccaacaacaacaactcaata-ctcatcgtcaaatcatgatttatgaacacccaagccatcaatcatcaacaacaatatcact 18276490  T
Q  164 cagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaa 215  Q
      ||||||||||||||||||| ||| ||| || || | ||||||||||||||    
T  18276491 ttgcaacaacaacatcaattg-aacatgaatctcatcacaattcaacaacaa 18276541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 26339081 - 26339165
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    ||||||||||||| ||||||||||| ||| | || ||||||||| ||||| | ||| || |||| ||||||||| |||||||||||    
T  26339081 caacaacaacatccattgaaacttgtttctctcctcaattcaac-acaacttatcacaaatcattaattaagcaaaatttcacaac 26339165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 37957314 - 37957277
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattt 102  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  37957314 tcaacccattttacaaagtcaccaacaacaactcattt 37957277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 54398403 - 54398493
Alignment:
Q  127 aacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    |||||||||||||| | |||| | |||||| || ||| | ||||||||||||||||| |||| |||||| || | ||| |||||||||||||    
T  54398403 aacacccaagccatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt-aaacatgattctcatcacaaatcaacaacaacat 54398493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 159
Target Start/End: Complemental strand, 32460953 - 32460880
Alignment:
Q  85 accaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacat 159  Q
    |||||||||| |||| || |||| ||||||||||||||| || ||||||||| ||||| |||| | |||||||||    
T  32460953 accaacaacatctcaatt-ctcaccaacaatcatgatatatgcacacccaagtcataaatcataaacaacaacat 32460880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 38764715 - 38764836
Alignment:
Q  113 aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaa 212  Q
    ||||||||| | |||||||||||||||| | |||| | |||||| ||  || | ||||||||||||||||| |||| |||||| || |  |||| |||||    
T  38764715 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatattccttaacaacaacaacatcaatt-aaacatgattctcatcataattgaacaa 38764813  T
Q  213 caacatgtcataagtcatcaatt 235  Q
    ||||||  ||||| ||| |||||    
T  38764814 caacatcgcataattcaacaatt 38764836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 22352241 - 22352197
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaaca 211  Q
    ||||||||||||| ||||||||||| ||| |||| ||||||||||    
T  22352241 caacaacaacatccattgaaacttgtttctcacctcaattcaaca 22352197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 32460838 - 32460798
Alignment:
Q  232 aattaagcataatttcacaacaacccattttcatacattat 272  Q
    |||||| |||||||||||||| |||| ||||||||||||||    
T  32460838 aattaaccataatttcacaactaccccttttcatacattat 32460798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 216; Significance: 1e-119; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 37 - 272
Target Start/End: Original strand, 130486 - 130721
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  130486 acatcatcaaaatcaaacttcttctttattaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaag 130585  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 236  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  130586 ccataattcataatcaacaacatatctcaacaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 130685  T
Q  237 agcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||||||||||||||||||||||||||||    
T  130686 agcataatttcacaacaacccattttcatacattat 130721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 79519 - 79677
Alignment:
Q  87 caacaacaactcattttctcaacaacaat-catgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattga 185  Q
    |||||||||||||||| |||| || |||| |||||  | |||| ||||||||||| | |||| | ||| || ||  || ||||||||||||||||||||     
T  79519 caacaacaactcattt-ctcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaataatatcacttagcaacaacaacatcaattg- 79616  T
Q  186 aacttgattcacaccccaattcaacaacaacatgtcataagtc-atcaattaagcataatt 245  Q
    ||| || |||||| |  |||||||||||||||| |||||| || | |||||||||||||||    
T  79617 aacatggttcacatcataattcaacaacaacatatcataattcaaccaattaagcataatt 79677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 37 - 272
Target Start/End: Original strand, 25212977 - 25213213
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcatttt-ctcaacaacaatcatgatatgtgaacacccaa 135  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||||||    
T  25212977 acatcatcaaaatcaaatttcttctttatcaacccattttacaaaaccaccaccaacaactcatttttctcaacaacaatcatgatatatgaacacccaa 25213076  T
Q  136 gccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25213077 gccataattcattatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 25213176  T
Q  236 aagcataatttcacaacaacccattttcatacattat 272  Q
    |||||||||||||||||||||||||||||||||||||    
T  25213177 aagcataatttcacaacaacccattttcatacattat 25213213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 37 - 272
Target Start/End: Complemental strand, 24827044 - 24826809
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||  ||| ||||||||    
T  24827044 acatcatcaatatcaaacttcttctttatcaacccattttacaaaaccaccaacaacagctcattttctcaacaacaatcatgataaatgagcacccaag 24826945  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 236  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24826944 ccataattcataatcaacaacgtatctcagcaacaacaacatcaattgaaacttgattcacacctcaattcaacaacaacatgtcataagtcatcaatta 24826845  T
Q  237 agcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||||||||||||||||||||||||||||    
T  24826844 agcataatttcacaacaacccattttcatacattat 24826809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 85 - 272
Target Start/End: Original strand, 17204309 - 17204496
Alignment:
Q  85 accaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattg 184  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||   |||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  17204309 accaacaacatctcattttctcaacaacaatcatgatatatgaacatataagccataattcataatcaacaatatatctcagcaacaacaacatcaattg 17204408  T
Q  185 aaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17204409 aaacttgattcacacctcaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 17204496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 85 - 272
Target Start/End: Complemental strand, 28031516 - 28031329
Alignment:
Q  85 accaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattg 184  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||| | ||||||||||||||| ||||||||||||||||||    
T  28031516 accaacaacatctcattttctcatcaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatatctcaacaacaacaacatcaattg 28031417  T
Q  185 aaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||| |||| ||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  28031416 aaacttgattctcacctcaattcaacaacaacatatcataattcatcaattaagcataatttcacaactacccattttcacacattat 28031329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 101 - 272
Target Start/End: Original strand, 15633208 - 15633378
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    |||||||  |||||||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  15633208 tttctcactaacaatcatgatatatgaacacccaagccataaatcat-agcaacaacatatctcagcaacaacaacatcaattgaaacttgtttctcacc 15633306  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  15633307 tcaattcaacaacaacatgtcataattcatcaattaagcataatttcacaactacccattttcaaacattat 15633378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 37 - 235
Target Start/End: Complemental strand, 19433649 - 19433452
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaa 135  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||| |||| ||||||||  | |||||||||||    
T  19433649 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactca-tttctcatcaacaaatcatgaattatgaacacccaa 19433551  T
Q  136 gccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    ||||| | |||| | |||||| || ||| |||||||||||||||||||| ||| ||||||  ||  |||||||| ||||||||  ||||| ||| |||||    
T  19433550 gccatgaatcatcaacaacaatatctcttagcaacaacaacatcaattg-aacatgattcttacaacaattcaataacaacatagcataattcaacaatt 19433452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 129 - 272
Target Start/End: Original strand, 33128067 - 33128209
Alignment:
Q  129 cacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtc 228  Q
    |||||||||||| | |||| | |||||| || ||| | | ||||||| ||||||| |||| |||||| || | |||||||||||||||||||||||||||    
T  33128067 cacccaagccatgaatcattaacaacaatatctcttaaccacaacaatatcaatt-aaacatgattctcatcacaattcaacaacaacatgtcataagtc 33128165  T
Q  229 atcaattaagcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  33128166 atcaattaagcataatttcacaacaacccattttcatacattat 33128209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 3529 - 3409
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctc 164  Q
    ||||||||||||||||| |||||||||||||||||||| |||| | ||||||||||  | |||||||||||||||| | |||| |||||||||||  ||     
T  3529 tcaacccattttacaaagtcaccaacaacaactcattt-ctcatctacaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcactt 3431  T
Q  165 agcaacaacaacatcaattgaa 186  Q
    ||||||||||||||||||||||    
T  3430 agcaacaacaacatcaattgaa 3409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 12636157 - 12636047
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| |||| ||||||| ||| ||| ||||||||||| |||||| |||| |||||||||||||||||||||||    
T  12636157 atttcacaaaaccaccaacaacatcttattt-ctcatcaacaattatggtatatgaacacccaatccataaatcataatcaacaacatatctcagcaaca 12636059  T
Q  172 acaacatcaatt 183  Q
    ||||||||||||    
T  12636058 acaacatcaatt 12636047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 42178258 - 42178148
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| |||| |||||||  || ||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  42178258 atttcacaaaaccaccaacaacatcttattt-ctcatcaacaattttggtatatgaacacccaagccataagtcataatcaacaacatatctcagcaaca 42178160  T
Q  172 acaacatcaatt 183  Q
    ||||||||||||    
T  42178159 acaacatcaatt 42178148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 72 - 248
Target Start/End: Complemental strand, 12641931 - 12641757
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| |||| ||||| | ||| ||| |||||||||||||||||| ||||  ||||||||||||||||||||||    
T  12641931 atttcacaaaaccaccaacaacatcttattt-ctcatcaacacttatggtatatgaacacccaagccataaatcatactcaacaacatatctcagcaaca 12641833  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttca 248  Q
    |||||||||||| | |  ||||| ||| | || |||||| | ||||| ||| |  |||||||||||| |||||||||    
T  12641832 acaacatcaatt-acatatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataatttca 12641757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 72 - 183
Target Start/End: Original strand, 8943813 - 8943923
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| ||||  |||||| ||| ||| ||||||||||| |||||| |||| |||||||||||||||||||||||    
T  8943813 atttcacaaaaccaccaacaacatcttattt-ctcattaacaattatggtatatgaacacccaatccataaatcataatcaacaacatatctcagcaaca 8943911  T
Q  172 acaacatcaatt 183  Q
    ||||||||||||    
T  8943912 acaacatcaatt 8943923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 235
Target Start/End: Original strand, 43645824 - 43646020
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||| ||||| ||||||||||   |  || ||  ||||||||  | ||||||||||||    
T  43645824 acatcatcaaaatcaaactttttcattaccaacccattttacaaaaccaccaccaacaactca-aatgacatcacaaatcatgaattatgaacacccaag 43645922  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
     ||| | ||||   |||||||||  || |||||||||||||||||||| ||| ||||||  ||| || ||||||||||||||  ||||| ||| |||||    
T  43645923 tcatgaatcatcgacaacaacatcacttagcaacaacaacatcaattg-aacatgattcttaccacagttcaacaacaacatagcataattcaacaatt 43646020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 248
Target Start/End: Complemental strand, 3798892 - 3798718
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| |||||| |||| || |||| |||| ||||||| ||| ||| ||||||||||||||  || ||||  ||||||||||||||||||||||    
T  3798892 atttcacaaaaccaccaataacatcttattt-ctcatcaacaattatggtatatgaacacccaagcctcaaatcatactcaacaacatatctcagcaaca 3798794  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttca 248  Q
    |||||||||||| | |  ||||| ||| | || |||||| | ||||| ||| |  |||||||||||| |||||||||    
T  3798793 acaacatcaatt-acatatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataatttca 3798718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 24884643 - 24884796
Alignment:
Q  64 atcaacccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatc 162  Q
    ||||||||||||||||||| || ||||||||||||| ||||||  || | ||||||||| | |||||||||||| ||| | |||| | |||||| || |     
T  24884643 atcaacccattttacaaaaccaacaacaacaactca-tttctcctcatcaaatcatgatttatgaacacccaagtcatgaatcatcaacaacaatatcta 24884741  T
Q  163 tcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    | ||||||||||||||||||| |||| ||| || || | ||||||||||| |||||    
T  24884742 ttagcaacaacaacatcaatt-aaacatgaatctcatcacaattcaacaataacat 24884796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 5888824 - 5888740
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    ||||||||||||| ||||||||||| ||| |||| ||||||||| ||||| | ||| || |||| ||||| ||| |||||||||||    
T  5888824 caacaacaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcattaattaggcaaaatttcacaac 5888740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 241
Target Start/End: Complemental strand, 19669338 - 19669222
Alignment:
Q  125 tgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcata 224  Q
    |||| ||||||||||| | |||| | ||| |||||  || |||||||||||||||||||| ||| || |||||| |  |||||||||||||||| |||||    
T  19669338 tgaatacccaagccatgaatcatcaacaataacatcacttagcaacaacaacatcaattg-aacatggttcacatcataattcaacaacaacatatcata 19669240  T
Q  225 agtc-atcaattaagcat 241  Q
    | || | |||||||||||    
T  19669239 attcaaccaattaagcat 19669222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 25305423 - 25305524
Alignment:
Q  85 accaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaatt 183  Q
    |||||||||||||||||| |||| |||||| ||||||  | |||| ||||| ||||| | |||| | |||||||||  || ||| |||||||||||||||    
T  25305423 accaacaacaactcattt-ctcatcaacaaatcatgaattatgaatacccaggccatgaatcatcaacaacaacatcacttagccacaacaacatcaatt 25305521  T
Q  184 gaa 186  Q
    |||    
T  25305522 gaa 25305524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 235
Target Start/End: Original strand, 67952 - 68119
Alignment:
Q  68 acccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctca 165  Q
    ||||||||| |||||| || ||||||||||| |||| |||| || ||| ||||||  | ||||||| |||||||| | |||  | |||||| ||  || |    
T  67952 acccattttcacaaaaccaacaacaacaacttattt-ctcatcatcaaatcatgaattatgaacacgcaagccatgaatcaccaacaacaatatcactta 68050  T
Q  166 gcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    ||||||||||||||||||| ||| ||| ||  ||| |||||||||||||||||  ||||| ||| |||||    
T  68051 gcaacaacaacatcaattg-aacatgaatcttaccacaattcaacaacaacatagcataattcaacaatt 68119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 23774198 - 23774282
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    ||||||||||||| ||||||||||| ||| |||| |||| |||| ||||| | ||| || |||| ||||| ||| |||||||||||    
T  23774198 caacaacaacatccattgaaacttgtttctcacctcaatccaac-acaacttatcacaaatcattaattaggcaaaatttcacaac 23774282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 37 - 272
Target Start/End: Complemental strand, 9303425 - 9303190
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  9303425 acatcatcaaaatcaaacttcttctttatcaacccgttttacaaaaccaccaacaacaactcattttctcaacaacaatcatggtatatgaacacccaag 9303326  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 236  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9303325 ccataattcatagtcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacagcaacatgtcataagtcatcaatta 9303226  T
Q  237 agcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||||||||||||||||||||||||||||    
T  9303225 agcataatttcacaacaacccattttcatacattat 9303190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 37 - 272
Target Start/End: Original strand, 19946629 - 19946863
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    ||||||||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    || | |||||||    
T  19946629 acatcatcaaaatcaaacttctatattatcaacccattttacaaaaccaccaacaacaactcattt-ctcaacaacaatcatgaatcatgcaaacccaag 19946727  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatta 236  Q
    ||||   | || |||||||||||  |  | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  19946728 ccatggattatcatcaacaacatgacatatcaacaacaacatcaattgaaacttgattcacacctcaattcaacaacaacatgtcataaatcatcaatta 19946827  T
Q  237 agcataatttcacaacaacccattttcatacattat 272  Q
    |||||||||||||||| || ||||||||||||||||    
T  19946828 agcataatttcacaactactcattttcatacattat 19946863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 72 - 272
Target Start/End: Complemental strand, 16934263 - 16934064
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| ||||  |||||||||||| | |||| ||||||||||||| |||| | ||||||||| |||||||||||    
T  16934263 atttcacaaaaccaccaacaacatcttattt-ctcacaaacaatcatgatttatgaatacccaagccataaatcataaacaacaacatgtctcagcaaca 16934165  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacatta 271  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16934164 acaacatcaattgaaacttgattctcaccttaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacatta 16934065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 85 - 272
Target Start/End: Complemental strand, 11477467 - 11477281
Alignment:
Q  85 accaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattg 184  Q
    |||||||||| || ||||| ||| ||||||||||||||| |||||||||||||||||| |||| | |||||||||||||||||| |||||||||||||||    
T  11477467 accaacaacatcttatttt-tcatcaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatatctcagcagcaacaacatcaattg 11477369  T
Q  185 aaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||| |||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  11477368 aaacttgattctcacctcaattcaaccacaacatgtcataattcatcaattaagcataatttcacaacaacccattttcatgcattat 11477281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 101 - 272
Target Start/End: Complemental strand, 8276105 - 8275935
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||    
T  8276105 tttctcaccaacaatcatgatatatgaacacccaagccataat-cataaacaacaacatgtctcagcaacaataacatcaattaaaacttgattctcacc 8276007  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  8276006 tcaattcaacaacaacatgtcataattcatcaattaagcataatttcataacaacccattttcatacattat 8275935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 101 - 272
Target Start/End: Complemental strand, 8269005 - 8268835
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||    
T  8269005 tttctcaccaacaatcatgatatatgaacacccaagccataat-cataaacaacaacatgtctcagcaacaataacatcaattaaaacttgattctcacc 8268907  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     |||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||    
T  8268906 tcaattcaacaacaacatgtcataattcatcaattaagcataatttcataacaaccaattttcatacattat 8268835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 109 - 268
Target Start/End: Original strand, 14284963 - 14285122
Alignment:
Q  109 caacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattca 208  Q
    ||||| ||||||||| |||||||||||| ||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||    
T  14284963 caacattcatgatatatgaacacccaagtcataaatcataaacaacaacatatctgagcaacaacaacatcaattgaaacttgattctcacctcaattca 14285062  T
Q  209 acaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcataca 268  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||    
T  14285063 acaacaacatgtcataattcatcaattaagcatattttcacaactacccattttcataca 14285122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 186
Target Start/End: Complemental strand, 47785064 - 47784915
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaa 135  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||| |||| ||||||||  | |||||||||||    
T  47785064 acatcatcaaaatcaaacttcttcattatcaacccattttacagaatcaccaacaacaactca-tttctcaccaacaaatcatgaattatgaacacccaa 47784966  T
Q  136 gccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaa 186  Q
    ||||| | |||| | |||||||||  || | ||||||||||||||| ||||    
T  47784965 gccatgaatcattaacaacaacatcacttaacaacaacaacatcaactgaa 47784915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 7853913 - 7853996
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgat 121  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  7853913 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactca-tttctcaacaacaatcatgat 7853996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 72 - 183
Target Start/End: Original strand, 18910960 - 18911070
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| |||| ||||||| ||| ||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  18910960 atttcacaaaaccaccaacaacatcttattt-ctcatcaacaattatggtatatgaacacccaagccataaatcataatcaacaacatatctcagcaaca 18911058  T
Q  172 acaacatcaatt 183  Q
    ||||||||||||    
T  18911059 acaacatcaatt 18911070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 33341812 - 33341894
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatga 120  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  33341812 acataatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactca-tttctcaacaacaatcatga 33341894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 54685625 - 54685543
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatga 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| || ||||| ||||||| ||||||||||||||||||||    
T  54685625 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaacagcaactca-tttctcaacaacaatcatga 54685543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 12952920 - 12953074
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| || |||||||||||||||| |||| || ||| ||||||| | |||||||||||||||| | |||| | |||||| || |    
T  12952920 atcaacccatttttacaaaaccaacaacaacaactcattt-ctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatct 12953018  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    || ||||||||||||||||||| |||| | | || || | |||||||||||||||||    
T  12953019 cttagcaacaacaacatcaatt-aaacataaatctcatcacaattcaacaacaacat 12953074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 38811297 - 38811176
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaat-catgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    ||||||||||||||||| |||||||||||||||||||| || | || |||  |||||  | || ||||||||||||| | |||| |||||||||||  ||    
T  38811297 tcaacccattttacaaagtcaccaacaacaactcattt-ctgatcatcaaaacatgaattatgcacacccaagccatgaatcatcatcaacaacatcact 38811199  T
Q  164 cagcaacaacaacatcaattgaa 186  Q
     ||||||||||||||||||||||    
T  38811198 tagcaacaacaacatcaattgaa 38811176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 1990759 - 1990913
Alignment:
Q  64 atcaacccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaac-acccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| || | ||||||||| | ||||| | ||||||||| | |||| | |||||| || |    
T  1990759 atcaacccattttacaaaaccaccaacaacaactca-tttctcatcatcaaatcatgatttatgaacaaaccaagccatgaatcatcaacaacaatatct 1990857  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    || | ||||||||||||| ||| |||| |||||| || | || ||||||||||||||    
T  1990858 cttaacaacaacaacatc-atttaaacatgattctcatcacagttcaacaacaacat 1990913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 218
Target Start/End: Complemental strand, 6228916 - 6228762
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| || ||||||||||| |  |||||| || | ||||||||| | |||||||||||||||| | |||| | |||||| || |    
T  6228916 atcaacccatttttacaaaaccaacaacaacaactta-attctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatattt 6228818  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    || ||||||||||||||||||| |||| |||| |||| |  ||||| ||||||||||    
T  6228817 cttagcaacaacaacatcaatt-aaacatgatccacatcataattcgacaacaacat 6228762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 17191519 - 17191668
Alignment:
Q  85 accaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaatt 183  Q
    |||| ||||||||||||| |||| |||||| ||||||  | ||||||| |||||||| | |||| | |||||||||  || ||||||| |||||||||||    
T  17191519 accaccaacaactcattt-ctcatcaacaaatcatgaattatgaacactcaagccatgaatcatcaacaacaacattacttagcaacagcaacatcaatt 17191617  T
Q  184 gaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
     |||| ||||||  | | ||||||| |||||||||  ||||| |||||||||    
T  17191618 -aaacatgattcttatcacaattcagcaacaacataacataattcatcaatt 17191668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 18970016 - 18970082
Alignment:
Q  203 aattcaacaacaacatgtcataagtcatcaattaagcataatttcac-aacaacccattttcatacat 269  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||| ||| |||||||| |||||||    
T  18970016 aattcaacaacaacatgtcataattcatcaattgagcataa-ttcacaaactacccatttacatacat 18970082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 12488955 - 12488846
Alignment:
Q  125 tgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcata 224  Q
    |||||||||||||||| | | || |||||||||||  || |||||||||||||||||||| | | ||| ||  | | |||||||||||||||||  ||||    
T  12488955 tgaacacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattg-atcatgaatcttatcacaattcaacaacaacataacata 12488857  T
Q  225 agtcatcaatt 235  Q
    | |||||||||    
T  12488856 attcatcaatt 12488846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 215
Target Start/End: Original strand, 17204667 - 17204807
Alignment:
Q  74 tttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaa 172  Q
    ||||||||| ||| |||||||||||| ||||||| |||| ||||||||  | | |||||||||||||| | |||| | |||||| ||  || ||||||||    
T  17204667 tttacaaaaccactaacaacaactca-tttctcatcaacaaatcatgaattataaacacccaagccatgaatcatcaacaacaatattacttagcaacaa 17204765  T
Q  173 caacatcaattgaaacttgattcacaccccaattcaacaacaa 215  Q
    ||||||| ||| |||| ||||||  | | ||||||||||||||    
T  17204766 caacatccatt-aaacatgattcctatcacaattcaacaacaa 17204807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 182
Target Start/End: Original strand, 34559857 - 34559974
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    |||||||||||||||||| || |||||||||||||  |||||| || | ||| ||||| | ||||||| |||||||| | |||| | |||||| ||  ||    
T  34559857 tcaacccattttacaaaaccaacaacaacaactca-attctcatcatcaaattatgatttatgaacactcaagccatgaatcatcaacaacaatatcact 34559955  T
Q  164 cagcaacaacaacatcaat 182  Q
     ||||||||||||||||||    
T  34559956 tagcaacaacaacatcaat 34559974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 4162446 - 4162342
Alignment:
Q  113 aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaa 212  Q
    ||||||||| | |||||||||||||||| | |||| | |||||| |  ||| ||||||||||||||||||| |||| ||||||||  |   |||||||||    
T  4162446 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatagttcttagcaacaacaacatcaatt-aaacatgattcacgtcatcattcaacaa 4162348  T
Q  213 caacat 218  Q
    ||||||    
T  4162347 caacat 4162342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 17960602 - 17960565
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattt 102  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17960602 tcaacccattttacaaagtcaccaacaacaactcattt 17960565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 218
Target Start/End: Original strand, 41661573 - 41661675
Alignment:
Q  115 tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaaca 214  Q
    ||||||| | ||||||| ||||| || | |||| | |||||| || ||||| ||||||||||||||||| |||| |||||| || | ||||||||||| |    
T  41661573 tcatgatttatgaacactcaagctatgaatcatcaacaacaatatctctcaacaacaacaacatcaatt-aaacatgattctcatcacaattcaacaata 41661671  T
Q  215 acat 218  Q
    ||||    
T  41661672 acat 41661675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 9591035 - 9590922
Alignment:
Q  73 ttttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||||||||| || |||||||||||||||| |||| || ||| ||||||  | |||||||||||| ||| | |||| | |||||| ||  || | |||||    
T  9591035 ttttacaaaaccaacaacaacaactcattt-ctcatcatcaaatcatgaactatgaacacccaagtcatgaatcatcaacaacaatatcacttaacaaca 9590937  T
Q  172 acaacatcaattgaa 186  Q
    |||||||||||||||    
T  9590936 acaacatcaattgaa 9590922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 31412572 - 31412451
Alignment:
Q  115 tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaaca 214  Q
    ||||||| | ||||||| ||||| || | |||| | |||||| || ||| | ||||||||||||||||| |||| | |||| || | |||||||||||||    
T  31412572 tcatgatttatgaacactcaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt-aaacctaattctcatcacaattcaacaaca 31412474  T
Q  215 acatgtcataagtcatcaattaa 237  Q
    |||| ||| || ||| |||||||    
T  31412473 acatatcacaattcaacaattaa 31412451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 51961378 - 51961308
Alignment:
Q  113 aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaatt 183  Q
    ||||||||| ||||||||||||| |||| | |||| | ||||||||| ||  | |||||||||||||||||    
T  51961378 aatcatgatttgtgaacacccaaaccatgaatcatcaacaacaacatctcatatcaacaacaacatcaatt 51961308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 3576705 - 3576558
Alignment:
Q  87 caacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattga 185  Q
    |||||||||||||||| |||| |||||| ||||||  | |||||||||||||||| | |||| | | |||| ||  || ||||||||||||||||| | |    
T  3576705 caacaacaactcattt-ctcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaaccacaatattacttagcaacaacaacatcaa-tca 3576608  T
Q  186 aacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    ||| ||| ||  | | |||||||||||||||||  |||||  ||||||||    
T  3576607 aacatgactcttatcacaattcaacaacaacatagcataatccatcaatt 3576558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 144; Significance: 9e-76; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 101 - 272
Target Start/End: Complemental strand, 6477 - 6306
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    ||||||| ||||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6477 tttctcatcaacaattatgatatatgaacacccaagccataaatcataatcaacaacatatctcagcatcaacaacatcaattgaaacttgattcacacc 6378  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6377 ccaattcaacaacaacatgtcataagtcatcaattaagcttaatttcacaacaacccattttcatacattat 6306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 3e-69; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 72 - 272
Target Start/End: Complemental strand, 21650329 - 21650130
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| ||||  |||||||||||||| |||||||||||||||||| |||| | ||||||||| ||||| |||||    
T  21650329 atttcacaaaaccaccaacaacatcttattt-ctcacaaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatgtctcaacaaca 21650231  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacatta 271  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21650230 acaacatcaattgaaacttgattctcaccttaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacatta 21650131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 130 - 272
Target Start/End: Original strand, 20254336 - 20254478
Alignment:
Q  130 acccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtca 229  Q
    ||||||| |||||||||    ||||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| || |||    
T  20254336 acccaagtcataattcacccacaacaacatgtctcagcaacaacaacatcaattaaaacttgattctcacctcaattcaacaacaacatgtcacaattca 20254435  T
Q  230 tcaattaagcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  20254436 tcaattaagcataatttcataacaactcattttcatacattat 20254478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 72 - 183
Target Start/End: Original strand, 17148534 - 17148644
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||| ||||| || |||| |||| ||||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  17148534 atttcacaaaaccaccaccaacatcttattt-ctcatcaacaattatgatatatgaacacccaagccataaatcataatcaacaacatatctcagcaaca 17148632  T
Q  172 acaacatcaatt 183  Q
    ||||||||||||    
T  17148633 acaacatcaatt 17148644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 235
Target Start/End: Original strand, 20177140 - 20177302
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaac 170  Q
    |||| |||||| ||||||||||||||||||| |||  |||||| ||||||  | |||| | ||||||||| | |||| |||||||||||  || ||||||    
T  20177140 atttcacaaaaccaccaacaacaactcattt-ctcttcaacaaatcatgaattatgaatatccaagccatgaatcatcatcaacaacatcacttagcaac 20177238  T
Q  171 aacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    |||||||||||||| ||||||| |   ||| |||||||||||||||||  ||||| ||| |||||    
T  20177239 aacaacatcaattg-aacttgacttttaccacaattcaacaacaacatagcataattcaacaatt 20177302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 216
Target Start/End: Original strand, 21194980 - 21195122
Alignment:
Q  73 ttttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    ||||| |||| || |||||||||||||||| |||| || ||| ||||||| | |||||||||||||||| | |||| | |||||| || ||| | |||||    
T  21194980 ttttataaaaccaacaacaacaactcattt-ctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttaacaaca 21195078  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaac 216  Q
    ||||||| |||| |||| |||||| || | |||||||||||||||    
T  21195079 acaacattaatt-aaacatgattctcatcacaattcaacaacaac 21195122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 27674755 - 27674829
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccat 140  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||||  | || |||||||||||||    
T  27674755 tcaacccattttacaaagtcaccaacaacaactca-tttctcatcaaaaatcatgaattatgcacacccaagccat 27674829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 36356522 - 36356461
Alignment:
Q  125 tgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaa 186  Q
    |||||||||||||||||| |||| |||||||||||  || || |||||||||||||||||||    
T  36356522 tgaacacccaagccataaatcatcatcaacaacatcacttagaaacaacaacatcaattgaa 36356461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 22829712 - 22829638
Alignment:
Q  66 caacccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccat 140  Q
    |||||||||||||||| ||||||||||||||||| ||||||| |||| ||||||||  | || |||||||||||||    
T  22829712 caacccattttacaaagtcaccaacaacaactca-tttctcatcaacaaatcatgaattatgcacacccaagccat 22829638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 38033962 - 38033888
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccat 140  Q
    ||||||||||||||||| ||||||||||||||| | ||||||| |||||||| |||  | || |||||||||||||    
T  38033962 tcaacccattttacaaagtcaccaacaacaactta-tttctcatcaacaatcgtgaactatgcacacccaagccat 38033888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 41229221 - 41229107
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaac 170  Q
    ||||||| |||  |||||||||||||||||| |||| | |||| ||||||  | ||||||| |||||||| | |||| | |||||||||  || ||||||    
T  41229221 attttaccaaactaccaacaacaactcattt-ctcatccacaaatcatgaattatgaacactcaagccatgaatcattaacaacaacatcacttagcaac 41229123  T
Q  171 aacaacatcaattgaa 186  Q
    ||||||||||||||||    
T  41229122 aacaacatcaattgaa 41229107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 7641128 - 7641044
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    ||||||||||||| ||||||||||| ||| |||| ||||||||| ||||| | ||| || |||| ||||| ||| |||||||||||    
T  7641128 caacaacaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcattaattaggcaaaatttcacaac 7641044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 19603055 - 19603092
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattt 102  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  19603055 tcaacccattttacaaagtcaccaacaacaactcattt 19603092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 49997548 - 49997418
Alignment:
Q  87 caacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaaca-tatctc---agcaacaacaacatcaat 182  Q
    ||||||||||| |||| |||| |||||| |||||| | |||||||| || |||| |   ||||||||||||| ||||||   |||||||||||||||| |    
T  49997548 caacaacaacttattt-ctcatcaacaaccatgatttatgaacaccaaatccatga---atgatcaacaacaatatctcttaagcaacaacaacatcagt 49997453  T
Q  183 tgaaacttgattcacaccccaattcaacaacaacat 218  Q
    | |||| |||||| ||||  ||||||||||||||||    
T  49997452 t-aaacatgattctcaccttaattcaacaacaacat 49997418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 52400675 - 52400741
Alignment:
Q  151 caacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    ||||||||| |||||||||||||||| |||||| |||| |||||| || |  ||||||||||||||||    
T  52400675 caacaacatctctcagcaacaacaacgtcaatt-aaacatgattctcatcataattcaacaacaacat 52400741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 13377122 - 13377009
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaac 170  Q
    |||| |||||| | |||||||||| |||||| |||| |||||| ||||||  | |||| || |||||||| | |||  |||||||||||  || ||||||    
T  13377122 atttcacaaaaccgccaacaacaattcattt-ctcatcaacaaatcatgaattatgaatactcaagccatgaatcaacatcaacaacatcacttagcaac 13377024  T
Q  171 aacaacatcaattga 185  Q
    |||||||||||||||    
T  13377023 aacaacatcaattga 13377009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 37234149 - 37234028
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    |||||||||||||||||| || | |||| |||||| ||| ||| || ||| ||||||| | || ||||||||| ||| | |||| | |||||| ||  ||    
T  37234149 tcaacccattttacaaaaccaaccacaaaaactcaattt-tcatcatcaaatcatgatttatggacacccaagtcatgaatcatcaacaacaatatcact 37234051  T
Q  164 cagcaacaacaacatcaattgaa 186  Q
     ||||||||||||||||||||||    
T  37234050 tagcaacaacaacatcaattgaa 37234028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 8538139 - 8538047
Alignment:
Q  125 tgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    |||||||||||||||| | |||| | |||||| ||  || | ||||||||||||||||| |||| |||||| || |  ||||||||||||||||    
T  8538139 tgaacacccaagccatgaatcatcaacaacaatattccttaacaacaacaacatcaatt-aaacatgattctcatcataattcaacaacaacat 8538047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 8603378 - 8603286
Alignment:
Q  125 tgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    |||||||||||||||| | |||| | |||||| ||  || | ||||||||||||||||| |||| |||||| || |  ||||||||||||||||    
T  8603378 tgaacacccaagccatgaatcatcaacaacaatattccttaacaacaacaacatcaatt-aaacatgattctcatcataattcaacaacaacat 8603286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 22035509 - 22035593
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    ||||||||||||| ||||||||||| ||| |||| |||| |||| ||||| | ||| || |||| ||||| ||| |||||||||||    
T  22035509 caacaacaacatccattgaaacttgtttctcacctcaatccaac-acaacttatcacaaatcattaattaggcaaaatttcacaac 22035593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 8e-67; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 72 - 272
Target Start/End: Complemental strand, 3431570 - 3431371
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| ||||  |||||||||||||| |||||||||||||||||| |||| | ||||||||| |||||||||||    
T  3431570 atttcacaaaaccaccaacaacatcttattt-ctcacaaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatgtctcagcaaca 3431472  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacatta 271  Q
    ||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3431471 acaacatcaatcgaaacttgattctcaccttaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaactcattttcatacatta 3431372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 85 - 272
Target Start/End: Original strand, 22886305 - 22886491
Alignment:
Q  85 accaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattg 184  Q
    |||||||||| || | ||||||| ||||||||||||||| |||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||||    
T  22886305 accaacaacatcttaatttctcatcaacaatcatgatatatgaacacccaagtcataaatcataaacaacaacatatctcagcaacaacaacatcaattg 22886404  T
Q  185 aaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||| |||| |||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  22886405 aaacttgattctcacctcaattc-acaacaacatgtcatagttcatcaattaagcataatttcacaacaacccattttcatacattat 22886491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 101 - 272
Target Start/End: Original strand, 18612401 - 18612571
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||| ||| | ||||||||| ||||||||||||||||||||||| || |||||||  ||||    
T  18612401 tttctcaccaacaatcatgatatatgaacactcaagccataat-cataaacaacaacatgtctcagcaacaacaacatcaattaaatcttgatttccacc 18612499  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     ||||||||||||||||||||| || |||||||||||||||||||||| ||||| |||||||||||||||||    
T  18612500 tcaattcaacaacaacatgtcacaattcatcaattaagcataatttcataacaatccattttcatacattat 18612571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 101 - 272
Target Start/End: Original strand, 18619306 - 18619476
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||| ||| | ||||||||| ||||||||||||||||||||||| || |||||||  ||||    
T  18619306 tttctcaccaacaatcatgatatatgaacactcaagccataat-cataaacaacaacatgtctcagcaacaacaacatcaattaaatcttgatttccacc 18619404  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     ||||||||||||||||||||| || |||||||||||||||||||||| ||||| |||||||||||||||||    
T  18619405 tcaattcaacaacaacatgtcacaattcatcaattaagcataatttcataacaatccattttcatacattat 18619476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 101 - 272
Target Start/End: Original strand, 22147433 - 22147603
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||  ||   |||| |||| ||||||||||||||||||||||| ||| ||||||| ||||    
T  22147433 tttctcaccaacaatcatgatatatgaacacctaagccataata-atatacaacgacatgtctcagcaacaacaacatcaattaaaatttgattctcacc 22147531  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     ||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||    
T  22147532 tcaattcaacaacaacatgtcacaattcatcaattaagcataatttcataacaacccattttcatacattat 22147603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 101 - 272
Target Start/End: Original strand, 2544944 - 2545111
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    ||||||||||||||||||||||| | ||||||||||||||||| ||| | ||||||||| | |||   ||||||||||||||||||||||||||| ||||    
T  2544944 tttctcaacaacaatcatgatatatcaacacccaagccataat-cataaacaacaacatgtatca---acaacaacatcaattgaaacttgattcccacc 2545039  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     ||||||||||||||||||| |||| |||||||||||||||||||| ||||| ||||||||||| |||||||    
T  2545040 tcaattcaacaacaacatgttataattcatcaattaagcataattttacaactacccattttcacacattat 2545111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 85 - 272
Target Start/End: Complemental strand, 21494725 - 21494551
Alignment:
Q  85 accaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattg 184  Q
    |||||||||| |||| || |||| ||||||||||||||| || |||||||||  |||| |||| | ||||||||||||||||||||||||||||||||||    
T  21494725 accaacaacatctcaatt-ctcaccaacaatcatgatatatgcacacccaagttataaatcataaacaacaacatatctcagcaacaacaacatcaattg 21494627  T
Q  185 aaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||| |||| |||| |||||||||            ||||||||||||||||||||||||| |||| ||||||||||||||    
T  21494626 aaacttgattctcacctcaatccaacaacaa------------catcaattaagcataatttcacaactaccccttttcatacattat 21494551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 13721217 - 13721107
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| |||| ||||||| ||| ||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  13721217 atttcacaaaaccaccaacaacatcttattt-ctcatcaacaattatggtatatgaacacccaagccataaatcataatcaacaacatatctcagcaaca 13721119  T
Q  172 acaacatcaatt 183  Q
    ||||||||||||    
T  13721118 acaacatcaatt 13721107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 33528383 - 33528535
Alignment:
Q  64 atcaacccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatc 162  Q
    |||||||||||||||||||||| |||||||||| || ||||||| || | ||||||||| | |||||||||||||||| |   || |||||||| |||||    
T  33528383 atcaacccattttacaaaatcaacaacaacaaccca-tttctcatcatcaaatcatgatttatgaacacccaagccatga---atcatcaacaaaatatc 33528478  T
Q  163 tc--agcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    ||  ||||||||||||||||||| |||| ||| || || | |||||||||||||||||    
T  33528479 tcttagcaacaacaacatcaatt-aaacatgaatctcatcacaattcaacaacaacat 33528535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 5854572 - 5854724
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    |||||||||||||||||| || ||||||||||||| || |||| || ||| ||||||| | |||||||||||||||| | |||| | |||||| ||  ||    
T  5854572 tcaacccattttacaaaaccaacaacaacaactcaatt-ctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcact 5854670  T
Q  164 cagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
     |||||||||||||||||||| ||| ||| || || | |||||||||||||||||    
T  5854671 tagcaacaacaacatcaattg-aacatgaatctcatcacaattcaacaacaacat 5854724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 235
Target Start/End: Complemental strand, 21198434 - 21198272
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaac 170  Q
    ||||||| ||| ||||||||||||||||||| |||| | |||| ||||||  | |||||||||||||||| | |||| | || ||||||  || ||||||    
T  21198434 attttaccaaaccaccaacaacaactcattt-ctcatccacaaatcatgaattatgaacacccaagccatgaatcattaacagcaacatcacttagcaac 21198336  T
Q  171 aacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    |||||||||||||| ||| ||||||  ||| |||||||||||||||||  ||||| ||| |||||    
T  21198335 aacaacatcaattg-aacatgattcttaccacaattcaacaacaacataacataattcaacaatt 21198272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 38533607 - 38533759
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    ||||||||||||||||| || ||||||||| ||||||| |||| |||||| ||||||  | || ||||||||||||| | | || |||||||||||  |     
T  38533607 tcaacccattttacaaagtctccaacaacatctcattt-ctcatcaacaaatcatgaattatgcacacccaagccatgaattatcatcaacaacatcacc 38533705  T
Q  164 cagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
     |||||||||||||||||||| ||| ||| || || | |||||||||||||||||    
T  38533706 tagcaacaacaacatcaattg-aacatgaatctcatcacaattcaacaacaacat 38533759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 235
Target Start/End: Original strand, 23837163 - 23837325
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaac 170  Q
    |||| |||||| ||||| ||||||||||||| |||| |||||| ||||||  | |||| ||||||||||| | |||| | |||||||||  || ||||||    
T  23837163 atttcacaaaaccaccaccaacaactcattt-ctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaac 23837261  T
Q  171 aacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    |||||||||||||| ||| ||| ||  ||| |||||||||||||||||  ||||| ||| |||||    
T  23837262 aacaacatcaattg-aacatgactcttaccacaattcaacaacaacatagcataattcaacaatt 23837325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 26011452 - 26011604
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    |||||||||||||||||| || ||||||||||| |  |||||| || | ||||||||| | |||||||||||||||| | |||| | |||||| ||  ||    
T  26011452 tcaacccattttacaaaaccaacaacaacaactta-attctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcact 26011550  T
Q  164 cagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
     |||||||||||||||||||  ||| ||| || || | |||||||||||||||||    
T  26011551 tagcaacaacaacatcaatt-caacatgaatctcatcacaattcaacaacaacat 26011604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 218
Target Start/End: Complemental strand, 27233348 - 27233204
Alignment:
Q  73 ttttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||||||||| || ||||||||||| | |||||||  | | ||||||||| | |||||||||||||||| | |||| | |||||| || ||| | |||||    
T  27233348 ttttacaaaaccaacaacaacaactta-tttctcattatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttaacaaca 27233250  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    |||||||||||| |||| |||||| || | |||||||||||||||||    
T  27233249 acaacatcaatt-aaacatgattctcatcacaattcaacaacaacat 27233204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 248
Target Start/End: Complemental strand, 16873340 - 16873166
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| |||||| |||| || |||| |||| ||| ||| ||| ||| ||||||||||||||  || ||||  ||||||||||||||||||||||    
T  16873340 atttcacaaaaccaccaataacatcttattt-ctcatcaataattatggtatatgaacacccaagcctcaaatcatactcaacaacatatctcagcaaca 16873242  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttca 248  Q
    |||||||| ||| | |  ||||| ||| | || |||||| | ||||| ||| |  |||||||||||| |||||||||    
T  16873241 acaacatcgatt-acatatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataatttca 16873166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 218
Target Start/End: Complemental strand, 18261762 - 18261608
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| || ||||||||||| | || |||| || ||| ||||||| | ||||||||||||| || | |||| | |||||| || |    
T  18261762 atcaacccatttttacaaaaccaacaacaacaacttaatt-ctcatcatcaactcatgatttatgaacacccaagctatgaatcatcaacaacaatatct 18261664  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    || | ||||||||||||||||| |||| |||||| || | |||||||||||||||||    
T  18261663 cttaacaacaacaacatcaatt-aaacatgattctcatcacaattcaacaacaacat 18261608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 22736127 - 22736006
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| |||||| ||||||  | || ||||||||||||| | | |  | |||||||||   |    
T  22736127 tcaacccattttacaaagtcaccaacaacaactcatttt-tcatcaacaattcatgaattatgcacacccaagccatgaattaacaacaacaacatcagt 22736029  T
Q  164 cagcaacaacaacatcaattgaa 186  Q
     ||||| ||||||||||||||||    
T  22736028 tagcaagaacaacatcaattgaa 22736006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 215
Target Start/End: Complemental strand, 37653895 - 37653756
Alignment:
Q  73 ttttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||||||||| || ||||||||||| ||||| ||| || ||| ||||||||||  |||||||||||||||| |||| | |||||| ||  || | |||||    
T  37653895 ttttacaaaaccaacaacaacaacttatttt-tcatcatcaaatcatgatatg--aacacccaagccataaatcatcaacaacaatattccttaacaaca 37653799  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaa 215  Q
    |||||||||||| |||| |||||| || |  |||||||||||||    
T  37653798 acaacatcaatt-aaacatgattctcaacagaattcaacaacaa 37653756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 218
Target Start/End: Complemental strand, 33611334 - 33611190
Alignment:
Q  73 ttttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||||||||| || ||||||||||| | | ||||| || | ||||||||| | ||||||| |||||||| | |||| | |||||| ||  || |||||||    
T  33611334 ttttacaaaaccaacaacaacaactta-tatctcatcatcaaatcatgatttatgaacacacaagccatgaatcatcaacaacaatatcacttagcaaca 33611236  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    |||||||||||| |||| || ||| || | |||||||||||||||||    
T  33611235 acaacatcaatt-aaacatggttctcaacacaattcaacaacaacat 33611190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 38635877 - 38635785
Alignment:
Q  125 tgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    |||||||||||||||| | |||| | |||||| || ||| | ||||||||||||||||| |||| |||||| || |  ||||||||||||||||    
T  38635877 tgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt-aaacatgattctcatcataattcaacaacaacat 38635785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 218
Target Start/End: Complemental strand, 18041823 - 18041669
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| || ||||||||||| |||| | || ||  || ||||||| | |||||||| |||| || | |||| | |||||| ||||    
T  18041823 atcaacccattttcacaaaaccaacaacaacaacttattt-cacatcataaactcatgatttatgaacacctaagctatgaatcatcaacaacaatatat 18041725  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    || | ||||||||||||||||| |||| |||||| || | ||| |||||||||||||    
T  18041724 cttaacaacaacaacatcaatt-aaacatgattctcatcacaaatcaacaacaacat 18041669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 23217974 - 23218014
Alignment:
Q  205 ttcaacaacaacatgtcataagtcatcaattaagcataatt 245  Q
    ||||||||||||||||||||| ||||||||| | |||||||    
T  23217974 ttcaacaacaacatgtcataattcatcaattgaacataatt 23218014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 45465393 - 45465263
Alignment:
Q  87 caacaacaactcattttctcaacaacaat-catgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattga 185  Q
    |||||||||||||||| | || || |||| |||||| | ||||||||||| | || | |||| | |||||| || ||| | ||||||||||||||||| |    
T  45465393 caacaacaactcatttcc-catcatcaattcatgatttatgaacacccaaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt-a 45465296  T
Q  186 aacttgattcacaccccaattcaacaacaacat 218  Q
    ||| |||||| || | ||||||||||| |||||    
T  45465295 aacatgattctcatcacaattcaacaataacat 45465263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 8e-67; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 72 - 272
Target Start/End: Original strand, 371055 - 371254
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| ||||  |||||||||||||| |||||||||||||||||| |||| | ||||||||| |||| ||||||    
T  371055 atttcacaaaaccaccaacaacatcttattt-ctcacaaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatgtctcggcaaca 371153  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacatta 271  Q
    ||||||||||| |||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  371154 acaacatcaatcgaaacttgattctcaccttaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacatta 371253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 14251187 - 14251077
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| |||| ||||||| ||| ||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  14251187 atttcacaaaaccaccaacaacatcttattt-ctcatcaacaattatggtatctgaacacccaagccataagtcataatcaacaacatatctcagcaaca 14251089  T
Q  172 acaacatcaatt 183  Q
    ||||||||||||    
T  14251088 acaacatcaatt 14251077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 72 - 183
Target Start/End: Original strand, 15927535 - 15927645
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||||||||| || |||| |||| ||||||| ||| |||||||||||||||||||||  |||| |||||||||||||||||||||||    
T  15927535 atttcacaaaaccaccaacaacatcttattt-ctcatcaacaattatggtatgtgaacacccaagccatagatcataatcaacaacatatctcagcaaca 15927633  T
Q  172 acaacatcaatt 183  Q
    ||||||||||||    
T  15927634 acaacatcaatt 15927645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 18980310 - 18980200
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| ||||| ||||| || |||| |||| ||||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  18980310 atttcacaaaaccaccaccaacatcttattt-ctcatcaacaattatgatatatgaacacccaagccataaatcataatcaacaacatatctcagcaaca 18980212  T
Q  172 acaacatcaatt 183  Q
    ||||||||||||    
T  18980211 acaacatcaatt 18980200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 185
Target Start/End: Complemental strand, 7284376 - 7284229
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    ||||| |||||||||||||||| | |||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||    || | || ||||    
T  7284376 acatcgtcaaaatcaaacttctccattatcaacccatttaacaaaaccaccaacaacaactca-tttctcaacaacaatcatgaatcatgcaaactcaag 7284278  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattga 185  Q
    |||| | | || |||||||||||  |  | |||||||||||||||||||    
T  7284277 ccatgaattattatcaacaacatgacatatcaacaacaacatcaattga 7284229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 186
Target Start/End: Complemental strand, 14272203 - 14272054
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaa 135  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||| ||||| |||||||||| ||||||| || | ||||||||  | ||||||| |||    
T  14272203 acatcattaaaataaaacttcttcatcatcaacccattttacaaaaccaccaccaacaactca-tttctcatcatctaatcatgaattatgaacactcaa 14272105  T
Q  136 gccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaa 186  Q
    ||||| | |||| | |||||| ||   | ||||||||||||||||||||||    
T  14272104 gccatgaatcatcaacaacaatatcatttagcaacaacaacatcaattgaa 14272054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 248
Target Start/End: Original strand, 13758337 - 13758511
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaaca 171  Q
    |||| |||||| |||||| |||| || |||| |||| ||||||| ||| ||| ||||||||||||||  || ||||  ||||||||||||||||||||||    
T  13758337 atttcacaaaaccaccaataacatcttattt-ctcatcaacaattatggtatatgaacacccaagcctcaaatcatactcaacaacatatctcagcaaca 13758435  T
Q  172 acaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttca 248  Q
    |||||||||||| | |  ||||| ||| | || |||||| | ||||| ||| |  |||||||||||| |||||||||    
T  13758436 acaacatcaatt-acatatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataatttca 13758511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 235
Target Start/End: Complemental strand, 17224220 - 17224058
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaac 170  Q
    ||||||||||| ||||||||||||||||||| |||| |||||| ||||||  | |||| ||||||||||| | |||| || ||||||||  || ||||||    
T  17224220 attttacaaaaccaccaacaacaactcattt-ctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcattaacaacatcacttagcaac 17224122  T
Q  171 aacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    |||||||||||||||| | ||| ||  ||  |||||||||||||||||  ||||| ||| |||||    
T  17224121 aacaacatcaattgaa-catgactcttacaacaattcaacaacaacatagcataattcaacaatt 17224058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 48356602 - 48356754
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    |||||||||||||||||| || ||||||||||||| || |||| || ||| ||||||| | |||||||||||||||| | |||| | |||||| ||  ||    
T  48356602 tcaacccattttacaaaaccaacaacaacaactcaatt-ctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcact 48356700  T
Q  164 cagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
     |||||||||||||||||||||| | ||| || || |  ||||||||||||||||    
T  48356701 tagcaacaacaacatcaattgaa-catgaatctcatcataattcaacaacaacat 48356754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 235
Target Start/End: Original strand, 13377485 - 13377656
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| || ||| || ||||||||||| |||| |||| || ||| ||||||| | |||||||||||||||| | |||| |||||||||||      
T  13377485 atcaacccattttcaccaaaccaacaacaacaacttattt-ctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacatta 13377583  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    || |||||||||||||||||||||| | ||| ||  | | |||||||||||||||||  ||||| | |||||||    
T  13377584 cttagcaacaacaacatcaattgaa-catgaatcttatcacaattcaacaacaacatagcataattaatcaatt 13377656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 16915217 - 16915096
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    |||||||||||||||||| || ||||||||||||| || |||  || ||| ||||||| | |||||||||||||||| | |||| | |||||| ||  ||    
T  16915217 tcaacccattttacaaaaccaacaacaacaactcaatt-ctcttcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatgact 16915119  T
Q  164 cagcaacaacaacatcaattgaa 186  Q
     ||||||||||||||||||||||    
T  16915118 tagcaacaacaacatcaattgaa 16915096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 218
Target Start/End: Complemental strand, 34241477 - 34241325
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    ||||||| |||||||||| || ||||||||||||||||| ||| || | ||||||||| | ||||||| |||||||| | |||| | ||||||  |  ||    
T  34241477 tcaaccctttttacaaaaccaacaacaacaactcatttt-tcatcatcaaatcatgatttatgaacactcaagccatgaatcatcaacaacaatgtcact 34241379  T
Q  164 cagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
     | ||||||||||||||||| |||| |||||| || |  ||||||||||||||||    
T  34241378 tatcaacaacaacatcaatt-aaacatgattctcatcataattcaacaacaacat 34241325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 10000564 - 10000480
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    ||||| ||||||| ||||||||||| ||| |||| ||||||||| ||||| | ||| || |||||||||||||| |||||||||||    
T  10000564 caacagcaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcatcaattaagcaaaatttcacaac 10000480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 13352044 - 13352089
Alignment:
Q  200 cccaattcaacaacaacatgtcataagtcatcaattaagcataatt 245  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||    
T  13352044 cccaattcaacaacaacatgtcataattcatcaattgagcataatt 13352089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 15358803 - 15358907
Alignment:
Q  113 aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaa 212  Q
    |||| |||||| |||||||||||||||| | |||| | |||||| |  ||| | ||||||||||||||||| |||| |||||| || | |||||||||||    
T  15358803 aatcttgatatatgaacacccaagccatgaatcatcaacaacaaaacttcttaacaacaacaacatcaatt-aaacatgattcccatcacaattcaacaa 15358901  T
Q  213 caacat 218  Q
    ||||||    
T  15358902 caacat 15358907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 16418559 - 16418643
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    ||||||||||||| ||||||||||| ||| |||| ||||||||| ||||| | ||| || |||| ||||| ||| |||||||||||    
T  16418559 caacaacaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcattaattaggcaaaatttcacaac 16418643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 20583795 - 20583691
Alignment:
Q  113 aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaa 212  Q
    ||||||||| | |||||||||||||||| | |||| | |||||| ||  || | ||||||||||||||||| |||| |||||| || |  ||||||||||    
T  20583795 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcccttaacaacaacaacatcaatt-aaacatgattctcatcataattcaacaa 20583697  T
Q  213 caacat 218  Q
    ||||||    
T  20583696 caacat 20583691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 31501191 - 31501283
Alignment:
Q  125 tgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    |||||||||||||||| | |||| | |||||| || ||  | ||||||||||||||||| |||| |||||| || | |||||||||||||||||    
T  31501191 tgaacacccaagccatgaatcatcaacaacaatatctcataacaacaacaacatcaatt-aaacatgattctcatcacaattcaacaacaacat 31501283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 218
Target Start/End: Complemental strand, 17947831 - 17947729
Alignment:
Q  115 tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaaca 214  Q
    ||||||| | ||||||||||||| || | |||| | |||||| || ||| | ||||||||||||||||| |||| |||||| || | ||| |||||||||    
T  17947831 tcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt-aaacatgattctcatcacaaatcaacaaca 17947733  T
Q  215 acat 218  Q
    ||||    
T  17947732 acat 17947729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 25124136 - 25124206
Alignment:
Q  113 aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaatt 183  Q
    ||||||||| |||||||||||| ||||| | |||| | ||||||||| ||  | |||||||||||||||||    
T  25124136 aatcatgatttgtgaacacccatgccatgaatcatcaacaacaacatctcatatcaacaacaacatcaatt 25124206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 13449094 - 13448964
Alignment:
Q  87 caacaacaactcattttctcaacaacaat-catgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattga 185  Q
    |||||||||||||||| |||| || |||| |||||| | | ||||||||||| |  | |||| | |||||| || ||| | ||||||||||||||||| |    
T  13449094 caacaacaactcattt-ctcatcatcaattcatgatttatcaacacccaagctacgaatcatcaacaacaatatctcttaacaacaacaacatcaatt-a 13448997  T
Q  186 aacttgattcacaccccaattcaacaacaacat 218  Q
    ||| |||||| || | ||||||||||| |||||    
T  13448996 aacatgattctcatcacaattcaacaataacat 13448964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 28390292 - 28390422
Alignment:
Q  87 caacaacaactcattttctcaacaacaat-catgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattga 185  Q
    |||||||||||||||| |||| || |||| |||||| | ||||||||||| | || | |||| | |||||| || ||| | ||||||||||||||||| |    
T  28390292 caacaacaactcattt-ctcatcatcaattcatgatttatgaacacccaaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt-a 28390389  T
Q  186 aacttgattcacaccccaattcaacaacaacat 218  Q
    ||| |||||  || | ||||||||||| |||||    
T  28390390 aacatgattatcatcacaattcaacaataacat 28390422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 38424175 - 38424329
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| |  ||||||||||| ||||| ||| || ||| ||||||| | |||||||||||| ||| | |||| | |||||| || |    
T  38424175 atcaacccatttttacaaaacccacaacaacaacttatttt-tcaccatcaaatcatgatttatgaacacccaagtcatgaatcatcaacaacaatatct 38424273  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    || | |||||||||||||| || |||| | |||| || |  ||||||||||||||||    
T  38424274 cttaacaacaacaacatcactt-aaacataattctcatcataattcaacaacaacat 38424329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 68 - 272
Target Start/End: Complemental strand, 5875 - 5671
Alignment:
Q  68 acccattt-tacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcag 166  Q
    |||||||| |||||||  |||||||||| ||||||| |||| |||||||||||| || |||||||||||| ||||| |||| | ||||||||| ||||||    
T  5875 acccatttatacaaaacaaccaacaacatctcattt-ctcaccaacaatcatgacatatgaacacccaagtcataaatcataaacaacaacatttctcag 5777  T
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcata 266  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||    
T  5776 caacaacaacatcaattgaaacttgattctcacctcaattcaacaacaacatgtcataattcattaattaagcataatttcaaaacaacccattttcata 5677  T
Q  267 cattat 272  Q
    ||||||    
T  5676 cattat 5671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 85 - 268
Target Start/End: Complemental strand, 50124 - 49942
Alignment:
Q  85 accaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattg 184  Q
    |||||||||| || ||||| ||| ||||||||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  50124 accaacaacatcttatttt-tcatcaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatatctcagcaacaacaacatcaattg 50026  T
Q  185 aaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcataca 268  Q
    ||||||||||| |||| ||||||||| |||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||    
T  50025 aaacttgattctcacctcaattcaaccacaacatgtcataattcatcaattaagtataatttcacaactacccattttcataca 49942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 109 - 272
Target Start/End: Original strand, 5224 - 5386
Alignment:
Q  109 caacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattca 208  Q
    ||||||||||||||| ||||||||||||||||||| ||| | ||||||||| ||||||||||||||||||||||| || |||||||| |||| |||||||    
T  5224 caacaatcatgatatatgaacacccaagccataat-cataaacaacaacatgtctcagcaacaacaacatcaattaaatcttgattctcacctcaattca 5322  T
Q  209 acaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
    |||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||    
T  5323 acaacaacatgtcacaattcatcaattaagcataatttcataacaacccattttcatacattat 5386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 101 - 272
Target Start/End: Original strand, 11740 - 11909
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    ||||||| ||||||||||||||| |||||||||||||||||| |||| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  11740 tttctcaccaacaatcatgatatatgaacacccaagccataaatcataa-caacaacatgtctcagcaacaacaacatcaattgaaacttgattctcacc 11838  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     ||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||| |||||||    
T  11839 tcaattcaacaa-aacatgtcatgattcatcaattaagcataatttcacaactacccattttcaaacattat 11909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 100 - 272
Target Start/End: Complemental strand, 165224 - 165056
Alignment:
Q  100 ttttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacac 199  Q
    |||||||| ||||||||||||||| |||||||||||||||||||     || |||||||| ||||||||||||||||||||||| ||||||||||| |||    
T  165224 ttttctcaccaacaatcatgatatatgaacacccaagccataatc----ataaacaacatgtctcagcaacaacaacatcaattaaaacttgattctcac 165129  T
Q  200 cccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  165128 ctcaattcaacaacaacatgtcataattcatcaattaagcataatttcataagaacccattttcatacattat 165056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 101 - 272
Target Start/End: Original strand, 17695 - 17863
Alignment:
Q  101 tttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacacc 200  Q
    ||||||| ||||||||||||||| ||| |||||||||||||| |||| | ||||||| | ||||||||||   |||||||||||||||||||||| ||||    
T  17695 tttctcaccaacaatcatgatatatgagcacccaagccataaatcataaacaacaacttgtctcagcaac---aacatcaattgaaacttgattctcacc 17791  T
Q  201 ccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
     |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  17792 tcaattcaacaacaacatgtcataattcatcaattaagcataatttcacaactacccattttcatacattat 17863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 127 - 272
Target Start/End: Complemental strand, 61461 - 61317
Alignment:
Q  127 aacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataag 226  Q
    ||||| |||||||| | |||| | |||||| || ||| | | ||||||||||||||| |||| |||||| || | |||||||||||||||||||||||||    
T  61461 aacacacaagccatgaatcatcaacaacaatatctcttaaccacaacaacatcaatt-aaacatgattctcatcacaattcaacaacaacatgtcataag 61363  T
Q  227 tcatcaattaagcataatttcacaacaacccattttcatacattat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  61362 tcatcaattaagcataatttcacaacaacccattttcatacattat 61317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 168 - 272
Target Start/End: Complemental strand, 34607 - 34503
Alignment:
Q  168 aacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcatac 267  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||    
T  34607 aacaacaacatcaattgaaacttgattttcacctcaattcaacaacaacatgtcataattcatcaattaagcataatttcacaactacccattttcacac 34508  T
Q  268 attat 272  Q
    |||||    
T  34507 attat 34503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 251
Target Start/End: Complemental strand, 13575 - 13395
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatct---cagca 168  Q
    |||| |||||| ||| ||||||||  ||||| |||||||| ||||||||||| | |||||||||||||||| |||| | ||||||||| | |   || ||    
T  13575 atttcacaaaaccactaacaacaatccattt-ctcaacaagaatcatgatatatcaacacccaagccataa-tcataaacaacaacatgtatcaacaaca 13478  T
Q  169 acaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaa 251  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  13477 acaacaacatcaattgaaacttgatttccacctcaattcaacaacaacatgtcataattcatcaattaaacataatttcacaa 13395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 94061 - 94024
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattt 102  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  94061 tcaacccattttacaaagtcaccaacaacatctcattt 94024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 235
Target Start/End: Original strand, 28466 - 28663
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaa 135  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| ||| || ||||||  | |||||||||||    
T  28466 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcattt-ctcaccaataaatcatgaattatgaacacccaa 28564  T
Q  136 gccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    ||||| | |||| | |||||||||  || |||||||||||||||||||||| | | ||||  ||  |||||||||||||||||  ||||| ||| |||||    
T  28565 gccatgaatcattaacaacaacatcacttagcaacaacaacatcaattgaa-cataattcttactacaattcaacaacaacataccataattcaacaatt 28663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 21637 - 21687
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcacc 87  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  21637 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccacc 21687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 169 - 272
Target Start/End: Complemental strand, 17506 - 17404
Alignment:
Q  169 acaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaacaacccattttcataca 268  Q
    ||||||||||||||| |||| |||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17506 acaacaacatcaatt-aaacatgattctcatcacaattcaacaacaacatgtcataagtcatcaattaagcataatttcacagcaacccattttcataca 17408  T
Q  269 ttat 272  Q
    ||||    
T  17407 ttat 17404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 185
Target Start/End: Original strand, 3230 - 3377
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    || | |||||||    
T  3230 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactca-tttctcaacaacaatcatgaatcatgcaaacccaag 3328  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattga 185  Q
    |||| | | || |||||||||||  |  | |||||||||||||||||||    
T  3329 ccatgaattatcatcaacaacatgacatatcaacaacaacatcaattga 3377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 24890 - 24972
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatga 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  24890 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactca-tttctcaacaacaatcatga 24972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 181
Target Start/End: Original strand, 21442 - 21586
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaa 135  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||| ||||||    || | ||||||    
T  21442 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactca-tttcttaacaacaattcatgaatcatgcaaacccaa 21540  T
Q  136 gccataattcatgatcaacaacatatctcagcaacaacaacatcaa 181  Q
    ||||| | | || |||||||||||  || |||||||||||||||||    
T  21541 gccatgaattatcatcaacaacatgacttagcaacaacaacatcaa 21586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 185
Target Start/End: Original strand, 31141 - 31289
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaa 135  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||    || | ||||||    
T  31141 acatcatcaaaatcaaactttttcattatcaacccattttacaaaaccaccaacaacaactca-tttctcaacaacaattcatgaatcatgcaaacccaa 31239  T
Q  136 gccataattcatgatcaacaacatatctcagcaacaacaacatcaattga 185  Q
    ||||| | | || |||||||||||  || |||||||| ||||||||||||    
T  31240 gccatgaattatcatcaacaacatgacttagcaacaaaaacatcaattga 31289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 37 - 185
Target Start/End: Original strand, 75 - 222
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||| ||||||| ||||||||||||    || | |||||||    
T  75 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaacaacaacaactca-tttctcagcaacaatcatgaatcatgcaaacccaag 173  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattga 185  Q
    |||| | | || |||||||||||  |  | |||||||||||||||||||    
T  174 ccatgaattatcatcaacaacatgacatatcaacaacaacatcaattga 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 185
Target Start/End: Complemental strand, 430 - 283
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaag 136  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | |||| ||||||||||||||||||||    || | |||||||    
T  430 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaaaagctca-tttctcaacaacaatcatgaatcatgcaaacccaag 332  T
Q  137 ccataattcatgatcaacaacatatctcagcaacaacaacatcaattga 185  Q
    | || | | || |||||||||||  |  | |||||||||||||||||||    
T  331 ctatgaattatcatcaacaacatgacatatcaacaacaacatcaattga 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 6679 - 6603
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa 114  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||  |||||||||||||    
T  6679 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaagaacaactca-attctcaacaacaa 6603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 218
Target Start/End: Complemental strand, 44087 - 43935
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    |||||||||||||||||| || |||||||||||||||| |||| || ||| ||||||| | |||||||||||||||| | |||| | |||||| ||  ||    
T  44087 tcaacccattttacaaaaccaacaacaacaactcattt-ctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcact 43989  T
Q  164 cagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
     ||||||||||||||||||| |||| |||||| || |  ||||||||||||||||    
T  43988 tagcaacaacaacatcaatt-aaacatgattctcatcataattcaacaacaacat 43935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 218
Target Start/End: Complemental strand, 23963 - 23809
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| || ||||||||| | ||||| ||| || ||| | |||||||  |||||| |||||||| | |||| | |||||| ||      
T  23963 atcaacccatttttacaaaaccaacaacaacaatttatttt-tcatcatcaaattatgatatacgaacacacaagccatgaatcatcaacaacaatattc 23865  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    || | |||||||||| |||||| |||| |||||| || | |||||||||||||||||    
T  23864 cttaacaacaacaacgtcaatt-aaacatgattctcatcacaattcaacaacaacat 23809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 69415 - 69567
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    |||||||||||||||||| || |||||||| |||| || |||| || ||| ||||||| | |||||||||||||||| | |||| | |||||| ||  ||    
T  69415 tcaacccattttacaaaaccaacaacaacacctcaatt-ctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcact 69513  T
Q  164 cagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
     |||||||||||||||||||| ||| ||| || || | |||||||||||||||||    
T  69514 tagcaacaacaacatcaattg-aacatgaatctcatcacaattcaacaacaacat 69567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 245
Target Start/End: Complemental strand, 244959 - 244920
Alignment:
Q  206 tcaacaacaacatgtcataagtcatcaattaagcataatt 245  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  244959 tcaacaacaacatgtcataattcatcaattgagcataatt 244920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 235
Target Start/End: Complemental strand, 77129 - 76967
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaac 170  Q
    |||| |||||| |||||||||||||||| ||||||| |||| ||||||||  | |||| ||||||||||| | |||| |  ||||| ||  || ||||||    
T  77129 atttcacaaaaccaccaacaacaactca-tttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaataacaatatcacttagcaac 77031  T
Q  171 aacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    |||||||||||||| ||| ||| || |||| |||||||||||||||||  ||||| ||| |||||    
T  77030 aacaacatcaattg-aacatgaatctcaccacaattcaacaacaacatagcataattcaacaatt 76967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 6500 - 6654
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| || ||||||||||| | ||||||| || | ||||||||| | |||||||| ||||||| | |||| | |||||| || |    
T  6500 atcaacccatttttacaaaaccaacaacaacaactta-tttctcatcatcaaatcatgatttatgaacacctaagccatgaatcatcaacaacaatatct 6598  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    || |||||||||| |||||||| |||| |||||| || |  ||||||||||||||||    
T  6599 cttagcaacaacatcatcaatt-aaacatgattctcatcataattcaacaacaacat 6654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 2483 - 2635
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    ||||||||||||| |||| || ||||||||| |||||| |||| || ||| ||||||| | ||||||||||| |||| | |||| | |||||| ||  ||    
T  2483 tcaacccattttagaaaaccaacaacaacaagtcattt-ctcatcatcaaatcatgatttatgaacacccaaaccatgaatcatcaacaacaatatcact 2581  T
Q  164 cagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
     |||||||||||||||||||||| | ||| || || |  ||||||||||||||||    
T  2582 tagcaacaacaacatcaattgaa-catgaatctcatcataattcaacaacaacat 2635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 13048 - 12990
Alignment:
Q  40 tcatcaaaatcaaacttcttctttatcaacccatttt-acaaaatcaccaacaacaact 97  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| || |||||||||||    
T  13048 tcatcaaaatcaaacttcttcattatcaacccattttcacaaaaccatcaacaacaact 12990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 103211 - 103090
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||| |||||| ||||||  | || |||||||| |||| | | || |||||||||||  ||    
T  103211 tcaacccattttacaaagtcaccaacaacaactca-tttatcaccaacaattcatgaattatgcacacccaaaccatgaattatcatcaacaacatcact 103113  T
Q  164 cagcaacaacaacatcaattgaa 186  Q
     || ||||| |||||||||||||    
T  103112 tagaaacaataacatcaattgaa 103090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 4611 - 4715
Alignment:
Q  113 aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaa 212  Q
    |||| |||||| |||||||||||||||| | |||| | |||||| |  ||| | ||||||||||||||||| |||| |||||| || | |||||||||||    
T  4611 aatcttgatatatgaacacccaagccatgaatcatcaacaacaaaacttcttaacaacaacaacatcaatt-aaacatgattcccatcacaattcaacaa 4709  T
Q  213 caacat 218  Q
    ||||||    
T  4710 caacat 4715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 235
Target Start/End: Original strand, 270 - 436
Alignment:
Q  68 acccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcag 166  Q
    ||||| ||||||||| |||||||||||||||| ||||||| |||| ||||||||  | ||| |||||||| ||| | | || | ||| |||||  || ||    
T  270 acccagtttacaaaaccaccaacaacaactca-tttctcatcaacaaatcatgaattatgagcacccaaggcatgaataatcaacaaaaacatcacttag 368  T
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    |||||||||||||||||| ||| ||| ||  ||| ||||||||||| |||||  ||||| ||| |||||    
T  369 caacaacaacatcaattg-aacatgactcttaccacaattcaacaataacatagcataattcaacaatt 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 107967 - 108086
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaatcatgatatgtgaacacccaagccataattcatgatcaacaacatatc 162  Q
    ||||||||||||| | |||| || ||||||||||| |||| |||| ||| | ||||||| | ||||||||||||| || | |||| | |||||| |||||    
T  107967 atcaacccatttttaaaaaaccaacaacaacaacttattt-ctcatcaaaattcatgatttatgaacacccaagctatgaatcatcaacaacaatatatc 108065  T
Q  163 tcagcaacaacaacatcaatt 183  Q
    | | |||||||||||||||||    
T  108066 ttaacaacaacaacatcaatt 108086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 235
Target Start/End: Original strand, 35444 - 35605
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaac 170  Q
    ||||||||||| |||||||| |||||||||| |||| |||||| ||||||  | |||| ||||||||||| | |||| | |||||||||  || ||||||    
T  35444 attttacaaaaccaccaaca-caactcattt-ctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaac 35541  T
Q  171 aacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaatt 235  Q
    || ||||||||||| ||| ||| ||  ||| || ||||||||||||||  ||||| ||| |||||    
T  35542 aaaaacatcaattg-aacatgactcttaccacatttcaacaacaacatagcataaatcaacaatt 35605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 1732 - 1693
Alignment:
Q  144 tcatgatcaacaacatatctcagcaacaacaacatcaatt 183  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  1732 tcataatcaacaacatatctcagcaacaacaacatcaatt 1693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 30978 - 31099
Alignment:
Q  65 tcaacccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatct 163  Q
    |||||||||||||||||| || |||||||||||||  |||||| || | |||| |||| | ||||||| |||||||| | |||| | |||||  ||  ||    
T  30978 tcaacccattttacaaaagcaacaacaacaactca-attctcatcatcaaatcttgatttatgaacactcaagccatgaatcatcaacaacagtatcact 31076  T
Q  164 cagcaacaacaacatcaattgaa 186  Q
     ||||||||||||||||||||||    
T  31077 tagcaacaacaacatcaattgaa 31099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 23943 - 23859
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    ||||||||||||| ||||||||||| ||| |||| ||||||||| ||||| | ||| || |||| ||||| ||| |||||||||||    
T  23943 caacaacaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcattaattaggcaaaatttcacaac 23859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 248
Target Start/End: Original strand, 4906 - 5081
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaac 170  Q
    |||| |||||| ||||||||||||  ||||| |||| || ||| ||||||  | |||||| ||||||||| | | || |||||||||||  || ||||||    
T  4906 atttcacaaaaccaccaacaacaatccattt-ctcatcagcaaatcatgaattatgaacaaccaagccatgaattatcatcaacaacatgacttagcaac 5004  T
Q  171 aacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttca 248  Q
    |||||||||||||| | | |||  |  | | ||||||||||||||||  |||||| ||| |||||||||||| |||||    
T  5005 aacaacatcaattg-atcatgaaacttatcacaattcaacaacaacaaatcataattcaccaattaagcatattttca 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 116795 - 116687
Alignment:
Q  72 attttacaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaac 170  Q
    ||||||||||| ||||||||||||  |||||| ||| |||||| ||||||  | |||||||||||||||| | |||| | |||||| ||  || ||||||    
T  116795 attttacaaaaccaccaacaacaatccatttt-tcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaac 116697  T
Q  171 aacaacatca 180  Q
    ||||||||||    
T  116696 aacaacatca 116687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 215
Target Start/End: Original strand, 27453 - 27604
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| |  |||||||||||||||| | || || ||| ||||||| | ||||||||||||| || | |||| | |||||| || |    
T  27453 atcaacccatttttacaaaaccgacaacaacaactcattt-cacatcatcaactcatgatttatgaacacccaagctatgaatcatcaacaacaatatct 27551  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaa 215  Q
    || | |||||||| |||||||| |||| |||||| || | ||||||||||||||    
T  27552 cttaacaacaacatcatcaatt-aaacatgattctcatcacaattcaacaacaa 27604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 7271 - 7355
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    ||||||||||||| ||||||||||| ||| |||| ||||||||| ||||| | ||| || |||| ||||| ||| |||||||||||    
T  7271 caacaacaacatccattgaaacttgtttctcacctcaattcaac-acaacttatcacaaatcattaattaggcaaaatttcacaac 7355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 225
Target Start/End: Original strand, 2473 - 2572
Alignment:
Q  125 tgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcata 224  Q
    |||| ||||||||||| | |||| | |||||||||  || |||||||||||||||||||||| | || ||| || |  |||||||||||||||| |||||    
T  2473 tgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaa-catggttctcatcataattcaacaacaacatatcata 2571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 218
Target Start/End: Complemental strand, 7966 - 7812
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| || ||||||||||| |||| | || ||  || ||||||| | ||||||||||||| || | |||| | |||||| || |    
T  7966 atcaacccattttcacaaaaccaacaacaacaacttattt-cacatcacaaactcatgatttatgaacacccaagctatgaatcatcaacaacaatatct 7868  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    || | ||||||||||||||||| |||| |||||| || | ||| |||||||||||||    
T  7867 cttaacaacaacaacatcaatt-aaacatgattctcatcacaaatcaacaacaacat 7812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 1659 - 1619
Alignment:
Q  205 ttcaacaacaacatgtcataagtcatcaattaagcataatt 245  Q
    ||||||||||||||||||||| ||||||||| |||||||||    
T  1659 ttcaacaacaacatgtcataattcatcaattgagcataatt 1619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 214
Target Start/End: Original strand, 7358 - 7508
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| || ||||||||||| |||| |||| || ||| ||||||| | |||  ||||||||||| | |||| | |||||| || |    
T  7358 atcaacccatttttacaaaaccaacaacaacaacttattt-ctcatcatcaaatcatgatttatgagtacccaagccatgaatcattagcaacaatatct 7456  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaaca 214  Q
    || ||||||| ||||||||||| |||| |||||| || |  ||||||||||||    
T  7457 cttagcaacaccaacatcaatt-aaacatgattctcatcataattcaacaaca 7508  T

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Target: scaffold0253; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 214
Target Start/End: Original strand, 16783 - 16933
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaa-tcatgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| || ||||||||||| |||| |||| || ||| ||||||| | |||  ||||||||||| | |||| | |||||| || |    
T  16783 atcaacccatttttacaaaaccaacaacaacaacttattt-ctcatcatcaaatcatgatttatgagtacccaagccatgaatcattagcaacaatatct 16881  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaaca 214  Q
    || ||||||| ||||||||||| |||| |||||| || |  ||||||||||||    
T  16882 cttagcaacaccaacatcaatt-aaacatgattctcatcataattcaacaaca 16933  T

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Target: scaffold0148 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 37538 - 37668
Alignment:
Q  87 caacaacaactcattttctcaacaacaat-catgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattga 185  Q
    |||||||||||||||| |||| || |||| |||||| | ||||||||||||| || | |||| | |||||| || ||| | ||||||||||||||||| |    
T  37538 caacaacaactcattt-ctcatcatcaattcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt-a 37635  T
Q  186 aacttgattcacaccccaattcaacaacaacat 218  Q
    ||| |||||| |  | ||||||||||| |||||    
T  37636 aacatgattctcgtctcaattcaacaataacat 37668  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 85489 - 85643
Alignment:
Q  64 atcaacccatttt-acaaaatcaccaacaacaactcattttctcaacaacaatc-atgatatgtgaacacccaagccataattcatgatcaacaacatat 161  Q
    ||||||||||||| |||||| || ||||||||||  ||||| ||| |||||| | ||||| | |||||||||||| ||| | |||| | |||||| || |    
T  85489 atcaacccatttttacaaaaccaacaacaacaacctatttt-tcatcaacaaaccatgatttatgaacacccaagtcatgaatcatcaacaacaatatct 85587  T
Q  162 ctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    || ||||||||||| |||| || |||| |||||| || |  ||||||||||||||||    
T  85588 cttagcaacaacaatatcactt-aaacatgattctcatcataattcaacaacaacat 85643  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 12694 - 12734
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaacccatttta 77  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  12694 acatcatcaaaatcaaacttcttcactatcaacccatttta 12734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 6622 - 6740
Alignment:
Q  68 acccattttacaaaatcaccaacaacaactcattttctcaacaac-aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcag 166  Q
    ||||| ||||||||| |||||||||||||||| ||||||| |||| ||||||||  | ||| |||||||||||| | |||| | ||| |||||  || ||    
T  6622 acccagtttacaaaaccaccaacaacaactca-tttctcatcaacaaatcatgaattatgaccacccaagccatgaatcatcaacaaaaacatcacttag 6720  T
Q  167 caacaacaacatcaattgaa 186  Q
     |  ||||||||||||||||    
T  6721 gagtaacaacatcaattgaa 6740  T

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Target: scaffold0151 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 22609 - 22559
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacat 218  Q
    ||||||||||||||||| |||| ||||||||| | |||||||||||||||||    
T  22609 caacaacaacatcaatt-aaacatgattcacatctcaattcaacaacaacat 22559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 72
Target Start/End: Complemental strand, 3427 - 3392
Alignment:
Q  37 acatcatcaaaatcaaacttcttctttatcaaccca 72  Q
    |||||||||||||||||||||||| |||||||||||    
T  3427 acatcatcaaaatcaaacttcttcattatcaaccca 3392  T

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Target: scaffold0447 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 4581 - 4643
Alignment:
Q  125 tgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaa 187  Q
    |||||||||||||||| | |||| | |||||| ||  || |||||||||||||||||||||||    
T  4581 tgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaaa 4643  T

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Target: scaffold0447; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 9195 - 9257
Alignment:
Q  125 tgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaa 187  Q
    |||||||||||||||| | |||| | |||||| ||  || |||||||||||||||||||||||    
T  9195 tgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaaa 9257  T

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Target: scaffold0387 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 1187 - 1117
Alignment:
Q  113 aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaatt 183  Q
    ||||||||| | |||||||||||||||| | |||| | |||||| ||  || |||||||||||||||||||    
T  1187 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatattccttagcaacaacaacatcaatt 1117  T

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Target: scaffold0243 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 2545 - 2436
Alignment:
Q  125 tgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcata 224  Q
    ||||| |||||||||| | |||| |||||||||||  || || ||||||||||||||||| ||| ||| ||  | |  ||||||||||||||||  ||||    
T  2545 tgaacgcccaagccatgaatcatcatcaacaacatcacttaggaacaacaacatcaattg-aacatgagtcttatcataattcaacaacaacatagcata 2447  T
Q  225 agtcatcaatt 235  Q
    | |||||||||    
T  2446 attcatcaatt 2436  T

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Target: scaffold0521 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 11100 - 11173
Alignment:
Q  113 aatcatgatatgtgaacacccaagccataattcatgatcaacaacatatctcagcaacaacaacatcaattgaa 186  Q
    ||||||||| | |||||||| ||||||| | |||| | |||||||||  |  ||||||||||||||||||||||    
T  11100 aatcatgatctatgaacacctaagccatgaatcataaacaacaacatcacatagcaacaacaacatcaattgaa 11173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 6659 - 6743
Alignment:
Q  167 caacaacaacatcaattgaaacttgattcacaccccaattcaacaacaacatgtcataagtcatcaattaagcataatttcacaac 252  Q
    |||||| |||||| ||||||||||| ||| |||| |||| |||| ||||| | ||| || |||| ||||||||| |||||||||||    
T  6659 caacaataacatccattgaaacttgtttctcacctcaatccaac-acaacttatcacaaatcattaattaagcaaaatttcacaac 6743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 44275 - 44234
Alignment:
Q  202 caattcaacaacaacatgtcataagtcatcaattaagcataa 243  Q
    |||||||||||||||||||||||| || |||||| |||||||    
T  44275 caattcaacaacaacatgtcataattcgtcaattgagcataa 44234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 203 - 243
Alignment:
Q  205 ttcaacaacaacatgtcataagtcatcaattaagcataatt 245  Q
    ||||||||||||||||||||| ||| ||||| |||||||||    
T  203 ttcaacaacaacatgtcataattcaacaattgagcataatt 243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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