View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0896_low_1 (Length: 759)

Name: NF0896_low_1
Description: NF0896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0896_low_1
NF0896_low_1
[»] chr1 (33 HSPs)
chr1 (219-759)||(44303725-44304267)
chr1 (30-201)||(44304291-44304462)
chr1 (360-744)||(44318347-44318734)
chr1 (30-130)||(44312188-44312288)
chr1 (122-195)||(44311134-44311207)
chr1 (623-718)||(44195902-44195997)
chr1 (629-707)||(19920957-19921035)
chr1 (648-736)||(51847536-51847624)
chr1 (623-721)||(13360685-13360783)
chr1 (508-600)||(9595739-9595831)
chr1 (623-701)||(47905619-47905697)
chr1 (276-340)||(44311004-44311068)
chr1 (623-710)||(318239-318326)
chr1 (521-600)||(23079952-23080031)
chr1 (623-701)||(2925865-2925943)
chr1 (623-701)||(13061327-13061405)
chr1 (623-701)||(23871393-23871471)
chr1 (623-701)||(27500057-27500135)
chr1 (623-701)||(32299175-32299253)
chr1 (623-701)||(39889588-39889666)
chr1 (623-699)||(1523670-1523746)
chr1 (623-699)||(12293887-12293963)
chr1 (641-701)||(17688412-17688472)
chr1 (634-701)||(47206365-47206432)
chr1 (623-701)||(896425-896503)
chr1 (623-701)||(2175407-2175485)
chr1 (623-701)||(13255417-13255495)
chr1 (623-701)||(14153184-14153262)
chr1 (623-701)||(33991614-33991692)
chr1 (623-701)||(42488557-42488635)
chr1 (623-701)||(50402814-50402892)
chr1 (665-703)||(50566171-50566209)
chr1 (636-701)||(7964047-7964112)
[»] chr4 (29 HSPs)
chr4 (508-712)||(8828591-8828800)
chr4 (511-712)||(22845046-22845251)
chr4 (623-738)||(50333530-50333649)
chr4 (623-701)||(16878770-16878850)
chr4 (644-712)||(39192186-39192254)
chr4 (623-701)||(20534000-20534078)
chr4 (623-701)||(38317158-38317236)
chr4 (623-701)||(41844508-41844586)
chr4 (642-703)||(6973544-6973605)
chr4 (623-704)||(26593348-26593429)
chr4 (636-720)||(46176565-46176649)
chr4 (622-701)||(3126941-3127020)
chr4 (623-701)||(7182121-7182199)
chr4 (623-701)||(17873269-17873347)
chr4 (623-701)||(31530092-31530170)
chr4 (623-701)||(32060719-32060797)
chr4 (623-701)||(37756653-37756731)
chr4 (623-701)||(41363742-41363820)
chr4 (623-701)||(47669883-47669961)
chr4 (623-701)||(52594556-52594634)
chr4 (678-754)||(45899403-45899480)
chr4 (641-732)||(19154082-19154167)
chr4 (669-704)||(47687645-47687680)
chr4 (623-701)||(23708209-23708287)
chr4 (623-701)||(24291458-24291536)
chr4 (642-712)||(26702639-26702709)
chr4 (548-602)||(46176685-46176739)
chr4 (623-701)||(48830744-48830822)
chr4 (623-701)||(49404553-49404631)
[»] chr5 (14 HSPs)
chr5 (563-738)||(12229341-12229518)
chr5 (519-611)||(19386239-19386330)
chr5 (641-709)||(28435014-28435082)
chr5 (641-720)||(31849205-31849284)
chr5 (629-718)||(20500942-20501031)
chr5 (623-703)||(4648917-4648997)
chr5 (671-719)||(19386531-19386578)
chr5 (633-701)||(25598709-25598777)
chr5 (635-701)||(17092970-17093036)
chr5 (623-701)||(27480102-27480180)
chr5 (623-701)||(38302288-38302366)
chr5 (550-603)||(31323272-31323325)
chr5 (550-603)||(31370911-31370964)
chr5 (554-603)||(31849106-31849155)
[»] chr7 (16 HSPs)
chr7 (623-709)||(19679261-19679347)
chr7 (641-720)||(38353041-38353120)
chr7 (623-701)||(42620282-42620360)
chr7 (513-601)||(20513485-20513574)
chr7 (623-701)||(5967983-5968061)
chr7 (623-697)||(33113569-33113643)
chr7 (623-701)||(38235867-38235945)
chr7 (623-701)||(43188930-43189008)
chr7 (623-701)||(47275932-47276010)
chr7 (623-703)||(33810142-33810222)
chr7 (623-699)||(43778505-43778581)
chr7 (622-701)||(41002180-41002259)
chr7 (648-710)||(4178273-4178335)
chr7 (623-701)||(28437472-28437550)
chr7 (623-701)||(33406562-33406640)
chr7 (633-701)||(36747368-36747437)
[»] chr3 (20 HSPs)
chr3 (643-736)||(51936252-51936345)
chr3 (623-703)||(25428739-25428819)
chr3 (623-701)||(38526226-38526304)
chr3 (641-710)||(44979461-44979530)
chr3 (623-701)||(2420732-2420810)
chr3 (623-701)||(7661109-7661187)
chr3 (623-701)||(30131816-30131894)
chr3 (623-701)||(38593025-38593103)
chr3 (623-701)||(41961907-41961985)
chr3 (623-701)||(43007452-43007530)
chr3 (623-701)||(47789376-47789454)
chr3 (628-701)||(39499271-39499344)
chr3 (622-699)||(55439659-55439736)
chr3 (633-701)||(47714613-47714681)
chr3 (628-703)||(38515308-38515383)
chr3 (623-701)||(30121452-30121530)
chr3 (623-701)||(43237363-43237441)
chr3 (556-606)||(44979555-44979605)
chr3 (623-701)||(46017278-46017356)
chr3 (623-701)||(49860909-49860987)
[»] chr2 (20 HSPs)
chr2 (641-718)||(25463693-25463770)
chr2 (641-720)||(12940376-12940455)
chr2 (623-701)||(3038877-3038955)
chr2 (623-701)||(4042037-4042115)
chr2 (623-701)||(8410860-8410938)
chr2 (623-701)||(8555706-8555784)
chr2 (623-701)||(13765869-13765947)
chr2 (623-701)||(36567208-36567286)
chr2 (623-701)||(40357530-40357608)
chr2 (623-720)||(26051921-26052018)
chr2 (628-701)||(31899291-31899364)
chr2 (633-701)||(3119792-3119860)
chr2 (633-701)||(18826166-18826234)
chr2 (623-703)||(38023377-38023457)
chr2 (623-703)||(44020410-44020490)
chr2 (623-701)||(32243547-32243626)
chr2 (667-736)||(2057395-2057465)
chr2 (623-697)||(8990893-8990967)
chr2 (623-701)||(31550192-31550270)
chr2 (623-701)||(38293961-38294039)
[»] scaffold1562 (1 HSPs)
scaffold1562 (623-703)||(211-291)
[»] scaffold1158 (1 HSPs)
scaffold1158 (623-703)||(2302-2382)
[»] chr8 (11 HSPs)
chr8 (641-704)||(8950394-8950458)
chr8 (623-701)||(34349788-34349866)
chr8 (631-701)||(1941991-1942061)
chr8 (623-701)||(3404504-3404582)
chr8 (623-701)||(34272588-34272666)
chr8 (623-701)||(36102820-36102898)
chr8 (623-701)||(36906260-36906338)
chr8 (623-703)||(37659461-37659541)
chr8 (622-701)||(2474696-2474775)
chr8 (622-701)||(25033453-25033532)
chr8 (623-701)||(13865022-13865100)
[»] chr6 (10 HSPs)
chr6 (634-706)||(24801809-24801881)
chr6 (623-701)||(23095058-23095136)
chr6 (634-738)||(6026208-6026311)
chr6 (623-701)||(24734953-24735031)
chr6 (623-701)||(26574325-26574403)
chr6 (623-701)||(34914700-34914778)
chr6 (623-701)||(1029366-1029444)
chr6 (623-701)||(5825405-5825483)
chr6 (623-701)||(26481061-26481139)
chr6 (623-701)||(29241763-29241841)
[»] scaffold0026 (1 HSPs)
scaffold0026 (641-704)||(74648-74709)
[»] scaffold0717 (1 HSPs)
scaffold0717 (623-701)||(1651-1729)
[»] scaffold0028 (1 HSPs)
scaffold0028 (623-701)||(35385-35463)
[»] scaffold0952 (1 HSPs)
scaffold0952 (623-701)||(3600-3678)


Alignment Details
Target: chr1 (Bit Score: 471; Significance: 0; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 471; E-Value: 0
Query Start/End: Original strand, 219 - 759
Target Start/End: Complemental strand, 44304267 - 44303725
Alignment:
Q  219 cttttccaataaaaatgaa--gctcattggtaatccgcagaggcagtcctcaaatgtgtatctttttgaagctccaagagatagtttggaaaattttata 316  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44304267 cttttccaataaaaatgaaaagctcattggtaatccgcagaggcggtcctcaaatgtgtatctttctgaagctccaagagatagtttggaaaattttata 44304168  T
Q  317 tgaagttcatggtccatcacatactctaagatcgactacttttctatttcacttgacctgcaaagtatgagttttgtattggaccatggtactcacggtc 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44304167 tgaagttcatggtccatcacatactctaagatcgactacttttctatttcaattgacctgcaaagtatgagttttgtattggaccatggtactcacggtc 44304068  T
Q  417 catcaattttttgtccttcgtacgtttaccacttcaagatgaaacacatcttcacagattatcattatgtttgaaaacaagttcaggatagaaaacttag 516  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  44304067 catcaattttttgtccttcatacgtttaccacttcaagatgaaacacatcttcacggattatcattatgtttgaaaacaagtttaggatagaaaacttag 44303968  T
Q  517 gctttgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaatttaagtgnnnnn 616  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  44303967 gctttatttaggagtttggaggaaaagagaagggagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaatttaagtgttttt 44303868  T
Q  617 nnagttaatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaa 716  Q
      ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  44303867 ctagttaatgttaaaataatattaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaaccccgaa 44303768  T
Q  717 aaacgtttctccaatacaatttctagtttcccaaattaaaaaa 759  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  44303767 aaacgtttctccaatacaatttctagtttcccaaattaaaaaa 44303725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 30 - 201
Target Start/End: Complemental strand, 44304462 - 44304291
Alignment:
Q  30 agtttaagggaccaatgagggtgagatcaattgcaaggacttaacatgatacaaagtttaaggtttaattcaaaaccatgaacttttattaataaaatat 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44304462 agtttaagggaacaatgagggtgagatcaattgcaaggacttaacatgatacaaagtttagggtttaattcaaaaccatgaacttttattaataaaatat 44304363  T
Q  130 ttgtaagaagtacaaatgtacaataataagacctttcttttatttgttaacctttttccactaaaatgtggt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  44304362 ttgtaagaagtacaaatgtacaataataagacctttcttttatttattaaccttttcccactaaaatgtggt 44304291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 360 - 744
Target Start/End: Complemental strand, 44318734 - 44318347
Alignment:
Q  360 ctatttcacttgacctgcaaagtatgagttttgtattggac---catggtactcacggtccatcaattttttgtccttcgtacgtttaccacttcaagat 456  Q
    |||||||| ||||| |||||||| |||||||||||||||||   ||||| |||| |||||||||||| || |||||||  ||| |||||||||  |||||    
T  44318734 ctatttcaattgacgtgcaaagtttgagttttgtattggacatacatggaactcgcggtccatcaatattatgtcctttatacatttaccactctaagat 44318635  T
Q  457 gaaacacatcttcacagattatcattatgtttgaaaacaagttcaggatagaaaacttaggctttgtttaggagtttgaaggaaaagagaagggagt-gt 555  Q
    |||||||| |||||| ||| |||||||||||||||||||||||  | | |||||| ||||  |||| ||  ||||||| | || ||  | |||| || ||    
T  44318634 gaaacacaccttcacggataatcattatgtttgaaaacaagtttggcaaagaaaa-ttagaatttgcttcagagtttggaagagaa-tggagggtgtcgt 44318537  T
Q  556 tttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaatttaagtgnnnnnnnagttaatgttaaaataatactaatgattaatgtactt 655  Q
    |||  |||||||| |||| | |||||| ||||||||||||| |||   ||| ||||       | | |||| ||||| |||||| |  | ||||||||||    
T  44318536 tttaaaaggatgagattaaaggaaaaattagataaatcttttaaatttttttagtgtttttttaatgaatgataaaagaatacttagaaataatgtactt 44318437  T
Q  656 ttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaa-cccccaaaaacgtttctccaatacaatttctagtt 744  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||| |||||||||| |||||    
T  44318436 ttaattttgcgagtataataacaatatatattggatttgaaaaatttatccaaatccccccaaaacgttcctctaatacaatttttagtt 44318347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 44312288 - 44312188
Alignment:
Q  30 agtttaagggaccaatgagggtgagatcaattgcaaggacttaacatgatacaaagtttaaggtttaattcaaaaccatgaacttttattaataaaatat 129  Q
    |||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  44312288 agtttaaggggctaatgagggtgagatcaattgcaaagacttaacatgatacaaagtttaaggtttaattcaaaaccatgaacttttattcataaaatat 44312189  T
Q  130 t 130  Q
    |    
T  44312188 t 44312188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 44311207 - 44311134
Alignment:
Q  122 taaaatatttgtaagaagtacaaatgtacaataataagacctttcttttatttgttaacctttttccactaaaa 195  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  44311207 taaaatatttataagaagtacaaatgtacaataataagacctttcttttatttattaagcttttcccactaaaa 44311134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 623 - 718
Target Start/End: Complemental strand, 44195997 - 44195902
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaa 718  Q
    |||| ||||| |||||| | |||||||||||||| ||||| | || |||||| |||||||||||||||||||||||||||||||||| | ||||||    
T  44195997 aatgataaaagaatacttacgattaatgtactttcaattttgtgaatattatcacaatatatattggatttgaaaaatttacccaaatctccaaaa 44195902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 629 - 707
Target Start/End: Complemental strand, 19921035 - 19920957
Alignment:
Q  629 aaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttaccca 707  Q
    |||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||| |||||| |||||| |||||    
T  19921035 aaaagaatactaatcattaatgtacttttaattttgtgagtattataacaatatatatttgatttggaaaattcaccca 19920957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 648 - 736
Target Start/End: Original strand, 51847536 - 51847624
Alignment:
Q  648 atgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaacgtttctccaatacaat 736  Q
    ||||||||||||||| || | |||||||||||||||||||||||||||||||||||  |||||| || |||||  || |||||||||||    
T  51847536 atgtacttttaattttgcaaatattataacaatatatattggatttgaaaaatttattcaaacctcccaaaactcttatccaatacaat 51847624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 623 - 721
Target Start/End: Original strand, 13360685 - 13360783
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaacg 721  Q
    |||| ||||| ||||||  | ||| ||||| ||||||||| || ||||||||| ||||||||||||||||| |||||||||||||||||| | ||||||    
T  13360685 aatgataaaagaatacttttaattgatgtatttttaattttgcaagtattatagcaatatatattggatttaaaaaatttacccaaaccctccaaaacg 13360783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 508 - 600
Target Start/End: Complemental strand, 9595831 - 9595739
Alignment:
Q  508 aaaacttaggctttgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaa 600  Q
    |||||| ||||||||||| |||||||| |||  ||| || ||||| |||||||| |||||| ||||||  |||||||||| ||||||||||||    
T  9595831 aaaactaaggctttgtttgggagtttggaggggaagggaggggagggttttggagggatgagattagagaaaaaaatagagaaatctttcaaa 9595739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 47905619 - 47905697
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||||||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  47905619 aatgataaactaatactaatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 47905697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 276 - 340
Target Start/End: Complemental strand, 44311068 - 44311004
Alignment:
Q  276 atctttttgaagctccaagagatagtttggaaaattttatatgaagttcatggtccatcacatac 340  Q
    |||||| |||||||||||||||||||||  |||| | |||||||||||||||||| ||| |||||    
T  44311068 atctttctgaagctccaagagatagtttaaaaaagtatatatgaagttcatggtctatctcatac 44311004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 623 - 710
Target Start/End: Original strand, 318239 - 318326
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaac 710  Q
    |||| ||||| |||| | ||| |||||| ||||||||||| | ||||||||||||||||||||||  ||||  |||||||||| ||||    
T  318239 aatgataaaagaatatttatgcttaatgcacttttaattttgtgagtattataacaatatatattaaattttgaaaatttacctaaac 318326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 521 - 600
Target Start/End: Complemental strand, 23080031 - 23079952
Alignment:
Q  521 tgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaa 600  Q
    ||||| |||||||| || | ||| ||| |||| |||||||| ||||||||||||| ||||||||||| |||| |||||||    
T  23080031 tgtttgggagtttggagaagaagggaatggagggttttggagggatgatattagaggaaaaaatagaaaaatatttcaaa 23079952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 2925865 - 2925943
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||||||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||  ||||||||||||    
T  2925865 aatgataaaataatacttatgattaatatacttttaattttaagaatattataacaacatagattaaatttgaaaaatt 2925943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 13061327 - 13061405
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  13061327 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 13061405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 23871393 - 23871471
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  23871393 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 23871471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 27500135 - 27500057
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  27500135 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 27500057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 32299253 - 32299175
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  32299253 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 32299175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 39889588 - 39889666
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  39889588 aatgataaactaatacttatgattaatatacttttaattttatgaatattataacaacatagattgaatttgaaaaatt 39889666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 699
Target Start/End: Complemental strand, 1523746 - 1523670
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaa 699  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||    
T  1523746 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaa 1523670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 699
Target Start/End: Complemental strand, 12293963 - 12293887
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaa 699  Q
    |||| |||| ||||||| || |||||| ||||||||||||   || ||||||||||| |||||||| ||||||||||    
T  12293963 aatgataaactaatacttattattaatatacttttaattttaagaatattataacaacatatattgaatttgaaaaa 12293887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 641 - 701
Target Start/End: Complemental strand, 17688472 - 17688412
Alignment:
Q  641 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    ||||||||| ||||||||||||   || ||||||||||| |||||||| ||||||||||||    
T  17688472 atgattaatatacttttaattttaagaatattataacaacatatattgaatttgaaaaatt 17688412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 701
Target Start/End: Original strand, 47206365 - 47206432
Alignment:
Q  634 aatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  47206365 aatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 47206432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 896425 - 896503
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| || |||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  896425 aatggtaaactaatacttataattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 896503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 2175485 - 2175407
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  2175485 aatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 2175407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 13255495 - 13255417
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||| ||||   || ||||||||||| ||| |||| ||||||||||||    
T  13255495 aatgataaactaatacttatgattaatatacttttgattttaagaatattataacaacatagattgaatttgaaaaatt 13255417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 14153262 - 14153184
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  14153262 aatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 14153184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 33991692 - 33991614
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| ||| ||||| |||||||    
T  33991692 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatttgatttaaaaaatt 33991614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 42488557 - 42488635
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||| ||||   || ||||||||||| ||| |||| ||||||||||||    
T  42488557 aatgataaactaatacttatgattaatatacttttgattttaagaatattataacaacatagattgaatttgaaaaatt 42488635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 50402892 - 50402814
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| || |||||||||    | ||||||||||| ||| |||||||||||||||||    
T  50402892 aatgataaactaatacttatgattaatatatttttaattttaaaaatattataacaacatagattggatttgaaaaatt 50402814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 665 - 703
Target Start/End: Original strand, 50566171 - 50566209
Alignment:
Q  665 cgagtattataacaatatatattggatttgaaaaattta 703  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  50566171 cgagtattataactatgtatattggatttgaaaaattta 50566209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 7964112 - 7964047
Alignment:
Q  636 tactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  7964112 tacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 7964047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 6e-30; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 508 - 712
Target Start/End: Complemental strand, 8828800 - 8828591
Alignment:
Q  508 aaaacttaggctttgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaag-aaaaaatagataaatctttcaaaaaattt 606  Q
    |||||||||| |||||||||||||||| |||| ||| ||||||||  ||||| | |||||| |||||| | |||||||||| ||||||||||||   |||    
T  8828800 aaaacttaggttttgtttaggagtttggaggagaagcgaagggaggattttgaagggatgagattagagggaaaaaatagagaaatctttcaaacttttt 8828701  T
Q  607 aag----tgnnnnnnnagttaatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattt 702  Q
    |||    ||       ||| |||| ||||| || ||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||    
T  8828700 aagagtgtgtttttctagtgaatgataaaagaacacttatggttaatgtacttttaattttccgagtattataacaatatatattggattttgaaaattt 8828601  T
Q  703 acccaaaccc 712  Q
    ||||||||||    
T  8828600 acccaaaccc 8828591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 511 - 712
Target Start/End: Original strand, 22845046 - 22845251
Alignment:
Q  511 acttaggctttgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaatttaagt 610  Q
    ||||||||||||||| |||||||| |||  ||| || ||||| | |||||| |||||| |||||| ||||||||| | ||||||||||||||| || |||    
T  22845046 acttaggctttgtttgggagtttggaggggaagggaggggagggctttggagggatgagattagaggaaaaaataaagaaatctttcaaaaaaattgagt 22845145  T
Q  611 gnnnnnnn----agttaatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttaccc 706  Q
    |           ||| |||| ||||| |||||  ||| ||||| ||||||||||||  | ||| |||||||||||||||||||||||| ||||||||||     
T  22845146 gtgtgtttttctagtgaatgataaaagaatacgtatggttaatatacttttaattttccaagtgttataacaatatatattggatttggaaaatttacca 22845245  T
Q  707 aaaccc 712  Q
    ||||||    
T  22845246 aaaccc 22845251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 623 - 738
Target Start/End: Original strand, 50333530 - 50333649
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataaca----atatatattggatttgaaaaatttacccaaacccccaaaa 718  Q
    |||| ||||| | |||| |||||||||| ||||||||||| | |||||||||||||    |||||||||||||||| ||||||||||||||||||  |||    
T  50333530 aatgataaaagattacttatgattaatgcacttttaattttgtgagtattataacaatatatatatattggatttggaaaatttacccaaacccctcaaa 50333629  T
Q  719 acgtttctccaatacaattt 738  Q
    ||  | ||||| ||||||||    
T  50333630 accctcctccattacaattt 50333649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 16878850 - 16878770
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcg--agtattataacaatatatattggatttgaaaaatt 701  Q
    |||| ||||| |||||| ||||||||| || ||||||||| |||  |||||||||||||||||||||||||||| ||||||    
T  16878850 aatgataaaagaatacttatgattaatatatttttaattttgcgtgagtattataacaatatatattggatttggaaaatt 16878770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 644 - 712
Target Start/End: Original strand, 39192186 - 39192254
Alignment:
Q  644 attaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaaccc 712  Q
    |||||| |||||||| ||  | ||||||||||||||||||||||||||||| ||||||||| |||||||    
T  39192186 attaatatacttttacttctgtgagtattataacaatatatattggatttggaaaatttactcaaaccc 39192254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 20534078 - 20534000
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||  |||||||||||||  || ||||||||||| ||| |||||||||||||||||    
T  20534078 aatgataaactaatacttatgattaacatacttttaatttaaagaatattataacaacatagattggatttgaaaaatt 20534000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 38317158 - 38317236
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||||||||||||||||    
T  38317158 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattggatttgaaaaatt 38317236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 41844586 - 41844508
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||||||||||||||||    
T  41844586 aatgataaattaatacttatgattaatatacttttaattttaagaatattataacaagatagattggatttgaaaaatt 41844508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 642 - 703
Target Start/End: Original strand, 6973544 - 6973605
Alignment:
Q  642 tgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 703  Q
    ||||||||||| ||||||||| || ||||||||||||||||| |  ||||||||||||||||    
T  6973544 tgattaatgtatttttaattttgcaagtattataacaatatagaccggatttgaaaaattta 6973605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 623 - 704
Target Start/End: Original strand, 26593348 - 26593429
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttac 704  Q
    |||| ||||| ||||||  | |||||| |||||||||||| |||||||| |||||||||||||||| ||||| |||| ||||    
T  26593348 aatgataaaagaatacttttaattaatatacttttaattttgcgagtatcataacaatatatattgtatttggaaaacttac 26593429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 720
Target Start/End: Complemental strand, 46176649 - 46176565
Alignment:
Q  636 tactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaac 720  Q
    |||| |||||||||||| |||||| || |  ||||||||||||||||| ||| ||||||||||| | ||||||| |||| |||||    
T  46176649 tacttatgattaatgtatttttaactttgaaagtattataacaatatagattagatttgaaaaactcacccaaatcccccaaaac 46176565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 622 - 701
Target Start/End: Original strand, 3126941 - 3127020
Alignment:
Q  622 taatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    ||||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  3126941 taatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 3127020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 7182121 - 7182199
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  7182121 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 7182199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 17873347 - 17873269
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  17873347 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacataaattgaatttgaaaaatt 17873269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 31530170 - 31530092
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  31530170 aatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 31530092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 32060797 - 32060719
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  32060797 aatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 32060719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 37756653 - 37756731
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  37756653 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 37756731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 41363742 - 41363820
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  41363742 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 41363820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 47669961 - 47669883
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  47669961 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 47669883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 52594556 - 52594634
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| ||| |||||||||||||    
T  52594556 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattagatttgaaaaatt 52594634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 678 - 754
Target Start/End: Complemental strand, 45899480 - 45899403
Alignment:
Q  678 aatatatattggatttgaaaaatttacccaaacccccaaaaacgtttctccaatacaa-tttctagtttcccaaatta 754  Q
    ||||||||||||||||| ||||||||||||||| | | |||||  | ||||||||||| ||| ||||| |||||||||    
T  45899480 aatatatattggatttggaaaatttacccaaactctccaaaaccctcctccaatacaattttttagttccccaaatta 45899403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 641 - 732
Target Start/End: Complemental strand, 19154167 - 19154082
Alignment:
Q  641 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaacgtttctccaata 732  Q
    |||||||||||||||||||||| |||||||||||||  ||||      |||||||||| ||| | ||||||||| ||||| || ||||||||    
T  19154167 atgattaatgtacttttaattttgcgagtattataaacatat------gatttgaaaatttttctcaaaccccccaaaaccttcctccaata 19154082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 704
Target Start/End: Complemental strand, 47687680 - 47687645
Alignment:
Q  669 tattataacaatatatattggatttgaaaaatttac 704  Q
    |||||||||||||||||||| |||||||||||||||    
T  47687680 tattataacaatatatattgaatttgaaaaatttac 47687645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 23708287 - 23708209
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||  ||| ||| |||||||||||||||||    
T  23708287 aatgataaactaatacttatgattaatatacttttaattttaagaatattatggcaacatagattggatttgaaaaatt 23708209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 24291536 - 24291458
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| | | |||| ||||||||||||    
T  24291536 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacaaagattgaatttgaaaaatt 24291458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 642 - 712
Target Start/End: Original strand, 26702639 - 26702709
Alignment:
Q  642 tgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaaccc 712  Q
    ||||| ||||||||||||||| || ||||||||||||  |||  ||||||||| ||||||||  |||||||    
T  26702639 tgattgatgtacttttaattttgcaagtattataacagcataatttggatttggaaaatttattcaaaccc 26702709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 548 - 602
Target Start/End: Complemental strand, 46176739 - 46176685
Alignment:
Q  548 gggagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaaaa 602  Q
    ||||| |||||||| ||||||  ||||| ||||||||||| ||||||||||||||    
T  46176739 gggagggttttggagggatgagtttagaggaaaaaatagagaaatctttcaaaaa 46176685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 48830744 - 48830822
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||  |||| ||||||||||||    
T  48830744 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacattgattgaatttgaaaaatt 48830822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 49404553 - 49404631
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| || |||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  49404553 aatgataaactattacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 49404631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 2e-26; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 563 - 738
Target Start/End: Original strand, 12229341 - 12229518
Alignment:
Q  563 ggatgatattagaagaaaaaatagataaatctttcaaaaaatttaa--gtgnnnnnnnagttaatgttaaaataatactaatgattaatgtacttttaat 660  Q
    |||||| |||||| | |||||||||||| |||||||||||| || |  |||       ||| |||| ||||| |||||| ||||||||||||||||| ||    
T  12229341 ggatgagattagagggaaaaatagataagtctttcaaaaaaattgactgtgtttttctagtcaatgataaaagaatacttatgattaatgtacttttgat 12229440  T
Q  661 ttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaacgtttctccaatacaattt 738  Q
    || |||||||| |||||||||||||||| ||||| ||||||||||||||| ||| |||||  | ||| ||||||||||    
T  12229441 tttgcgagtatcataacaatatatattgaatttggaaaatttacccaaacaccccaaaaccctcctctaatacaattt 12229518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 519 - 611
Target Start/End: Original strand, 19386239 - 19386330
Alignment:
Q  519 tttgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaatttaagtg 611  Q
    |||||||  ||||||| ||| |||| |||||||| |||||||| |||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  19386239 tttgtttgtgagtttggaggcaaag-gaagggagggttttggagggatgaaattagaagaaagaatagataaatctttcaaaaaatttgagtg 19386330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 641 - 709
Target Start/End: Original strand, 28435014 - 28435082
Alignment:
Q  641 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaa 709  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||  ||||||||| ||||    
T  28435014 atgattaatgtacttttaattttgcaagtattataacaatatatattggatttagaaaatttactcaaa 28435082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 641 - 720
Target Start/End: Original strand, 31849205 - 31849284
Alignment:
Q  641 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaac 720  Q
    |||||||||||||||||| ||| ||||||||||||| ||| ||||||||||||  ||||||||| ||||||||| |||||    
T  31849205 atgattaatgtacttttagttttgcgagtattataaaaatttatattggatttagaaaatttactcaaaccccctaaaac 31849284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 629 - 718
Target Start/End: Complemental strand, 20501031 - 20500942
Alignment:
Q  629 aaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaa 718  Q
    |||| |||||| ||||||||| | |||||||||| | ||||||||||||||||||||| | ||||| || |||||  ||||||| |||||    
T  20501031 aaaagaatacttatgattaattttcttttaattttgtgagtattataacaatatatatcgaatttggaatatttaatcaaaccctcaaaa 20500942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 703
Target Start/End: Original strand, 4648917 - 4648997
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 703  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || || |||||||| ||| |||| ||||||||||||||    
T  4648917 aatgataaactaatacttatgattaatatacttttaattttaagaatactataacaacatagattgaatttgaaaaattta 4648997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 671 - 719
Target Start/End: Original strand, 19386531 - 19386578
Alignment:
Q  671 ttataacaatatatattggatttgaaaaatttacccaaacccccaaaaa 719  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||||    
T  19386531 ttataacaatatatattgga-ttaaaaaatttacccaaaccctcaaaaa 19386578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 633 - 701
Target Start/End: Original strand, 25598709 - 25598777
Alignment:
Q  633 taatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    ||||||| ||||||||| ||||||||||||    | ||||||| ||||||| |||||||||||||||||    
T  25598709 taatacttatgattaatatacttttaattttaaaaatattatagcaatatagattggatttgaaaaatt 25598777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 635 - 701
Target Start/End: Complemental strand, 17093036 - 17092970
Alignment:
Q  635 atactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    ||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  17093036 atacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 17092970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 27480102 - 27480180
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||  ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  27480102 aatgataaactaatacatatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 27480180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 38302288 - 38302366
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||||| || ||| |||| ||||||||||||    
T  38302288 aatgataaactaatacttatgattaatatacttttaattttaagaatattataataacatagattgaatttgaaaaatt 38302366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 603
Target Start/End: Original strand, 31323272 - 31323325
Alignment:
Q  550 gagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaa 603  Q
    |||||||||||| |||||| | |||| ||||||||||| |||| ||||||||||    
T  31323272 gagtgttttggagggatgagactagaggaaaaaatagagaaatatttcaaaaaa 31323325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 603
Target Start/End: Original strand, 31370911 - 31370964
Alignment:
Q  550 gagtgttttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaa 603  Q
    ||||||||||||  ||||| |||||| ||||||||||| |||| ||||||||||    
T  31370911 gagtgttttggagagatgagattagaggaaaaaatagagaaatatttcaaaaaa 31370964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 603
Target Start/End: Original strand, 31849106 - 31849155
Alignment:
Q  554 gttttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaa 603  Q
    ||||||||||||||| |||||| |||||||||  ||||||||| ||||||    
T  31849106 gttttggaaggatgagattagaggaaaaaataagtaaatctttaaaaaaa 31849155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 19679347 - 19679261
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaa 709  Q
    |||| ||||| |||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  19679347 aatgataaaagaatacttatgattaatgtacttttaattttgcgagtattataataatatatattgaatttggaaaatttacccaaa 19679261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 641 - 720
Target Start/End: Original strand, 38353041 - 38353120
Alignment:
Q  641 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaac 720  Q
    ||||||||||||||||||||||  | |||||||||| ||||||| ||| ||| |||||||||||||||||  ||||||||    
T  38353041 atgattaatgtacttttaattttacaagtattataaaaatatattttgaattagaaaaatttacccaaacatccaaaaac 38353120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 42620282 - 42620360
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||||||| |||| ||||||||||||    
T  42620282 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaatatagattgaatttgaaaaatt 42620360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 513 - 601
Target Start/End: Complemental strand, 20513574 - 20513485
Alignment:
Q  513 ttaggctttgtttaggagtttgaaggaaaagagaagggagtgttttggaaggatgatattagaa-gaaaaaatagataaatctttcaaaa 601  Q
    ||||||||||||| || ||||| |||  ||| || ||||| |||||||| |||||| ||||||| ||||||||||| |||||||||||||    
T  20513574 ttaggctttgtttgggtgtttgtaggggaagggaggggagggttttggagggatgagattagaaggaaaaaatagagaaatctttcaaaa 20513485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 5967983 - 5968061
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  5967983 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 5968061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 697
Target Start/End: Original strand, 33113569 - 33113643
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaa 697  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||||||||||||    
T  33113569 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacataaattggatttgaaa 33113643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 38235945 - 38235867
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||    | ||||||||||||||| |||| ||||||||||||    
T  38235945 aatgataaactaatacttatgattaatatacttttaattttaaaaatattataacaatatagattgaatttgaaaaatt 38235867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 43189008 - 43188930
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  43189008 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 43188930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 47275932 - 47276010
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||||| || ||| |||||||||||||||||    
T  47275932 aatgataaactaatacttatgattaatatacttttaattttaagaatattataataacatagattggatttgaaaaatt 47276010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 703
Target Start/End: Original strand, 33810142 - 33810222
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 703  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || ||||||||||| |||||| | ||||||||||||||    
T  33810142 aatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatatatagaatttgaaaaattta 33810222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 699
Target Start/End: Original strand, 43778505 - 43778581
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaa 699  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || ||||||||||||||| |||| ||||||||||    
T  43778505 aatgataaactaatatttatgattaatatacttttaattttaagaatattataacaatatagattgaatttgaaaaa 43778581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 701
Target Start/End: Original strand, 41002180 - 41002259
Alignment:
Q  622 taatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    ||||| |||| ||||||| ||||||||| || |||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  41002180 taatgataaactaatacttatgattaatatatttttaattttaagaatattataacaacatagattgaatttgaaaaatt 41002259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 648 - 710
Target Start/End: Original strand, 4178273 - 4178335
Alignment:
Q  648 atgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaac 710  Q
    ||||||||||||||| | ||||||||||||  |||||||| ||||| ||||| ||| ||||||    
T  4178273 atgtacttttaattttgtgagtattataacggtatatattagatttaaaaaaattatccaaac 4178335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 28437472 - 28437550
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  28437472 aatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 28437550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 33406562 - 33406640
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||| ||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  33406562 aatgataaactaacacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 33406640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 633 - 701
Target Start/End: Complemental strand, 36747437 - 36747368
Alignment:
Q  633 taatactaatgattaatgtactttt-aatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    ||||||| ||||||||| ||||||| |||||   || ||||||||||||||| |||| ||||||||||||    
T  36747437 taatacttatgattaatatactttttaattttaagaatattataacaatatagattgaatttgaaaaatt 36747368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 5e-24; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 643 - 736
Target Start/End: Original strand, 51936252 - 51936345
Alignment:
Q  643 gattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaacgtttctccaatacaat 736  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||||||||||| | |||||  | ||||||||||||    
T  51936252 gattaatgtacttttaattttgcaagtattataacgatatatattggatttggaaaatttacccaaaccctctaaaaccatcctccaatacaat 51936345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 623 - 703
Target Start/End: Complemental strand, 25428819 - 25428739
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 703  Q
    |||| |||||||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||||    
T  25428819 aatgataaaataatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattta 25428739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 38526304 - 38526226
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| |||||||| ||||||||||||    
T  38526304 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatatattgaatttgaaaaatt 38526226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 641 - 710
Target Start/End: Complemental strand, 44979530 - 44979461
Alignment:
Q  641 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaac 710  Q
    |||||||||| | ||||||||| |  ||||||||||||| |||||||||||||| |||||||| ||||||    
T  44979530 atgattaatgaatttttaattttgaaagtattataacaacatatattggatttggaaaatttatccaaac 44979461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 2420810 - 2420732
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  2420810 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 2420732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 7661187 - 7661109
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||  ||||||||||||   || ||||||||||| |||||||| ||||||||||||    
T  7661187 aatgataaactaatacttatgattaacatacttttaattttaagaatattataacaacatatattgaatttgaaaaatt 7661109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 30131816 - 30131894
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  30131816 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaagatagattgaatttgaaaaatt 30131894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 38593103 - 38593025
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| | ||||||||||    ||||||||||||| |||||||| ||||||||||||    
T  38593103 aatgataaactaatacttatgattaatatgcttttaattttaaaagtattataacaacatatattgaatttgaaaaatt 38593025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 41961907 - 41961985
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  41961907 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 41961985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 43007452 - 43007530
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  43007452 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 43007530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 47789376 - 47789454
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  47789376 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 47789454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 701
Target Start/End: Complemental strand, 39499344 - 39499271
Alignment:
Q  628 taaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  39499344 taaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 39499271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 622 - 699
Target Start/End: Complemental strand, 55439736 - 55439659
Alignment:
Q  622 taatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaa 699  Q
    ||||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||    
T  55439736 taatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaa 55439659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 633 - 701
Target Start/End: Original strand, 47714613 - 47714681
Alignment:
Q  633 taatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  47714613 taatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 47714681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 703
Target Start/End: Complemental strand, 38515383 - 38515308
Alignment:
Q  628 taaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 703  Q
    |||| ||||||| ||||||||| ||||||||||||   || |||||| |||| ||| |||| ||||||||||||||    
T  38515383 taaactaatacttatgattaatatacttttaattttaagaatattatgacaacatagattgaatttgaaaaattta 38515308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 30121452 - 30121530
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||| |||| ||| |||| ||||||||||||    
T  30121452 aatgataaactaatacttatgattaatatacttttaattttaagaatattattacaacatagattgaatttgaaaaatt 30121530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 43237441 - 43237363
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| |||||||||  |||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  43237441 aatgataaactaatacttatgattaataaacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 43237363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 556 - 606
Target Start/End: Complemental strand, 44979605 - 44979555
Alignment:
Q  556 tttggaaggatgatattagaagaaaaaatagataaatctttcaaaaaattt 606  Q
    |||||| |||||| |||||| ||||||||||| |||||||||||||| |||    
T  44979605 tttggagggatgagattagaggaaaaaatagagaaatctttcaaaaatttt 44979555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 46017356 - 46017278
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||||||| ||| ||||||||| ||||||||||||    | ||||||||||| ||| |||| ||||||||||||    
T  46017356 aatgataaaataaaacttatgattaatatacttttaattttaaaaatattataacaacatagattgaatttgaaaaatt 46017278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 49860987 - 49860909
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| |||||| |||||    
T  49860987 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgataaatt 49860909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 641 - 718
Target Start/End: Original strand, 25463693 - 25463770
Alignment:
Q  641 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaa 718  Q
    ||||||||| || |||||||||  ||||||||||||||||||||   |||||| ||||||||| ||||||||||||||    
T  25463693 atgattaatataattttaatttttcgagtattataacaatatatgaaggatttaaaaaatttaaccaaacccccaaaa 25463770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 641 - 720
Target Start/End: Original strand, 12940376 - 12940455
Alignment:
Q  641 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaac 720  Q
    |||||||||||| ||  ||||| | ||||||||||||||  |||||||||||| |||||||||| ||||| ||| |||||    
T  12940376 atgattaatgtatttcaaattttgggagtattataacaacgtatattggatttaaaaaatttactcaaactccccaaaac 12940455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 3038877 - 3038955
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  3038877 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 3038955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 4042115 - 4042037
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  4042115 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 4042037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 8410860 - 8410938
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  8410860 aatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 8410938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 8555706 - 8555784
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || ||||||||||||||| |||| ||||||||||||    
T  8555706 aatgataaactaatatttatgattaatatacttttaattttaagaatattataacaatatagattgaatttgaaaaatt 8555784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 13765869 - 13765947
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  13765869 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 13765947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 36567208 - 36567286
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  36567208 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 36567286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 40357608 - 40357530
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| || |||||||||   || ||||||||||| ||| |||||||||||||||||    
T  40357608 aatgataaactaatacttatgattaatataattttaattttaagaatattataacaacatagattggatttgaaaaatt 40357530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 720
Target Start/End: Original strand, 26051921 - 26052018
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaac 720  Q
    |||| |||| ||| ||||||  ||||| || ||||||||| |  |||| |||||||| |||||||| |||| ||||||||||||||| ||| ||||||    
T  26051921 aatgataaattaacactaatttttaatttatttttaattttgaaagtactataacaacatatattgaatttaaaaaatttacccaaatccctaaaaac 26052018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 701
Target Start/End: Original strand, 31899291 - 31899364
Alignment:
Q  628 taaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| ||||| | ||||||||| ||||||||||||   || ||||||||||||||| |||| ||||||||||||    
T  31899291 taaactaatagttatgattaatatacttttaattttaagaatattataacaatatagattgaatttgaaaaatt 31899364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 633 - 701
Target Start/End: Original strand, 3119792 - 3119860
Alignment:
Q  633 taatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  3119792 taatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 3119860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 633 - 701
Target Start/End: Original strand, 18826166 - 18826234
Alignment:
Q  633 taatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  18826166 taatacttatgattaatatacttttaattttaagaatattataacaacataaattgaatttgaaaaatt 18826234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 703
Target Start/End: Original strand, 38023377 - 38023457
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 703  Q
    |||| |||| |||| || ||||||||| ||||||||||||   || ||||||||||| ||  |||||||||||||||||||    
T  38023377 aatgataaactaattcttatgattaatatacttttaattttaagaatattataacaacattgattggatttgaaaaattta 38023457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 703
Target Start/End: Complemental strand, 44020490 - 44020410
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 703  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||| ||||    
T  44020490 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaagttta 44020410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 32243626 - 32243547
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaat-atatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||||||||| ||| |||| ||||||||||||    
T  32243626 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaatcatagattgaatttgaaaaatt 32243547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 667 - 736
Target Start/End: Complemental strand, 2057465 - 2057395
Alignment:
Q  667 agtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaacgtttc-tccaatacaat 736  Q
    ||||||||| ||| ||| | ||||||||||||| ||||||||||||| |||||| | || |||||||||||    
T  2057465 agtattatagcaacatagaatggatttgaaaaacttacccaaacccctaaaaacttctcatccaatacaat 2057395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 697
Target Start/End: Original strand, 8990893 - 8990967
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaa 697  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||    
T  8990893 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaa 8990967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 31550192 - 31550270
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||| | ||||||||| ||||||||||||   || |||||| |||| ||| |||||||||||||||||    
T  31550192 aatgataaactaatagttatgattaatatacttttaattttaagaatattatgacaacatagattggatttgaaaaatt 31550270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 38294039 - 38293961
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||| ||||||    
T  38294039 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttggaaaatt 38293961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 623 - 703
Target Start/End: Complemental strand, 291 - 211
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 703  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||||||||||||||||||    
T  291 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattggatttgaaaaattta 211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 623 - 703
Target Start/End: Original strand, 2302 - 2382
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 703  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||||||||||||||||||    
T  2302 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattggatttgaaaaattta 2382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 641 - 704
Target Start/End: Complemental strand, 8950458 - 8950394
Alignment:
Q  641 atgattaatgtacttttaattt-agcgagtattataacaatatatattggatttgaaaaatttac 704  Q
    ||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||    
T  8950458 atgattagtgtacttttaattttagcgagtaatataacaatatatattgaatttggaaaatttac 8950394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 34349866 - 34349788
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| |||||||| ||||||||||||    
T  34349866 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatatattgaatttgaaaaatt 34349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 631 - 701
Target Start/End: Original strand, 1941991 - 1942061
Alignment:
Q  631 aataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    ||||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  1941991 aataatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 1942061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 3404504 - 3404582
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  3404504 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 3404582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 34272666 - 34272588
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  34272666 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 34272588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 36102820 - 36102898
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  36102820 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 36102898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 36906338 - 36906260
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||| |||| ||| |||||||||||||||||    
T  36906338 aatgataaactaatacttatgattaatatacttttaattttaagaatattatgacaacatagattggatttgaaaaatt 36906260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 703
Target Start/End: Original strand, 37659461 - 37659541
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaattta 703  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||||| || ||| |||| ||||||||||||||    
T  37659461 aatgataaactaatacttatgattaatatacttttaattttaagaatattataataacatagattgaatttgaaaaattta 37659541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 701
Target Start/End: Original strand, 2474696 - 2474775
Alignment:
Q  622 taatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    ||||| |||| ||||||| ||| ||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  2474696 taatgataaactaatacttatggttaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 2474775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 701
Target Start/End: Complemental strand, 25033532 - 25033453
Alignment:
Q  622 taatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    ||||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| || | ||||||||||||    
T  25033532 taatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatcgaatttgaaaaatt 25033453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 13865022 - 13865100
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||  ||||||||||||    
T  13865022 aatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagattaaatttgaaaaatt 13865100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 634 - 706
Target Start/End: Complemental strand, 24801881 - 24801809
Alignment:
Q  634 aatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttaccc 706  Q
    |||||| |||||||||||| ||||||||| |  ||||| || ||||| |||||||||||||||||||||||||    
T  24801881 aatacttatgattaatgtatttttaattttgtaagtataattacaatgtatattggatttgaaaaatttaccc 24801809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 23095058 - 23095136
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||||||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  23095058 aatgataaaataatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 23095136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 634 - 738
Target Start/End: Complemental strand, 6026311 - 6026208
Alignment:
Q  634 aatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttacccaaacccccaaaaacgtttctccaatac 733  Q
    |||||| |||||||||||| |||||| || |  | ||||||||||||||| ||||||||||||||| | || |||||| || ||||| | | ||||||||    
T  6026311 aatacttatgattaatgtatttttaactttgaaaatattataacaatatagattggatttgaaaaactgactcaaacctcccaaaacctct-tccaatac 6026213  T
Q  734 aattt 738  Q
    |||||    
T  6026212 aattt 6026208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 24735031 - 24734953
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  24735031 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 24734953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 26574325 - 26574403
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  26574325 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 26574403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 34914778 - 34914700
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  34914778 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacataaattgaatttgaaaaatt 34914700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 1029444 - 1029366
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| |||||||  |||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  1029444 aatgataaactaatacttgtgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 1029366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 5825483 - 5825405
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| |||| |||||||    
T  5825483 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttcaaaaatt 5825405  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 26481061 - 26481139
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||||||||  || |||| ||||||||||||    
T  26481061 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacgtagattgaatttgaaaaatt 26481139  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 29241763 - 29241841
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || |||||||| || ||| |||| ||||||||||||    
T  29241763 aatgataaactaatacttatgattaatatacttttaattttaagaatattataagaacatagattgaatttgaaaaatt 29241841  T

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Target: scaffold0026 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 641 - 704
Target Start/End: Original strand, 74648 - 74709
Alignment:
Q  641 atgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatttac 704  Q
    ||||||||| |||||||||||| || ||||||||||||  | ||||||||||||||||||||||    
T  74648 atgattaatatacttttaattttgcaagtattataaca--acatattggatttgaaaaatttac 74709  T

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Target: scaffold0717 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Complemental strand, 1729 - 1651
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| || |||||||||   || ||||||||||| ||| |||||||||||||||||    
T  1729 aatgataaactaatacttatgattaatatatttttaattttaagaatattataacaacatagattggatttgaaaaatt 1651  T

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Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 35385 - 35463
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| |||| ||||||||||||    
T  35385 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagattgaatttgaaaaatt 35463  T

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Target: scaffold0952 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 701
Target Start/End: Original strand, 3600 - 3678
Alignment:
Q  623 aatgttaaaataatactaatgattaatgtacttttaatttagcgagtattataacaatatatattggatttgaaaaatt 701  Q
    |||| |||| ||||||| ||||||||| ||||||||||||   || ||||||||||| ||| ||| ||||| |||||||    
T  3600 aatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatttgattttaaaaatt 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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