View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0892_low_13 (Length: 206)

Name: NF0892_low_13
Description: NF0892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0892_low_13
NF0892_low_13
[»] chr3 (41 HSPs)
chr3 (109-191)||(48633874-48633956)
chr3 (110-189)||(40508958-40509037)
chr3 (106-191)||(23774146-23774231)
chr3 (109-191)||(33113225-33113307)
chr3 (112-191)||(18430316-18430395)
chr3 (111-191)||(24382938-24383018)
chr3 (112-191)||(31887497-31887576)
chr3 (112-185)||(45897050-45897123)
chr3 (112-191)||(45257265-45257344)
chr3 (112-191)||(51454295-51454374)
chr3 (120-185)||(18428757-18428822)
chr3 (110-191)||(39641884-39641965)
chr3 (109-185)||(1847663-1847739)
chr3 (110-185)||(2977380-2977455)
chr3 (112-191)||(23888817-23888896)
chr3 (110-185)||(33111839-33111914)
chr3 (125-191)||(31885531-31885597)
chr3 (112-185)||(23887198-23887271)
chr3 (112-185)||(41021054-41021127)
chr3 (112-185)||(48635391-48635464)
chr3 (126-185)||(24381758-24381817)
chr3 (114-185)||(33852721-33852792)
chr3 (109-191)||(45898393-45898475)
chr3 (112-185)||(33850982-33851055)
chr3 (112-185)||(40508493-40508566)
chr3 (112-180)||(40998515-40998583)
chr3 (112-185)||(2975460-2975533)
chr3 (115-182)||(45255486-45255553)
chr3 (122-191)||(3150262-3150331)
chr3 (122-183)||(54898447-54898508)
chr3 (122-183)||(2226225-2226286)
chr3 (122-183)||(30599991-30600052)
chr3 (122-191)||(38193520-38193589)
chr3 (112-185)||(41944576-41944649)
chr3 (122-191)||(41979362-41979431)
chr3 (122-191)||(46308817-46308886)
chr3 (122-191)||(46310446-46310515)
chr3 (122-191)||(53094283-53094352)
chr3 (122-191)||(53187752-53187821)
chr3 (122-183)||(53190832-53190893)
chr3 (153-185)||(37865425-37865457)
[»] chr5 (23 HSPs)
chr5 (111-191)||(38596867-38596947)
chr5 (112-191)||(43318105-43318184)
chr5 (111-191)||(38178138-38178218)
chr5 (111-191)||(38205362-38205442)
chr5 (109-191)||(32087511-32087593)
chr5 (109-185)||(32089943-32090019)
chr5 (112-185)||(32835876-32835949)
chr5 (112-185)||(42619289-42619362)
chr5 (112-191)||(18728647-18728726)
chr5 (112-191)||(35292427-35292505)
chr5 (110-185)||(40330533-40330608)
chr5 (112-189)||(33256400-33256477)
chr5 (112-191)||(35395333-35395412)
chr5 (109-191)||(18726562-18726644)
chr5 (120-185)||(33257778-33257843)
chr5 (127-185)||(38176647-38176705)
chr5 (127-185)||(38203871-38203929)
chr5 (122-191)||(2852896-2852965)
chr5 (122-183)||(30463910-30463971)
chr5 (130-185)||(24496761-24496816)
chr5 (122-180)||(28822111-28822169)
chr5 (122-183)||(17574328-17574389)
chr5 (122-183)||(36057666-36057727)
[»] chr8 (39 HSPs)
chr8 (110-191)||(42897819-42897900)
chr8 (111-191)||(37526068-37526148)
chr8 (111-191)||(31821417-31821497)
chr8 (112-191)||(462415-462494)
chr8 (112-191)||(33160193-33160272)
chr8 (111-185)||(40019155-40019229)
chr8 (112-191)||(1320617-1320696)
chr8 (111-185)||(38882848-38882922)
chr8 (112-185)||(31201194-31201267)
chr8 (112-184)||(8654500-8654572)
chr8 (111-191)||(32822360-32822440)
chr8 (110-185)||(31823494-31823569)
chr8 (127-185)||(37524873-37524931)
chr8 (112-189)||(25707315-25707392)
chr8 (112-185)||(33368759-33368832)
chr8 (112-185)||(33748332-33748405)
chr8 (120-181)||(461184-461245)
chr8 (112-189)||(25373636-25373713)
chr8 (113-185)||(38881429-38881501)
chr8 (110-185)||(32824289-32824364)
chr8 (111-185)||(31199484-31199558)
chr8 (120-185)||(42894784-42894849)
chr8 (110-185)||(24526894-24526969)
chr8 (149-191)||(33750429-33750471)
chr8 (111-191)||(9184382-9184462)
chr8 (135-185)||(8656005-8656053)
chr8 (131-182)||(10267857-10267908)
chr8 (118-185)||(28433767-28433834)
chr8 (115-185)||(33158659-33158729)
chr8 (122-183)||(13282488-13282549)
chr8 (122-191)||(27691164-27691233)
chr8 (122-191)||(29237161-29237230)
chr8 (122-191)||(33707216-33707285)
chr8 (122-183)||(34681084-34681145)
chr8 (122-191)||(35509224-35509293)
chr8 (112-185)||(40020686-40020759)
chr8 (122-183)||(42943444-42943505)
chr8 (111-191)||(9186657-9186737)
chr8 (121-181)||(25705308-25705368)
[»] chr7 (38 HSPs)
chr7 (110-191)||(47341731-47341812)
chr7 (111-191)||(33038842-33038922)
chr7 (112-191)||(23953805-23953884)
chr7 (112-191)||(38613526-38613605)
chr7 (112-185)||(45465202-45465275)
chr7 (111-191)||(46996747-46996827)
chr7 (112-191)||(2167479-2167558)
chr7 (112-191)||(38614804-38614883)
chr7 (112-191)||(38614956-38615035)
chr7 (112-189)||(2492327-2492404)
chr7 (112-185)||(30108565-30108638)
chr7 (112-191)||(40784346-40784425)
chr7 (112-191)||(46812627-46812706)
chr7 (112-185)||(33775408-33775481)
chr7 (110-185)||(4321036-4321111)
chr7 (106-185)||(46994654-46994733)
chr7 (111-185)||(8421415-8421489)
chr7 (112-185)||(8423332-8423405)
chr7 (112-189)||(27955370-27955447)
chr7 (112-185)||(35342425-35342498)
chr7 (112-185)||(35344341-35344414)
chr7 (112-185)||(40785566-40785639)
chr7 (113-185)||(3690151-3690223)
chr7 (114-185)||(46810707-46810778)
chr7 (53-111)||(21751004-21751062)
chr7 (120-185)||(33037701-33037766)
chr7 (120-185)||(36762698-36762763)
chr7 (109-185)||(45463667-45463743)
chr7 (120-185)||(47339784-47339849)
chr7 (113-185)||(36756901-36756973)
chr7 (113-185)||(36766425-36766497)
chr7 (112-191)||(2168846-2168925)
chr7 (110-185)||(23955303-23955378)
chr7 (122-183)||(39857655-39857716)
chr7 (113-185)||(30109717-30109789)
chr7 (122-191)||(27666110-27666179)
chr7 (122-191)||(35403629-35403698)
chr7 (122-183)||(38474196-38474257)
[»] chr1 (35 HSPs)
chr1 (112-191)||(42134482-42134561)
chr1 (112-185)||(33685299-33685372)
chr1 (112-191)||(18183988-18184067)
chr1 (111-191)||(36895555-36895635)
chr1 (112-191)||(44157433-44157512)
chr1 (109-191)||(46638852-46638934)
chr1 (112-185)||(5784885-5784958)
chr1 (112-189)||(35480022-35480099)
chr1 (111-185)||(11152544-11152618)
chr1 (112-185)||(27940608-27940681)
chr1 (112-185)||(33679259-33679332)
chr1 (112-191)||(31801633-31801712)
chr1 (128-191)||(45381029-45381092)
chr1 (110-185)||(47269507-47269582)
chr1 (111-185)||(31803718-31803792)
chr1 (112-185)||(45379085-45379158)
chr1 (120-185)||(27952518-27952583)
chr1 (112-185)||(35478087-35478160)
chr1 (111-185)||(47264123-47264197)
chr1 (120-180)||(36894830-36894890)
chr1 (113-185)||(46636766-46636838)
chr1 (111-185)||(18180499-18180573)
chr1 (122-183)||(2869589-2869650)
chr1 (112-185)||(5783364-5783437)
chr1 (122-191)||(26223597-26223666)
chr1 (112-185)||(42136262-42136335)
chr1 (113-185)||(6577123-6577195)
chr1 (122-181)||(25278423-25278482)
chr1 (122-181)||(37344352-37344411)
chr1 (123-185)||(33599229-33599291)
chr1 (122-191)||(4856011-4856080)
chr1 (122-183)||(31236829-31236890)
chr1 (122-191)||(33602689-33602758)
chr1 (122-191)||(34778183-34778252)
chr1 (122-191)||(46583601-46583670)
[»] chr2 (29 HSPs)
chr2 (113-191)||(25619661-25619739)
chr2 (112-191)||(15432328-15432407)
chr2 (112-191)||(37417273-37417352)
chr2 (112-185)||(42880829-42880902)
chr2 (116-191)||(42879360-42879434)
chr2 (111-185)||(41160-41234)
chr2 (111-185)||(28248193-28248267)
chr2 (116-185)||(39560-39629)
chr2 (112-185)||(41706539-41706612)
chr2 (111-185)||(42001609-42001683)
chr2 (112-185)||(11021533-11021606)
chr2 (112-191)||(29909705-29909784)
chr2 (111-185)||(15372498-15372572)
chr2 (112-191)||(92392-92470)
chr2 (112-185)||(37418787-37418860)
chr2 (112-185)||(41708448-41708521)
chr2 (112-191)||(39442-39521)
chr2 (110-185)||(15373906-15373981)
chr2 (111-185)||(42003508-42003582)
chr2 (122-183)||(16763086-16763147)
chr2 (112-185)||(28246663-28246736)
chr2 (112-191)||(361445-361524)
chr2 (113-169)||(25620611-25620667)
chr2 (124-183)||(19906694-19906753)
chr2 (122-183)||(2766944-2767005)
chr2 (116-185)||(11023064-11023132)
chr2 (122-191)||(16764621-16764690)
chr2 (120-165)||(20942029-20942074)
chr2 (124-181)||(39663166-39663223)
[»] chr4 (39 HSPs)
chr4 (111-191)||(44558538-44558618)
chr4 (112-185)||(43778389-43778462)
chr4 (110-191)||(51041975-51042056)
chr4 (111-185)||(39085170-39085244)
chr4 (109-190)||(4519373-4519454)
chr4 (112-185)||(47941811-47941884)
chr4 (110-185)||(44992806-44992881)
chr4 (111-185)||(10372757-10372831)
chr4 (111-185)||(42879274-42879348)
chr4 (112-185)||(39923025-39923098)
chr4 (112-191)||(4520463-4520542)
chr4 (111-185)||(10762580-10762654)
chr4 (112-185)||(44794811-44794884)
chr4 (112-191)||(27624806-27624885)
chr4 (121-191)||(44556629-44556699)
chr4 (112-185)||(2350558-2350631)
chr4 (112-185)||(2828429-2828502)
chr4 (112-185)||(47942764-47942837)
chr4 (109-185)||(44792931-44793007)
chr4 (112-185)||(10371057-10371130)
chr4 (112-185)||(35996063-35996136)
chr4 (111-185)||(39083638-39083712)
chr4 (112-191)||(2827407-2827483)
chr4 (112-185)||(5484540-5484613)
chr4 (112-185)||(5486070-5486143)
chr4 (112-180)||(10767973-10768041)
chr4 (112-191)||(230436-230515)
chr4 (134-185)||(51040757-51040808)
chr4 (111-185)||(39921493-39921567)
chr4 (122-191)||(319283-319352)
chr4 (113-185)||(39189383-39189455)
chr4 (107-185)||(42880806-42880884)
chr4 (122-191)||(4173750-4173819)
chr4 (122-191)||(33264392-33264461)
chr4 (122-191)||(43507177-43507246)
chr4 (122-191)||(43508663-43508732)
chr4 (122-191)||(43519434-43519503)
chr4 (112-185)||(43779918-43779991)
chr4 (153-185)||(39190837-39190869)
[»] chr6 (16 HSPs)
chr6 (112-185)||(17950561-17950634)
chr6 (112-185)||(4641355-4641428)
chr6 (112-185)||(29077328-29077401)
chr6 (112-185)||(4646234-4646307)
chr6 (112-185)||(30639611-30639684)
chr6 (127-191)||(3018477-3018541)
chr6 (110-185)||(35174389-35174464)
chr6 (112-185)||(2968139-2968212)
chr6 (112-185)||(29112300-29112373)
chr6 (110-185)||(29114794-29114869)
chr6 (112-171)||(3018528-3018587)
chr6 (124-191)||(13613627-13613694)
chr6 (111-185)||(17952093-17952167)
chr6 (113-182)||(31210461-31210530)
chr6 (112-163)||(35175936-35175987)
chr6 (113-191)||(21134978-21135056)
[»] scaffold0477 (1 HSPs)
scaffold0477 (112-185)||(6685-6758)
[»] scaffold1041 (1 HSPs)
scaffold1041 (135-189)||(2121-2175)
[»] scaffold0182 (1 HSPs)
scaffold0182 (61-111)||(17183-17233)


Alignment Details
Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 48633874 - 48633956
Alignment:
Q  109 attgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  48633874 attgagtgaaccatcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagt 48633956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 40509037 - 40508958
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaactta 189  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  40509037 ttgagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaactta 40508958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 23774146 - 23774231
Alignment:
Q  106 aagattgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||| |||||    
T  23774146 aagattgagtgaaccatcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagt 23774231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 33113307 - 33113225
Alignment:
Q  109 attgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  33113307 attgagtgaaccatcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagt 33113225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 18430395 - 18430316
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||||||||||||| ||||||| | ||||||| ||||||||||||||||||||||||||||||    
T  18430395 gagtgaaccatcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagt 18430316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 24383018 - 24382938
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||||    
T  24383018 tgagtgaaccatcaaattggtccttgaatttttacgggtcggccaaattcatccttcaattatgagaaatatcaacttagt 24382938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 31887576 - 31887497
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||  || ||||||||||||||||||||||||||    
T  31887576 gagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagt 31887497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 45897050 - 45897123
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  45897050 gagtgaatcatcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaa 45897123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 45257344 - 45257265
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||||||  |||||||||||||||    
T  45257344 gagtgaaccatcaaattcgttcttgaattttcacgggtcggccaaattcatccctcaattatgtaaaatatcaacttagt 45257265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 51454374 - 51454295
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||||||||||||| |||| |||| ||||||| | |||||||||||||||||||||| |||||    
T  51454374 gagtgaaccatcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattatgcgaaatatcaaattagt 51454295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 18428757 - 18428822
Alignment:
Q  120 catcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18428757 catcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaa 18428822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 39641965 - 39641884
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||| || ||||||||| | || ||||||||||||    
T  39641965 ttgagtgaaccatcaaatttgtccttgaatttttacgggtcggccaaattcatctctcaattattcaaagtatcaacttagt 39641884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 1847739 - 1847663
Alignment:
Q  109 attgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||    
T  1847739 attgagtgaatcatcaaatttgtccttgaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaa 1847663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 2977455 - 2977380
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||| |||||||||||||||||||||||||||  |||| ||||||| ||||| ||||||||||||||||||    
T  2977455 ttgagtgaatcatcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaa 2977380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 23888896 - 23888817
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||||||| |||||||| ||  ||||| ||| ||||||||||||||||||||||||||| ||||||    
T  23888896 gagtgaaccatcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagt 23888817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 33111839 - 33111914
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||| |||||| ||||||| |||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  33111839 ttgagtgaatcatcaacttcgtccctgaattttcacggctcggtcaaattcatccctcaattatgcgaaatatcaa 33111914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 191
Target Start/End: Original strand, 31885531 - 31885597
Alignment:
Q  125 aattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| |||||    
T  31885531 aattcgtccttggatttttacgggtcggtcaaattcatcccttaattatgcgaaatatcaatttagt 31885597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 23887198 - 23887271
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| |||||||||||||||||| |||||||  || ||||||||||||||||||||||||||||    
T  23887198 gagtgaatcatcaacttcgtccttgaatttttatgggtcggctaacttcgtccctcaattatgcgaaatatcaa 23887271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 41021127 - 41021054
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||||||||||| |||||||| ||| ||||| |||||| |||||||||||||||||||| ||||    
T  41021127 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaa 41021054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 48635464 - 48635391
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||||| |||||||| |||| |||||||||||||||||| ||||||||||||||||||    
T  48635464 gagtgaatcatcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaa 48635391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 24381758 - 24381817
Alignment:
Q  126 attcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  24381758 attcgtccttgaatttttacggatcggccaaattcatccctcaattatgcgaaatatcaa 24381817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 33852792 - 33852721
Alignment:
Q  114 gtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||| ||| ||||| |||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  33852792 gtgaatcattaaatttgtccttgaatttttacgggttggtcaaatttatccctcaattatgcgaaatatcaa 33852721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 45898475 - 45898393
Alignment:
Q  109 attgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||||||| |||||||| ||  ||||  ||| || |||||| ||||||||||||||||||||||||    
T  45898475 attgagtgaaccatcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagt 45898393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 33850982 - 33851055
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||| | |||||||| ||||||||||||| |||||||||||||||| |||||||||||    
T  33850982 gagtgaatcatcaatttcgttcctgaattttcacgggtcggtcaacttcgtccctcaattatccgaaatatcaa 33851055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 40508493 - 40508566
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||||| |||||||| ||||||||| ||||||||||||| ||||||||||||| ||||    
T  40508493 gagtgaatcatcaacttcgtccctgaattttcacgggtcggacaaattcgtcccttaattatgcgaaatctcaa 40508566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 40998515 - 40998583
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaat 180  Q
    |||||||||||||| || |||| |||||||| ||| |||||||||||| ||||||||||||||||||||    
T  40998515 gagtgaaccatcaagttagtccctgaattttcacgcgtcggtcaaattagtccctcaattatgcgaaat 40998583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 2975460 - 2975533
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| || ||||||||||||||||||||||||| || |  |||||| ||||||||| ||||||||||||||    
T  2975460 gagtgaatcaccaaattcgtccttgaatttttacggatcagctaaattcatccctcaatgatgcgaaatatcaa 2975533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 45255486 - 45255553
Alignment:
Q  115 tgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatat 182  Q
    |||| |||||| ||||||| ||||||||||||| |||||||| ||| || ||||||||||| ||||||    
T  45255486 tgaatcatcaacttcgtccctgaatttttacggatcggtcaacttcatcactcaattatgcaaaatat 45255553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 3150262 - 3150331
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||||||| ||||||||| |||| ||||||||||||| |||||    
T  3150262 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagt 3150331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 54898447 - 54898508
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    ||||||||||||||||||||| |    |||||||||||||||||| |||| |||||||||||    
T  54898447 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatc 54898508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 2226286 - 2226225
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    ||||||||||||||||||||| |    |||| ||||||||||||| |||| |||||||||||    
T  2226286 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatc 2226225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 30600052 - 30599991
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    |||||||||||||| |||||||||   |||| |||||| |||||| |||| |||||||||||    
T  30600052 tcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatc 30599991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 38193589 - 38193520
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||| ||| ||||||||| |||| ||||||||||||| |||||    
T  38193589 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagt 38193520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 41944576 - 41944649
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||| ||||||||| ||||||| |||||||| | || |||| |||||||||||| |||||   |||||||||||    
T  41944576 gagtaaaccatcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatttaacgaaatatcaa 41944649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 41979431 - 41979362
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||| ||| ||||||||| |||| ||||||||||||| |||||    
T  41979431 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagt 41979362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 46308817 - 46308886
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||| ||| ||||||||| |||| ||||||||||||| |||||    
T  46308817 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagt 46308886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 46310515 - 46310446
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||| ||||||||| |    |||||||| ||||||||| |||| ||||||||||||| |||||    
T  46310515 tcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagt 46310446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 53094352 - 53094283
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||| ||| ||||||||| |||| ||||||||||||| |||||    
T  53094352 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagt 53094283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 53187752 - 53187821
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||| ||||||||||||| |    |||||||| ||||||||| |||| ||||||||||||| |||||    
T  53187752 tcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagt 53187821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 53190893 - 53190832
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    ||||||||||||||||||||| |    |||| ||||||||||||| |||| |||||||||||    
T  53190893 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatc 53190832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 37865425 - 37865457
Alignment:
Q  153 tcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||| ||||||||||||||||||||||||||||    
T  37865425 tcaacttcgtccctcaattatgcgaaatatcaa 37865457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 38596867 - 38596947
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  38596867 tgagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagt 38596947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 43318184 - 43318105
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||    
T  43318184 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagt 43318105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 38178218 - 38178138
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  38178218 tgagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagt 38178138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 38205442 - 38205362
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  38205442 tgagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagt 38205362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 32087511 - 32087593
Alignment:
Q  109 attgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||||||| |||||||| ||| |||| |||| ||||||||| ||||||||||||||||||||||||    
T  32087511 attgagtgaaccatcaaattcgtccctgaattttcacgcgtcgatcaacttcgtcccttaattatgcgaaatatcaacttagt 32087593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 32090019 - 32089943
Alignment:
Q  109 attgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||| |||||| ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  32090019 attgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaa 32089943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 32835876 - 32835949
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  32835876 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattatgcgaaatatcaa 32835949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 42619289 - 42619362
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  42619289 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaatttcgtccctcaattatgcgaaatatcaa 42619362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 18728726 - 18728647
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||||||| |||||||| ||  ||||| ||| ||||||||| ||||||||||||||||||||||||    
T  18728726 gagtgaaccatcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagt 18728647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 35292505 - 35292427
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||||||||||||||| |||| || |||| || ||| ||||||||||||||||||||||||||    
T  35292505 gagtgaaccatcaaattcgtccttgaatttttatgggt-ggccaaaatcatccttcaattatgcgaaatatcaacttagt 35292427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 40330608 - 40330533
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||| |||||| ||||||| |||||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  40330608 ttgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaattatgcgaaatatcaa 40330533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 33256400 - 33256477
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaactta 189  Q
    |||||||||||||||||||||| |||||||||||  ||||| ||| ||| ||| ||||||||||||||||||||||||    
T  33256400 gagtgaaccatcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaactta 33256477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 35395333 - 35395412
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||| ||| |||||||| ||  ||||| ||| |||||||||||||||||||||||||||| |||||    
T  35395333 gagtgaaccatcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagt 35395412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 18726562 - 18726644
Alignment:
Q  109 attgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||| |||||| ||||||| |||||||||||||||    ||| |||||||||||||||||||||||||||| |||||    
T  18726562 attgagtgaatcatcaacttcgtccctgaatttttacgggttccccaacttcgtccctcaattatgcgaaatatcaatttagt 18726644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 33257843 - 33257778
Alignment:
Q  120 catcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| ||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  33257843 catcaacttcgtccctgaatttttacgggtcggccaacttcgtcccttaattatgcgaaatatcaa 33257778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 38176647 - 38176705
Alignment:
Q  127 ttcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||||| | |||| || ||||||||||||| ||||||||||||||||||    
T  38176647 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaa 38176705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 38203871 - 38203929
Alignment:
Q  127 ttcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||||| | |||| || ||||||||||||| ||||||||||||||||||    
T  38203871 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaa 38203929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 2852896 - 2852965
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||||||| ||||||||| |||| ||||||||||||| |||||    
T  2852896 tcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagt 2852965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 30463910 - 30463971
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    ||||||||||||||||||||| |    |||||||||||||||||| |||| |||||||||||    
T  30463910 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatc 30463971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 24496761 - 24496816
Alignment:
Q  130 gtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| ||||| ||||  ||||||||||| |||||||||||||| ||||||||||    
T  24496761 gtccttaaatttgtacgaatcggtcaaatttgtccctcaattatgtgaaatatcaa 24496816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 28822169 - 28822111
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaat 180  Q
    |||||||||||||||||||||||    | |||||||||||||||| |||| ||||||||    
T  28822169 tcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaat 28822111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 17574328 - 17574389
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    ||||||||||||||||||||| |    |||| ||||||||||||| |||| |||||||||||    
T  17574328 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatc 17574389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 36057727 - 36057666
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    ||||||||||||||||||||| |    |||| ||||||||||||| |||| |||||||||||    
T  36057727 tcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatc 36057666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 9e-32; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 42897900 - 42897819
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  42897900 ttgagtgaaccatcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagt 42897819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 37526148 - 37526068
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||| | | ||||||||||||||||||||||||||    
T  37526148 tgagtgaaccatcaaattcgtccttgaattttcacgcgtcggtcaaattcattcttcaattatgcgaaatatcaacttagt 37526068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 31821417 - 31821497
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||| ||||||||||||| |||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  31821417 tgagtgaacaatcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagt 31821497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 462494 - 462415
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |||||||||||| | |||| ||||||| ||| ||||||||||||||||||||||||||    
T  462494 gagtgaaccatcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagt 462415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 33160272 - 33160193
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||| |||||||||||||||||||||||||| || |||||| ||||||| ||||||||||||| ||||||||||||||||    
T  33160272 gagtaaaccatcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagt 33160193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 40019155 - 40019229
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||| |||||| |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  40019155 tgagtgaatcatcaacttcgtctttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaa 40019229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 1320617 - 1320696
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||| |||||| |||||| |||||||||  |||||| |||||||||||||| |||||||||||||||    
T  1320617 gagtgaaccatcaaatttgtccttaaattttcacgggtcggctaaattcatccctcaattatgcaaaatatcaacttagt 1320696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 38882922 - 38882848
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||| ||| |||| ||||||| |||||||    
T  38882922 tgagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaa 38882848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 31201267 - 31201194
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| || |||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  31201267 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccatcaattatgcgaaatatcaa 31201194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 8654500 - 8654572
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatca 184  Q
    |||||||||||||| || |||  |||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  8654500 gagtgaaccatcaatttagtctctgaatttttacgagtcggtcaaattcgttcctcaattatgcgaaatatca 8654572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 32822360 - 32822440
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||| |||||||||||||||||| || |||| ||||||| ||||||||||||   |||||||||||||||    
T  32822360 tgagtgaaccatcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagt 32822440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 31823569 - 31823494
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| | |||||| ||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  31823569 ttgagtggatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaa 31823494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 37524873 - 37524931
Alignment:
Q  127 ttcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  37524873 ttcgtccttgaatttttacgggtcggtcaaattcatcccttaattatgtgaaatatcaa 37524931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 25707392 - 25707315
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaactta 189  Q
    ||||||| |||||| ||| ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||||||||||    
T  25707392 gagtgaatcatcaagttcatccttaaatttttacgcatcggccaaattcatccctcaattatgcgaaatatcaactta 25707315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 33368759 - 33368832
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| ||||||||||||| |||||||||||||  |||||| ||||| || |||||||||||||||||||||    
T  33368759 gagtgaatcatcaaattcgtctttgaatttttacgaatcggtcgaattcatctctcaattatgcgaaatatcaa 33368832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 33748332 - 33748405
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||||| |||||||| ||||||||| ||| ||||||| ||||||||||||||||||||    
T  33748332 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaa 33748405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 461184 - 461245
Alignment:
Q  120 catcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaata 181  Q
    |||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||    
T  461184 catcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgtgaaata 461245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 25373713 - 25373636
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaactta 189  Q
    ||||||| |||||| ||| |||||||||||| |||  |||| ||||||| | ||||||||||||||||||||||||||    
T  25373713 gagtgaatcatcaagttcatccttgaattttcacgcatcggccaaattcattcctcaattatgcgaaatatcaactta 25373636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 38881429 - 38881501
Alignment:
Q  113 agtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| ||||||||||||||||||||||| |||  || | ||||||| ||||||||||||||||||| ||||    
T  38881429 agtgaatcatcaaattcgtccttgaattttcacgaatcagccaaattcatccctcaattatgcgaaatgtcaa 38881501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 32824364 - 32824289
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||| |||||| || ||   |||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  32824364 ttgagtgaatcatcaactttgtttctgaattttcacgggtcggccaaattagtccctcaattatgcgaaatatcaa 32824289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 31199484 - 31199558
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||| |||||| || |||| |||||| | ||||||||| ||||||||||||| ||||||| ||||||||||    
T  31199484 tgagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtcccttaattatgagaaatatcaa 31199558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 42894784 - 42894849
Alignment:
Q  120 catcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| || ||| ||||||||| ||||||||  ||||||||||||| ||||||||||||||||||    
T  42894784 catcaactttgtctttgaattttcacgggtcgaccaaattcgtcccttaattatgcgaaatatcaa 42894849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 24526894 - 24526969
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| || |||| | ||||||| |||||||  ||||||||| ||| ||||||||||||||||| ||||||||||    
T  24526894 ttgagtaaatcatccacttcgtccctgaatttacacgggtcggccaacttcgtccctcaattatgtgaaatatcaa 24526969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 33750471 - 33750429
Alignment:
Q  149 tcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||| ||| ||||||||||||||||||||||||||||||||||    
T  33750471 tcggccaacttcgtccctcaattatgcgaaatatcaacttagt 33750429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 9184382 - 9184462
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||| |||||| |||||||||||||||  |||  |||| |||||||||| | ||| || |||||||||||| |||||    
T  9184382 tgagtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagt 9184462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 8656053 - 8656005
Alignment:
Q  135 tgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||| ||||||||||||||||||||||  ||||| |||||||||||||||    
T  8656053 tgaatatttacgggtcggtcaaattcgt--ctcaactatgcgaaatatcaa 8656005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 10267857 - 10267908
Alignment:
Q  131 tccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatat 182  Q
    ||||||||||||||||  ||||||||| |||||| | |||||||||||||||    
T  10267857 tccttgaatttttacgaatcggtcaaaatcgtcctttaattatgcgaaatat 10267908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 28433834 - 28433767
Alignment:
Q  118 accatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||| ||||||| |||||||| | || |||| ||||||||||||||||||   |||||||||||    
T  28433834 accatcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaa 28433767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 33158659 - 33158729
Alignment:
Q  115 tgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||| |||||| ||||||||||||||||||  ||| | |||||||| |   ||||||||||||||||||||    
T  33158659 tgaatcatcaacttcgtccttgaatttttataggtggctcaaattcattattcaattatgcgaaatatcaa 33158729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 13282488 - 13282549
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    ||||||||||||||||||||| |    |||| ||||||||||||| |||| |||||||||||    
T  13282488 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatc 13282549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 27691164 - 27691233
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||| ||| ||||||||| |||| ||||||||||||| |||||    
T  27691164 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagt 27691233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 29237161 - 29237230
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||||||| ||||||||| |||| | ||||||||||| |||||    
T  29237161 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagt 29237230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 33707216 - 33707285
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||||||| ||||||||| |||| | ||||||||||| |||||    
T  33707216 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagt 33707285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 34681145 - 34681084
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    ||||||||||||||||||||| |    |||| ||||||||||||| |||| |||||||||||    
T  34681145 tcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatc 34681084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 35509224 - 35509293
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||| ||||||||||||| |    |||||||| ||||||||| |||| ||||||||||||| |||||    
T  35509224 tcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagt 35509293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 40020759 - 40020686
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| ||||||| ||||| |||| ||||| | ||||||||||||  ||||   |||||||||||    
T  40020759 gagtgaaccatcaatttcgtccctgaatctttaggggtctgccaaattcgtccccaaatttaacgaaatatcaa 40020686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 42943505 - 42943444
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    ||||||||||||||||||||| |    |||| ||||||||||||| |||| |||||||||||    
T  42943505 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatc 42943444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 9186737 - 9186657
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||| |||||| | |||||||||||||  | || || | |||| |||||||  |||||||||||||||||| |||||    
T  9186737 tgagtgaatcatcaactccgtccttgaatttacaaggatcagccaaaatcgtccccaaattatgcgaaatatcaaattagt 9186657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 25705308 - 25705368
Alignment:
Q  121 atcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaata 181  Q
    ||||| |||||||||||||||| |||  |||||||||  |||| |||||||||| ||||||    
T  25705308 atcaagttcgtccttgaattttcacgtatcggtcaaaaacgtctctcaattatgggaaata 25705368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 9e-32; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 47341812 - 47341731
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  47341812 ttgagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagt 47341731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 33038922 - 33038842
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  33038922 tgagtgaatcatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagt 33038842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 23953805 - 23953884
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  23953805 gagtgaaccatcaaattcgtccttaaatttttacgggtcggtaaaattcgtccatcaattatgcgaaatatcaacttagt 23953884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 38613605 - 38613526
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  38613605 gagtgaaccatcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagt 38613526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 45465275 - 45465202
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45465275 gagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaa 45465202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 46996827 - 46996747
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||||| |||||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  46996827 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagt 46996747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 2167479 - 2167558
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||  |||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2167479 gagtgaaccatcaaatatgtccttgaattagtacgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagt 2167558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 38614883 - 38614804
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||| |||||| | |||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||    
T  38614883 gagtgaatcatcaactacgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagt 38614804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 38615035 - 38614956
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||| |||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||    
T  38615035 gagtgaaacatcaaattcgtccttaaattttcacgggtcgatcaaattcatccctcaattatgcgaaatattaacttagt 38614956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 2492327 - 2492404
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaactta 189  Q
    |||| |||||||||||||||||| |||||||||||||||||||||| |  ||| ||||||||||||||||||||||||    
T  2492327 gagtaaaccatcaaattcgtcctcgaatttttacgggtcggtcaaaattatccttcaattatgcgaaatatcaactta 2492404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 30108565 - 30108638
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  30108565 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaa 30108638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 40784346 - 40784425
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||||| |||||||||||||| ||| |  |||||| ||| ||||||||||||||||||||||||||    
T  40784346 gagtgaaccatcaaattcgttcttgaatttttacgcgtcagctaaattcatccttcaattatgcgaaatatcaacttagt 40784425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 46812706 - 46812627
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||| | |||||||||| |||||    
T  46812706 gagtgaaccatcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagt 46812627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 33775408 - 33775481
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| | |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  33775408 gagtgaatcgtcaacttcgtccctgaatttttacgggtcggtcaacttcgtccttcaattatgcgaaatatcaa 33775481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 4321036 - 4321111
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||| |||||| ||||||| |||||||| ||||||||| ||| ||||||||| ||||||||||||||||||    
T  4321036 ttgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaa 4321111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 46994654 - 46994733
Alignment:
Q  106 aagattgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||| |||||||| |||||| ||||||| |||||||| ||||||||| ||| ||||||| ||||||||||||||||||||    
T  46994654 aagaatgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaa 46994733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 8421415 - 8421489
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||| |||||| || |||| |||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  8421415 tgagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaa 8421489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 8423405 - 8423332
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| || |||| |||||||| ||||||| | |||||| |||||||||||||||||||||||||    
T  8423405 gagtgaaccatcaatttagtccctgaattttcacgggtcagccaaatttgtccctcaattatgcgaaatatcaa 8423332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 27955370 - 27955447
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaactta 189  Q
    ||||||| |||||||||||||||||||||||||||| || |  |||||| |||||||||| | |||||||||||||||    
T  27955370 gagtgaatcatcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaactta 27955447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 35342425 - 35342498
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| || |||| |||||| ||||||||||| |||||| |||||||||||||||||||||||||    
T  35342425 gagtgaatcatcaacttagtccctgaattattacgggtcggccaaatttgtccctcaattatgcgaaatatcaa 35342498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 35344414 - 35344341
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| || ||||  ||||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  35344414 gagtgaaccatcaatttagtccccgaattttcacgggtcagccaaattcgtccctcaattatgcgaaatatcaa 35344341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 40785639 - 40785566
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| |||||||||||||||| ||||||||| ||||||| || |||||||||| ||||||||||    
T  40785639 gagtgaatcatcaatttcgtccttgaattttcacgggtcggccaaattcatctctcaattatgtgaaatatcaa 40785566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 3690151 - 3690223
Alignment:
Q  113 agtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| |||||| ||||||||||||||||||| | |||| ||| ||||| ||||||||||||||||||||||    
T  3690151 agtgaatcatcaacttcgtccttgaatttttacagttcggccaacttcgttcctcaattatgcgaaatatcaa 3690223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 46810707 - 46810778
Alignment:
Q  114 gtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||| |||||| ||||||| |||||||| |||| |||| |||||| |||||||||||||||||||||||||    
T  46810707 gtgaatcatcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaa 46810778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 21751062 - 21751004
Alignment:
Q  53 tcaattacatgattaggaacatactgaaaggtatacaacaaactaatatgatgaagatt 111  Q
    |||||||||||||  |||||| |||||||||||||||||| ||||||||||||||||||    
T  21751062 tcaattacatgatcgggaacaaactgaaaggtatacaacagactaatatgatgaagatt 21751004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 33037701 - 33037766
Alignment:
Q  120 catcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| |||||||||||||||||| | ||||| ||||||| ||||||||||||| ||||||||||    
T  33037701 catcaagttcgtccttgaatttttatgtgtcggccaaattcatccctcaattatgtgaaatatcaa 33037766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 36762763 - 36762698
Alignment:
Q  120 catcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| ||||||| ||||||||||||| |||| |||||| |||||||||||||| ||||||||||    
T  36762763 catcaacttcgtccctgaatttttacggatcggccaaattagtccctcaattatgtgaaatatcaa 36762698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 45463667 - 45463743
Alignment:
Q  109 attgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||||||||||| ||||||| |||||||| | ||||||| ||||||||||||| ||||   |||||||||||    
T  45463667 attgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaa 45463743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 47339784 - 47339849
Alignment:
Q  120 catcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| ||||||| ||||||| |||||||||| ||| |||||| |||||| ||||||||||||||    
T  47339784 catcaacttcgtccctgaatttctacgggtcggccaacttcgtctctcaatgatgcgaaatatcaa 47339849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 36756973 - 36756901
Alignment:
Q  113 agtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| |||||| ||||| | |||||||| | || ||||||||||| |||||||||||||| ||||||||||    
T  36756973 agtgaatcatcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaa 36756901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 36766497 - 36766425
Alignment:
Q  113 agtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| |||||| ||||| | |||||||| | || ||||||||||| |||||||||||||| ||||||||||    
T  36766497 agtgaatcatcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaa 36766425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 2168925 - 2168846
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||| |||||| ||||||||||||||||||| |||||  ||||||| ||||| ||||| |  ||||||||| |||||    
T  2168925 gagtgaatcatcaacttcgtccttgaatttttactggtcgtccaaattcatcccttaattaagaaaaatatcaatttagt 2168846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 23955378 - 23955303
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||| |||||| ||||||  |||||||||| || | || ||||||||||||| ||||||| ||||||||||    
T  23955378 ttgagtgaatcatcaacttcgtctctgaatttttatggattggccaaattcgtcccttaattatgtgaaatatcaa 23955303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 39857655 - 39857716
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    ||||||||||||||||||||| |    |||||||||||||||||| |||| |||||||||||    
T  39857655 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatc 39857716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 30109789 - 30109717
Alignment:
Q  113 agtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||||||| ||||||| |||||||| | ||||||| ||||||||||||  ||||   |||||||||||    
T  30109789 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 30109717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 27666179 - 27666110
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||| ||| ||||||||| |||| ||||||||||||| |||||    
T  27666179 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagt 27666110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 35403698 - 35403629
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||| ||| ||||||||| |||| ||||||||||||| |||||    
T  35403698 tcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagt 35403629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 38474257 - 38474196
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    ||||||| ||||| |||||||||    |||||||||||||||||| |||| |||||||||||    
T  38474257 tcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatc 38474196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 1e-30; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 42134482 - 42134561
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  42134482 gagtgaaccatcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagt 42134561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 33685372 - 33685299
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33685372 gagtgaaccatcaaattcgtccctgaatttttacgggtcggtcaaattcatccctcaattatgcgaaatatcaa 33685299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 18184067 - 18183988
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||| || ||||||||||||||||||||||||||||||    
T  18184067 gagtgaaccatcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagt 18183988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 36895635 - 36895555
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||| |||| |||||||| ||| ||||||||| ||||||| ||||||||||||||||||||||||||    
T  36895635 tgagtgaaccatcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagt 36895555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 44157433 - 44157512
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||| |||||||| |||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||    
T  44157433 gagtgaaccatcaaactcgtccttaaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaacttagt 44157512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 46638934 - 46638852
Alignment:
Q  109 attgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||||| | |||||||| ||| ||||| ||| ||| ||||||||||||||||||||||||||||||    
T  46638934 attgagtgaaccatcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagt 46638852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 5784958 - 5784885
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  5784958 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaacttcgtccctcaattatgcgaaatatcaa 5784885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 35480099 - 35480022
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaactta 189  Q
    |||||||||||||| |||||||||||||||| |||| || | ||||||| ||||||||||||||||||||||||||||    
T  35480099 gagtgaaccatcaacttcgtccttgaattttcacggatcagccaaattcatccctcaattatgcgaaatatcaactta 35480022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 11152544 - 11152618
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||| |||||| ||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  11152544 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaatttcgtccctcaattatgcgaaatatcaa 11152618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 27940608 - 27940681
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| || |||| |||||||| || ||| |||||||||||||||||||||||||||||||||||    
T  27940608 gagtgaaccatcaatttagtccctgaattttcacaggttggtcaaattcgtccctcaattatgcgaaatatcaa 27940681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 33679259 - 33679332
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| || |||| |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  33679259 gagtgaatcatcaattttgtccatgaatttttacgggtcagccaaattcgtccctcaattatgcgaaatatcaa 33679332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 31801633 - 31801712
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||| ||| ||||||||||||| | |||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  31801633 gagtaaacaatcaaattcgtccctaaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagt 31801712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 191
Target Start/End: Complemental strand, 45381092 - 45381029
Alignment:
Q  128 tcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||| ||||||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  45381092 tcgtccttaaatttttacgggaaggtcaaattcatccctcaattatgcgaaatatcaacttagt 45381029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 47269582 - 47269507
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||||||||||||| |||||||| ||| ||||| |||||| ||||||||||||| |||||| ||||    
T  47269582 ttgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatacgaaatttcaa 47269507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 31803792 - 31803718
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||| |||||| ||||||| |||||||| ||||||||| ||| ||||||| ||||||||||||||||||||    
T  31803792 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaa 31803718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 45379085 - 45379158
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||||| |||||||| ||||||||| ||| ||||||||| ||||||||||||||||||    
T  45379085 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaa 45379158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 27952583 - 27952518
Alignment:
Q  120 catcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| || |||| |||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  27952583 catcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaa 27952518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 35478087 - 35478160
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||| ||| |||||||| ||||||||| |||||| ||||||||||||||| |||||||||    
T  35478087 gagtgaatcatcaacttcatccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaa 35478160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 47264123 - 47264197
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||||||||| || |||| |||||||| ||| ||||| ||| || |||||||||||||||||||| ||||    
T  47264123 tgagtgaaccatcaagttagtccctgaattttcacgcgtcggccaatttagtccctcaattatgcgaaatttcaa 47264197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 36894830 - 36894890
Alignment:
Q  120 catcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaat 180  Q
    |||||| ||||||| |||||||||||||||||| ||| ||||||  |||||||||||||||    
T  36894830 catcaacttcgtccctgaatttttacgggtcggccaacttcgtcattcaattatgcgaaat 36894890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 46636766 - 46636838
Alignment:
Q  113 agtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| |||||| ||||||  |||||||| |||||||||  || ||||||| ||||||||||||||||||||    
T  46636766 agtgaatcatcaacttcgtctctgaattttcacgggtcggctaacttcgtccttcaattatgcgaaatatcaa 46636838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 18180499 - 18180573
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||| | |||| || |||| |||||||| |||  |||| ||||||| ||||||||||||||||||||||||    
T  18180499 tgagtgaatcctcaactttgtccctgaattttcacgactcggccaaattcatccctcaattatgcgaaatatcaa 18180573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 2869589 - 2869650
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    ||||||||||||||||||||| |    |||||||||||||||||| |||| |||||||||||    
T  2869589 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatc 2869650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 5783364 - 5783437
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| ||||||| |||||||||| ||||||| ||||||| || | |||||   |||||||||||    
T  5783364 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatctcccaatttaacgaaatatcaa 5783437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 26223597 - 26223666
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||||||| ||||||||| |||| ||||||||||||| |||||    
T  26223597 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagt 26223666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 42136335 - 42136262
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||| | | |||||||| || |||||||| ||||||| | ||||||||||||||||||    
T  42136335 gagtgaatcatcaacttcgttcctaaatttttatggatcggtcaacttcgtcctttaattatgcgaaatatcaa 42136262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 6577195 - 6577123
Alignment:
Q  113 agtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||| |||||| ||||||| |||  ||||| |||||||  ||||| |||| ||||||||||||||||||||    
T  6577195 agtgaatcatcaacttcgtccctgacattttatgggtcggctaaattagtccttcaattatgcgaaatatcaa 6577123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 25278482 - 25278423
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaata 181  Q
    ||||||||||||||||||||| |    |||||||||||||||||| |||| |||||||||    
T  25278482 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaata 25278423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 37344352 - 37344411
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaata 181  Q
    ||||||||||||||||||||| |    |||||||||||||||||| |||| |||||||||    
T  37344352 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaata 37344411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 33599229 - 33599291
Alignment:
Q  123 caaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||||||||| |    |||||||||||||||| | |||| |||||||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaa 33599291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 4856080 - 4856011
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||| ||||| ||||||| |||| ||||||||||||| |||||    
T  4856080 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagt 4856011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 31236829 - 31236890
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    ||||||||||||||||||||| |    ||||||||||| |||||| |||| |||||||||||    
T  31236829 tcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatc 31236890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 33602758 - 33602689
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||||||| ||||||||| |||| || |||||||||| |||||    
T  33602758 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagt 33602689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 34778252 - 34778183
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||| ||||| ||||||| |||| ||||||||||||| |||||    
T  34778252 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagt 34778183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 46583670 - 46583601
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||||||| || |||||| |||| ||||||||||||| |||||    
T  46583670 tcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagt 46583601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 6e-30; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 25619661 - 25619739
Alignment:
Q  113 agtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||    
T  25619661 agtgaaccatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagt 25619739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 15432328 - 15432407
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||    
T  15432328 gagtgaaccatcaaatttatccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagt 15432407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 37417273 - 37417352
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||| ||||||||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  37417273 gagtgaaccatcatattcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagt 37417352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 42880902 - 42880829
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42880902 gagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaaattcgtcccttaattatgcgaaatatcaa 42880829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 42879360 - 42879434
Alignment:
Q  116 gaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  42879360 gaaccatcaaattcgtccttaaatttttacgggtcggtcaaattcatcccttaattatgcgaaa-atcaacttagt 42879434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 41234 - 41160
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||| |||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  41234 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaa 41160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 28248267 - 28248193
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||| |||||| ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  28248267 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaa 28248193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 39560 - 39629
Alignment:
Q  116 gaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||| || |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39560 gaaccatcaatttagtccctgaatttttacgggtcggccaaattcgtccctcaattatgcgaaatatcaa 39629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 41706539 - 41706612
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| || || | |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41706539 gagtgaaccatcaatttagttcctgaattttcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 41706612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 42001609 - 42001683
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||||||||||||||||||||||||||||||||| |  ||||||  |||||| |||||||||||||||||    
T  42001609 tgagtgaaccatcaaattcgtccttgaatttttacgggttgtccaaatttatccctctattatgcgaaatatcaa 42001683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 11021533 - 11021606
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  11021533 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaa 11021606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 29909784 - 29909705
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||| |||| |||||||| ||| ||||| ||| || ||||||||||||||||||||||||| |||||    
T  29909784 gagtgaaccatcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagt 29909705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 15372498 - 15372572
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||||||||| || |||| |||||||| ||||||||| |||||||| ||||||||||||| |||||||||    
T  15372498 tgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgcccctcaattatgcaaaatatcaa 15372572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 92470 - 92392
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||| |||| |||||||| |||  || ||||| ||||| ||||||||||||||||||||||||||||    
T  92470 gagtgaaccatcaaatt-gtccctgaattttcacgcatcagtcaacttcgtacctcaattatgcgaaatatcaacttagt 92392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 37418860 - 37418787
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||| |||||||||| ||||||||| ||||||||||| | |||||||| |||||||||    
T  37418860 gagtgaatcatcaacttcgtacttgaattttcacgggtcggccaaattcgtcctttaattatgcaaaatatcaa 37418787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 41708521 - 41708448
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| || |||  |||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  41708521 gagtgaatcatcaacttagtctctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaa 41708448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 39521 - 39442
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||| ||||  ||||||| ||| ||| | ||| || || ||||||||||||||||||||||||||||    
T  39521 gagtgaaccatcaaatttgtccccgaattttcacgcgtcagccaactttgtacctcaattatgcgaaatatcaacttagt 39442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 15373981 - 15373906
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||| |||||| || |||| |||||| | || |||||| ||||||||| ||||||||||||||||||||||    
T  15373981 ttgagtgaatcatcaacttagtccctgaattatcacaggtcggccaaattcgttcctcaattatgcgaaatatcaa 15373906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 42003582 - 42003508
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||| ||| || ||||| |||||||||||| || || ||||||||||| | ||||||||||||||||||||    
T  42003582 tgagtgaatcattaacttcgttcttgaatttttaaggatcagtcaaattcgttcatcaattatgcgaaatatcaa 42003508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 16763086 - 16763147
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    |||||||||||||||||||||||    |||||||||||||||||| |||| |||||||||||    
T  16763086 tcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatc 16763147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 28246663 - 28246736
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||  ||||   |||||||||||    
T  28246663 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 28246736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 361445 - 361524
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||| |||||| |||||||||||||||| | |  |||| |||| || ||||||||||||| |||||||||| |||||    
T  361445 gagtgaatcatcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaaattagt 361524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 25620667 - 25620611
Alignment:
Q  113 agtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaa 169  Q
    |||||| ||| || |||||| ||||||||| ||||||||||||||||| ||||||||    
T  25620667 agtgaatcattaagttcgtctttgaattttcacgggtcggtcaaattcatccctcaa 25620611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 19906694 - 19906753
Alignment:
Q  124 aaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    ||||||||||||||||||| |    |||||||||||||||||| |||| |||||||||||    
T  19906694 aaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatc 19906753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 2766944 - 2767005
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatc 183  Q
    |||||||||||||||||||||||    ||||||||| |||||| | |||| |||||||||||    
T  2766944 tcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatc 2767005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 11023132 - 11023064
Alignment:
Q  116 gaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||| ||||||| |||||||| | ||||||| |||||||||||| |||||   |||||||||||    
T  11023132 gaaccatcaatttcgtccctgaattttca-gggtcggccaaattcgtcccccaatttaacgaaatatcaa 11023064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 16764690 - 16764621
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||| ||| ||||||||| |||| ||||||||||||| |||||    
T  16764690 tcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagt 16764621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 20942074 - 20942029
Alignment:
Q  120 catcaaattcgtccttgaatttttacgggtcggtcaaattcgtccc 165  Q
    |||||||||||||||||||||| || || ||||||||||| |||||    
T  20942074 catcaaattcgtccttgaatttgtaaggatcggtcaaatttgtccc 20942029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 39663166 - 39663223
Alignment:
Q  124 aaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaata 181  Q
    |||||||||||||||||||||    |||||||||||||||||| |||| ||| |||||    
T  39663166 aaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaata 39663223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 9e-29; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 44558618 - 44558538
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  44558618 tgagtgaaccatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagt 44558538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 43778389 - 43778462
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43778389 gagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaa 43778462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 51042056 - 51041975
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||    
T  51042056 ttgagtgaaccgtcaaattcgtccttaaatttttacaggtcggtcaaattcatccctcaattatgtgaaatatcaacttagt 51041975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 39085244 - 39085170
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||| |||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39085244 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaa 39085170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 4519373 - 4519454
Alignment:
Q  109 attgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttag 190  Q
    ||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||||||||||||||||| |||||    
T  4519373 attgagtgaacaatcaaattcgtccttgaatttttaccggttggccaaattcatccctcaattatgcgaaatatcagcttag 4519454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 47941811 - 47941884
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47941811 gagtgaaccatcaatttagtccctgaatttttacgggtcggtcaaattcgtctctcaattatgcgaaatatcaa 47941884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 44992806 - 44992881
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||| |||||| ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  44992806 ttgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaa 44992881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 10372831 - 10372757
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||||||||||||||||| |||||||| ||| ||||| |||||| |||||||||||||||||||||||||    
T  10372831 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaa 10372757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 42879274 - 42879348
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||| |||||| ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  42879274 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaa 42879348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 39923098 - 39923025
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| ||||||| ||||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  39923098 gagtgaaccatcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaa 39923025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 4520542 - 4520463
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||| |||||| |||||||||||||||||| | ||||| ||||||| ||| ||||||||||||||||||||||||||    
T  4520542 gagtgaatcatcaacttcgtccttgaatttttatgagtcggccaaattcatccatcaattatgcgaaatatcaacttagt 4520463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 10762580 - 10762654
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||||||||||||||||| |||||||| ||| ||||| |||||| |||||||||||||||||||| ||||    
T  10762580 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaa 10762654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 44794884 - 44794811
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| || |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||    
T  44794884 gagtgaaccatcaatttagtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaa 44794811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 27624806 - 27624885
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||  |||| |||| |||||||||||||||||| |||||||||| ||  ||||||||||||||||||||||||||    
T  27624806 gagtgaacggtcaacttcgcccttgaatttttacgggttggtcaaattcatctttcaattatgcgaaatatcaacttagt 27624885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 44556629 - 44556699
Alignment:
Q  121 atcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||| || |||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  44556629 atcaactttgtccctgaatttttacgggtcggtcaaattagtccctcaattatgtgaaatatcaatttagt 44556699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 2350631 - 2350558
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| || |||| |||||||| | ||||||| |||||| |||||||||||||||||||||||||    
T  2350631 gagtgaaccatcaatttagtccctgaattttcatgggtcggccaaatttgtccctcaattatgcgaaatatcaa 2350558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 2828502 - 2828429
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||||| |||||||||| ||||||| ||| || |||||||||||||||||||||||||    
T  2828502 gagtgaatcatcaacttcgtccctgaatttttatgggtcggccaactttgtccctcaattatgcgaaatatcaa 2828429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 47942837 - 47942764
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| || || | |||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  47942837 gagtgaatcatcaacttagttcatgaattatcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 47942764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 44792931 - 44793007
Alignment:
Q  109 attgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| || |||||| || |||| |||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  44792931 attgagttaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaa 44793007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 10371057 - 10371130
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| || |||| |||||||| ||| |||||  ||||| |||||||||||||||||||||||||    
T  10371057 gagtgaaccatcaacttagtccctgaattttcacgcgtcggctaaattagtccctcaattatgcgaaatatcaa 10371130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 35996063 - 35996136
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| || |||  || ||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  35996063 gagtgaaccatcaatttagtctctggatttttatgggtcggtcaaattcgtccctcaattgtgcaaaatatcaa 35996136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 39083638 - 39083712
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||||||||| ||||||| |||||||| | ||||||| ||||||||||||| ||||   |||||||||||    
T  39083638 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaa 39083712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 2827407 - 2827483
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||||||||||||||||||| | |||||| ||  ||||| |||   ||||||||||||||| ||||||||||||||||    
T  2827407 gagtgaaccatcaaattcgtccctaaattttcacacgtcggccaa---cgtccctcaattatgtgaaatatcaacttagt 2827483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 5484540 - 5484613
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||  ||||   |||||||||||    
T  5484540 gagtgaaccatcaatttcgtccatgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 5484613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 5486143 - 5486070
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| ||||||| |||||||||| ||||||| ||||||| ||||| ||||   |||||||||||    
T  5486143 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatccctaaatttaacgaaatatcaa 5486070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 10768041 - 10767973
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaat 180  Q
    |||||||||||||| || || | |||||||| ||| ||||| |||||| ||||||||||||||||||||    
T  10768041 gagtgaaccatcaagttagttcctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaat 10767973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 230436 - 230515
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||| |||||| ||  ||||||| ||| || || |||| |||| ||||||||||||||||||||||||||| |||||    
T  230436 gagtgaatcatcaactttatccttgagtttgtaaggatcggccaaaatcgtccctcaattatgcgaaatatcaaattagt 230515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 51040757 - 51040808
Alignment:
Q  134 ttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||| ||||||||| ||||||| ||| ||||||||||||||||||||    
T  51040757 ttgaattttcacgggtcggccaaattcatccttcaattatgcgaaatatcaa 51040808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 39921493 - 39921567
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||||||||| ||||||| |||||||| | ||||||| ||||||||||||  ||||   |||||||||||    
T  39921493 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 39921567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 319283 - 319352
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||||||| ||||||||| |||| ||||||||||||| |||||    
T  319283 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagt 319352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 39189383 - 39189455
Alignment:
Q  113 agtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||||||| ||||||| |||||||| | ||||||| ||||||||||||  ||||   |||||||||||    
T  39189383 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 39189455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 185
Target Start/End: Complemental strand, 42880884 - 42880806
Alignment:
Q  107 agattgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||| |||||||||||||| || |||| |||||||| | ||||||| ||||||||||||  ||||   |||||||||||    
T  42880884 agatagagtgaaccatcaattttgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 42880806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 4173819 - 4173750
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||| ||| ||||||||| |||| ||||||||||||| |||||    
T  4173819 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagt 4173750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 33264392 - 33264461
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||||||| ||||||||| |||| ||| ||||||||| |||||    
T  33264392 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagt 33264461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 43507177 - 43507246
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||| ||| ||||||||| |||| ||||||||||||| |||||    
T  43507177 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagt 43507246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 43508732 - 43508663
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||| ||| ||||||||| |||| ||||||||||||| |||||    
T  43508732 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagt 43508663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 43519434 - 43519503
Alignment:
Q  122 tcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||||| |    |||| ||| ||||||||| |||| ||||||||||||| |||||    
T  43519434 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagt 43519503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 43779991 - 43779918
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||| |||| ||||||| |||||||| | ||||||| ||||||||||||  ||||   |||||||||||    
T  43779991 gagtgaaccttcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 43779918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 39190869 - 39190837
Alignment:
Q  153 tcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||| ||||||||||||||||||||||||||||    
T  39190869 tcaacttcgtccctcaattatgcgaaatatcaa 39190837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 3e-22; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 17950561 - 17950634
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  17950561 gagtgaaccatcaatttcatccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaa 17950634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 4641355 - 4641428
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| || |||| |||||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  4641355 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaa 4641428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 29077328 - 29077401
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||||||||||| |||||||| ||| ||||| |||||| |||||||||||||||||||| ||||    
T  29077328 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaa 29077401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 4646307 - 4646234
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| ||  ||| ||||||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  4646307 gagtgaaccatcaacttaatccctgaatttttacggatcggttaaattcgtccatcaattatgcgaaatatcaa 4646234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 30639611 - 30639684
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||| |||||| ||||||| |||||||| ||||||||| |||||| ||||||||||||||| |||||||||    
T  30639611 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaa 30639684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 3018541 - 3018477
Alignment:
Q  127 ttcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||| |||||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  3018541 ttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagt 3018477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 35174389 - 35174464
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||| |||||| ||||||| |||||||||||||||||| ||| |||||  ||||||||| |||||||||||    
T  35174389 ttgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtttctcaattatacgaaatatcaa 35174464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 2968139 - 2968212
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| || |||| | |||||| |||||||   ||||||||||||||||||||||||||||||||    
T  2968139 gagtgaaccatcaatttagtccctcaattttcacgggtctcccaaattcgtccctcaattatgcgaaatatcaa 2968212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 29112300 - 29112373
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| || |||| |||||||| ||| ||||| |||||| |||||||||||||||||||| ||||    
T  29112300 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaa 29112373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 29114869 - 29114794
Alignment:
Q  110 ttgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||||| || |||| |||||||| ||| ||||| |||||| |||| ||||||||||||||| ||||    
T  29114869 ttgagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccttcaattatgcgaaatttcaa 29114794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 3018587 - 3018528
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaatt 171  Q
    |||||||||||||||||||||| |||||||| ||| ||||| ||| ||||||||| ||||    
T  3018587 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctgaatt 3018528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 13613694 - 13613627
Alignment:
Q  124 aaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    ||||||||||||||||||| |    |||||||||||||||||| |||| ||||||||||||| |||||    
T  13613694 aaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagt 13613627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 17952167 - 17952093
Alignment:
Q  111 tgagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    ||||||||||||||| ||||||| |||||||| | ||||||| ||||||||||||  ||||   |||||||||||    
T  17952167 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 17952093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 31210530 - 31210461
Alignment:
Q  113 agtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatat 182  Q
    |||||| |||||  ||||| ||||||||| || || ||||||||| |||||||| |||||||||||||||    
T  31210530 agtgaatcatcagcttcgttcttgaatttgtaaggatcggtcaaaatcgtcccttaattatgcgaaatat 31210461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 35175987 - 35175936
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtc 163  Q
    |||||||||||||| |||||||||||||||| | || |||| ||||||||||    
T  35175987 gagtgaaccatcaatttcgtccttgaattttcagggatcggccaaattcgtc 35175936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 21134978 - 21135056
Alignment:
Q  113 agtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaacttagt 191  Q
    |||||| ||| || ||||||||||||||| || || ||||||||| ||||| | || |||| ||||||||||| |||||    
T  21134978 agtgaatcattaacttcgtccttgaatttgtaaggatcggtcaaaatcgtctcccagttatacgaaatatcaaattagt 21135056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 6758 - 6685
Alignment:
Q  112 gagtgaaccatcaaattcgtccttgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 185  Q
    |||||||||||||| || |||| |||||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  6758 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaa 6685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 2121 - 2175
Alignment:
Q  135 tgaatttttacgggtcggtcaaattcgtccctcaattatgcgaaatatcaactta 189  Q
    ||||||||||||  |||  ||||||| ||||||||||||||||||||||||||||    
T  2121 tgaatttttacgcatcgaccaaattcatccctcaattatgcgaaatatcaactta 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 17233 - 17183
Alignment:
Q  61 atgattaggaacatactgaaaggtatacaacaaactaatatgatgaagatt 111  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||| ||||||    
T  17233 atgatcaggaacaaactgaaaggtatacaacagactaatatgataaagatt 17183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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