View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0896_low_34 (Length: 285)
Name: NF0896_low_34
Description: NF0896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0896_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 26994973 - 26994727
Alignment:
| Q |
1 |
aggacttttcaagtactactgttgattccttgcaagcatgtaatgcagtgcatatatctgtcttctccaggaatttatctgcattttcaaataccaaggg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
26994973 |
aggacttttcaagtactactgttgattccttgcaagcatgtaatgcagtgcatatatctgtcttctccaggaatttctctgcattttcaaataccaaggg |
26994874 |
T |
|
| Q |
101 |
accatactctagaacaatcttcttgcactgcaaacattttgggagagtaacgnnnnnnnccaaatcagtcgatgagaaaaaaggttgattaggaaaatta |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
26994873 |
accatactctagaacaatcttcttgcactgcaaacatttcgggagagtaacgaaaaaaaccaaatcagtcgatgagaaaaaaggttgattaggaaaatta |
26994774 |
T |
|
| Q |
201 |
catttacaaaatttcatacgagtcgatacaattgacaaccatttttc |
247 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
26994773 |
catttacaaaatttcatacgagtcgatacaattgacaaccatttttc |
26994727 |
T |
|
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