View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0891_low_9 (Length: 268)

Name: NF0891_low_9
Description: NF0891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0891_low_9
NF0891_low_9
[»] scaffold0621 (1 HSPs)
scaffold0621 (102-161)||(7786-7845)
[»] scaffold0100 (3 HSPs)
scaffold0100 (103-161)||(23322-23380)
scaffold0100 (120-153)||(21355-21388)
scaffold0100 (104-139)||(21377-21412)
[»] chr6 (35 HSPs)
chr6 (103-161)||(22079369-22079427)
chr6 (103-161)||(27332144-27332202)
chr6 (103-161)||(27392884-27392942)
chr6 (104-161)||(25645542-25645599)
chr6 (103-153)||(20360289-20360339)
chr6 (103-161)||(20594997-20595055)
chr6 (104-153)||(1562549-1562598)
chr6 (106-149)||(23022597-23022640)
chr6 (119-161)||(17286629-17286671)
chr6 (102-148)||(19864239-19864285)
chr6 (103-153)||(25628164-25628214)
chr6 (104-153)||(19302360-19302409)
chr6 (120-153)||(22763190-22763223)
chr6 (104-153)||(28495286-28495335)
chr6 (120-153)||(29068619-29068652)
chr6 (104-153)||(29807695-29807744)
chr6 (120-153)||(31154230-31154263)
chr6 (104-148)||(25641025-25641069)
chr6 (116-159)||(16447431-16447474)
chr6 (116-159)||(19024634-19024677)
chr6 (121-159)||(4190177-4190215)
chr6 (122-159)||(3850687-3850724)
chr6 (122-159)||(13612709-13612746)
chr6 (122-159)||(15738433-15738470)
chr6 (122-159)||(15741213-15741250)
chr6 (103-148)||(16928351-16928395)
chr6 (103-148)||(16964078-16964122)
chr6 (120-149)||(19653442-19653471)
chr6 (103-148)||(22433522-22433567)
chr6 (122-159)||(23531577-23531614)
chr6 (104-159)||(12743549-12743605)
chr6 (103-139)||(12943521-12943557)
chr6 (104-148)||(15893261-15893305)
chr6 (104-148)||(16522204-16522248)
chr6 (104-148)||(22404891-22404935)
[»] chr7 (34 HSPs)
chr7 (104-161)||(18006880-18006937)
chr7 (104-153)||(10589954-10590003)
chr7 (104-161)||(16218541-16218598)
chr7 (102-159)||(3563209-3563266)
chr7 (104-153)||(15753713-15753762)
chr7 (104-161)||(16057570-16057627)
chr7 (104-149)||(809966-810011)
chr7 (104-161)||(15140857-15140914)
chr7 (104-161)||(47833025-47833082)
chr7 (103-159)||(12254613-12254669)
chr7 (104-149)||(68986-69031)
chr7 (25-66)||(3477368-3477409)
chr7 (104-153)||(9512586-9512635)
chr7 (104-153)||(12699981-12700030)
chr7 (104-161)||(15007278-15007334)
chr7 (120-161)||(15164020-15164061)
chr7 (104-139)||(44015443-44015478)
chr7 (120-153)||(13033922-13033955)
chr7 (104-148)||(11881522-11881566)
chr7 (104-148)||(16385075-16385119)
chr7 (104-148)||(18153644-18153688)
chr7 (116-159)||(38229190-38229233)
chr7 (104-146)||(11994906-11994948)
chr7 (119-161)||(34185650-34185692)
chr7 (119-161)||(34202028-34202070)
chr7 (122-159)||(3387794-3387831)
chr7 (122-159)||(10062561-10062598)
chr7 (103-143)||(41524165-41524206)
chr7 (120-149)||(44015425-44015454)
chr7 (104-148)||(14195500-14195544)
chr7 (104-148)||(14431153-14431197)
chr7 (104-148)||(15215185-15215229)
chr7 (104-148)||(19648293-19648337)
chr7 (104-143)||(41526627-41526667)
[»] chr1 (36 HSPs)
chr1 (103-160)||(33682255-33682312)
chr1 (104-161)||(22920693-22920750)
chr1 (104-163)||(21856697-21856756)
chr1 (104-161)||(16759952-16760009)
chr1 (104-153)||(21300355-21300404)
chr1 (103-139)||(21747220-21747256)
chr1 (120-159)||(34511028-34511067)
chr1 (120-161)||(20136433-20136474)
chr1 (120-153)||(22533523-22533556)
chr1 (104-148)||(20090241-20090285)
chr1 (103-135)||(20845901-20845933)
chr1 (104-148)||(21715814-21715858)
chr1 (104-148)||(38800260-38800304)
chr1 (116-159)||(21708471-21708514)
chr1 (116-159)||(21713014-21713057)
chr1 (104-147)||(22467534-22467577)
chr1 (104-135)||(46560549-46560580)
chr1 (101-159)||(14294391-14294449)
chr1 (102-148)||(18180928-18180974)
chr1 (122-159)||(1573612-1573649)
chr1 (103-148)||(3471727-3471772)
chr1 (122-159)||(12759215-12759252)
chr1 (122-159)||(13990095-13990132)
chr1 (116-149)||(16274249-16274282)
chr1 (104-149)||(17378338-17378383)
chr1 (106-139)||(21755317-21755350)
chr1 (128-161)||(22355026-22355059)
chr1 (120-153)||(27249564-27249597)
chr1 (116-149)||(40390530-40390563)
chr1 (104-149)||(41048789-41048834)
chr1 (115-148)||(42864046-42864079)
chr1 (104-161)||(50209032-50209089)
chr1 (98-135)||(51084439-51084476)
chr1 (104-148)||(17726250-17726294)
chr1 (103-131)||(20249543-20249571)
chr1 (120-148)||(21027933-21027961)
[»] scaffold0273 (1 HSPs)
scaffold0273 (101-161)||(8289-8349)
[»] chr3 (55 HSPs)
chr3 (101-161)||(14454448-14454508)
chr3 (104-161)||(15472149-15472206)
chr3 (104-153)||(20697264-20697313)
chr3 (104-161)||(43843427-43843484)
chr3 (103-159)||(49666926-49666982)
chr3 (102-148)||(32308892-32308938)
chr3 (103-148)||(1643500-1643545)
chr3 (104-153)||(13209146-13209195)
chr3 (104-161)||(25468767-25468824)
chr3 (104-159)||(40212540-40212595)
chr3 (103-149)||(9772904-9772950)
chr3 (120-161)||(183611-183652)
chr3 (103-161)||(9514011-9514069)
chr3 (103-161)||(9521986-9522044)
chr3 (104-153)||(13443456-13443505)
chr3 (120-161)||(14575664-14575705)
chr3 (120-161)||(14974124-14974165)
chr3 (120-161)||(15691422-15691463)
chr3 (44-95)||(25646975-25647026)
chr3 (104-146)||(11423583-11423625)
chr3 (103-149)||(16492986-16493032)
chr3 (119-153)||(17500594-17500628)
chr3 (120-153)||(17489117-17489150)
chr3 (104-161)||(52522567-52522624)
chr3 (104-148)||(320840-320884)
chr3 (101-159)||(8500644-8500703)
chr3 (100-131)||(14235742-14235773)
chr3 (116-159)||(24320700-24320743)
chr3 (122-161)||(42387616-42387655)
chr3 (103-149)||(37249944-37249990)
chr3 (103-148)||(12497528-12497573)
chr3 (128-161)||(12933153-12933186)
chr3 (44-97)||(14193225-14193278)
chr3 (128-161)||(16105027-16105060)
chr3 (103-148)||(16810654-16810699)
chr3 (103-148)||(17523991-17524036)
chr3 (116-149)||(17738522-17738555)
chr3 (120-153)||(18439787-18439820)
chr3 (116-149)||(19039842-19039875)
chr3 (122-159)||(23275889-23275926)
chr3 (122-159)||(54587259-54587296)
chr3 (122-159)||(55477718-55477755)
chr3 (104-148)||(323806-323850)
chr3 (104-148)||(1464286-1464329)
chr3 (103-139)||(9534724-9534760)
chr3 (103-139)||(11400531-11400567)
chr3 (104-148)||(12174096-12174140)
chr3 (120-148)||(12400445-12400473)
chr3 (129-161)||(14573838-14573870)
chr3 (103-139)||(14974154-14974190)
chr3 (104-148)||(15876639-15876683)
chr3 (104-148)||(18939597-18939641)
chr3 (104-148)||(23409697-23409741)
chr3 (104-148)||(26189813-26189857)
chr3 (119-151)||(30031081-30031113)
[»] chr8 (41 HSPs)
chr8 (102-161)||(23759676-23759735)
chr8 (104-159)||(21674908-21674963)
chr8 (104-149)||(16091163-16091208)
chr8 (102-159)||(21287454-21287511)
chr8 (103-159)||(7464561-7464617)
chr8 (103-161)||(21922744-21922802)
chr8 (103-161)||(23649796-23649854)
chr8 (104-161)||(6521613-6521670)
chr8 (104-153)||(18878115-18878164)
chr8 (103-148)||(22876321-22876366)
chr8 (104-149)||(26354514-26354559)
chr8 (104-153)||(20539542-20539591)
chr8 (104-161)||(38854076-38854133)
chr8 (103-149)||(21250668-21250714)
chr8 (103-148)||(19900271-19900316)
chr8 (103-148)||(20985345-20985390)
chr8 (104-153)||(23407637-23407686)
chr8 (104-139)||(6760536-6760571)
chr8 (104-135)||(15071788-15071819)
chr8 (102-161)||(16800698-16800756)
chr8 (102-149)||(28629273-28629320)
chr8 (106-148)||(16208500-16208542)
chr8 (119-149)||(31972492-31972522)
chr8 (119-153)||(45129861-45129895)
chr8 (120-161)||(6760506-6760547)
chr8 (122-159)||(13506835-13506872)
chr8 (120-153)||(18817242-18817275)
chr8 (103-148)||(19977694-19977739)
chr8 (103-148)||(21167546-21167591)
chr8 (104-149)||(21256469-21256514)
chr8 (122-159)||(21492183-21492220)
chr8 (128-161)||(21859351-21859384)
chr8 (116-149)||(22967196-22967229)
chr8 (122-159)||(26222015-26222052)
chr8 (120-153)||(27124310-27124343)
chr8 (128-161)||(40398500-40398533)
chr8 (104-148)||(17925515-17925559)
chr8 (104-148)||(21373547-21373591)
chr8 (104-148)||(24756986-24757030)
chr8 (104-148)||(30642071-30642115)
chr8 (103-139)||(44478024-44478060)
[»] scaffold1326 (1 HSPs)
scaffold1326 (103-161)||(157-215)
[»] scaffold0894 (1 HSPs)
scaffold0894 (103-153)||(826-876)
[»] scaffold0775 (1 HSPs)
scaffold0775 (99-161)||(4793-4855)
[»] scaffold0024 (1 HSPs)
scaffold0024 (103-161)||(100412-100470)
[»] chr5 (26 HSPs)
chr5 (103-161)||(21985053-21985111)
chr5 (104-161)||(21328361-21328418)
chr5 (104-149)||(22145293-22145338)
chr5 (103-159)||(20025690-20025746)
chr5 (102-159)||(26010850-26010907)
chr5 (104-148)||(22958380-22958424)
chr5 (102-161)||(24494776-24494835)
chr5 (119-161)||(1097689-1097731)
chr5 (103-161)||(9079197-9079255)
chr5 (103-149)||(25422792-25422838)
chr5 (103-139)||(19670102-19670138)
chr5 (119-161)||(13026510-13026552)
chr5 (119-161)||(13096694-13096736)
chr5 (119-153)||(23389327-23389361)
chr5 (103-161)||(26739453-26739511)
chr5 (119-153)||(39870486-39870520)
chr5 (104-153)||(21290681-21290730)
chr5 (104-148)||(14080347-14080391)
chr5 (104-148)||(26705320-26705364)
chr5 (104-148)||(26975053-26975097)
chr5 (116-159)||(36153750-36153793)
chr5 (120-149)||(19670084-19670113)
chr5 (104-161)||(25432642-25432699)
chr5 (103-131)||(6554861-6554889)
chr5 (104-148)||(21365467-21365511)
chr5 (104-148)||(37779013-37779057)
[»] scaffold0876 (1 HSPs)
scaffold0876 (104-161)||(1899-1956)
[»] scaffold0320 (1 HSPs)
scaffold0320 (104-161)||(13252-13309)
[»] scaffold0162 (1 HSPs)
scaffold0162 (104-161)||(25081-25138)
[»] scaffold0151 (2 HSPs)
scaffold0151 (104-161)||(11390-11447)
scaffold0151 (103-131)||(10512-10540)
[»] scaffold0075 (2 HSPs)
scaffold0075 (104-161)||(50357-50414)
scaffold0075 (104-145)||(7133-7174)
[»] scaffold0021 (3 HSPs)
scaffold0021 (104-161)||(71384-71441)
scaffold0021 (104-148)||(176024-176068)
scaffold0021 (104-148)||(62847-62891)
[»] chr4 (34 HSPs)
chr4 (104-161)||(10634-10691)
chr4 (104-161)||(43197486-43197543)
chr4 (103-161)||(14927565-14927623)
chr4 (104-149)||(8847604-8847649)
chr4 (104-161)||(14039867-14039924)
chr4 (101-161)||(15092091-15092151)
chr4 (102-161)||(39705120-39705179)
chr4 (116-161)||(7799871-7799916)
chr4 (104-161)||(12286971-12287028)
chr4 (104-149)||(16597881-16597926)
chr4 (103-161)||(7090111-7090169)
chr4 (103-153)||(16238860-16238910)
chr4 (103-161)||(17239253-17239311)
chr4 (104-148)||(155405-155449)
chr4 (101-148)||(23844727-23844774)
chr4 (104-138)||(15463750-15463784)
chr4 (102-148)||(17054258-17054304)
chr4 (119-153)||(44054042-44054076)
chr4 (104-153)||(12903998-12904047)
chr4 (120-161)||(16376355-16376396)
chr4 (104-149)||(52242037-52242082)
chr4 (103-135)||(3486316-3486348)
chr4 (104-148)||(14052053-14052097)
chr4 (116-159)||(3838442-3838485)
chr4 (103-146)||(15867485-15867528)
chr4 (120-159)||(23802087-23802126)
chr4 (119-149)||(3097866-3097896)
chr4 (122-159)||(14872983-14873020)
chr4 (103-148)||(16355751-16355796)
chr4 (122-159)||(44616517-44616554)
chr4 (122-159)||(54797553-54797590)
chr4 (103-139)||(15535511-15535547)
chr4 (104-148)||(16347522-16347566)
chr4 (104-148)||(46644092-46644135)
[»] chr2 (23 HSPs)
chr2 (104-153)||(23287104-23287153)
chr2 (103-159)||(24078152-24078208)
chr2 (103-161)||(23061578-23061636)
chr2 (104-153)||(23653226-23653275)
chr2 (104-161)||(7680539-7680596)
chr2 (104-161)||(23077664-23077721)
chr2 (101-149)||(28291115-28291163)
chr2 (104-161)||(23705111-23705168)
chr2 (104-161)||(24688093-24688150)
chr2 (122-161)||(22133055-22133094)
chr2 (119-161)||(36977-37019)
chr2 (104-149)||(22730052-22730097)
chr2 (103-148)||(22757522-22757567)
chr2 (104-149)||(23067415-23067460)
chr2 (104-153)||(27754748-27754797)
chr2 (122-159)||(572628-572665)
chr2 (120-161)||(23661375-23661416)
chr2 (122-159)||(24941922-24941959)
chr2 (103-148)||(25962519-25962564)
chr2 (116-149)||(43138618-43138651)
chr2 (103-139)||(6484115-6484151)
chr2 (121-161)||(20518965-20519005)
chr2 (125-153)||(22737019-22737047)
[»] scaffold0078 (1 HSPs)
scaffold0078 (103-159)||(11773-11829)
[»] scaffold0020 (2 HSPs)
scaffold0020 (105-161)||(14667-14723)
scaffold0020 (103-148)||(179909-179954)
[»] scaffold0056 (2 HSPs)
scaffold0056 (103-153)||(16030-16080)
scaffold0056 (103-148)||(12880-12925)
[»] scaffold0012 (2 HSPs)
scaffold0012 (103-161)||(228722-228780)
scaffold0012 (104-153)||(227799-227848)
[»] scaffold0628 (1 HSPs)
scaffold0628 (104-161)||(1696-1753)
[»] scaffold0556 (1 HSPs)
scaffold0556 (104-149)||(8043-8088)
[»] scaffold0324 (3 HSPs)
scaffold0324 (104-153)||(656-705)
scaffold0324 (103-148)||(16649-16694)
scaffold0324 (120-148)||(3619-3647)
[»] scaffold0247 (2 HSPs)
scaffold0247 (104-161)||(5644-5701)
scaffold0247 (122-159)||(16928-16965)
[»] scaffold0211 (1 HSPs)
scaffold0211 (104-149)||(27784-27829)
[»] scaffold0122 (2 HSPs)
scaffold0122 (104-153)||(32313-32362)
scaffold0122 (104-159)||(24882-24937)
[»] scaffold0084 (2 HSPs)
scaffold0084 (104-161)||(11403-11460)
scaffold0084 (103-161)||(4900-4958)
[»] scaffold0555 (2 HSPs)
scaffold0555 (104-163)||(9386-9445)
scaffold0555 (104-148)||(1839-1883)
[»] scaffold0507 (1 HSPs)
scaffold0507 (104-159)||(7057-7112)
[»] scaffold0145 (1 HSPs)
scaffold0145 (104-159)||(8501-8556)
[»] scaffold0346 (1 HSPs)
scaffold0346 (103-149)||(16549-16595)
[»] scaffold0333 (1 HSPs)
scaffold0333 (103-149)||(15184-15230)
[»] scaffold0228 (3 HSPs)
scaffold0228 (103-161)||(5727-5785)
scaffold0228 (103-161)||(13309-13367)
scaffold0228 (103-161)||(23261-23319)
[»] scaffold0206 (1 HSPs)
scaffold0206 (103-153)||(30598-30648)
[»] scaffold0120 (2 HSPs)
scaffold0120 (103-161)||(10610-10668)
scaffold0120 (120-161)||(17330-17371)
[»] scaffold0070 (1 HSPs)
scaffold0070 (106-148)||(5791-5833)
[»] scaffold0627 (1 HSPs)
scaffold0627 (104-161)||(1140-1197)
[»] scaffold0490 (1 HSPs)
scaffold0490 (104-149)||(3169-3214)
[»] scaffold0364 (1 HSPs)
scaffold0364 (104-161)||(16491-16548)
[»] scaffold0028 (5 HSPs)
scaffold0028 (116-161)||(642-687)
scaffold0028 (122-159)||(135439-135476)
scaffold0028 (122-159)||(137908-137945)
scaffold0028 (122-159)||(140377-140414)
scaffold0028 (122-159)||(142846-142883)
[»] scaffold0163 (1 HSPs)
scaffold0163 (102-149)||(26038-26085)
[»] scaffold0007 (2 HSPs)
scaffold0007 (102-149)||(24396-24443)
scaffold0007 (116-149)||(159971-160004)
[»] scaffold1401 (1 HSPs)
scaffold1401 (103-153)||(1287-1337)
[»] scaffold0737 (1 HSPs)
scaffold0737 (103-161)||(551-609)
[»] scaffold0476 (1 HSPs)
scaffold0476 (103-161)||(9022-9080)
[»] scaffold0278 (1 HSPs)
scaffold0278 (101-139)||(9479-9517)
[»] scaffold0088 (1 HSPs)
scaffold0088 (103-153)||(22118-22168)
[»] scaffold0026 (2 HSPs)
scaffold0026 (119-161)||(31483-31525)
scaffold0026 (104-149)||(53418-53463)
[»] scaffold2044 (1 HSPs)
scaffold2044 (104-153)||(273-322)
[»] scaffold0914 (1 HSPs)
scaffold0914 (104-161)||(3525-3582)
[»] scaffold0427 (1 HSPs)
scaffold0427 (104-161)||(14681-14738)
[»] scaffold0395 (1 HSPs)
scaffold0395 (104-153)||(14614-14663)
[»] scaffold0231 (1 HSPs)
scaffold0231 (102-139)||(11670-11707)
[»] scaffold0080 (1 HSPs)
scaffold0080 (120-161)||(45170-45211)
[»] scaffold0074 (1 HSPs)
scaffold0074 (104-153)||(29046-29095)
[»] scaffold0011 (1 HSPs)
scaffold0011 (104-153)||(53167-53216)
[»] scaffold0207 (2 HSPs)
scaffold0207 (103-139)||(1460-1496)
scaffold0207 (120-149)||(1485-1514)
[»] scaffold0637 (2 HSPs)
scaffold0637 (104-139)||(3248-3283)
scaffold0637 (120-161)||(3218-3259)
[»] scaffold1355 (1 HSPs)
scaffold1355 (119-153)||(363-397)
[»] scaffold0389 (1 HSPs)
scaffold0389 (119-153)||(12487-12521)
[»] scaffold0309 (1 HSPs)
scaffold0309 (111-149)||(7835-7873)
[»] scaffold0053 (1 HSPs)
scaffold0053 (103-161)||(35188-35246)
[»] scaffold0016 (2 HSPs)
scaffold0016 (119-153)||(3107-3141)
scaffold0016 (104-134)||(199568-199598)
[»] scaffold1800 (2 HSPs)
scaffold1800 (120-161)||(253-294)
scaffold1800 (104-139)||(283-318)
[»] scaffold1257 (1 HSPs)
scaffold1257 (120-161)||(1130-1171)
[»] scaffold0461 (1 HSPs)
scaffold0461 (116-161)||(12881-12926)
[»] scaffold0367 (1 HSPs)
scaffold0367 (102-159)||(11955-12012)
[»] scaffold0217 (1 HSPs)
scaffold0217 (120-161)||(14675-14716)
[»] scaffold0121 (1 HSPs)
scaffold0121 (104-153)||(7349-7398)
[»] scaffold0066 (1 HSPs)
scaffold0066 (120-161)||(68455-68496)
[»] scaffold0031 (4 HSPs)
scaffold0031 (103-148)||(64600-64645)
scaffold0031 (122-159)||(55905-55942)
scaffold0031 (104-148)||(19282-19325)
scaffold0031 (104-148)||(51879-51923)
[»] scaffold0351 (1 HSPs)
scaffold0351 (104-148)||(17600-17644)
[»] scaffold0174 (1 HSPs)
scaffold0174 (104-148)||(16112-16156)
[»] scaffold0167 (1 HSPs)
scaffold0167 (104-148)||(35200-35244)
[»] scaffold0042 (3 HSPs)
scaffold0042 (104-159)||(25778-25834)
scaffold0042 (103-148)||(40358-40403)
scaffold0042 (104-148)||(33686-33730)
[»] scaffold0010 (1 HSPs)
scaffold0010 (103-139)||(131185-131221)
[»] scaffold0004 (1 HSPs)
scaffold0004 (104-148)||(71063-71107)
[»] scaffold0001 (2 HSPs)
scaffold0001 (103-139)||(161813-161849)
scaffold0001 (120-149)||(161795-161824)
[»] scaffold0261 (1 HSPs)
scaffold0261 (116-159)||(16855-16898)
[»] scaffold0150 (1 HSPs)
scaffold0150 (104-135)||(31157-31188)
[»] scaffold0102 (2 HSPs)
scaffold0102 (104-139)||(20522-20557)
scaffold0102 (104-148)||(47290-47334)
[»] scaffold0101 (2 HSPs)
scaffold0101 (116-159)||(166-209)
scaffold0101 (103-148)||(7772-7817)
[»] scaffold0358 (1 HSPs)
scaffold0358 (119-149)||(5964-5994)
[»] scaffold0357 (1 HSPs)
scaffold0357 (103-161)||(14974-15032)
[»] scaffold0165 (1 HSPs)
scaffold0165 (103-161)||(26490-26548)
[»] scaffold0114 (2 HSPs)
scaffold0114 (103-149)||(14290-14336)
scaffold0114 (122-159)||(39137-39174)
[»] scaffold0098 (1 HSPs)
scaffold0098 (104-146)||(30016-30058)
[»] scaffold1434 (1 HSPs)
scaffold1434 (120-153)||(496-529)
[»] scaffold0970 (1 HSPs)
scaffold0970 (103-148)||(1804-1848)
[»] scaffold0671 (1 HSPs)
scaffold0671 (103-148)||(7480-7525)
[»] scaffold0254 (1 HSPs)
scaffold0254 (103-143)||(19518-19559)
[»] scaffold0241 (1 HSPs)
scaffold0241 (103-148)||(10236-10281)
[»] scaffold0161 (1 HSPs)
scaffold0161 (103-144)||(35873-35914)
[»] scaffold0106 (2 HSPs)
scaffold0106 (103-148)||(13731-13776)
scaffold0106 (120-148)||(16906-16934)
[»] scaffold0043 (1 HSPs)
scaffold0043 (103-148)||(19509-19554)
[»] scaffold0035 (1 HSPs)
scaffold0035 (122-159)||(68723-68760)
[»] scaffold0032 (1 HSPs)
scaffold0032 (120-149)||(52827-52856)
[»] scaffold1052 (1 HSPs)
scaffold1052 (125-153)||(1813-1841)
[»] scaffold0810 (1 HSPs)
scaffold0810 (104-148)||(5096-5139)
[»] scaffold0622 (1 HSPs)
scaffold0622 (104-148)||(6648-6692)
[»] scaffold0480 (1 HSPs)
scaffold0480 (104-148)||(500-544)
[»] scaffold0403 (1 HSPs)
scaffold0403 (120-148)||(6099-6127)
[»] scaffold0289 (1 HSPs)
scaffold0289 (104-148)||(3276-3320)
[»] scaffold0233 (1 HSPs)
scaffold0233 (123-159)||(22036-22072)
[»] scaffold0220 (1 HSPs)
scaffold0220 (104-148)||(3759-3803)
[»] scaffold0179 (2 HSPs)
scaffold0179 (104-159)||(8994-9050)
scaffold0179 (104-159)||(13928-13984)
[»] scaffold0149 (2 HSPs)
scaffold0149 (104-148)||(4967-5011)
scaffold0149 (104-148)||(9398-9442)
[»] scaffold0146 (1 HSPs)
scaffold0146 (120-148)||(25016-25044)
[»] scaffold0113 (1 HSPs)
scaffold0113 (120-148)||(33313-33341)
[»] scaffold0079 (1 HSPs)
scaffold0079 (104-148)||(45295-45339)


Alignment Details
Target: scaffold0621 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 7845 - 7786
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7845 attgtaacgccctctttgaattatttaattatttaattgagtctagaagttattaagatg 7786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 23322 - 23380
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23322 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttattaagatg 23380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 21388 - 21355
Alignment:
Q  120 aattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||||||||||||||||||||||||||    
T  21388 aattatttaattatttaattgagtctagaagtta 21355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 21412 - 21377
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaatt 139  Q
    ||||||||||| ||||||||||||||||||||||||    
T  21412 tgtaacgccctatttgaattatttaattatttaatt 21377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 22079369 - 22079427
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22079369 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttattaagatg 22079427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 27332144 - 27332202
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27332144 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttattaagatg 27332202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 27392884 - 27392942
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27392884 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttattaagatg 27392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 25645599 - 25645542
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  25645599 tgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 25645542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 20360289 - 20360339
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20360289 ttgtaacgctctctttgaattatttaattatttaattgagtctagaagtta 20360339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 20595055 - 20594997
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||    
T  20595055 ttgtaacgccctttttgaattatttaattatttaattgagtctagaatttattaagatg 20594997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 1562598 - 1562549
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1562598 tgtaacgccctttttgaattatttaattatttaattgagtctagaagtta 1562549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 23022640 - 23022597
Alignment:
Q  106 taacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23022640 taacgccctctttgaattatttaattatttaattgagtctagaa 23022597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 17286629 - 17286671
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  17286629 gaattatttaattatttaattgagtctagaagttattaagatg 17286671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 19864285 - 19864239
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||    
T  19864285 attgtaacgcccacttttaattatttaattatttaattgagtctaga 19864239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 25628164 - 25628214
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||  || |||||||||||||||||||||||||||||||||||    
T  25628164 ttgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 25628214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 19302360 - 19302409
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||    
T  19302360 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 19302409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 22763190 - 22763223
Alignment:
Q  120 aattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||||||||||||||||||||||||||    
T  22763190 aattatttaattatttaattgagtctagaagtta 22763223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 28495286 - 28495335
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || ||||||||||||||||||| |||||||||||||||    
T  28495286 tgtaacgcccgtttcgaattatttaattatttaaatgagtctagaagtta 28495335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 29068652 - 29068619
Alignment:
Q  120 aattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||||||||||||||||||||||||||    
T  29068652 aattatttaattatttaattgagtctagaagtta 29068619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 29807695 - 29807744
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || ||||||||||||||||||| |||||||||||||||    
T  29807695 tgtaacgcccgtttcgaattatttaattatttaaatgagtctagaagtta 29807744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 31154230 - 31154263
Alignment:
Q  120 aattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||||||||||||||||||||||||||    
T  31154230 aattatttaattatttaattgagtctagaagtta 31154263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 25641025 - 25641069
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||    
T  25641025 tgtaacgcccacttttaattaattaattatttaattgagtctaga 25641069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 16447431 - 16447474
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||    
T  16447431 tttgatttatttaattatttaattgagtctagaaattattaaga 16447474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 19024677 - 19024634
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||    
T  19024677 tttgatttatttaattatttaattgagtctagaatttattaaga 19024634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 159
Target Start/End: Complemental strand, 4190215 - 4190177
Alignment:
Q  121 attatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  4190215 attatttaattatttaattgagtctagaatttattaaga 4190177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 3850687 - 3850724
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  3850687 ttatttaattatttaattgagtctagaatttattaaga 3850724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 13612746 - 13612709
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  13612746 ttatttaattatttaattgagtctagaatttattaaga 13612709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 15738470 - 15738433
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  15738470 ttatttaattatttaattgagtctagaatttattaaga 15738433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 15741250 - 15741213
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  15741250 ttatttaattatttaattgagtctagaatttattaaga 15741213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 16928351 - 16928395
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| ||| || |||||||||||||||||||||||||||    
T  16928351 ttgtaacgcccgcttcga-ttatttaattatttaattgagtctaga 16928395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 16964078 - 16964122
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| ||| || |||||||||||||||||||||||||||    
T  16964078 ttgtaacgcccgcttcga-ttatttaattatttaattgagtctaga 16964122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 19653471 - 19653442
Alignment:
Q  120 aattatttaattatttaattgagtctagaa 149  Q
    ||||||||||||||||||||||||||||||    
T  19653471 aattatttaattatttaattgagtctagaa 19653442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 22433567 - 22433522
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||| |||| |||| ||||||||| |||||||||||||||||||    
T  22433567 ttgtaaggcccacttttaattatttagttatttaattgagtctaga 22433522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 23531577 - 23531614
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  23531577 ttatttaattatttaattgagtctagaatttattaaga 23531614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 12743605 - 12743549
Alignment:
Q  104 tgtaacgccctctttgaattatt-taattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||  | ||||||||||||||||| || ||| |||||    
T  12743605 tgtaacgccctctttgaattattagatttatttaattgagtctaaaatttattaaga 12743549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 12943557 - 12943521
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaatt 139  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  12943557 ttgtaacgccctccttgaattatttgattatttaatt 12943521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 15893261 - 15893305
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| | ||| |||||||||||||||||||||||    
T  15893261 tgtaacgcccacttttatttaattaattatttaattgagtctaga 15893305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 16522204 - 16522248
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| | ||| |||||||||||||||||||||||    
T  16522204 tgtaacgcccacttttacttaattaattatttaattgagtctaga 16522248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 22404891 - 22404935
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| ||||  |||| |||||||||||||||||||||||    
T  22404891 tgtaacgcccactttttattagttaattatttaattgagtctaga 22404935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 18006937 - 18006880
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18006937 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttattaagatg 18006880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 10590003 - 10589954
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10590003 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 10589954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 16218541 - 16218598
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  16218541 tgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 16218598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 3563209 - 3563266
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||    
T  3563209 attgtaacgtcctctttgaattatttaattatttaattgagtctagaatttattaaga 3563266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 15753713 - 15753762
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15753713 tgtaacgccctttttgaattatttaattatttaattgagtctagaagtta 15753762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 16057627 - 16057570
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  16057627 tgtaacgccctctttgagttatttaattatttaattgagtctagaatttattaagatg 16057570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 809966 - 810011
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  809966 tgtaacgctctctttgaattatttaattatttaattgagtctagaa 810011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 15140857 - 15140914
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||    
T  15140857 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaagttattaagatg 15140914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 47833082 - 47833025
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||||    
T  47833082 tgtaacgccctctttaaattatttaattatttaaatgagtctagaatttattaagatg 47833025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 12254613 - 12254669
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  12254613 ttgtaatgccctctttgaattatttaattatttaattgactctagaatttattaaga 12254669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 69031 - 68986
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||    
T  69031 tgtaacgtcctctttgaattatttaattatttaactgagtctagaa 68986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 3477409 - 3477368
Alignment:
Q  25 catcaccacctcacaccaaacctccaaatgaatcccatgata 66  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  3477409 catcaccacctcacaccaaacctccaaatggatcccatgata 3477368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 9512635 - 9512586
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||    
T  9512635 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 9512586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 12700030 - 12699981
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||    
T  12700030 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 12699981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 15007278 - 15007334
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| ||| |||||||    
T  15007278 tgtaacgccctctttga-ttatttaattattttattgagtctagaatttattaagatg 15007334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 15164020 - 15164061
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  15164020 aattatttaattatttaattgagtctagaagttattaagatg 15164061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 44015478 - 44015443
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaatt 139  Q
    ||||||||||||||||||||||||||||||||||||    
T  44015478 tgtaacgccctctttgaattatttaattatttaatt 44015443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 13033955 - 13033922
Alignment:
Q  120 aattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||||||||||||||||||||||||||    
T  13033955 aattatttaattatttaattgagtctagaagtta 13033922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 11881566 - 11881522
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||    
T  11881566 tgtaacgcccacttttaattaattaattatttaattgagtctaga 11881522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 16385075 - 16385119
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||  || ||||||||||||||||||||||||||||||    
T  16385075 tgtaacgcccgtttcgaattatttaattatttaattgagtctaga 16385119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 18153644 - 18153688
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||    
T  18153644 tgtaacgcccacttttaattaattaattatttaattgagtctaga 18153688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 38229233 - 38229190
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||    
T  38229233 tttgatttatttaattatttaattgagtctagaatttattaaga 38229190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 11994906 - 11994948
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtcta 146  Q
    ||||||||||  || ||||||||||||||||||||||||||||    
T  11994906 tgtaacgcccgtttcgaattatttaattatttaattgagtcta 11994948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 34185692 - 34185650
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||| || ||| |||||||    
T  34185692 gaattatttaattatttaattgagtctataatttattaagatg 34185650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 34202070 - 34202028
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||| || ||| |||||||    
T  34202070 gaattatttaattatttaattgagtctataatttattaagatg 34202028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 3387831 - 3387794
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  3387831 ttatttaattatttaattgagtctagaatttattaaga 3387794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 10062561 - 10062598
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  10062561 ttatttaattatttaattgagtctagaatttattaaga 10062598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 41524206 - 41524165
Alignment:
Q  103 ttgtaacgccctctttgaattattt-aattatttaattgagt 143  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  41524206 ttgtaacgccctctttgaattatttgatttatttaattgagt 41524165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 44015454 - 44015425
Alignment:
Q  120 aattatttaattatttaattgagtctagaa 149  Q
    ||||||||||||||||||||||||||||||    
T  44015454 aattatttaattatttaattgagtctagaa 44015425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 14195544 - 14195500
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||||| ||||    
T  14195544 tgtaacgcccacttttaattaattaattatttaattgagtttaga 14195500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 14431197 - 14431153
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| | ||| |||||||||||||||||||||||    
T  14431197 tgtaacgcccacttttatttaattaattatttaattgagtctaga 14431153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 15215229 - 15215185
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| ||||||||||| |||||||||||    
T  15215229 tgtaacgcccacttttaattaattaattatttagttgagtctaga 15215185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 19648293 - 19648337
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| ||||||||||||||||| |||||    
T  19648293 tgtaacgcccacttttaattaattaattatttaattgagcctaga 19648337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 143
Target Start/End: Complemental strand, 41526667 - 41526627
Alignment:
Q  104 tgtaacgccctctttgaattattt-aattatttaattgagt 143  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  41526667 tgtaacgccctctttgaattatttgatttatttaattgagt 41526627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 33682312 - 33682255
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagat 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33682312 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttattaagat 33682255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 22920693 - 22920750
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22920693 tgtaatgccctctttgaattatttaattatttaattgagtctagaagttattaagatg 22920750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 21856697 - 21856756
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatggg 163  Q
    |||||||||||||||||||||||||||||||||| || |||||||| ||| |||||||||    
T  21856697 tgtaacgccctctttgaattatttaattatttaaatgtgtctagaatttattaagatggg 21856756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 16760009 - 16759952
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| ||| |||||||    
T  16760009 tgtaacgccctccttgaattatttaattatttagttgagtctagaatttattaagatg 16759952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 21300355 - 21300404
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||    
T  21300355 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 21300404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 21747256 - 21747220
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaatt 139  Q
    |||||||||||||||||||||||||||||||||||||    
T  21747256 ttgtaacgccctctttgaattatttaattatttaatt 21747220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 159
Target Start/End: Complemental strand, 34511067 - 34511028
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  34511067 aattatttaattatttaattgagtctagaagttattaaga 34511028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 20136474 - 20136433
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  20136474 aattatttaattatttaattgagtttagaagttattaagatg 20136433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 22533556 - 22533523
Alignment:
Q  120 aattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||||||||||||||||||||||||||    
T  22533556 aattatttaattatttaattgagtctagaagtta 22533523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 20090241 - 20090285
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||    
T  20090241 tgtaacgcccacttttaattaattaattatttaattgagtctaga 20090285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 20845901 - 20845933
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattattt 135  Q
    |||||||||||||||||||||||||||||||||    
T  20845901 ttgtaacgccctctttgaattatttaattattt 20845933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 21715858 - 21715814
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||    
T  21715858 tgtaacgcccacttttaattaattaattatttaattgagtctaga 21715814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 38800260 - 38800304
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||  || ||||||||||||||||||||||||||||||    
T  38800260 tgtaacgcccgtttcgaattatttaattatttaattgagtctaga 38800304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 21708514 - 21708471
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||    
T  21708514 tttgatttatttaattatttaattgagtctagaaattattaaga 21708471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 21713057 - 21713014
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||    
T  21713057 tttgatttatttaattatttaattgagtctagaaattattaaga 21713014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 22467534 - 22467577
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctag 147  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
T  22467534 tgtaacgcccacttttaattaattaattatttaattgagtctag 22467577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 135
Target Start/End: Complemental strand, 46560580 - 46560549
Alignment:
Q  104 tgtaacgccctctttgaattatttaattattt 135  Q
    ||||||||||||||||||||||||||||||||    
T  46560580 tgtaacgccctctttgaattatttaattattt 46560549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 14294391 - 14294449
Alignment:
Q  101 tattgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||||||||||   ||||| ||||||||||||||||||||||||| || ||| |||||    
T  14294391 tattgtaacgcctgttttgatttatttaattatttaattgagtctataatttattaaga 14294449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 18180928 - 18180974
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||||| |||| | ||| |||||||||||||||||||||||    
T  18180928 attgtaacgcccacttttatttaattaattatttaattgagtctaga 18180974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 1573612 - 1573649
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  1573612 ttatttaattatttaattgagtctagaatttattaaga 1573649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 3471727 - 3471772
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| | ||| |||||||||||||||||||||||    
T  3471727 ttgtaacgcccacttttatttaattaattatttaattgagtctaga 3471772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 12759252 - 12759215
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  12759252 ttatttaattatttaattgagtctagaatttattaaga 12759215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 13990132 - 13990095
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  13990132 ttatttaattatttaattgagtctagaatttattaaga 13990095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 149
Target Start/End: Original strand, 16274249 - 16274282
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaa 149  Q
    ||||| ||||||||||||||||||||||||||||    
T  16274249 tttgatttatttaattatttaattgagtctagaa 16274282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 17378338 - 17378383
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||||||||| ||| || ||||||||||||||||| ||||||||||    
T  17378338 tgtaacgcccgcttcgatttatttaattatttaatcgagtctagaa 17378383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 21755350 - 21755317
Alignment:
Q  106 taacgccctctttgaattatttaattatttaatt 139  Q
    ||||||| ||||||||||||||||||||||||||    
T  21755350 taacgccttctttgaattatttaattatttaatt 21755317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 161
Target Start/End: Original strand, 22355026 - 22355059
Alignment:
Q  128 aattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||| |||||||    
T  22355026 aattatttaattgagtctagaagttattaagatg 22355059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 27249564 - 27249597
Alignment:
Q  120 aattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||||| |||||||    
T  27249564 aattatttaattatttaattgagtcttgaagtta 27249597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 40390563 - 40390530
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaa 149  Q
    ||||| ||||||||||||||||||||||||||||    
T  40390563 tttgatttatttaattatttaattgagtctagaa 40390530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 41048789 - 41048834
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||| || ||||||||||||||||||||| ||| |||||||||    
T  41048789 tgtaacgtccactttgaattatttaattattttattaagtctagaa 41048834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 148
Target Start/End: Original strand, 42864046 - 42864079
Alignment:
Q  115 ctttgaattatttaattatttaattgagtctaga 148  Q
    |||| |||||||||||||||||||||||||||||    
T  42864046 cttttaattatttaattatttaattgagtctaga 42864079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 50209032 - 50209089
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||  || ||||||||||||||||||||| | | ||||||||| |||||||    
T  50209032 tgtaacgcccgtttcgaattatttaattatttaattaattatagaagttattaagatg 50209089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 51084476 - 51084439
Alignment:
Q  98 agatattgtaacgccctctttgaattatttaattattt 135  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  51084476 agatagtgtaacaccctctttgaattatttaattattt 51084439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 17726250 - 17726294
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||||| ||| ||||||||||||| |||||||||    
T  17726250 tgtaacgcccactttgatttaattaattatttaatcgagtctaga 17726294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 20249571 - 20249543
Alignment:
Q  103 ttgtaacgccctctttgaattatttaatt 131  Q
    |||||||||||||||||||||||||||||    
T  20249571 ttgtaacgccctctttgaattatttaatt 20249543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 148
Target Start/End: Complemental strand, 21027961 - 21027933
Alignment:
Q  120 aattatttaattatttaattgagtctaga 148  Q
    |||||||||||||||||||||||||||||    
T  21027961 aattatttaattatttaattgagtctaga 21027933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 8289 - 8349
Alignment:
Q  101 tattgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  8289 tattgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 8349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 14454508 - 14454448
Alignment:
Q  101 tattgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  14454508 tattgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 14454448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 15472206 - 15472149
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  15472206 tgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 15472149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 20697264 - 20697313
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20697264 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 20697313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 43843484 - 43843427
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  43843484 tgtaacgccctccttgaattatttaattatttaattgagtctagaagttattaagatg 43843427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 49666926 - 49666982
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49666926 ttgtaacaccctctttgaattatttaattatttaattgagtctagaagttattaaga 49666982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 32308938 - 32308892
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32308938 attgtaacgccctctttgaattatttaattatttaattgagtctaga 32308892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 1643500 - 1643545
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1643500 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 1643545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 13209146 - 13209195
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13209146 tgtaacgccctctttgaattatttcattatttaattgagtctagaagtta 13209195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 25468767 - 25468824
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  25468767 tgtaacgcccgttttgaattatttaattatttaattgagtctagaagttattaagatg 25468824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 40212540 - 40212595
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||    
T  40212540 tgtaacgccctccttgaattatttaattatttaattgagtctagaatttattaaga 40212595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 9772904 - 9772950
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  9772904 ttgtaatgccctctttgaattatttaattatttaattgagtctagaa 9772950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 183611 - 183652
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  183611 aattatttaattatttaattgagtctagaagttactaagatg 183652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 9514069 - 9514011
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||| ||||||||||||||| |||||||||||||| |||||| |||||| |||||||    
T  9514069 ttgtaaagccctctttgaattaattaattatttaattaagtctataagttagtaagatg 9514011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 9522044 - 9521986
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||| ||||||||||||||| |||||||||||||| |||||| |||||| |||||||    
T  9522044 ttgtaaagccctctttgaattaattaattatttaattaagtctataagttagtaagatg 9521986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 13443505 - 13443456
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||    
T  13443505 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 13443456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 14575664 - 14575705
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  14575664 aattatttaattatttaattgagtctagaagttattaagatg 14575705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 14974165 - 14974124
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  14974165 aattatttaattatttaattgagtctagaagttattaagatg 14974124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 15691422 - 15691463
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  15691422 aattatttaattatttaattgagtctagaagttattaagatg 15691463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 25647026 - 25646975
Alignment:
Q  44 acctccaaatgaatcccatgatagatccaccaccacaacaagcctcacacca 95  Q
    ||||||||| ||||||| ||||||||||||||||||| || |||||||||||    
T  25647026 acctccaaacgaatcccgtgatagatccaccaccacagcaggcctcacacca 25646975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 11423583 - 11423625
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtcta 146  Q
    ||||||||||  |||||||||||||||||||||||||||||||    
T  11423583 tgtaacgcccgttttgaattatttaattatttaattgagtcta 11423625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 16492986 - 16493032
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||||||||||  || |||||||||||||||||||||||||||||||    
T  16492986 ttgtaacgcccgtttcgaattatttaattatttaattgagtctagaa 16493032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 153
Target Start/End: Complemental strand, 17500628 - 17500594
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||||||||||||||    
T  17500628 gaattatttaattatttaattgagtctagaagtta 17500594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 17489150 - 17489117
Alignment:
Q  120 aattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||||||||||||||||||||||||||    
T  17489150 aattatttaattatttaattgagtctagaagtta 17489117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 52522567 - 52522624
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||  ||||| |||||||||||||| ||||||||||||| ||| |||||||    
T  52522567 tgtaacgcccgttttgatttatttaattattttattgagtctagaatttattaagatg 52522624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 320840 - 320884
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||    
T  320840 tgtaacgcccacttttaattaattaattatttaattgagtctaga 320884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 8500703 - 8500644
Alignment:
Q  101 tattgtaacgccctctttgaattattt-aattatttaattgagtctagaagttactaaga 159  Q
    ||||||||| ||||||||||||||||| | ||||||||||||||||| || ||| |||||    
T  8500703 tattgtaacaccctctttgaattatttgatttatttaattgagtctaaaatttattaaga 8500644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 131
Target Start/End: Complemental strand, 14235773 - 14235742
Alignment:
Q  100 atattgtaacgccctctttgaattatttaatt 131  Q
    ||||||||||||||||||||||||||||||||    
T  14235773 atattgtaacgccctctttgaattatttaatt 14235742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 24320700 - 24320743
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||    
T  24320700 tttgatttatttaattatttaattgagtctagaatttattaaga 24320743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 42387655 - 42387616
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  42387655 ttatttaattatttaattgagtctagaatttattaagatg 42387616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 37249944 - 37249990
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||||||||||  ||||| |||||||||||||| |||||||||||||    
T  37249944 ttgtaacgcccgttttgatttatttaattattttattgagtctagaa 37249990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 12497573 - 12497528
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| | ||| |||||||||||||||||||||||    
T  12497573 ttgtaacgcccacttttatttaattaattatttaattgagtctaga 12497528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 161
Target Start/End: Original strand, 12933153 - 12933186
Alignment:
Q  128 aattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||| |||||||    
T  12933153 aattatttaattgagtctagaagttattaagatg 12933186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 14193278 - 14193225
Alignment:
Q  44 acctccaaatgaatcccatgatagatccaccaccacaacaagcctcacaccacc 97  Q
    ||||||||| | ||||| ||| ||||||||||||||| || |||||||||||||    
T  14193278 acctccaaacggatcccgtgacagatccaccaccacagcaggcctcacaccacc 14193225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 16105060 - 16105027
Alignment:
Q  128 aattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||| |||||||    
T  16105060 aattatttaattgagtctagaagttattaagatg 16105027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 16810699 - 16810654
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| ||||  |||| |||||||||||||||||||||||    
T  16810699 ttgtaacgcccactttttattaattaattatttaattgagtctaga 16810654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 17523991 - 17524036
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| ||||| ||| |||||||||||||||||||    
T  17523991 ttgtaacgcccacttttaattaattagttatttaattgagtctaga 17524036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 17738555 - 17738522
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaa 149  Q
    ||||| ||||||||||||||||||||||||||||    
T  17738555 tttgatttatttaattatttaattgagtctagaa 17738522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 18439820 - 18439787
Alignment:
Q  120 aattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||| |||||||||    
T  18439820 aattatttaattatttaattgagtttagaagtta 18439787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 19039875 - 19039842
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaa 149  Q
    ||||| ||||||||||||||||||||||||||||    
T  19039875 tttgatttatttaattatttaattgagtctagaa 19039842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 23275926 - 23275889
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  23275926 ttatttaattatttaattgagtctagaatttattaaga 23275889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 54587296 - 54587259
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  54587296 ttatttaattatttaattgagtctagaatttattaaga 54587259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 55477755 - 55477718
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  55477755 ttatttaattatttaattgagtctagaatttattaaga 55477718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 323850 - 323806
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| | ||| |||||||||||||||||||||||    
T  323850 tgtaacgcccacttttatttaattaattatttaattgagtctaga 323806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 1464286 - 1464329
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||||    
T  1464286 tgtaacgccctcttt-aattatttaattattttattgagtttaga 1464329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 9534760 - 9534724
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaatt 139  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  9534760 ttgtaacgccctccttgaattatttgattatttaatt 9534724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 11400567 - 11400531
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaatt 139  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  11400567 ttgtaacgccctccttgaattatttgattatttaatt 11400531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 12174140 - 12174096
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| | ||| |||||||||||||||||||||||    
T  12174140 tgtaacgcccacttttatttaattaattatttaattgagtctaga 12174096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 148
Target Start/End: Complemental strand, 12400473 - 12400445
Alignment:
Q  120 aattatttaattatttaattgagtctaga 148  Q
    |||||||||||||||||||||||||||||    
T  12400473 aattatttaattatttaattgagtctaga 12400445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 14573870 - 14573838
Alignment:
Q  129 attatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||| |||||||    
T  14573870 attatttaattgagtctagaagttattaagatg 14573838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 14974190 - 14974154
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaatt 139  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  14974190 ttgttacgccctatttgaattatttaattatttaatt 14974154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 15876639 - 15876683
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||| ||| |||| ||||| |||||||||||||||||||||||    
T  15876639 tgtaacacccacttttaattaattaattatttaattgagtctaga 15876683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 18939641 - 18939597
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||| || |||| ||||| |||||||||||||||||||||||    
T  18939641 tgtaacgaccacttttaattaattaattatttaattgagtctaga 18939597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 23409741 - 23409697
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||  ||| ||||| |||||||||||||||||||||||    
T  23409741 tgtaacgcccaattttaattaattaattatttaattgagtctaga 23409697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 26189813 - 26189857
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| ||||  |||| |||||||||||||||||||||||    
T  26189813 tgtaacgcccactttttattaattaattatttaattgagtctaga 26189857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 151
Target Start/End: Complemental strand, 30031113 - 30031081
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagt 151  Q
    ||||||||||||||||||||||||| |||||||    
T  30031113 gaattatttaattatttaattgagtttagaagt 30031081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 7e-21; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 23759676 - 23759735
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23759676 attgtatcgccctctttgaattatttaattatttaattgagtctagaagttattaagatg 23759735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 21674963 - 21674908
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  21674963 tgtaacgccctctctgaattatttaattatttaattgagtctagaagttattaaga 21674908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 16091163 - 16091208
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16091163 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 16091208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 21287511 - 21287454
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  21287511 attgtaacaccctctttgaattatttaattatttaattgagtctagaatttattaaga 21287454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 7464561 - 7464617
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||    
T  7464561 ttgtaacgccctctttgaattatttaattatttaattgagtctataatttattaaga 7464617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 21922744 - 21922802
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||    
T  21922744 ttgtaacgcccgtttcgaattatttaattatttaattgagtctagaagttattaagatg 21922802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 23649854 - 23649796
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||| || || ||||||||||||||||||||||||||||||||||| |||||||    
T  23649854 ttgtaacgctcttttcgaattatttaattatttaattgagtctagaagttattaagatg 23649796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 6521670 - 6521613
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||| ||||||||||||||||||||||||||||||||| || ||| |||||||    
T  6521670 tgtaacgccttctttgaattatttaattatttaattgagtctataatttattaagatg 6521613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 18878115 - 18878164
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  18878115 tgtaacgcccattttgaattatttaattatttaattgagtctagaagtta 18878164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 22876366 - 22876321
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  22876366 ttgtaacgccctccttgaattatttaattatttaattgagtctaga 22876321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 26354514 - 26354559
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  26354514 tgtaacgccctctttgaattatctaattatttaattgagtctagaa 26354559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 20539591 - 20539542
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||    
T  20539591 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 20539542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 38854076 - 38854133
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||| ||||||||||||||||||||||||| ||||| ||||| ||| |||||||    
T  38854076 tgtaacgcactctttgaattatttaattatttaaatgagtttagaatttattaagatg 38854133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 21250714 - 21250668
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||||||||||  || |||||||||||||||||||||||||||||||    
T  21250714 ttgtaacgcccgtttcgaattatttaattatttaattgagtctagaa 21250668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 19900316 - 19900271
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||    
T  19900316 ttgtaacgcccacttttaattaattaattatttaattgagtctaga 19900271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 20985345 - 20985390
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||||    
T  20985345 ttgtaacgccctctttgaattatttatttatttatttgagtttaga 20985390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 23407686 - 23407637
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || |||||||||||||||||||||||||||| ||||||    
T  23407686 tgtaacgcccgtttcgaattatttaattatttaattgagtctaaaagtta 23407637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 6760571 - 6760536
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaatt 139  Q
    ||||||||| ||||||||||||||||||||||||||    
T  6760571 tgtaacgccttctttgaattatttaattatttaatt 6760536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 135
Target Start/End: Complemental strand, 15071819 - 15071788
Alignment:
Q  104 tgtaacgccctctttgaattatttaattattt 135  Q
    ||||||||||||||||||||||||||||||||    
T  15071819 tgtaacgccctctttgaattatttaattattt 15071788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 16800756 - 16800698
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||||  ||| |||||||    
T  16800756 attgtaacgccctctttga-ttatttaattattttattgagtttagagtttattaagatg 16800698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 28629273 - 28629320
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||||||||| |  || |||||||||||||||||||||||||||||||    
T  28629273 attgtaacgctcgtttcgaattatttaattatttaattgagtctagaa 28629320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 16208500 - 16208542
Alignment:
Q  106 taacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||  || ||||||||||||||||||||||||||||||    
T  16208500 taacgcccatttcgaattatttaattatttaattgagtctaga 16208542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 149
Target Start/End: Complemental strand, 31972522 - 31972492
Alignment:
Q  119 gaattatttaattatttaattgagtctagaa 149  Q
    |||||||||||||||||||||||||||||||    
T  31972522 gaattatttaattatttaattgagtctagaa 31972492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 45129861 - 45129895
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||||||| ||||||    
T  45129861 gaattatttaattatttaattgagtctataagtta 45129895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 6760547 - 6760506
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||| |||||||||||||| || |||||||    
T  6760547 aattatttaattatttgattgagtctagaagctattaagatg 6760506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 13506835 - 13506872
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  13506835 ttatttaattatttaattgagtctagaatttattaaga 13506872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 18817242 - 18817275
Alignment:
Q  120 aattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||| ||||||||||||||||||||||    
T  18817242 aattatttaatcatttaattgagtctagaagtta 18817275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 19977739 - 19977694
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| | ||| |||||||||||||||||||||||    
T  19977739 ttgtaacgcccacttttatttaattaattatttaattgagtctaga 19977694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 21167546 - 21167591
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||||||||| ||||| |  ||||||||||||||||||||    
T  21167546 ttgtaacgccctcttttaattaatcgattatttaattgagtctaga 21167591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 21256514 - 21256469
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||||||  ||| |||||||||||||||||| |||||||||||    
T  21256514 tgtaacgcccgttttaaattatttaattatttaactgagtctagaa 21256469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 21492220 - 21492183
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  21492220 ttatttaattatttaattgagtctagaatttattaaga 21492183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 161
Target Start/End: Original strand, 21859351 - 21859384
Alignment:
Q  128 aattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||| |||||||    
T  21859351 aattatttaattgagtctagaagttattaagatg 21859384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 22967229 - 22967196
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaa 149  Q
    ||||| ||||||||||||||||||||||||||||    
T  22967229 tttgatttatttaattatttaattgagtctagaa 22967196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 26222015 - 26222052
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  26222015 ttatttaattatttaattgagtctagaatttattaaga 26222052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 27124310 - 27124343
Alignment:
Q  120 aattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||| |||||||||    
T  27124310 aattatttaattatttaattgagtttagaagtta 27124343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 40398533 - 40398500
Alignment:
Q  128 aattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||| |||||||    
T  40398533 aattatttaattgagtctagaagttattaagatg 40398500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 17925515 - 17925559
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| | ||| |||||||||||||||||||||||    
T  17925515 tgtaacgcccacttttatttaattaattatttaattgagtctaga 17925559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 21373547 - 21373591
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||  || |||||| |||||||||||||||||||||||    
T  21373547 tgtaacgcccatttcgaattaattaattatttaattgagtctaga 21373591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 24757030 - 24756986
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| ||| |||||||||||||||||||    
T  24757030 tgtaacgcccacttttaattaattagttatttaattgagtctaga 24756986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 30642071 - 30642115
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| | ||| |||||||||||||||||||||||    
T  30642071 tgtaacgcccacttttatttaattaattatttaattgagtctaga 30642115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 44478060 - 44478024
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaatt 139  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  44478060 ttgtaacgccctccttgaattatttgattatttaatt 44478024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 215 - 157
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  215 ttgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0894 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 876 - 826
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  876 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 4793 - 4855
Alignment:
Q  99 gatattgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||    
T  4793 gatattgtaacgccctctttgaattatttaattatttaattgagtatagaatttattaagatg 4855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 100470 - 100412
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  100470 ttgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 100412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 21985053 - 21985111
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  21985053 ttgtaacgccctatttgaattatttaattatttaattgagtctagaagttattaagatg 21985111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 21328361 - 21328418
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  21328361 tgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 21328418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 22145338 - 22145293
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22145338 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 22145293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 20025690 - 20025746
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||    
T  20025690 ttgtaacgcccactttgaattatttaattatttaattgagtctagaatttattaaga 20025746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 26010850 - 26010907
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| ||| |||||    
T  26010850 attgtaacgcccgttttgaattatttaattatttaattgagtctagaacttattaaga 26010907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 22958380 - 22958424
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  22958380 tgtaatgccctctttgaattatttaattatttaattgagtctaga 22958424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 24494835 - 24494776
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||| || |||||||    
T  24494835 attgtaacgcccgtattgaattatttaattatttaattgagtctagaagatattaagatg 24494776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 1097731 - 1097689
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  1097731 gaattatttaattatttaattgagtctagaagttattaagatg 1097689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 9079255 - 9079197
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||  || |||||||||||||||||||||||||||| |||||| |||||||    
T  9079255 ttgtaacgcccgtttcgaattatttaattatttaattgagtctataagttattaagatg 9079197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 25422838 - 25422792
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||    
T  25422838 ttgtaacgcccgttttgaattatttaattatttaattgagtctagaa 25422792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 19670138 - 19670102
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaatt 139  Q
    |||||||||||||||||||||||||||||||||||||    
T  19670138 ttgtaacgccctctttgaattatttaattatttaatt 19670102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 13026552 - 13026510
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||| ||| |||||||    
T  13026552 gaattatttaattatttaattgagtctagaatttattaagatg 13026510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 13096736 - 13096694
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||| ||| |||||||    
T  13096736 gaattatttaattatttaattgagtctagaatttattaagatg 13096694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 23389327 - 23389361
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||||||||||||||    
T  23389327 gaattatttaattatttaattgagtctagaagtta 23389361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 26739453 - 26739511
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||  |||||| ||||  ||| |||||||    
T  26739453 ttgtaacgccctctttgaattatttaattattttgttgagtttagagtttattaagatg 26739511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 153
Target Start/End: Complemental strand, 39870520 - 39870486
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||||||||||||||    
T  39870520 gaattatttaattatttaattgagtctagaagtta 39870486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 21290681 - 21290730
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || |||||||||||||||||| ||||||||||||||||    
T  21290681 tgtaacgcccgtttcgaattatttaattatttagttgagtctagaagtta 21290730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 14080391 - 14080347
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||    
T  14080391 tgtaacgcccacttttaattaattaattatttaattgagtctaga 14080347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 26705364 - 26705320
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||    
T  26705364 tgtaacgcccacttttaattaattaattatttaattgagtctaga 26705320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 26975097 - 26975053
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||    
T  26975097 tgtaacgcccacttttaattaattaattatttaattgagtctaga 26975053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 36153750 - 36153793
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||    
T  36153750 tttgatttatttaattatttaattgagtctagaaattattaaga 36153793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 19670113 - 19670084
Alignment:
Q  120 aattatttaattatttaattgagtctagaa 149  Q
    ||||||||||||||||||||||||||||||    
T  19670113 aattatttaattatttaattgagtctagaa 19670084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 25432699 - 25432642
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||  || |||||||| ||||||||||||||||||| || ||| |||||||    
T  25432699 tgtaacgcccgtttcgaattattaaattatttaattgagtctataatttattaagatg 25432642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 6554889 - 6554861
Alignment:
Q  103 ttgtaacgccctctttgaattatttaatt 131  Q
    |||||||||||||||||||||||||||||    
T  6554889 ttgtaacgccctctttgaattatttaatt 6554861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 21365467 - 21365511
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| | ||| |||||||||||||||||||||||    
T  21365467 tgtaacgcccacttttatttaattaattatttaattgagtctaga 21365511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 37779057 - 37779013
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||  || |||||| |||||||||||||||||||||||    
T  37779057 tgtaacgcccgtttcgaattaattaattatttaattgagtctaga 37779013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 1899 - 1956
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  1899 tgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 1956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 13309 - 13252
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  13309 tgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 13252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 25081 - 25138
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  25081 tgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 25138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 11447 - 11390
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  11447 tgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 11390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 10540 - 10512
Alignment:
Q  103 ttgtaacgccctctttgaattatttaatt 131  Q
    |||||||||||||||||||||||||||||    
T  10540 ttgtaacgccctctttgaattatttaatt 10512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 50357 - 50414
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  50357 tgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 50414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 7133 - 7174
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtct 145  Q
    ||||||||||  || |||||||||||||||||||||||||||    
T  7133 tgtaacgcccgtttcgaattatttaattatttaattgagtct 7174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 71441 - 71384
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  71441 tgtaacgccctctctgaattatttaattatttaattgagtctagaagttattaagatg 71384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 176068 - 176024
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||  || ||||||||||||||||||||||||||||||    
T  176068 tgtaacgcccgtttcgaattatttaattatttaattgagtctaga 176024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 62891 - 62847
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| | ||| |||||||||||||||||||||||    
T  62891 tgtaacgcccacttttatttaattaattatttaattgagtctaga 62847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 10634 - 10691
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  10634 tgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 10691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 43197486 - 43197543
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  43197486 tgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 43197543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 14927565 - 14927623
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  14927565 ttgtaacgccctctttgaatgatttaattatttaattgaatctagaatttactaagatg 14927623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 8847649 - 8847604
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  8847649 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 8847604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 14039924 - 14039867
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| || |||||||    
T  14039924 tgtaacgccctctttgaattatttaattatttgattgagtctagaagctattaagatg 14039867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 15092151 - 15092091
Alignment:
Q  101 tattgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || ||| |||||||    
T  15092151 tattgtaatgccctctttgaattatttaattatttaattgagtctataatttattaagatg 15092091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 39705120 - 39705179
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||    
T  39705120 attgtaacgctctctttgaattatttaattatttaaatgagtctagaatttattaagatg 39705179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 7799916 - 7799871
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  7799916 tttgaattatttaattatttaattgagtctagaagttattaagatg 7799871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 12286971 - 12287028
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| ||| |||||||    
T  12286971 tgtaacaccctctttgaattatttaattatttagttgagtctagaatttattaagatg 12287028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 16597926 - 16597881
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  16597926 tgtaacgccctctttgaattatttaattatttaattgagtttagaa 16597881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 7090169 - 7090111
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||  || ||||||||||||||||||||||| ||||||||||||| |||||    
T  7090169 ttgtaacgcccgtttcgaattatttaattatttaattgattctagaagttacttagatg 7090111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 16238860 - 16238910
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||  || |||||||||||||||||||||||||||||||||||    
T  16238860 ttgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 16238910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 17239253 - 17239311
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||  || ||||||||||||||||||||||||||||||| ||| |||||||    
T  17239253 ttgtaacgcccgtttcgaattatttaattatttaattgagtctagaatttattaagatg 17239311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 155449 - 155405
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||    
T  155449 tgtaacgccctctttaaattatttaattatttaattgagtttaga 155405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 23844774 - 23844727
Alignment:
Q  101 tattgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||||||    
T  23844774 tattgtaacgcccacttttaattaattaattatttaattgagtctaga 23844727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 138
Target Start/End: Original strand, 15463750 - 15463784
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaat 138  Q
    |||||||||||||||||||||||||||||||||||    
T  15463750 tgtaacgccctctttgaattatttaattatttaat 15463784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 17054304 - 17054258
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||||  || ||||||||||||||||||||||||||||||    
T  17054304 attgtaacgcccatttcgaattatttaattatttaattgagtctaga 17054258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 153
Target Start/End: Complemental strand, 44054076 - 44054042
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||||||||||||||    
T  44054076 gaattatttaattatttaattgagtctagaagtta 44054042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 12904047 - 12903998
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || ||||||||||||||||||||||||| |||||||||    
T  12904047 tgtaacgcccgtttcgaattatttaattatttaattgagtttagaagtta 12903998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 16376355 - 16376396
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  16376355 aattatttaattatttaattgagtctagaacttattaagatg 16376396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 52242037 - 52242082
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||| |||||||||||| |||||| |||||||||||||||||||||    
T  52242037 tgtatcgccctctttgagttatttgattatttaattgagtctagaa 52242082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 3486348 - 3486316
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattattt 135  Q
    |||||||||||||||||||||||||||||||||    
T  3486348 ttgtaacgccctctttgaattatttaattattt 3486316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 14052053 - 14052097
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||  || ||||||||||||||||||||||||||||||    
T  14052053 tgtaacgcccgtttcgaattatttaattatttaattgagtctaga 14052097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 3838485 - 3838442
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||    
T  3838485 tttgatttatttaattatttaattgagtctagaaattattaaga 3838442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 15867485 - 15867528
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtcta 146  Q
    |||||||||||  || ||||||||||||||||||||||||||||    
T  15867485 ttgtaacgcccgtttcgaattatttaattatttaattgagtcta 15867528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 159
Target Start/End: Original strand, 23802087 - 23802126
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||||| ||| |||||    
T  23802087 aattatttaattatttaattgagtctagaatttattaaga 23802126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 149
Target Start/End: Complemental strand, 3097896 - 3097866
Alignment:
Q  119 gaattatttaattatttaattgagtctagaa 149  Q
    |||||||||||||||||||||||||||||||    
T  3097896 gaattatttaattatttaattgagtctagaa 3097866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 14872983 - 14873020
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  14872983 ttatttaattatttaattgagtctagaaattattaaga 14873020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 16355751 - 16355796
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| | ||| |||||||||||||||||||||||    
T  16355751 ttgtaacgcccacttttatttaattaattatttaattgagtctaga 16355796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 44616554 - 44616517
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  44616554 ttatttaattatttaattgagtctagaatttattaaga 44616517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 54797553 - 54797590
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  54797553 ttatttaattatttaattgagtctagaatttattaaga 54797590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 15535547 - 15535511
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaatt 139  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  15535547 ttgtaacgccctccttgaattatttgattatttaatt 15535511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 16347522 - 16347566
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| | ||| |||||||||||||||||||||||    
T  16347522 tgtaacgcccacttttatttaattaattatttaattgagtctaga 16347566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 46644135 - 46644092
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||||    
T  46644135 tgtaacgccctcttt-aattatttaattattttattgagtttaga 46644092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 23287153 - 23287104
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23287153 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 23287104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 24078152 - 24078208
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  24078152 ttgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaaga 24078208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 23061636 - 23061578
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  23061636 ttgtaacgcccgttttgaattatttaattatttaattgagtctagaagttattaagatg 23061578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 23653226 - 23653275
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23653226 tgtaacgccctctttgaattatttaattatttaattgagtatagaagtta 23653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 7680596 - 7680539
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||| ||| |||||||    
T  7680596 tgtaacgccctttttgaattatttaattatttatttgagtctagaatttattaagatg 7680539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 23077721 - 23077664
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||  |||||||||||||||||| ||||||||||||||||||| |||||||    
T  23077721 tgtaacgcccgttttgaattatttaattatataattgagtctagaagttattaagatg 23077664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 28291115 - 28291163
Alignment:
Q  101 tattgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  28291115 tattgtaacgcccgttttgaattatttaattatttaattgagtctagaa 28291163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 23705111 - 23705168
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||| ||| |||||||    
T  23705111 tgtaacgccctatttgaattatctaattatttagttgagtctagaatttattaagatg 23705168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 24688093 - 24688150
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||| |||||| |||||||||||||| ||||||||||||| ||| |||||||    
T  24688093 tgtaacgcccactttgatttatttaattattttattgagtctagaatttattaagatg 24688150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 161
Target Start/End: Original strand, 22133055 - 22133094
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  22133055 ttatttaattatttaattgagtctagaagttattaagatg 22133094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 36977 - 37019
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||| ||||||| |||||    
T  36977 gaattatttaattatttaattgagtctagtagttacttagatg 37019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 22730052 - 22730097
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||||||  || |||||||||||||||||||||||||||||||    
T  22730052 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaa 22730097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 22757522 - 22757567
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||    
T  22757522 ttgtaacgcccacttttaattaattaattatttaattgagtctaga 22757567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 23067415 - 23067460
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||||||  || |||||||||||||||||||||||||||||||    
T  23067415 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaa 23067460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 27754797 - 27754748
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || |||||||||||||||||||||||||||| ||||||    
T  27754797 tgtaacgcccgtttcgaattatttaattatttaattgagtctataagtta 27754748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 572665 - 572628
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  572665 ttatttaattatttaattgagtctagaatttattaaga 572628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 23661416 - 23661375
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||| ||||||||||||||||||||| ||| |||||||    
T  23661416 aattatttgattatttaattgagtctagaatttattaagatg 23661375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 24941959 - 24941922
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  24941959 ttatttaattatttaattgagtctagaatttattaaga 24941922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 25962519 - 25962564
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| ||||  |||| |||||||||||||||||||||||    
T  25962519 ttgtaacgcccactttttattaattaattatttaattgagtctaga 25962564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 43138651 - 43138618
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaa 149  Q
    ||||| ||||||||||||||||||||||||||||    
T  43138651 tttgatttatttaattatttaattgagtctagaa 43138618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 6484151 - 6484115
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaatt 139  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  6484151 ttgtaacgccctccttgaattatttgattatttaatt 6484115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 20518965 - 20519005
Alignment:
Q  121 attatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||| ||||||||||||| ||| |||||||    
T  20518965 attatttaattattttattgagtctagaatttattaagatg 20519005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 22737019 - 22737047
Alignment:
Q  125 tttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||||||||    
T  22737019 tttaattatttaattgagtctagaagtta 22737047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 11829 - 11773
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  11829 ttgtaacgccctctttgaattatttaattatttaattgagtctagaatttattaaga 11773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 14667 - 14723
Alignment:
Q  105 gtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  14667 gtaacgccctctttgaattatttaattatttaattgagtctagaatttattaagatg 14723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 179954 - 179909
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||    
T  179954 ttgtaacgcccacttttaattaattaattatttaattgagtctaga 179909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 16030 - 16080
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16030 ttgtaacgccctctttgaattatttaattattgaattgagtctagaagtta 16080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 12880 - 12925
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| ||||| ||| |||||||||||||||||||    
T  12880 ttgtaacgcccacttttaattaattagttatttaattgagtctaga 12925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 228780 - 228722
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  228780 ttgtaacgccctcttcgaattatttaattatttaattgagtctagaatttattaagatg 228722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 227848 - 227799
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||    
T  227848 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 227799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 1696 - 1753
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||    
T  1696 tgtaacgccctctttgaattatttaattatttaattgaatgtagaagttattaagatg 1753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 8088 - 8043
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  8088 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 8043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 705 - 656
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  705 tgtaacgccctcttggaattatttaattatttaattgagtctagaagtta 656  T

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Target: scaffold0324; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 16694 - 16649
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| ||||| ||| |||||||||||||||||||    
T  16694 ttgtaacgcccacttttaattaattagttatttaattgagtctaga 16649  T

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Target: scaffold0324; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 148
Target Start/End: Original strand, 3619 - 3647
Alignment:
Q  120 aattatttaattatttaattgagtctaga 148  Q
    |||||||||||||||||||||||||||||    
T  3619 aattatttaattatttaattgagtctaga 3647  T

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Target: scaffold0247 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 5644 - 5701
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  5644 tgtaacgcccggtttgaattatttaattatttaattgagtctagaagttattaagatg 5701  T

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Target: scaffold0247; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 16928 - 16965
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  16928 ttatttaattatttaattgagtctagaatttattaaga 16965  T

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Target: scaffold0211 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 27784 - 27829
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  27784 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 27829  T

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Target: scaffold0122 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 32313 - 32362
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32313 tgtaaggccctctttgaattatttaattatttaattgagtctagaagtta 32362  T

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Target: scaffold0122; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 24882 - 24937
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||    
T  24882 tgtaacgccctccttgaattatttaattatttaattgagtctagaatttattaaga 24937  T

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Target: scaffold0084 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 11460 - 11403
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  11460 tgtaacgccctctttgaaatatttaattatttaattgagtctagaatttattaagatg 11403  T

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Target: scaffold0084; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 4958 - 4900
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  4958 ttgtaacgccttctttgcattatttaattatttaattgagtctagaatttattaagatg 4900  T

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Target: scaffold0555 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 9386 - 9445
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatggg 163  Q
    |||||||  ||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  9386 tgtaacgttctctttgaattatttaattatttaattgagtctagaatttattaagatggg 9445  T

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Target: scaffold0555; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 1883 - 1839
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||    
T  1883 tgtaacgcccacttttaattaattaattatttaattgagtctaga 1839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 7057 - 7112
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||| |||||    
T  7057 tgtaacgccctctttgaattatttaattatttaattgagtctataatttattaaga 7112  T

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Target: scaffold0145 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 8556 - 8501
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||    
T  8556 tgtaacgccctctttgaattatttaattgtttaattgagtctagaatttattaaga 8501  T

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Target: scaffold0346 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 16549 - 16595
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  16549 ttgtaacgcgctctttgaattatttaattatttaattgagtctagaa 16595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 15230 - 15184
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  15230 ttgtaatgccctctttgaattatttaattatttaattgagtctagaa 15184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 5785 - 5727
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| || | |||||||    
T  5785 ttgtaacgccttctttgaattatttaattatttaattgagtctagaggtcattaagatg 5727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 13367 - 13309
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| || | |||||||    
T  13367 ttgtaacgccttctttgaattatttaattatttaattgagtctagaggtcattaagatg 13309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 23319 - 23261
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| || | |||||||    
T  23319 ttgtaacgccttctttgaattatttaattatttaattgagtctagaggtcattaagatg 23261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 30648 - 30598
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  30648 ttgtaacgcccgttttgaattatttaattatttaattgagtctagaagtta 30598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 10668 - 10610
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||    
T  10668 ttgtaacgcccgtttcgaattatttaattatttaattgagtctagaagttattaagatg 10610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 17371 - 17330
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  17371 aattatttaattatttaattgagtctagaagttattaagatg 17330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 5833 - 5791
Alignment:
Q  106 taacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5833 taacgccctctttgaattatttaattatttaattgagtctaga 5791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 1197 - 1140
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||    
T  1197 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaagttattaagatg 1140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 3214 - 3169
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  3214 tgtaacgccctcttttaattatttaattatttaattgagtctagaa 3169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 16491 - 16548
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||    
T  16491 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaagttattaagatg 16548  T

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Target: scaffold0028 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 687 - 642
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  687 tttgaattatttaattatttaattgagtctagaagttattaagatg 642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 135476 - 135439
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  135476 ttatttaattatttaattgagtctagaatttattaaga 135439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 137945 - 137908
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  137945 ttatttaattatttaattgagtctagaatttattaaga 137908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 140414 - 140377
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  140414 ttatttaattatttaattgagtctagaatttattaaga 140377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 142883 - 142846
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  142883 ttatttaattatttaattgagtctagaatttattaaga 142846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 26038 - 26085
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  26038 attgtaatgccctctttgaattatttaattaattaattgagtctagaa 26085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 24396 - 24443
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  24396 attgtaacgccttcttttaattatttaattatttaattgagtctagaa 24443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 149
Target Start/End: Original strand, 159971 - 160004
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaa 149  Q
    ||||| ||||||||||||||||||||||||||||    
T  159971 tttgatttatttaattatttaattgagtctagaa 160004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1401 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1401
Description:

Target: scaffold1401; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 1287 - 1337
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||  || |||||||||||||||||||||||||||||||||||    
T  1287 ttgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 1337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 551 - 609
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||| ||| |||||||    
T  551 ttgtaacgcccactttgaattatttaattattttattaagtctagaatttattaagatg 609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 9080 - 9022
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||| |||||| |||||||||||||||||||| || ||| |||||||    
T  9080 ttgtaacgccctcttttaattatgtaattatttaattgagtctaaaatttattaagatg 9022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 9517 - 9479
Alignment:
Q  101 tattgtaacgccctctttgaattatttaattatttaatt 139  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9517 tattgtaacgccctctttgaattatttaattatttaatt 9479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 22168 - 22118
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||  || |||||||||||||||||||||||||||||||||||    
T  22168 ttgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 22118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 31483 - 31525
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  31483 gaattatttaattatttaattgagtctagaagttattaagatg 31525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 53418 - 53463
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    ||||||||||  || |||||||||||||||||||||||||||||||    
T  53418 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaa 53463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2044 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold2044
Description:

Target: scaffold2044; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 273 - 322
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||    
T  273 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 3525 - 3582
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||||||| |||| || |||||||||||||||||||||| ||| |||||||    
T  3525 tgtaacgccctcttttaattcttaaattatttaattgagtctagaatttattaagatg 3582  T

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Target: scaffold0427 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 14738 - 14681
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||  || ||||||||||||||||||||||||||||| ||||||| |||||    
T  14738 tgtaacgcccgtttcgaattatttaattatttaattgagtctagtagttacttagatg 14681  T

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Target: scaffold0395 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 14614 - 14663
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||    
T  14614 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 14663  T

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Target: scaffold0231 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 11707 - 11670
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaatt 139  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11707 attgtaacgccctctttgaattatttaattatttaatt 11670  T

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Target: scaffold0080 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 45211 - 45170
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  45211 aattatttaattatttaattgagtctagaagttattaagatg 45170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 29046 - 29095
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||    
T  29046 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 29095  T

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Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 53216 - 53167
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||    
T  53216 tgtaacgcccgtttcgaattatttaattatttaattgagtctagaagtta 53167  T

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Target: scaffold0207 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 1460 - 1496
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaatt 139  Q
    |||||||||||||||||||||||||||||||||||||    
T  1460 ttgtaacgccctctttgaattatttaattatttaatt 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 1485 - 1514
Alignment:
Q  120 aattatttaattatttaattgagtctagaa 149  Q
    ||||||||||||||||||||||||||||||    
T  1485 aattatttaattatttaattgagtctagaa 1514  T

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Target: scaffold0637 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 3283 - 3248
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaatt 139  Q
    ||||||||||||||||||||||||||||||||||||    
T  3283 tgtaacgccctctttgaattatttaattatttaatt 3248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 3259 - 3218
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  3259 aattatttaattatttaattgagtctagaatttattaagatg 3218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 153
Target Start/End: Complemental strand, 397 - 363
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||||||||||||||    
T  397 gaattatttaattatttaattgagtctagaagtta 363  T

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Target: scaffold0389 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 12487 - 12521
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||||||||||||||    
T  12487 gaattatttaattatttaattgagtctagaagtta 12521  T

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Target: scaffold0309 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 149
Target Start/End: Complemental strand, 7873 - 7835
Alignment:
Q  111 ccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  7873 ccctcttttaattatttaattatttaattgagtctagaa 7835  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 35246 - 35188
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||  ||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  35246 ttgtaacgcccattttaaattatttaattatttaattgagtcttgaatttattaagatg 35188  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 153
Target Start/End: Complemental strand, 3141 - 3107
Alignment:
Q  119 gaattatttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||||||||||||||    
T  3141 gaattatttaattatttaattgagtctagaagtta 3107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 134
Target Start/End: Complemental strand, 199598 - 199568
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatt 134  Q
    |||||||||||||||||||||||||||||||    
T  199598 tgtaacgccctctttgaattatttaattatt 199568  T

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Target: scaffold1800 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 294 - 253
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  294 aattatttaattatttaattgagtctagaatttattaagatg 253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 318 - 283
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaatt 139  Q
    ||||||||||||||||||||||| ||||||||||||    
T  318 tgtaacgccctctttgaattattcaattatttaatt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 1130 - 1171
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||| |||||||||||||||||||||||||| |||||||    
T  1130 aattattcaattatttaattgagtctagaagttattaagatg 1171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 12926 - 12881
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||    
T  12926 tttgatttatttaattatttaattgagtctagaatttattaagatg 12881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 11955 - 12012
Alignment:
Q  102 attgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||   ||||| |||||||||||||||||||||||||||| ||| |||||    
T  11955 attgtaacgcctgttttgatttatttaattatttaattgagtctagaaattattaaga 12012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 14675 - 14716
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||| |||||||||||||||||||||||||| |||||||    
T  14675 aattattcaattatttaattgagtctagaagttattaagatg 14716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 7349 - 7398
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||  || ||||||||||||||||||||| |||||||||||||    
T  7349 tgtaacgcccgtttcgaattatttaattatttaattaagtctagaagtta 7398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 68455 - 68496
Alignment:
Q  120 aattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||| |||||||||||||||||||||| |||||||    
T  68455 aattatttaatcatttaattgagtctagaagttattaagatg 68496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000004; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 64600 - 64645
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||    
T  64600 ttgtaacgcccacttttaattaattaattatttaattgagtctaga 64645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 55905 - 55942
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  55905 ttatttaattatttaattgagtctagaatttattaaga 55942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 19282 - 19325
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||||    
T  19282 tgtaacgccctcttt-aattatttaattattttattgagtttaga 19325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 51879 - 51923
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||| ||||||    
T  51879 tgtaacgcccacttttaattaattaattatttaattgattctaga 51923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 17644 - 17600
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||  || ||||||||||||||||||||||||||||||    
T  17644 tgtaacgcccgtttcgaattatttaattatttaattgagtctaga 17600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 16112 - 16156
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||    
T  16112 tgtaacgcccacttttaattaattaattatttaattgagtctaga 16156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 35200 - 35244
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||    
T  35200 tgtaacgcccacttttaattaattaattatttaattgagtctaga 35244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 25834 - 25778
Alignment:
Q  104 tgtaacgccctctttgaattattt-aattatttaattgagtctagaagttactaaga 159  Q
    ||||||||||||||||||||||||   |||||||||||||||||||| ||| |||||    
T  25834 tgtaacgccctctttgaattatttgttttatttaattgagtctagaatttattaaga 25778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 40358 - 40403
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| ||||| ||| |||||||||||||||||||    
T  40358 ttgtaacgcccacttttaattaattagttatttaattgagtctaga 40403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 33686 - 33730
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| ||| |||||||||||||||||||    
T  33686 tgtaacgcccacttttaattaattagttatttaattgagtctaga 33730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 131221 - 131185
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaatt 139  Q
    |||||||||||| ||||||||||||||||||||||||    
T  131221 ttgtaacgccctttttgaattatttaattatttaatt 131185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 71107 - 71063
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||    
T  71107 tgtaacgcccacttttaattaattaattatttaattgagtctaga 71063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 161849 - 161813
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaatt 139  Q
    ||||||||||||| |||||||||||||||||||||||    
T  161849 ttgtaacgccctccttgaattatttaattatttaatt 161813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 161824 - 161795
Alignment:
Q  120 aattatttaattatttaattgagtctagaa 149  Q
    ||||||||||||||||||||||||||||||    
T  161824 aattatttaattatttaattgagtctagaa 161795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 16898 - 16855
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||    
T  16898 tttgatttatttaattatttaattgagtctagaatttattaaga 16855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 135
Target Start/End: Complemental strand, 31188 - 31157
Alignment:
Q  104 tgtaacgccctctttgaattatttaattattt 135  Q
    ||||||||||||||||||||||||||||||||    
T  31188 tgtaacgccctctttgaattatttaattattt 31157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 20557 - 20522
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaatt 139  Q
    |||||||||||||||||||||||||||||| |||||    
T  20557 tgtaacgccctctttgaattatttaattatctaatt 20522  T

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Target: scaffold0102; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 47290 - 47334
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||  || ||||||||||||||||||||| ||||||||    
T  47290 tgtaacgcccgtttagaattatttaattatttaattaagtctaga 47334  T

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Target: scaffold0101 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 166 - 209
Alignment:
Q  116 tttgaattatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||    
T  166 tttgatttatttaattatttaattgagtctagaaattattaaga 209  T

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Target: scaffold0101; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 7772 - 7817
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| ||||| ||||||||||||| |||||||||    
T  7772 ttgtaacgcccacttttaattaattaattatttaatcgagtctaga 7817  T

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Target: scaffold0358 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 149
Target Start/End: Complemental strand, 5994 - 5964
Alignment:
Q  119 gaattatttaattatttaattgagtctagaa 149  Q
    |||||||||||||||||||||||||||||||    
T  5994 gaattatttaattatttaattgagtctagaa 5964  T

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Target: scaffold0357 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 14974 - 15032
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||| ||| |||||| |||||||||||||| ||||||||||||  ||| |||||||    
T  14974 ttgtaacacccactttgatttatttaattattttattgagtctagagtttattaagatg 15032  T

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Target: scaffold0165 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 26490 - 26548
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaagttactaagatg 161  Q
    ||||||||||| |||| | |||||||||||||| ||||||||||||  ||| |||||||    
T  26490 ttgtaacgcccactttaatttatttaattattttattgagtctagagtttattaagatg 26548  T

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Target: scaffold0114 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 14290 - 14336
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctagaa 149  Q
    |||||||||||  || ||||||||||||||| |||||||||||||||    
T  14290 ttgtaacgcccatttcgaattatttaattatctaattgagtctagaa 14336  T

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Target: scaffold0114; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 39137 - 39174
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  39137 ttatttaattatttaattgagtctagaatttattaaga 39174  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Complemental strand, 30058 - 30016
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtcta 146  Q
    ||||||||||  || ||||||||||||||||||||||||||||    
T  30058 tgtaacgcccgtttcgaattatttaattatttaattgagtcta 30016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 529 - 496
Alignment:
Q  120 aattatttaattatttaattgagtctagaagtta 153  Q
    ||||||||||||||| ||||||||||||||||||    
T  529 aattatttaattattgaattgagtctagaagtta 496  T

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Target: scaffold0970 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 1848 - 1804
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||    
T  1848 ttgtaacgccctcttt-aattatttaattattttattgagtttaga 1804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 7525 - 7480
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| ||||| | |||||||||||||||||||||    
T  7525 ttgtaacgcccacttttaattaatcaattatttaattgagtctaga 7480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 19559 - 19518
Alignment:
Q  103 ttgtaacgccctctttgaattattt-aattatttaattgagt 143  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  19559 ttgtaacgccctctttgaattatttgatttatttaattgagt 19518  T

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Target: scaffold0241 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 10236 - 10281
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| ||||| ||| |||||||||||||||||||    
T  10236 ttgtaacgcccacttttaattaattagttatttaattgagtctaga 10281  T

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Target: scaffold0161 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 35914 - 35873
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtc 144  Q
    |||||||||||  || ||||||||||||||||||||||||||    
T  35914 ttgtaacgcccatttcgaattatttaattatttaattgagtc 35873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 13776 - 13731
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||||  || | ||||||||||||||||||||||||||||    
T  13776 ttgtaacgcccgtttcggattatttaattatttaattgagtctaga 13731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 148
Target Start/End: Complemental strand, 16934 - 16906
Alignment:
Q  120 aattatttaattatttaattgagtctaga 148  Q
    |||||||||||||||||||||||||||||    
T  16934 aattatttaattatttaattgagtctaga 16906  T

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Target: scaffold0043 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 19554 - 19509
Alignment:
Q  103 ttgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||| |||| ||||| ||| |||||||||||||||||||    
T  19554 ttgtaacgcccacttttaattaattagttatttaattgagtctaga 19509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 68760 - 68723
Alignment:
Q  122 ttatttaattatttaattgagtctagaagttactaaga 159  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  68760 ttatttaattatttaattgagtctagaatttattaaga 68723  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 52856 - 52827
Alignment:
Q  120 aattatttaattatttaattgagtctagaa 149  Q
    ||||||||||||||||||||||||||||||    
T  52856 aattatttaattatttaattgagtctagaa 52827  T

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Target: scaffold1052 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 1841 - 1813
Alignment:
Q  125 tttaattatttaattgagtctagaagtta 153  Q
    |||||||||||||||||||||||||||||    
T  1841 tttaattatttaattgagtctagaagtta 1813  T

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Target: scaffold0810 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 5139 - 5096
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||||    
T  5139 tgtaacgccctcttt-aattatttaattattttattgagtttaga 5096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 6692 - 6648
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    ||||||||||  || ||||||||||||||||||||| ||||||||    
T  6692 tgtaacgcccgtttcgaattatttaattatttaattaagtctaga 6648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 544 - 500
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| ||||| | |||||||||||||||||||||    
T  544 tgtaacgcccacttttaattaataaattatttaattgagtctaga 500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 148
Target Start/End: Complemental strand, 6127 - 6099
Alignment:
Q  120 aattatttaattatttaattgagtctaga 148  Q
    |||||||||||||||||||||||||||||    
T  6127 aattatttaattatttaattgagtctaga 6099  T

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Target: scaffold0289 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 3320 - 3276
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| ||||  |||| |||||||||||||||||||||||    
T  3320 tgtaacgcccactttttattaattaattatttaattgagtctaga 3276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 22036 - 22072
Alignment:
Q  123 tatttaattatttaattgagtctagaagttactaaga 159  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  22036 tatttaattatttaattgagtctagaatttattaaga 22072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 3759 - 3803
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| |||||||  ||||||||||||||||||||    
T  3759 tgtaacgcccacttttaattattcgattatttaattgagtctaga 3803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 8994 - 9050
Alignment:
Q  104 tgtaacgccctctttgaattatttaatt-atttaattgagtctagaagttactaaga 159  Q
    ||||| ||||||||||||||||||  || |||||||||||||||||| ||| |||||    
T  8994 tgtaatgccctctttgaattatttgttttatttaattgagtctagaatttattaaga 9050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 13928 - 13984
Alignment:
Q  104 tgtaacgccctctttgaattatttaatt-atttaattgagtctagaagttactaaga 159  Q
    ||||| ||||||||||||||||||  || |||||||||||||||||| ||| |||||    
T  13928 tgtaatgccctctttgaattatttgttttatttaattgagtctagaatttattaaga 13984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 5011 - 4967
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| | ||| |||||||||||||||||||||||    
T  5011 tgtaacgcccacttttatttaattaattatttaattgagtctaga 4967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 9442 - 9398
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| | ||| |||||||||||||||||||||||    
T  9442 tgtaacgcccacttttatttaattaattatttaattgagtctaga 9398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 148
Target Start/End: Original strand, 25016 - 25044
Alignment:
Q  120 aattatttaattatttaattgagtctaga 148  Q
    |||||||||||||||||||||||||||||    
T  25016 aattatttaattatttaattgagtctaga 25044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 148
Target Start/End: Complemental strand, 33341 - 33313
Alignment:
Q  120 aattatttaattatttaattgagtctaga 148  Q
    |||||||||||||||||||||||||||||    
T  33341 aattatttaattatttaattgagtctaga 33313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 45339 - 45295
Alignment:
Q  104 tgtaacgccctctttgaattatttaattatttaattgagtctaga 148  Q
    |||||||||| |||| | ||| |||||||||||||||||||||||    
T  45339 tgtaacgcccacttttatttaattaattatttaattgagtctaga 45295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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