View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0896_high_42 (Length: 206)
Name: NF0896_high_42
Description: NF0896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0896_high_42 |
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Alignment Details
Target: chr2 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 6775432 - 6775584
Alignment:
| Q |
1 |
ttgaagatggagaaggatctgtttttgttgctgatgaagtagtggggagtgttggaagttcaggaataggatctgattgtgaatatgatgaaaggatagg |
100 |
Q |
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| T |
6775432 |
ttgaagatggagaaggatctgtttttgttgctgatgaagtagtggggagtgttggaagttcaggaataggatctgattgtgaatatgatgaaaggatagg |
6775531 |
T |
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| Q |
101 |
tgaaggcatgaaaagcatgatgatcattagtactgaataaactgtgaatgatg |
153 |
Q |
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|||||||||||||| |||||||||||||||||||| | ||||||||||||||| |
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| T |
6775532 |
tgaaggcatgaaaaccatgatgatcattagtactgcagaaactgtgaatgatg |
6775584 |
T |
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