View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0896_low_5 (Length: 600)

Name: NF0896_low_5
Description: NF0896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0896_low_5
NF0896_low_5
[»] chr2 (39 HSPs)
chr2 (21-595)||(36464227-36464803)
chr2 (318-466)||(4104893-4105040)
chr2 (319-466)||(28365598-28365744)
chr2 (319-468)||(11175993-11176141)
chr2 (319-468)||(15700833-15700981)
chr2 (247-468)||(18537827-18538046)
chr2 (319-468)||(38716279-38716427)
chr2 (316-468)||(9787645-9787796)
chr2 (247-468)||(30714273-30714492)
chr2 (241-468)||(2986772-2986998)
chr2 (249-468)||(15735150-15735367)
chr2 (240-468)||(25884169-25884396)
chr2 (339-468)||(6763807-6763935)
chr2 (319-468)||(22191132-22191279)
chr2 (340-468)||(9051119-9051245)
chr2 (339-468)||(25298891-25299019)
chr2 (320-468)||(26829160-26829307)
chr2 (319-456)||(17368314-17368450)
chr2 (372-468)||(4587947-4588042)
chr2 (323-468)||(22387141-22387286)
chr2 (335-468)||(331798-331931)
chr2 (345-468)||(2190618-2190741)
chr2 (318-466)||(12350101-12350246)
chr2 (335-468)||(14743403-14743536)
chr2 (316-409)||(21773399-21773491)
chr2 (412-468)||(43301741-43301796)
chr2 (346-460)||(2123468-2123583)
chr2 (243-297)||(9051283-9051337)
chr2 (337-397)||(74981-75041)
chr2 (358-431)||(15147835-15147908)
chr2 (346-397)||(11919803-11919854)
chr2 (247-298)||(22191044-22191095)
chr2 (245-299)||(15735060-15735114)
chr2 (247-297)||(21773331-21773381)
chr2 (248-298)||(26829340-26829390)
chr2 (349-410)||(28319106-28319168)
chr2 (247-305)||(32677814-32677872)
chr2 (316-408)||(43302490-43302579)
chr2 (262-299)||(25884433-25884470)
[»] chr5 (46 HSPs)
chr5 (248-466)||(38476469-38476686)
chr5 (318-468)||(41663592-41663742)
chr5 (252-468)||(40428642-40428857)
chr5 (248-468)||(16900996-16901215)
chr5 (319-468)||(25556945-25557093)
chr5 (248-468)||(245680-245899)
chr5 (319-468)||(18695089-18695237)
chr5 (323-468)||(10293161-10293305)
chr5 (333-468)||(23040035-23040169)
chr5 (316-468)||(34125145-34125297)
chr5 (247-468)||(2373231-2373451)
chr5 (319-468)||(31055384-31055532)
chr5 (339-468)||(37961338-37961467)
chr5 (245-468)||(16307473-16307695)
chr5 (318-468)||(17825566-17825715)
chr5 (248-468)||(26639036-26639255)
chr5 (341-468)||(36641229-36641355)
chr5 (339-468)||(10379368-10379495)
chr5 (247-468)||(38408715-38408933)
chr5 (342-466)||(35302007-35302131)
chr5 (323-468)||(17704661-17704804)
chr5 (341-468)||(19169429-19169555)
chr5 (318-431)||(8673926-8674038)
chr5 (340-468)||(7187275-7187401)
chr5 (341-468)||(23765484-23765608)
chr5 (341-468)||(23815332-23815456)
chr5 (341-468)||(462852-462978)
chr5 (339-468)||(7835796-7835923)
chr5 (386-468)||(20653906-20653987)
chr5 (332-468)||(15885248-15885382)
chr5 (346-397)||(38322357-38322408)
chr5 (422-468)||(8645883-8645929)
chr5 (346-431)||(18739837-18739923)
chr5 (247-364)||(31648173-31648290)
chr5 (411-466)||(23040200-23040256)
chr5 (346-397)||(38545373-38545424)
chr5 (251-307)||(15885409-15885465)
chr5 (346-398)||(20732628-20732680)
chr5 (247-298)||(20654049-20654100)
chr5 (248-299)||(26639291-26639342)
chr5 (247-298)||(38408627-38408678)
chr5 (250-296)||(4800935-4800981)
chr5 (244-297)||(10293341-10293394)
chr5 (249-298)||(31576493-31576542)
chr5 (252-297)||(32466088-32466133)
chr5 (249-297)||(18695004-18695052)
[»] chr1 (43 HSPs)
chr1 (247-468)||(16971936-16972156)
chr1 (249-468)||(2260378-2260597)
chr1 (252-468)||(4455045-4455261)
chr1 (332-468)||(16551726-16551862)
chr1 (248-468)||(24196347-24196566)
chr1 (319-468)||(19077995-19078143)
chr1 (319-468)||(19125885-19126033)
chr1 (340-468)||(29182091-29182218)
chr1 (250-468)||(48471864-48472081)
chr1 (341-468)||(24962039-24962165)
chr1 (246-468)||(46432213-46432434)
chr1 (248-468)||(4059521-4059740)
chr1 (319-468)||(27092922-27093070)
chr1 (316-468)||(9387778-9387933)
chr1 (316-468)||(18606751-18606902)
chr1 (341-468)||(3616885-3617011)
chr1 (320-468)||(22786116-22786260)
chr1 (250-468)||(43706655-43706871)
chr1 (319-468)||(51719192-51719339)
chr1 (319-468)||(2425310-2425458)
chr1 (340-468)||(21185291-21185416)
chr1 (341-468)||(24749884-24750010)
chr1 (319-468)||(2657583-2657730)
chr1 (341-468)||(29676165-29676291)
chr1 (339-468)||(47685187-47685315)
chr1 (332-420)||(9554284-9554372)
chr1 (320-466)||(31084683-31084828)
chr1 (382-468)||(10684878-10684965)
chr1 (406-468)||(21148064-21148126)
chr1 (320-468)||(28920727-28920869)
chr1 (252-382)||(21148118-21148248)
chr1 (243-298)||(24196255-24196310)
chr1 (337-468)||(26605365-26605493)
chr1 (348-397)||(16858487-16858536)
chr1 (247-298)||(28920906-28920957)
chr1 (358-431)||(18106817-18106891)
chr1 (247-297)||(18606939-18606989)
chr1 (248-298)||(24750024-24750074)
chr1 (335-407)||(6285261-6285334)
chr1 (248-297)||(14601748-14601797)
chr1 (251-299)||(28552307-28552355)
chr1 (250-298)||(50334719-50334767)
chr1 (247-307)||(51719366-51719426)
[»] chr4 (53 HSPs)
chr4 (249-468)||(35475375-35475592)
chr4 (247-468)||(43793629-43793849)
chr4 (328-468)||(51291248-51291388)
chr4 (332-468)||(4098742-4098878)
chr4 (319-468)||(27018300-27018448)
chr4 (341-468)||(13397767-13397893)
chr4 (248-467)||(24626221-24626438)
chr4 (319-468)||(13826489-13826637)
chr4 (339-468)||(15058908-15059036)
chr4 (247-468)||(4433181-4433401)
chr4 (319-468)||(19232413-19232562)
chr4 (319-468)||(25011821-25011969)
chr4 (340-468)||(5304438-5304565)
chr4 (319-466)||(4357340-4357486)
chr4 (318-468)||(6209308-6209459)
chr4 (341-468)||(41877120-41877244)
chr4 (246-468)||(20919332-20919550)
chr4 (319-468)||(45633523-45633670)
chr4 (336-464)||(2715804-2715930)
chr4 (320-431)||(36729159-36729270)
chr4 (319-468)||(1588484-1588630)
chr4 (344-461)||(52838321-52838436)
chr4 (349-466)||(23362519-23362635)
chr4 (251-463)||(41034727-41034936)
chr4 (341-446)||(25618720-25618824)
chr4 (372-468)||(9195787-9195881)
chr4 (332-459)||(15795412-15795538)
chr4 (353-468)||(55780473-55780586)
chr4 (353-468)||(55844653-55844766)
chr4 (332-468)||(15734485-15734619)
chr4 (339-468)||(6789048-6789176)
chr4 (348-468)||(2931407-2931525)
chr4 (249-464)||(9397281-9397493)
chr4 (249-379)||(13394536-13394666)
chr4 (339-397)||(47869811-47869868)
chr4 (319-431)||(14804441-14804553)
chr4 (422-468)||(48158682-48158728)
chr4 (346-466)||(16291777-16291898)
chr4 (349-397)||(33978888-33978936)
chr4 (340-407)||(12101217-12101284)
chr4 (246-296)||(1588669-1588719)
chr4 (233-298)||(18259366-18259431)
chr4 (249-298)||(25011735-25011784)
chr4 (349-431)||(7540189-7540272)
chr4 (249-296)||(17138540-17138587)
chr4 (346-397)||(32335981-32336032)
chr4 (249-298)||(4098911-4098960)
chr4 (249-298)||(4433437-4433485)
chr4 (245-298)||(24626471-24626524)
chr4 (249-301)||(2931321-2931373)
chr4 (247-307)||(35475289-35475349)
chr4 (247-307)||(41877270-41877330)
chr4 (249-297)||(52838231-52838279)
[»] scaffold0002 (2 HSPs)
scaffold0002 (250-468)||(455112-455331)
scaffold0002 (376-468)||(455016-455108)
[»] chr8 (35 HSPs)
chr8 (251-468)||(3208066-3208281)
chr8 (244-468)||(19391383-19391605)
chr8 (340-468)||(38630141-38630268)
chr8 (323-468)||(18252960-18253104)
chr8 (242-468)||(8802393-8802617)
chr8 (328-468)||(41688188-41688329)
chr8 (248-468)||(19924351-19924570)
chr8 (245-468)||(4807596-4807818)
chr8 (320-466)||(22452244-22452389)
chr8 (340-468)||(4518958-4519085)
chr8 (248-468)||(21666273-21666492)
chr8 (317-468)||(1824691-1824840)
chr8 (317-468)||(1859136-1859285)
chr8 (341-468)||(5192363-5192489)
chr8 (247-468)||(33895460-33895679)
chr8 (333-468)||(4423114-4423249)
chr8 (247-468)||(18881502-18881722)
chr8 (341-468)||(17648329-17648455)
chr8 (319-468)||(12723331-12723479)
chr8 (339-468)||(44147057-44147184)
chr8 (341-468)||(30784357-30784482)
chr8 (255-468)||(15869343-15869555)
chr8 (339-468)||(32400412-32400540)
chr8 (318-468)||(7117183-7117333)
chr8 (245-417)||(23565225-23565397)
chr8 (318-468)||(31268365-31268514)
chr8 (349-451)||(41385590-41385692)
chr8 (323-396)||(17813010-17813083)
chr8 (422-468)||(21929975-21930021)
chr8 (378-427)||(17857061-17857110)
chr8 (346-431)||(8137635-8137721)
chr8 (248-307)||(4519113-4519172)
chr8 (339-374)||(21929937-21929972)
chr8 (249-307)||(33895375-33895433)
chr8 (349-397)||(132538-132586)
[»] chr6 (42 HSPs)
chr6 (318-468)||(26240041-26240192)
chr6 (262-450)||(12291430-12291618)
chr6 (269-465)||(9241742-9241934)
chr6 (248-468)||(18791443-18791663)
chr6 (319-468)||(24051094-24051242)
chr6 (247-468)||(35102489-35102709)
chr6 (244-468)||(4597400-4597623)
chr6 (341-468)||(25819770-25819896)
chr6 (318-460)||(32451820-32451961)
chr6 (339-468)||(24603447-24603575)
chr6 (319-468)||(34834011-34834159)
chr6 (318-468)||(22968225-22968372)
chr6 (318-468)||(23820021-23820168)
chr6 (339-468)||(26710397-26710525)
chr6 (319-468)||(31210880-31211028)
chr6 (332-468)||(16415415-16415549)
chr6 (318-468)||(3118765-3118914)
chr6 (374-468)||(4013791-4013885)
chr6 (359-468)||(8412844-8412952)
chr6 (323-468)||(22269493-22269636)
chr6 (316-449)||(34528252-34528385)
chr6 (253-468)||(14572182-14572396)
chr6 (319-419)||(20863798-20863898)
chr6 (340-468)||(15298571-15298697)
chr6 (246-463)||(18749094-18749309)
chr6 (331-468)||(19282295-19282429)
chr6 (333-419)||(23124804-23124890)
chr6 (318-468)||(4370984-4371127)
chr6 (318-468)||(12427317-12427468)
chr6 (318-466)||(2636865-2637013)
chr6 (336-468)||(14195644-14195776)
chr6 (249-468)||(2058834-2059040)
chr6 (375-466)||(8149036-8149126)
chr6 (332-465)||(24615776-24615908)
chr6 (250-298)||(4013920-4013968)
chr6 (422-468)||(18749300-18749346)
chr6 (390-468)||(32682419-32682496)
chr6 (247-298)||(18791356-18791407)
chr6 (248-298)||(31210793-31210843)
chr6 (340-464)||(11661010-11661135)
chr6 (249-298)||(22269410-22269459)
chr6 (249-298)||(25819939-25819988)
[»] chr3 (58 HSPs)
chr3 (247-468)||(26628023-26628243)
chr3 (250-468)||(40836181-40836397)
chr3 (319-468)||(48907362-48907510)
chr3 (319-467)||(3328883-3329030)
chr3 (248-468)||(20001795-20002012)
chr3 (247-467)||(34878527-34878746)
chr3 (321-468)||(23428691-23428837)
chr3 (339-468)||(8542696-8542824)
chr3 (319-468)||(28173799-28173947)
chr3 (319-468)||(33279655-33279803)
chr3 (251-468)||(32315005-32315219)
chr3 (249-468)||(28154882-28155100)
chr3 (319-468)||(4522040-4522188)
chr3 (341-550)||(3780879-3781090)
chr3 (316-468)||(22416419-22416571)
chr3 (247-466)||(13080982-13081200)
chr3 (261-468)||(23320447-23320652)
chr3 (341-468)||(30155237-30155363)
chr3 (247-468)||(1743335-1743555)
chr3 (319-468)||(25022733-25022881)
chr3 (339-468)||(27852842-27852969)
chr3 (249-468)||(8338940-8339158)
chr3 (244-468)||(25179664-25179884)
chr3 (319-466)||(36311238-36311385)
chr3 (319-468)||(46673117-46673265)
chr3 (319-468)||(10743494-10743641)
chr3 (340-466)||(25336443-25336569)
chr3 (248-466)||(26633360-26633574)
chr3 (319-468)||(26126976-26127124)
chr3 (319-468)||(26177026-26177174)
chr3 (247-468)||(22447738-22447962)
chr3 (341-468)||(22500687-22500813)
chr3 (341-431)||(3821004-3821094)
chr3 (339-417)||(6927606-6927684)
chr3 (319-468)||(48860788-48860937)
chr3 (332-468)||(31039060-31039195)
chr3 (381-468)||(4775936-4776023)
chr3 (339-468)||(35201085-35201212)
chr3 (319-468)||(33105027-33105175)
chr3 (319-417)||(32960713-32960810)
chr3 (340-398)||(43668583-43668641)
chr3 (319-468)||(46387651-46387792)
chr3 (247-298)||(36311150-36311201)
chr3 (321-407)||(20626794-20626880)
chr3 (346-431)||(32463516-32463602)
chr3 (345-468)||(9496312-9496435)
chr3 (248-298)||(10743408-10743458)
chr3 (411-466)||(49657942-49657996)
chr3 (247-297)||(40836434-40836484)
chr3 (246-298)||(25179575-25179627)
chr3 (346-397)||(48743228-48743279)
chr3 (317-392)||(49657861-49657936)
chr3 (247-297)||(33279840-33279890)
chr3 (490-550)||(3820913-3820974)
chr3 (249-298)||(20626751-20626800)
chr3 (495-548)||(26633359-26633412)
chr3 (401-466)||(34296531-34296596)
chr3 (392-468)||(18388842-18388918)
[»] scaffold0014 (1 HSPs)
scaffold0014 (250-466)||(112214-112429)
[»] chr7 (77 HSPs)
chr7 (316-468)||(24464661-24464813)
chr7 (240-463)||(15681720-15681943)
chr7 (248-468)||(39182021-39182238)
chr7 (320-467)||(4193637-4193783)
chr7 (248-468)||(25002793-25003010)
chr7 (318-464)||(3403120-3403266)
chr7 (339-468)||(20636705-20636833)
chr7 (319-468)||(21224422-21224570)
chr7 (318-446)||(9822169-9822296)
chr7 (318-446)||(10724094-10724221)
chr7 (316-468)||(36746570-36746721)
chr7 (270-431)||(6650632-6650793)
chr7 (339-468)||(24597605-24597733)
chr7 (319-468)||(26126340-26126488)
chr7 (339-468)||(27869285-27869413)
chr7 (349-468)||(35337622-35337740)
chr7 (319-468)||(31493996-31494144)
chr7 (319-468)||(41452319-41452467)
chr7 (319-468)||(48176033-48176180)
chr7 (248-468)||(42271418-42271637)
chr7 (341-468)||(2331099-2331225)
chr7 (345-468)||(3562529-3562651)
chr7 (319-457)||(39440189-39440328)
chr7 (247-434)||(42303266-42303452)
chr7 (247-468)||(26385347-26385567)
chr7 (339-468)||(33237503-33237632)
chr7 (248-468)||(11843177-11843395)
chr7 (316-431)||(5087118-5087233)
chr7 (369-468)||(5111525-5111623)
chr7 (323-468)||(14624689-14624832)
chr7 (319-468)||(18754336-18754484)
chr7 (319-468)||(19195283-19195431)
chr7 (319-435)||(7365341-7365457)
chr7 (369-468)||(4571463-4571562)
chr7 (319-468)||(10023855-10024002)
chr7 (316-468)||(15093818-15093967)
chr7 (316-468)||(17305850-17306002)
chr7 (349-468)||(43251350-43251470)
chr7 (319-468)||(10655416-10655563)
chr7 (339-468)||(8526882-8527009)
chr7 (319-468)||(13577856-13578003)
chr7 (335-468)||(23439679-23439812)
chr7 (335-468)||(23461107-23461240)
chr7 (245-462)||(24448041-24448256)
chr7 (332-468)||(44077953-44078089)
chr7 (339-461)||(19919693-19919814)
chr7 (319-468)||(19493405-19493552)
chr7 (382-468)||(9157183-9157268)
chr7 (335-468)||(23473075-23473208)
chr7 (381-468)||(20638577-20638663)
chr7 (381-463)||(6798014-6798095)
chr7 (261-419)||(5348161-5348315)
chr7 (332-468)||(21225632-21225765)
chr7 (338-468)||(3148009-3148138)
chr7 (411-468)||(15681683-15681740)
chr7 (353-466)||(47113202-47113315)
chr7 (422-468)||(6798086-6798132)
chr7 (346-398)||(38722900-38722952)
chr7 (346-459)||(43516977-43517091)
chr7 (335-388)||(1921040-1921093)
chr7 (237-298)||(43517167-43517228)
chr7 (248-300)||(2331271-2331323)
chr7 (349-397)||(9154398-9154446)
chr7 (248-307)||(6650543-6650602)
chr7 (243-298)||(23658768-23658823)
chr7 (382-417)||(29051754-29051789)
chr7 (346-397)||(46267343-46267394)
chr7 (243-298)||(48176217-48176272)
chr7 (248-298)||(14624607-14624657)
chr7 (250-307)||(2331015-2331072)
chr7 (249-298)||(17305764-17305813)
chr7 (246-299)||(18754520-18754573)
chr7 (247-304)||(21225576-21225633)
chr7 (500-549)||(21225803-21225852)
chr7 (249-297)||(24597771-24597819)
chr7 (247-299)||(26385261-26385313)
chr7 (414-466)||(39296589-39296641)
[»] scaffold0607 (2 HSPs)
scaffold0607 (319-468)||(2119-2267)
scaffold0607 (248-298)||(2047-2097)
[»] scaffold0025 (2 HSPs)
scaffold0025 (319-468)||(19369-19516)
scaffold0025 (319-468)||(61900-62050)
[»] scaffold0291 (1 HSPs)
scaffold0291 (247-468)||(10007-10229)
[»] scaffold0087 (2 HSPs)
scaffold0087 (319-468)||(25034-25182)
scaffold0087 (248-307)||(25210-25269)
[»] scaffold0062 (2 HSPs)
scaffold0062 (319-468)||(49745-49893)
scaffold0062 (319-468)||(62284-62432)
[»] scaffold0267 (1 HSPs)
scaffold0267 (339-468)||(3658-3786)
[»] scaffold0179 (1 HSPs)
scaffold0179 (339-468)||(5740-5867)
[»] scaffold0174 (1 HSPs)
scaffold0174 (319-468)||(29802-29950)
[»] scaffold0406 (1 HSPs)
scaffold0406 (319-518)||(2026-2225)
[»] scaffold0001 (2 HSPs)
scaffold0001 (341-468)||(142039-142165)
scaffold0001 (249-298)||(141945-141994)
[»] scaffold0419 (1 HSPs)
scaffold0419 (249-468)||(2961-3178)
[»] scaffold1875 (1 HSPs)
scaffold1875 (247-468)||(754-975)
[»] scaffold0060 (1 HSPs)
scaffold0060 (319-468)||(66260-66408)
[»] scaffold0024 (1 HSPs)
scaffold0024 (340-468)||(43915-44042)
[»] scaffold0150 (1 HSPs)
scaffold0150 (339-468)||(5917-6045)
[»] scaffold0171 (1 HSPs)
scaffold0171 (318-420)||(9165-9268)
[»] scaffold1202 (1 HSPs)
scaffold1202 (377-468)||(1902-1992)
[»] scaffold0007 (1 HSPs)
scaffold0007 (341-435)||(250610-250703)
[»] scaffold0103 (1 HSPs)
scaffold0103 (318-466)||(2996-3144)
[»] scaffold0474 (1 HSPs)
scaffold0474 (339-399)||(8070-8130)
[»] scaffold0005 (1 HSPs)
scaffold0005 (319-431)||(35174-35286)
[»] scaffold0064 (1 HSPs)
scaffold0064 (346-431)||(54492-54576)
[»] scaffold0683 (1 HSPs)
scaffold0683 (319-389)||(5191-5261)
[»] scaffold0010 (1 HSPs)
scaffold0010 (349-419)||(128451-128520)


Alignment Details
Target: chr2 (Bit Score: 359; Significance: 0; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 21 - 595
Target Start/End: Complemental strand, 36464803 - 36464227
Alignment:
Q  21 aaaaaacaactaactaaaccaatgaatgattgtaagaacaaatattaaataaatattcttacggatgatttgtatatctgtatatctttagattagatat 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36464803 aaaaaacaactaactaaaccaatgaatgattgtaagaacaaatattaaataaatattcttatggatgatttgtatatctgtatatctttagattagatat 36464704  T
Q  121 cccaattttatgtaaggatttcataagttgtctcagacagaaatctaatatcaagtattgtatgagggggttgcctagatgtaaattgaatcatattttt 220  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464703 cccaattttatgtaaggatttcataagttgtctcagacacaaatctaatatcaagtattgtatgagggggttgcctagatgtaaattgaatcatattttt 36464604  T
Q  221 tcgggtcaaaccttattagtttaatataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgaca 320  Q
     ||||||||||||||||||||||||||||| |||||||| ||||||| | ||||||||  ||||||||||||||||| | |||||||        |||||    
T  36464603 ccgggtcaaaccttattagtttaatataggttaaactgcacttttcgcctcctaagtttcaaaatgttgcgattttgatcccttatt-aaaaaaatgaca 36464505  T
Q  321 attttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagat 420  Q
    ||||||  ||||||||| |||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  36464504 attttggtccatttcgtcccaaaattgctgagaagatgtcacgtgtctcaaaaaaggggccat-atcgcaactttttgagaagataaggagtcaaaagat 36464406  T
Q  421 tatatttcccttatgttagggggtcaaaagaacatatttccctaaaca----gtcacttttaccannnnnnnaaatatgggtcaaaatcgcaacatttt- 515  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    ||||||||| |||       ||||| |||||||||||||||||||||     
T  36464405 tatatttcccttatgttagggggtcaaaagatcatatttccctaaacatggggtcacttttgcca-ttttttaaataggggtcaaaatcgcaacatttta 36464307  T
Q  516 aaacctaaggggcagaaaatgcaatttagcctttaatataatataatttannnnnnncgtatgtaagtaatgttaatttt 595  Q
    |||| ||||||||  ||||| || ||||| ||||||||||||||||||||       | |||| ||||||||||||||||    
T  36464306 aaacttaaggggcgaaaaatacagtttagtctttaatataatataatttatttttttcatatgaaagtaatgttaatttt 36464227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 318 - 466
Target Start/End: Original strand, 4104893 - 4105040
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||  || |||||| |||||||    
T  4104893 acaattttgacccatttcgtcccaaaattgctgagaagacgccacgtgttcctaaaaaggggtcataatcgcaactttttgtaaatataaggtgtcaaaa 4104992  T
Q  418 gattatatttcccttatgttagggggtcaaaagaacatatttccctaaa 466  Q
    ||  ||||| ||||||||||| | ||||||||||| |||||||||||||    
T  4104993 gagcatattccccttatgtta-gaggtcaaaagaatatatttccctaaa 4105040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 319 - 466
Target Start/End: Complemental strand, 28365744 - 28365598
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||||| ||||||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||||||||||||| || |||||    
T  28365744 caattttgccccctttcgtcccaaaattgctgagaagacgccatgcgtcccaaaaaaagggtcataatcgcaactttttgagaagataaggggttaaaag 28365645  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaa 466  Q
    || |||||||||| |||||| ||||||||| || ||||||||||||||    
T  28365644 atcatatttccctcatgtta-ggggtcaaacgagcatatttccctaaa 28365598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 11176141 - 11175993
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    ||||||||| || |||| | ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||  ||||||||| |||||||     
T  11176141 caattttgatccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaa- 11176043  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  11176042 agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaaca 11175993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 15700981 - 15700833
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||| |||||| |||||||||| || |||||||||||||||||||||||||||  ||||||||| |||||||     
T  15700981 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 15700883  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||||||||||||||||||||||||||| |||||||||| |||||    
T  15700882 aacatatttcccttatgttagggggtcaaaagagcatatttcccgaaaca 15700833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 247 - 468
Target Start/End: Original strand, 18537827 - 18538046
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||| |||||||| || ||||         | |||||||| ||| |||| | | ||||||    
T  18537827 taggctaaactgcacttttcgtcccctatgttttaaaatgttgcaattttggtcccctattaaaaaaatag-caattttggcccctttcatccaaaaatt 18537925  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    ||||||||||||||||||||| ||||||||||| |||||| |||||||||||  ||||||||| ||||||| |  |||||||||| |||||| | |||||    
T  18537926 gctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa-agcatatttccctaatgttatgaggtca 18538024  T
Q  447 aaagaacatatttccctaaaca 468  Q
    ||| | ||||||||||||||||    
T  18538025 aaaaagcatatttccctaaaca 18538046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 38716427 - 38716279
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | | ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||| |||||||     
T  38716427 caattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa- 38716329  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  38716328 agcatatttctcttatgttaggaggtcaaaagagcatatttccctaaaca 38716279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 316 - 468
Target Start/End: Complemental strand, 9787796 - 9787645
Alignment:
Q  316 tgacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaa 415  Q
    ||||||||||| ||| |||| | | ||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||  ||||||||| |||||    
T  9787796 tgacaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgtaactttttgtaaagataaggggtcaa 9787697  T
Q  416 aagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    || |  ||||||||||||||||||  |||||||||| ||||||||||||||||    
T  9787696 aa-agcatatttcccttatgttagcaggtcaaaagagcatatttccctaaaca 9787645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 247 - 468
Target Start/End: Original strand, 30714273 - 30714492
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||| ||| ||||||| |||||| ||| |||||||||||||||||||  || ||||        || |||||||| ||| |||| | ||||||||    
T  30714273 taggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttggccccctattaaaaaaa-tggcaattttggcccctttcatcccaaaatt 30714371  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    |||||||||||||||| |||| ||||||||||| ||||||| ||||||||||  ||||||| | ||||||| |  ||||||||||||||||||| |||||    
T  30714372 gctgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaaagataacgggtcaaaa-agcatatttcccttatgttaggaggtca 30714470  T
Q  447 aaagaacatatttccctaaaca 468  Q
    ||||| |||||||||| |||||    
T  30714471 aaagagcatatttcccgaaaca 30714492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 241 - 468
Target Start/End: Complemental strand, 2986998 - 2986772
Alignment:
Q  241 ttaatataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttcc 340  Q
    ||||||||||||||| ||| ||||||   | ||| |||  ||||||||||||||||||  || ||||        || |||||||| |||  ||| | ||    
T  2986998 ttaatataggctaaagtgcacttttcactctctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatccc 2986899  T
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||||||||||||||||| |||||  |||||||||| ||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||||    
T  2986898 aaaattgctgagaagacgccatgtgtccaaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttagg 2986800  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||||||||||||    
T  2986799 aggtcaaaagagcatatttccctaaaca 2986772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 249 - 468
Target Start/End: Complemental strand, 15735367 - 15735150
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgc 348  Q
    ||||||||| | ||||||| |||||| ||| ||||||||||| |||||||| || | ||        || |||||||| ||| |||| | |||||||||     
T  15735367 ggctaaactccacttttcgccccctatgttttaaaatgttgcaattttggtcccct-tttaaaaaaatggcaattttggcccctttcatcccaaaattgt 15735269  T
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaa 448  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||| | |||||||    
T  15735268 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaata-catatttcccttatgttacgaggtcaaa 15735170  T
Q  449 agaacatatttccctaaaca 468  Q
    ||| |||||||||| |||||    
T  15735169 agagcatatttcccaaaaca 15735150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 240 - 468
Target Start/End: Original strand, 25884169 - 25884396
Alignment:
Q  240 tttaatataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttc 339  Q
    |||||| ||||||||||||| | ||||| |||||||||| |||||||||||||||||||  || ||||        ||  ||||||| ||| |||||| |    
T  25884169 tttaatttaggctaaactgcacatttcgccccctaagttttaaaatgttgcgattttggccccctattaaaaaaa-tggtaattttggcccttttcgtcc 25884267  T
Q  340 caaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttag 439  Q
    ||||||||||||||| || | ||  ||| ||||| |||||  |||||||||||||||||||||||||||| || |||| || ||||||||||||||||||    
T  25884268 caaaattgctgagaaaacactacacgtcccaaaacaggggcaataatcgcaactttttgagaagataaggggttaaaatatcatatttcccttatgttag 25884367  T
Q  440 ggggtcaaaagaacatatttccctaaaca 468  Q
    ||| | |||| |||||||||| |||||||    
T  25884368 gggattaaaataacatatttctctaaaca 25884396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 6763807 - 6763935
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||||||||||||||||||||||| ||||||||||| | ||||||| ||||||||  ||||||||| ||||||| |  |||||| ||||||||||    
T  6763807 ccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccgtaatcgctactttttgtaaagataaggggtcaaaa-agcatattttccttatgtta 6763905  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    || |||||||||| ||||||||||||||||    
T  6763906 ggaggtcaaaagagcatatttccctaaaca 6763935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 22191279 - 22191132
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||||||||| ||||||||||| ||||||| |||||||||||| |||||||||  ||||||||| ||||||||    
T  22191279 caattttggcccctttcatcccaaaattgctgagaaggcgccacgtgtcccaaaaaa-gggtcataatcgtaactttttgtaaagataaggggtcaaaag 22191181  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
       |||||||||||||||||||  ||||||||| ||||||||||||||||    
T  22191180 -gcatatttcccttatgttaggaagtcaaaagagcatatttccctaaaca 22191132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 9051119 - 9051245
Alignment:
Q  340 caaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttag 439  Q
    ||||||||||||||||||||| |||||| ||||||||||  ||||||||||||||||||  ||||||||  ||||||| |  ||||||||||||||||||    
T  9051119 caaaattgctgagaagacgccccgtgtcccaaaaaagggc-cataatcgcaactttttgtaaagataagaggtcaaaa-agcatatttcccttatgttag 9051216  T
Q  440 ggggtcaaaagaacatatttccctaaaca 468  Q
    | |||||||||| ||||||||||||||||    
T  9051217 gaggtcaaaagagcatatttccctaaaca 9051245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 25298891 - 25299019
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||| |||||||| |||||||||| ||||||||||| ||||||||||||||||||  |||||||||  |||||| |  |||||||| ||||||||    
T  25298891 ccaaaattgttgagaagatgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagggatcaaaa-aacatatttcctttatgtta 25298989  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
     | |||||||||| ||||||||||||||||    
T  25298990 agaggtcaaaagagcatatttccctaaaca 25299019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 320 - 468
Target Start/End: Original strand, 26829160 - 26829307
Alignment:
Q  320 aattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaa-ggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    ||||||| ||| ||||||  |||||||| ||||||||||| |||| || ||||||| |||| ||||||| ||||||||||||| ||||||| ||||||||    
T  26829160 aattttggcccctttcgtctcaaaattgttgagaagacgctacgt-tcccaaaaaagggggccataatcacaactttttgagatgataaggggtcaaaag 26829258  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    || ||||||||||||||||| |||||| ||||| ||||||||| ||||||    
T  26829259 atcatatttcccttatgtta-ggggtccaaagagcatatttccttaaaca 26829307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 456
Target Start/End: Complemental strand, 17368450 - 17368314
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | | |||| || ||||||||||||||||||| ||||||||||| |||||| |||||||||||  ||||||||| |||||||     
T  17368450 caattttggcccctttcatccaaaaaatgttgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa- 17368352  T
Q  419 attatatttcccttatgttagggggtcaaaagaacata 456  Q
    |  ||||||||||||||||||| |||||||||| ||||    
T  17368351 agcatatttcccttatgttaggaggtcaaaagagcata 17368314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 372 - 468
Target Start/End: Complemental strand, 4588042 - 4587947
Alignment:
Q  372 aaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||||||||||||||||||||  ||||||||| || |||| |  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  4588042 aaaaggggtcataatcgcaactttttgtaaagataaggggttaaaaaac-atatttcccttatgttagggggtcaaaagagcatatttccctaaaca 4587947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 323 - 468
Target Start/End: Original strand, 22387141 - 22387286
Alignment:
Q  323 tttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaa-ggggtcataatcgcaactttttgagaagataaggagtcaaaagatt 421  Q
    |||||||| ||||||  ||||||||||||||||||||||| |||| ||||||| |||| ||||||| ||||| ||||   |||||||| ||||||| |      
T  22387141 tttgacccctttcgtctcaaaattgctgagaagacgccacttgtcccaaaaaagggggccataatcacaactctttgtatagataaggggtcaaaa-aac 22387239  T
Q  422 atatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||| | |||||||||||||||||||| |||||||| |||||||    
T  22387240 atatttctcatatgttagggggtcaaaagagcatatttcactaaaca 22387286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 468
Target Start/End: Complemental strand, 331931 - 331798
Alignment:
Q  335 cgttccaaaattgctgagaagacgccacgtgtctcaaaaa-aggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccctta 433  Q
    |||| |||| |||| |||||| |||||| ||| ||||||| ||||||||||||||||||||||||  ||||||| |  |||||| |  ||||||||||||    
T  331931 cgttgcaaagttgccgagaagccgccacatgt-tcaaaaataggggtcataatcgcaactttttgcaaagataatggatcaaaaaagcatatttccctta 331833  T
Q  434 tgttagggggtcaaaagaacatatttccctaaaca 468  Q
     ||||| ||||||||||| ||||||||||||||||    
T  331832 agttagagggtcaaaagagcatatttccctaaaca 331798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 345 - 468
Target Start/End: Complemental strand, 2190741 - 2190618
Alignment:
Q  345 ttgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggt 444  Q
    ||||||||||| ||| || |||| ||||| | ||||||||| ||||||||||||  ||||||||| | |||| ||  |||||| ||||| ||||| ||||    
T  2190741 ttgctgagaagccgcaacatgtcccaaaatatgggtcataaccgcaactttttgtaaagataaggggccaaacgagcatattttccttaagttagagggt 2190642  T
Q  445 caaaagaacatatttccctaaaca 468  Q
    ||||||| ||||||||||||||||    
T  2190641 caaaagagcatatttccctaaaca 2190618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 466
Target Start/End: Complemental strand, 12350246 - 12350101
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcat--aatcgcaactttttgagaagataaggagtcaa 415  Q
    ||||| || |||| ||||||  ||||||| |||| |||||||||| |||  |||||||| | ||||  ||||||||||||||||||||||||    ||||    
T  12350246 acaatctttacccctttcgtctcaaaattactgacaagacgccacatgttccaaaaaagagatcatttaatcgcaactttttgagaagataa----tcaa 12350151  T
Q  416 aagattatatttcccttatgttagggggtcaaaagaacatatttccctaaa 466  Q
    || || ||||||||||||  ||| |||||||||||| ||||||||||||||    
T  12350150 aatatcatatttcccttacctta-ggggtcaaaagagcatatttccctaaa 12350101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 335 - 468
Target Start/End: Complemental strand, 14743536 - 14743403
Alignment:
Q  335 cgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttat 434  Q
    |||| |||| ||||||||||| | ||||||||| ||||| |||||  |||||||||| ||||||  || |||||| | |||||||  ||||||| ||||     
T  14743536 cgttgcaaagttgctgagaagccaccacgtgtcccaaaataggggctataatcgcaaatttttgcaaaaataaggggccaaaagagcatatttctcttaa 14743437  T
Q  435 gttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||  ||||||||||| |||||||||| |||||    
T  14743436 gttatagggtcaaaagatcatatttcccaaaaca 14743403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 409
Target Start/End: Original strand, 21773399 - 21773491
Alignment:
Q  316 tgacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataagg 409  Q
    ||||||||||| ||| |||||| ||||||||| |||||||| |||||||||| || || |||||  | |||||||||||||| |||||||||||    
T  21773399 tgacaattttggccc-tttcgtcccaaaattgttgagaagaagccacgtgtcccagaacaggggctaaaatcgcaacttttttagaagataagg 21773491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 468
Target Start/End: Complemental strand, 43301796 - 43301741
Alignment:
Q  412 tcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||| |||||||||||    
T  43301796 tcaaaagatcatatttcccttaagttagggg-tcaaaagaacatacttccctaaaca 43301741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 346 - 460
Target Start/End: Complemental strand, 2123583 - 2123468
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggg-gtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggt 444  Q
    ||||||||||||||||| |||| ||||| |||| |||| ||| |||||||||||  ||||||| | |||||||||   ||||||||| | | ||| || |    
T  2123583 tgctgagaagacgccacatgtcccaaaacagggtgtcaaaattgcaactttttgtaaagataaagggtcaaaagaacttatttccctaaagatagaggat 2123484  T
Q  445 caaaagaacatatttc 460  Q
    ||||||| ||||||||    
T  2123483 caaaagagcatatttc 2123468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 9051337 - 9051283
Alignment:
Q  243 aatataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttg 297  Q
    ||||||||||||||| | ||||||| || ||||||| ||||||||||||||||||    
T  9051337 aatataggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttg 9051283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 75041 - 74981
Alignment:
Q  337 ttccaaaat-tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaacttttt 397  Q
    ||||||||| || |||||||  ||||||||||||||||| ||||||||||||||||||||||    
T  75041 ttccaaaatatgttgagaagctgccacgtgtctcaaaaa-ggggtcataatcgcaacttttt 74981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 358 - 431
Target Start/End: Complemental strand, 15147908 - 15147835
Alignment:
Q  358 gccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccct 431  Q
    |||||||||| |||||||||||  |||||||||||||||||  ||||||| |  ||||||||  ||||||||||    
T  15147908 gccacgtgtcccaaaaaaggggctataatcgcaactttttgttaagataatggatcaaaagagcatatttccct 15147835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 397
Target Start/End: Complemental strand, 11919854 - 11919803
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaacttttt 397  Q
    |||||||||| ||||||||||| |||||||| | ||| ||||||||||||||    
T  11919854 tgctgagaagccgccacgtgtcccaaaaaagtgatcaaaatcgcaacttttt 11919803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 22191044 - 22191095
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||||| | |||||||||||||| ||| ||||||||||| |||||||    
T  22191044 taggctaaactacacttttcgtcccctatgttttaaaatgttgcaattttgg 22191095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 15735060 - 15735114
Alignment:
Q  245 tataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggt 299  Q
    ||||||||||||| | ||||||| || |||||||  |||||||||||||||||||    
T  15735060 tataggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggt 15735114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 21773331 - 21773381
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttg 297  Q
    ||||||||||||| ||||  | |||||||||| ||||||||||||||||||    
T  21773331 taggctaaactgcactttctgccccctaagttttaaaatgttgcgattttg 21773381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 26829390 - 26829340
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    |||||||| ||| |||||| |||| |||||| |||||||||||||||||||    
T  26829390 aggctaaagtgcacttttcatcccttaagttttaaaatgttgcgattttgg 26829340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 28319106 - 28319168
Alignment:
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaact-ttttgagaagataagga 410  Q
    ||||||| || ||||||| |||||||| ||||||||||||||||| |||||  ||||||||||    
T  28319106 tgagaagccgtcacgtgtatcaaaaaatgggtcataatcgcaactattttgtaaagataagga 28319168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 305
Target Start/End: Original strand, 32677814 - 32677872
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttcctta 305  Q
    ||||||||| |||  |||||| | |||||||| ||||||||||||||||||| ||||||    
T  32677814 taggctaaagtgcatttttcgcctcctaagttttaaaatgttgcgattttggctcctta 32677872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 408
Target Start/End: Complemental strand, 43302579 - 43302490
Alignment:
Q  316 tgacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataag 408  Q
    ||||||||||||| | || ||| | ||||||  |||||||| |||||||||    ||||| ||||| ||||| ||||||||||||||||||||    
T  43302579 tgacaattttgacactttccgtcctaaaattattgagaagatgccacgtgtt---aaaaaagggtcgtaatcacaactttttgagaagataag 43302490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 299
Target Start/End: Complemental strand, 25884470 - 25884433
Alignment:
Q  262 ttttcgtcccctaagttataaaatgttgcgattttggt 299  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  25884470 ttttcgtcccctaagttttaaaatgttgcaattttggt 25884433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 7e-63; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 248 - 466
Target Start/End: Original strand, 38476469 - 38476686
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||| ||| ||||||| ||||||||||| |||| ||||||||||| |  || ||||        ||||||||||| |||||||||| |||||||||    
T  38476469 aggctaaaatgcacttttcgacccctaagttacaaaaagttgcgattttagccccctatttaataaaatgacaattttggcccatttcgtcccaaaattg 38476568  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  38476569 ctgagaagacgccacgtgtcccaaaaaaggg-tcataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttatggggtcaa 38476667  T
Q  448 aagaacatatttccctaaa 466  Q
    |||| ||||||||||||||    
T  38476668 aagagcatatttccctaaa 38476686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 318 - 468
Target Start/End: Original strand, 41663592 - 41663742
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||| ||||||||||| |||||||||| |||| |||||||||    
T  41663592 acaattttgacccatttcgtcccaaaattgctaagaagatgccacgtgtcccaaaaaaggggccataatcgcaattttttgagaaaataaagagtcaaaa 41663691  T
Q  418 gattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
     || ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  41663692 aatcatatttcccttatgttatggggtcaaaagagcatatttccctaaaca 41663742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 252 - 468
Target Start/End: Original strand, 40428642 - 40428857
Alignment:
Q  252 taaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgctga 351  Q
    |||| ||| ||||||| |||||| |||  ||||||||||||||||||| || ||||        || |||||||| |||  ||||| |||||||||||||    
T  40428642 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaattttggcccccttcgtcccaaaattgctga 40428741  T
Q  352 gaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaaga 451  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||  ||||||||| ||||||| |  ||||||||||||||||||| ||||||||||    
T  40428742 gaagacgccacgtgtcccaaaaaaggggtcataatcgcaattttttgtaaagataaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaaga 40428840  T
Q  452 acatatttccctaaaca 468  Q
    |||||||||||||||||    
T  40428841 acatatttccctaaaca 40428857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 248 - 468
Target Start/End: Original strand, 16900996 - 16901215
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||||||| ||||||| | |||| |||  |||||||||||||||||   || ||||        || |||||||| |||||||| | |||||||||    
T  16900996 aggctaaactgcacttttcgcctcctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttggcccatttcatcccaaaattg 16901095  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||| ||||||    
T  16901096 ctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgttaggaggtcaa 16901194  T
Q  448 aagaacatatttccctaaaca 468  Q
    |||| ||||||||||||||||    
T  16901195 aagagcatatttccctaaaca 16901215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 25556945 - 25557093
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||  ||||||||| |||||||     
T  25556945 caattttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa- 25557043  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  25557044 aacatatttcccttatgttagggggtcaaaagagcatatttccctaaaca 25557093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 248 - 468
Target Start/End: Complemental strand, 245899 - 245680
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||| ||| ||||||| | |||| ||| ||||||||||||||||| || || ||||        || |||||||| |||  ||| | | |||||||    
T  245899 aggctaaagtgcacttttcgccacctatgttttaaaatgttgcgattttagtcccctattaaaaaaaatggcaattttggcccccttcatccgaaaattg 245800  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||| ||||||    
T  245799 ctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttaggaggtcaa 245701  T
Q  448 aagaacatatttccctaaaca 468  Q
    |||| ||||||||||||||||    
T  245700 aagagcatatttccctaaaca 245680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 18695237 - 18695089
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| |  |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||| |||||||     
T  18695237 caattttggcccctttcatctcaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa- 18695139  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  18695138 agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaaca 18695089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 323 - 468
Target Start/End: Original strand, 10293161 - 10293305
Alignment:
Q  323 tttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagatta 422  Q
    |||| |||||||||| | |||| ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||  ||||||||||||||||| |  |    
T  10293161 tttggcccatttcgtcctaaaaatgctgagaagacgccacatgtcttaaaaaagaggtcataatcgcaactttttggaaagataaggagtcaaaa-aaca 10293259  T
Q  423 tatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||    
T  10293260 tatttcccttatgttaggaggtcaaaagagcatatttcccaaaaca 10293305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 333 - 468
Target Start/End: Original strand, 23040035 - 23040169
Alignment:
Q  333 ttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccctt 432  Q
    ||||| |||||||||||||||||   |||||| |  ||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  23040035 ttcgtcccaaaattgctgagaag---ccacgttttccaaaaaaagggtcataatcgcaactttttgagaagataaggggtcaaaagatcatatttccctt 23040131  T
Q  433 atgttaggg--ggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||  |||||||||| ||||||||||||||||    
T  23040132 atgttaggggaggtcaaaagagcatatttccctaaaca 23040169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 316 - 468
Target Start/End: Complemental strand, 34125297 - 34125145
Alignment:
Q  316 tgacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaa 415  Q
    ||||||||||| |||  ||| | |||||||| ||||||| |||||||||||  ||||| | ||||||||||||||||||||||||||||||||  |||||    
T  34125297 tgacaattttggcccccttcatcccaaaattactgagaatacgccacgtgttccaaaacatgggtcataatcgcaactttttgagaagataagaggtcaa 34125198  T
Q  416 aagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    | ||| |||||| |||||||||||||| |||||||| ||||||||||||||||    
T  34125197 atgatcatattttccttatgttaggggatcaaaagagcatatttccctaaaca 34125145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 247 - 468
Target Start/End: Complemental strand, 2373451 - 2373231
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||||||| ||||||  ||||||||||  |||| |||||||||||||   | ||||         |||||||||| ||| | |||| ||||||||    
T  2373451 taggctaaactgcacttttcaacccctaagtttcaaaaagttgcgattttggcctcctatttaaaaaaaggacaattttggcccctgtcgtcccaaaatt 2373352  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    ||| ||||||||||||||||| | ||||||||||||||||||||| |||||||||| |||||| |||| || || |||||||||||||||||  ||||||    
T  2373351 gctaagaagacgccacgtgtccccaaaaaggggtcataatcgcaaatttttgagaaaataaggggtcataatatcatatttcccttatgtta-tgggtca 2373253  T
Q  447 aaagaacatatttccctaaaca 468  Q
    ||||| ||||||| | ||||||    
T  2373252 aaagagcatattttcttaaaca 2373231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 31055384 - 31055532
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||| |||||| |||||||||| || |||||||||||||||||||| ||||||  ||||||||| |||||||     
T  31055384 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaattttttgtaaagataaggggtcaaaa- 31055482  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  31055483 aacatatttcccttatgttaaggggtcaaaagagcatatttccctaaaca 31055532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 37961338 - 37961467
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||||||||||||| ||||||||| |  |||||||| |||||| |||||||||||||||| ||||| |||||||||| || ||||||||||||||    
T  37961338 ccaaaattgctgagaagacaccacgtgtcccttaaaaggggccataattgcaactttttgagaagttaaggggtcaaaagatcatttttcccttatgtta 37961437  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    || |||||||||| | ||||||||||||||    
T  37961438 ggcggtcaaaagagcgtatttccctaaaca 37961467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 245 - 468
Target Start/End: Original strand, 16307473 - 16307695
Alignment:
Q  245 tataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaa 344  Q
    |||||| |||||||| ||||||  |||||| ||| |||||||||| ||||||||| || ||||        || |||||||| ||| |||| |   ||||    
T  16307473 tataggttaaactgcacttttcaccccctatgttttaaaatgttgtgattttggtcccctattaaaaaaa-tggcaattttggcccctttcatcttaaaa 16307571  T
Q  345 ttgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta-ggggg 443  Q
    |||||||||||||||||| ||||  ||||||||||||||||| |||||||||||  ||||||||||||||||| |  |||||| |||||||||| |||||    
T  16307572 ttgctgagaagacgccacatgtccaaaaaaaggggtcataattgcaactttttgtaaagataaggagtcaaaa-aacatattttccttatgttagggggg 16307670  T
Q  444 tcaaaagaacatatttccctaaaca 468  Q
    |||||||| ||||||||||||||||    
T  16307671 tcaaaagagcatatttccctaaaca 16307695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 318 - 468
Target Start/End: Original strand, 17825566 - 17825715
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    ||||||||| ||| |||| |  |||||||  | ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| | |||||||    
T  17825566 acaattttggcccctttcatctcaaaattttttagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgacaagataaagggtcaaaa 17825665  T
Q  418 gattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||  ||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  17825666 gaacatatttctcttatgtta-ggggtcaaaagagcatatttccctaaaca 17825715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 248 - 468
Target Start/End: Original strand, 26639036 - 26639255
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||| ||| ||||||| |||||| |||  ||||||||| |||||||  ||| ||||        || |||||||| |||  ||| | |||||||||    
T  26639036 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgtgattttgactccctattaaaaaaaatggcaattttggcccccttcatcccaaaattg 26639135  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
     ||||||||||||||||||| |||||||| || |||||| |||||||||||  ||||||||| |||||||    ||||||||||||||||||| ||||||    
T  26639136 ttgagaagacgccacgtgtcccaaaaaagaggccataattgcaactttttgtaaagataaggggtcaaaa-cgcatatttcccttatgttaggaggtcaa 26639234  T
Q  448 aagaacatatttccctaaaca 468  Q
    |||| ||||||||||||||||    
T  26639235 aagagcatatttccctaaaca 26639255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 341 - 468
Target Start/End: Complemental strand, 36641355 - 36641229
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||   ||||||| | ||||||| |  |||||||||||||||||||    
T  36641355 aaaattgctgagaagacgccatgtgtcccaaaaaagggatcataatcgcaactttttataaagataacgggtcaaaa-agcatatttcccttatgttagg 36641257  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| |||||||| |||||||    
T  36641256 aggtcaaaagagcatatttctctaaaca 36641229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 339 - 468
Target Start/End: Complemental strand, 10379495 - 10379368
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    |||||||| || |||||| ||||| ||||||| |||||||||||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||    
T  10379495 ccaaaatttctcagaagatgccacttgtctcagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 10379397  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||||| ||||||| ||||||||    
T  10379396 -ggggtcaaaagagcatattttcctaaaca 10379368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 247 - 468
Target Start/End: Complemental strand, 38408933 - 38408715
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    |||||||||||||  ||||||||| ||| ||| || ||||||||||||||||| || ||||        |  |||||||| ||| |||| | ||||||||    
T  38408933 taggctaaactgcatttttcgtcctctatgttttataatgttgcgattttggtcccctattaaaaaaattagcaattttggccc-tttcatcccaaaatt 38408835  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    ||| |||||| |||||||||| || |||| |||||||||| |||||||||||  ||||||||| ||||||| |  ||||||||||||||||| | |||||    
T  38408834 gctcagaagatgccacgtgtcccagaaaatgggtcataatagcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta-gtggtca 38408737  T
Q  447 aaagaacatatttccctaaaca 468  Q
    ||||| |||||||| |||||||    
T  38408736 aaagagcatatttctctaaaca 38408715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 342 - 466
Target Start/End: Original strand, 35302007 - 35302131
Alignment:
Q  342 aaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa-gattatatttcccttatgttagg 440  Q
    |||||| |||| |||||||||||||| || || ||||| |||||||||| |||||| ||||||||||| ||||||| ||| |||||| | ||||||||||    
T  35302007 aaattgttgagcagacgccacgtgtcccagaacaggggccataatcgcagcttttttagaagataagg-gtcaaaaagatcatatttacattatgttagg 35302105  T
Q  441 gggtcaaaagaacatatttccctaaa 466  Q
    ||||||||||| ||||||||||||||    
T  35302106 gggtcaaaagagcatatttccctaaa 35302131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 323 - 468
Target Start/End: Original strand, 17704661 - 17704804
Alignment:
Q  323 tttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagatta 422  Q
    ||||| ||||||||| |||||||||||||||| | ||||| | || ||||||||||| ||||||  ||||||||||  ||||||| | ||||||| | ||    
T  17704661 tttgatccatttcgtcccaaaattgctgagaacatgccacttatcccaaaaaaggggccataatttcaactttttgtaaagataaagggtcaaaa-agta 17704759  T
Q  423 tatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||||||||  ||||||||||| ||||||| ||||||||    
T  17704760 tatttcccttatgtta-tgggtcaaaagagcatattttcctaaaca 17704804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 341 - 468
Target Start/End: Complemental strand, 19169555 - 19169429
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||||||||||||||||||||||   |||||| ||| |||||| |||||||||||  ||||||||| ||||||| |  ||||||||||||||||| |    
T  19169555 aaaattgctgagaagacgccacgtgttcaaaaaaatgggccataattgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttaag 19169457  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     ||||||| || ||||||| ||||||||    
T  19169456 aggtcaaatgagcatattttcctaaaca 19169429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 431
Target Start/End: Original strand, 8673926 - 8674038
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    |||||||||||||  ||||||| ||||||| |||||||| | ||||||||| |||||| |||| |||||| ||||||||||  ||||||||| |||||||    
T  8673926 acaattttgaccccattcgttctaaaattgttgagaagatgtcacgtgtct-aaaaaatgggttataatcacaactttttgtaaagataaggggtcaaaa 8674024  T
Q  418 gattatatttccct 431  Q
    ||  ||||||||||    
T  8674025 gagcatatttccct 8674038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 340 - 468
Target Start/End: Complemental strand, 7187401 - 7187275
Alignment:
Q  340 caaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttag 439  Q
    |||||||| | | |||||||||| |||| |||||||||| |||||||||||||||||||  || ||||   |||| || |  ||||||||||||||||||    
T  7187401 caaaattgtttaaaagacgccacatgtcccaaaaaaggg-tcataatcgcaactttttgtaaaaataattggtcataaaac-atatttcccttatgttag 7187304  T
Q  440 ggggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||||| |||||||||||||||    
T  7187303 agggtcaaaagaatatatttccctaaaca 7187275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 341 - 468
Target Start/End: Original strand, 23765484 - 23765608
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    |||||| ||||||||||||||||||||  |||||||    ||||||||||||||||||  |||||||    |||||| |  |||||||||||||||||||    
T  23765484 aaaatttctgagaagacgccacgtgtccaaaaaaagac--cataatcgcaactttttgtaaagataaatgatcaaaa-agcatatttcccttatgttagg 23765580  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||||||||||||    
T  23765581 aggtcaaaagagcatatttccctaaaca 23765608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 341 - 468
Target Start/End: Original strand, 23815332 - 23815456
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    |||||| ||||||||||||||||||||  |||||||    ||||||||||||||||||  |||||||    |||||| |  |||||||||||||||||||    
T  23815332 aaaatttctgagaagacgccacgtgtccaaaaaaagac--cataatcgcaactttttgtaaagataaatgatcaaaa-agcatatttcccttatgttagg 23815428  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||||||||||||    
T  23815429 aggtcaaaagagcatatttccctaaaca 23815456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 341 - 468
Target Start/End: Complemental strand, 462978 - 462852
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||| ||| |||||||||||||||| |||||   |||||||||||||||||||||  ||||||||| |||||||||  ||||||| ||||| |||      
T  462978 aaaattgttgaaaagacgccacgtgtctaaaaaagaaggtcataatcgcaactttttgtaaagataaggggtcaaaagaacatatttctcttatatta-t 462880  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     ||||||||   ||||||||||||||||    
T  462879 aggtcaaaaaggcatatttccctaaaca 462852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 339 - 468
Target Start/End: Complemental strand, 7835923 - 7835796
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||| ||| |||||||||||||| ||||| |||||| ||| ||||||| || || ||||  ||||||||| ||||||| |  |||||| ||||||||||    
T  7835923 ccaaagttgttgagaagacgccacatgtctaaaaaaaagggccataatcccacctctttgtaaagataaggggtcaaaa-aacatattttccttatgtta 7835825  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
      ||||||||||| ||||||||||||||||    
T  7835824 -tgggtcaaaagagcatatttccctaaaca 7835796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 386 - 468
Target Start/End: Complemental strand, 20653987 - 20653906
Alignment:
Q  386 tcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||||||||||||||||   | ||||| | ||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  20653987 tcgcaactttttgagaagataagagataaaaagttcatatttcacttatgtta-ggggtcaaaagagcatatttccctaaaca 20653906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 332 - 468
Target Start/End: Original strand, 15885248 - 15885382
Alignment:
Q  332 tttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccct 431  Q
    ||||||| ||||||||||||||| || |||| |||| |||||||  |  |||||||| |||||||||  ||||||||| ||||| | |  ||||||||||    
T  15885248 tttcgtttcaaaattgctgagaaaacaccacatgtcccaaaaaaatgaccataatcgaaactttttgtaaagataagg-gtcaaca-aacatatttccct 15885345  T
Q  432 tatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||| | ||||||||||  |||||||| ||||||    
T  15885346 tatgttaagaggtcaaaagagaatatttccataaaca 15885382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 397
Target Start/End: Complemental strand, 38322408 - 38322357
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaacttttt 397  Q
    |||||||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  38322408 tgctgagaagccgccacgtgtcccaaaaaaggggtcaaaatcgcaacttttt 38322357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 422 - 468
Target Start/End: Complemental strand, 8645929 - 8645883
Alignment:
Q  422 atatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  8645929 atatttcccttatgttaggaggtcaaaagagcatatttccctaaaca 8645883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 346 - 431
Target Start/End: Complemental strand, 18739923 - 18739837
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttga-gaagataaggagtcaaaagattatatttccct 431  Q
    |||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||  ||||||| | | |||||||  ||||||||||    
T  18739923 tgctgagaagccgccacgtgtcccaaaaaaggggtcaaaatcgtaactttttgataaagataaagggccaaaagagcatatttccct 18739837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 247 - 364
Target Start/End: Complemental strand, 31648290 - 31648173
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||||||| |||||||||||||| |||  ||||||||||||||||||     ||||        || |||||||||||| |||| | |||||| |    
T  31648290 taggctaaactgcacttttcgtcccctatgtttcaaaatgttgcgattttggccttctattaaaaaaaatggcaattttgacccctttcatcccaaaact 31648191  T
Q  347 gctgagaagacgccacgt 364  Q
    ||||||||||||||||||    
T  31648190 gctgagaagacgccacgt 31648173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 466
Target Start/End: Original strand, 23040200 - 23040256
Alignment:
Q  411 gtcaaaagattatatttcccttatgtta-gggggtcaaaagaacatatttccctaaa 466  Q
    |||||||| | ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  23040200 gtcaaaaggtcatatttcccttatgttaggggggtcaaaagagcatatttccctaaa 23040256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 346 - 397
Target Start/End: Original strand, 38545373 - 38545424
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaacttttt 397  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||| |||||    
T  38545373 tgctgagaagccgccacgtgtcccgaaaaaggggtcataatcgcaatttttt 38545424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 15885465 - 15885409
Alignment:
Q  251 ctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttatt 307  Q
    ||||||||| ||||| ||||||||||||  |||||||||| |||||||| |||||||    
T  15885465 ctaaactgcactttttgtcccctaagtttcaaaatgttgctattttggtcccttatt 15885409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 398
Target Start/End: Original strand, 20732628 - 20732680
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttg 398  Q
    |||||||||| ||||||||||| ||| ||||||| || |||||||||||||||    
T  20732628 tgctgagaagccgccacgtgtcccaacaaaggggccaaaatcgcaactttttg 20732680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 20654100 - 20654049
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||||||| ||||||| ||||||||||  ||||||||| ||||||||    
T  20654100 taggctaaactgcacttttcgacccctaagtttcaaaatgttgtgattttgg 20654049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 26639342 - 26639291
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggt 299  Q
    |||||||||| | |||||||||| |||||||  |||||||||||||||||||    
T  26639342 aggctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggt 26639291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 38408627 - 38408678
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||||| | ||||||||||||||||||  ||||| ||||||||||||    
T  38408627 taggctaaactccacttttcgtcccctaagtttcaaaatattgcgattttgg 38408678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 4800935 - 4800981
Alignment:
Q  250 gctaaactgctcttttcgtcccctaagttataaaatgttgcgatttt 296  Q
    ||||||||||  |||||| |||||||||| |||||||||||||||||    
T  4800935 gctaaactgcatttttcgccccctaagttttaaaatgttgcgatttt 4800981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 10293394 - 10293341
Alignment:
Q  244 atataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttg 297  Q
    |||||||||||| ||| |||||||||| |||||||  ||||||||| |||||||    
T  10293394 atataggctaaattgcacttttcgtccactaagtttcaaaatgttgtgattttg 10293341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 31576493 - 31576542
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||||| ||||||| ||||||||||  |||||||||| |||||||    
T  31576493 ggctaaactgcacttttcgacccctaagtttcaaaatgttgcaattttgg 31576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 32466133 - 32466088
Alignment:
Q  252 taaactgctcttttcgtcccctaagttataaaatgttgcgattttg 297  Q
    |||||||  ||||||||||||||||||  |||||||||||||||||    
T  32466133 taaactgtacttttcgtcccctaagtttcaaaatgttgcgattttg 32466088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 18695004 - 18695052
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttg 297  Q
    ||||||||| | ||||||| || ||||||| ||||||||||||||||||    
T  18695004 ggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttg 18695052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 2e-54; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 247 - 468
Target Start/End: Complemental strand, 16972156 - 16971936
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||||||| ||||||| |||||||||| ||||||||||||||||| |  || ||||        ||||||||||| |||||||||||||||||||    
T  16972156 taggctaaactgcacttttcgccccctaagttttaaaatgttgcgattttagccccctattaaaaaaa-tgacaattttggcccatttcgttccaaaatt 16972058  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    ||| |||| |||||| ||||| ||||| |||||||||||||||||  |||||||||||||| |||||||||| | ||||||||||||||||||||||||     
T  16972057 gctaagaaaacgccatgtgtcccaaaataggggtcataatcgcaatattttgagaagataaagagtcaaaaggtcatatttcccttatgttagggggtct 16971958  T
Q  447 aaagaacatatttccctaaaca 468  Q
    ||||| ||||| ||||||||||    
T  16971957 aaagagcatatatccctaaaca 16971936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 249 - 468
Target Start/End: Original strand, 2260378 - 2260597
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgc 348  Q
    ||||||| ||| ||||||| ||| |||||| ||||||||||||||||||||||||||||        | |||||||||  ||||||||||| |||||| |    
T  2260378 ggctaaagtgcacttttcgacccttaagttttaaaatgttgcgattttggttccttattaaaaaaaattacaattttggtccatttcgttctaaaattac 2260477  T
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaa 448  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| || |||| || ||||||||||||| ||| |||||||||    
T  2260478 tgagaagacgccacgtatcccaaaaaaggggtcagaatcgcaactttttgagaagataaggggttaaaatatcatatttcccttatattatggggtcaaa 2260577  T
Q  449 agaacatatttccctaaaca 468  Q
    | | |||||||| |||||||    
T  2260578 aaagcatatttcactaaaca 2260597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 252 - 468
Target Start/End: Original strand, 4455045 - 4455261
Alignment:
Q  252 taaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgctga 351  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||| | ||||||||        | |||||||||  |  |||||| |||||||||||||    
T  4455045 taaactgcacttttcgacccctaagttttaaaatgttgcgattttagctccttattaaaaaaaattacaattttggtctttttcgtcccaaaattgctga 4455144  T
Q  352 gaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaaga 451  Q
    ||||| ||||| |||| |||||||  || ||||||||||||||||||||||||||||  ||||||| || ||||||||||||||||| ||||||||||||    
T  4455145 gaagatgccacatgtcccaaaaaaatggccataatcgcaactttttgagaagataagtggtcaaaaaatcatatttcccttatgttacggggtcaaaaga 4455244  T
Q  452 acatatttccctaaaca 468  Q
     ||||||| ||||||||    
T  4455245 gcatattttcctaaaca 4455261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 332 - 468
Target Start/End: Original strand, 16551726 - 16551862
Alignment:
Q  332 tttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccct 431  Q
    |||||| ||||||||||||||||||||||||||||| ||||| | ||| ||||||||||||||||||||||||||||| |||||||||| ||||||  ||    
T  16551726 tttcgtcccaaaattgctgagaagacgccacgtgtcccaaaacaagggccataatcgcaactttttgagaagataaggggtcaaaagatcatatttgtct 16551825  T
Q  432 tatgttagggggtcaaaagaacatatttccctaaaca 468  Q
     ||||||||||||||||||| ||||||||||||||||    
T  16551826 gatgttagggggtcaaaagagcatatttccctaaaca 16551862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 248 - 468
Target Start/End: Complemental strand, 24196566 - 24196347
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||||||| ||||||| | |||| ||| |||||||||||||||||||  || ||||        || |||||||| ||| |||||| | |||||||    
T  24196566 aggctaaactgcacttttcgcctcctatgttttaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccctttcgtccaaaaattg 24196467  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
    |||||||||||||||||||| ||||||||||| |||| |||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||| ||||||    
T  24196466 ctgagaagacgccacgtgtcccaaaaaaggggccatattcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttaggaggtcaa 24196368  T
Q  448 aagaacatatttccctaaaca 468  Q
    |||| |||||||| |||||||    
T  24196367 aagagcatatttctctaaaca 24196347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 19077995 - 19078143
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||| |||||||     
T  19077995 caattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 19078093  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  19078094 aacatatttcccttatgttaggaggtcaaaagagcatatttccctaaaca 19078143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 19125885 - 19126033
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||| |||||||     
T  19125885 caattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 19125983  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  19125984 aacatatttcccttatgttaggaggtcaaaagagcatatttccctaaaca 19126033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 29182091 - 29182218
Alignment:
Q  340 caaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttag 439  Q
    |||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||     
T  29182091 caaaattgctgagaagacgcaacgtgtctcaaaaaatgggccataatcgcaactttatgagaagataaggggtcaaaagatcatatttcccttatgtta- 29182189  T
Q  440 ggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||||| |||||||| |||||||    
T  29182190 ggggtcaaaagagcatatttctctaaaca 29182218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 250 - 468
Target Start/End: Original strand, 48471864 - 48472081
Alignment:
Q  250 gctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgct 349  Q
    |||||| ||| |||||||||||||| |||  ||||||||||||||||||  || ||||        || |||||||| |||  ||| | |||||||||||    
T  48471864 gctaaagtgcacttttcgtcccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgct 48471963  T
Q  350 gagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaa 449  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||||||  ||||||||| ||||||| |  ||||||| ||||||||||| ||||||||    
T  48471964 gagaagacgccacgtgtcccaaaaaagggaccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttctcttatgttaggaggtcaaaa 48472062  T
Q  450 gaacatatttccctaaaca 468  Q
    || ||||||||||||||||    
T  48472063 gagcatatttccctaaaca 48472081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 341 - 468
Target Start/End: Complemental strand, 24962165 - 24962039
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||||    
T  24962165 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttagg 24962067  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||||||||||||    
T  24962066 aggtcaaaagagcatatttccctaaaca 24962039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 246 - 468
Target Start/End: Original strand, 46432213 - 46432434
Alignment:
Q  246 ataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaat 345  Q
    |||||||||| ||| ||||||| |||||| |||  | ||||||||||||||||  || ||||        |  |||||||| ||| |||| | |||||||    
T  46432213 ataggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggccccctattaaaaaaaatagcaattttggcccctttcatcccaaaat 46432312  T
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtc 445  Q
    ||||  ||||| |||||||||| || |||||||||||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||||||||    
T  46432313 tgctcggaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgttagggggtc 46432411  T
Q  446 aaaagaacatatttccctaaaca 468  Q
    |||||| ||||||||||||||||    
T  46432412 aaaagagcatatttccctaaaca 46432434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 248 - 468
Target Start/End: Original strand, 4059521 - 4059740
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||| ||| ||||||| |||||| |||  ||||||||||||||||||  || ||||        |  |||||||| ||| |||| | |||||||||    
T  4059521 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaattgcaattttggcccctttcatcccaaaattg 4059620  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
    |||||||||||||||||||| ||||||| ||  ||||||||||||||||||  ||||||||| ||||||| |  |||||| |||||||||||| ||||||    
T  4059621 ctgagaagacgccacgtgtcccaaaaaatggaccataatcgcaactttttgtaaagataaggggtcaaaa-aacatattttccttatgttaggaggtcaa 4059719  T
Q  448 aagaacatatttccctaaaca 468  Q
    |||| ||||||||||||||||    
T  4059720 aagagcatatttccctaaaca 4059740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 27092922 - 27093070
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| |||||||| | ||||||||||||||||||||||||||||  ||||||||||| |||||| |||||||||||  ||||||||| |||||||     
T  27092922 caattttggcccatttcatcccaaaattgctgagaagacgccacgtgttccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa- 27093020  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||| | ||| |||||||||||||||| ||||||||||||||||    
T  27093021 aacatatttcacatatattagggggtcaaaagagcatatttccctaaaca 27093070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 316 - 468
Target Start/End: Complemental strand, 9387933 - 9387778
Alignment:
Q  316 tgacaattttgacccatttcgttccaaaattgctgaga--agacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtc 413  Q
    |||||||||||   | |||||| ||||||||| |||||  ||||||||| |||| ||||| ||| ||||||||||||| ||||||||||||||| | |||    
T  9387933 tgacaattttggttcctttcgtcccaaaattgatgagaagagacgccacatgtcccaaaacaggtgtcataatcgcaaatttttgagaagataaagggtc 9387834  T
Q  414 aaaagattatatttcccttatgtta-gggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  9387833 aaaagattatatttcccttatgttaggggggtcaaaagagcatatttccttaaaca 9387778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 316 - 468
Target Start/End: Original strand, 18606751 - 18606902
Alignment:
Q  316 tgacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaa 415  Q
    ||||||||||| ||| |||||| || || |||||||| |||||| ||||||| ||||| | |||| |||||| ||||||||||||||||||||| |||||    
T  18606751 tgacaattttggcccctttcgtcccgaa-ttgctgagcagacgctacgtgtcccaaaacaagggtgataatcacaactttttgagaagataaggggtcaa 18606849  T
Q  416 aagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||  ||||| |||||||||| |||||||||||| ||||||||||||||||    
T  18606850 aagatcgtattttccttatgttatggggtcaaaagagcatatttccctaaaca 18606902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 341 - 468
Target Start/End: Complemental strand, 3617011 - 3616885
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||| | |    
T  3617011 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtgaag 3616913  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||||||||||||    
T  3616912 aggtcaaaagagcatatttccctaaaca 3616885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 320 - 468
Target Start/End: Complemental strand, 22786260 - 22786116
Alignment:
Q  320 aattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaaga 419  Q
    ||||||| ||||||||||  |||||||||||||||||||||| ||||| ||||| ||||| ||| |   ||||||||||||||||||||| |||||||||    
T  22786260 aattttggcccatttcgtctcaaaattgctgagaagacgccaagtgtcccaaaacaggggccatca---caactttttgagaagataaggggtcaaaaga 22786164  T
Q  420 ttatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    | ||||||| ||||||||| |  ||||||||| ||||||||||||||||    
T  22786163 tcatatttcacttatgtta-gatgtcaaaagagcatatttccctaaaca 22786116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 250 - 468
Target Start/End: Original strand, 43706655 - 43706871
Alignment:
Q  250 gctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgct 349  Q
    |||||||||| ||||||| |||||| |||  | ||||||||||||||||  || ||||        |  |||||||| ||| |||| | |||||||||||    
T  43706655 gctaaactgcacttttcgccccctatgtttcataatgttgcgattttggccccctattaaaaaaaatagcaattttggcccctttcatcccaaaattgct 43706754  T
Q  350 gagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaa 449  Q
     |||||| |||||||||| |  |||||||||||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||  |||||||||    
T  43706755 cagaagatgccacgtgtcccggaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta-tgggtcaaaa 43706852  T
Q  450 gaacatatttccctaaaca 468  Q
    || ||||||||||||||||    
T  43706853 gagcatatttccctaaaca 43706871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 51719192 - 51719339
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    ||||||||  || |||| ||||||||||||| |||||| ||||||| ||||| |||||||||||||||||||||||||||  ||||||||| ||  |||     
T  51719192 caattttggtccctttcattccaaaattgctcagaagatgccacgtatctcagaaaaggggtcataatcgcaactttttgtaaagataaggggt--aaaa 51719289  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||| |||||||||||||| |||||||| ||||||||||||||||    
T  51719290 aacatattttccttatgttaggggatcaaaagagcatatttccctaaaca 51719339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 2425458 - 2425310
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| |||||||| | ||||||||||| |||||| |||||||||| || |||| ||||||||||||||||||||||  |||||||||  | ||||     
T  2425458 caattttggcccatttcatcccaaaattgctcagaagatgccacgtgtcccagaaaatgggtcataatcgcaactttttgtaaagataagggttaaaaaa 2425359  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||||||||||||||| ||||||||||| |||| |||||||||||    
T  2425358 aacatatttcccttatgttagagggtcaaaagagcata-ttccctaaaca 2425310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 340 - 468
Target Start/End: Complemental strand, 21185416 - 21185291
Alignment:
Q  340 caaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttag 439  Q
    |||||||||||||||| |||| |||||  |||||||||| ||||||||||||||||||||||||||| || |||||||||| ||||||  |||||||||     
T  21185416 caaaattgctgagaagccgcctcgtgttccaaaaaaggg-tcataatcgcaactttttgagaagatagggggtcaaaagatcatattt-tcttatgtta- 21185320  T
Q  440 ggggtcaaaagaacatatttccctaaaca 468  Q
     ||||||||||||||||||||||||||||    
T  21185319 agggtcaaaagaacatatttccctaaaca 21185291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 341 - 468
Target Start/End: Complemental strand, 24750010 - 24749884
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||||| ||||||||||||||||  ||||||| ||| ||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||| |    
T  24750010 aaaattgctaagaagacgccacgtgttccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttatg 24749912  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||||||||||||    
T  24749911 aggtcaaaagagcatatttccctaaaca 24749884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 2657583 - 2657730
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| ||| || ||||||||| |||||| ||||||||||||  |||||| ||||||||||| ||||||||| | ||||||||| ||||||||    
T  2657583 caattttggccccttttgtcccaaaattgttgagaa-acgccacgtgtcctaaaaaaagggtcataatcacaacttttttaaaagataaggggtcaaaag 2657681  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||| |||||||||||| |||||| ||| ||||||||||||||||    
T  2657682 agcatattt-ccttatgttaggcggtcaatagagcatatttccctaaaca 2657730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 341 - 468
Target Start/End: Complemental strand, 29676291 - 29676165
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||||   ||||||||| ||||||| |  ||||||| |||||||||||    
T  29676291 aaaattgttgagaaggcgccacgtgtcccaaaaaaggggccataatcgcaactttttataaagataaggggtcaaaa-agcatatttcacttatgttagg 29676193  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     | ||| |||| ||||||||||||||||    
T  29676192 agatcacaagagcatatttccctaaaca 29676165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 339 - 468
Target Start/End: Complemental strand, 47685315 - 47685187
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||||| |||||||||||||||||  ||||||| |||||| ||||||||||||||  ||| ||||| ||||||| |  |||||| ||||||||||    
T  47685315 ccaaaattgctaagaagacgccacgtgtcctaaaaaagaggtcattatcgcaactttttgtaaaggtaaggggtcaaaa-aacatattttccttatgtta 47685217  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    |||| |||||| | ||||||||| ||||||    
T  47685216 ggggatcaaaatagcatatttccttaaaca 47685187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 332 - 420
Target Start/End: Original strand, 9554284 - 9554372
Alignment:
Q  332 tttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagat 420  Q
    |||||| |||||||||  |||||| ||||||||||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||    
T  9554284 tttcgtcccaaaattgtagagaaggcgccacgtgtctcaaaacaggggccatagtcgcaactttttgagaagataaggggtcaaaagat 9554372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 320 - 466
Target Start/End: Original strand, 31084683 - 31084828
Alignment:
Q  320 aattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaaga 419  Q
    ||||||| || ||||||||||||||||| ||||||  | |||| |||| |||||| ||||||||||||| |||||||||  ||||||||| ||||||| |    
T  31084683 aattttggcctatttcgttccaaaattgttgagaaagccccacatgtcccaaaaagggggtcataatcgaaactttttgtaaagataaggggtcaaaa-a 31084781  T
Q  420 ttatatttcccttatgttagggggtcaaaagaacatatttccctaaa 466  Q
      |||||| || |||||||||||||||||| |  |||||||| ||||    
T  31084782 gcatattttccatatgttagggggtcaaaatattatatttccataaa 31084828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 382 - 468
Target Start/End: Complemental strand, 10684965 - 10684878
Alignment:
Q  382 ataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttag-ggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||  |||||||||| |||||||| |||  |||||||||||||||    
T  10684965 ataatcgcaactttttgagaagataaggggtcaaaagatcatatttttcttatgttaggggggtcaatagagtatatttccctaaaca 10684878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 406 - 468
Target Start/End: Complemental strand, 21148126 - 21148064
Alignment:
Q  406 aaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  21148126 aaggggtcaaaagatcatatttcccttatgttagggggtcaaaagagcatatttccctaaaca 21148064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 320 - 468
Target Start/End: Original strand, 28920727 - 28920869
Alignment:
Q  320 aattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaa-ggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    ||||||||||| |||| | | |||||||||||||||||||||| |||| ||||||| |||| ||||||||| ||||||||  ||||||||| |||||||     
T  28920727 aattttgacccctttcatccaaaaattgctgagaagacgccacatgtcccaaaaaagggggccataatcgccactttttgtaaagataaggggtcaaaa- 28920825  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||      |||||||||| |||||||||| ||||||||||||||||    
T  28920826 agcata------ttatgttaggaggtcaaaagagcatatttccctaaaca 28920869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 252 - 382
Target Start/End: Complemental strand, 21148248 - 21148118
Alignment:
Q  252 taaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgctga 351  Q
    |||||||| ||||||| ||||||| || |||||||||||||||||||  || ||||        | |||||| || ||| |||||| |||||| ||||||    
T  21148248 taaactgcacttttcgacccctaaattttaaaatgttgcgattttggccccctattaaaaaaaattacaattatggcccctttcgtcccaaaactgctga 21148149  T
Q  352 gaagacgccacgtgtctcaaaaaaggggtca 382  Q
    ||| |||||||||||| ||||||||||||||    
T  21148148 gaaaacgccacgtgtcccaaaaaaggggtca 21148118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 24196255 - 24196310
Alignment:
Q  243 aatataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||||||||| | ||||||| ||||||||||  ||||||||||||||||||    
T  24196255 aatataggctaaactccacttttcgccccctaagtttcaaaatgttgcgattttgg 24196310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 337 - 468
Target Start/End: Original strand, 26605365 - 26605493
Alignment:
Q  337 ttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgt 436  Q
    ||||||||||||| ||||||||| ||||||| |||||||  | ||||||||| |||||||||  || |||||   |||||| |  ||||||  |||||||    
T  26605365 ttccaaaattgctaagaagacgctacgtgtcccaaaaaatcgatcataatcgtaactttttgtaaaaataagatatcaaaa-aacatattt-tcttatgt 26605462  T
Q  437 tagggggtcaaaagaacatatttccctaaaca 468  Q
    || |||||||||| | ||||||||||||||||    
T  26605463 ta-ggggtcaaaatagcatatttccctaaaca 26605493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 348 - 397
Target Start/End: Complemental strand, 16858536 - 16858487
Alignment:
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaacttttt 397  Q
    |||||||| |||||| |||| ||||||||||| |||||||||||||||||    
T  16858536 ctgagaagccgccacatgtcccaaaaaaggggccataatcgcaacttttt 16858487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 28920957 - 28920906
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||||| | ||||||| ||||||||||  ||||||||||||||||||    
T  28920957 taggctaaacttcacttttcgccccctaagtttcaaaatgttgcgattttgg 28920906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 431
Target Start/End: Original strand, 18106817 - 18106891
Alignment:
Q  358 gccacgtgtctcaaaaaaggggtcataatcgcaa-ctttttgagaagataaggagtcaaaagattatatttccct 431  Q
    |||||||||| ||||||||||| |||||||||||  ||||||  |||||||||  ||||||||  ||||||||||    
T  18106817 gccacgtgtcccaaaaaaggggccataatcgcaatttttttgcaaagataagggatcaaaagagcatatttccct 18106891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 18606989 - 18606939
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttg 297  Q
    ||||||||||| | ||||||| |||||||||| |||||||||| |||||||    
T  18606989 taggctaaactacacttttcgacccctaagttttaaaatgttgtgattttg 18606939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 24750074 - 24750024
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    |||||||||||| ||||||| |||||| ||| ||||||||||| |||||||    
T  24750074 aggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttgg 24750024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 6285261 - 6285334
Alignment:
Q  335 cgttccaaaattgctgagaagacgccacgtgtctc-aaaaaaggggtcataatcgcaactttttgagaagataa 407  Q
    |||| |||| ||| |||||||||||||| |||||| ||| ||||||||| ||| |||||||||||  |||||||    
T  6285261 cgttgcaaagttgttgagaagacgccacatgtctcgaaataaggggtcaaaattgcaactttttgtaaagataa 6285334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 14601797 - 14601748
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttg 297  Q
    ||||||||||||  |||||  |||||||||| ||||||||||||||||||    
T  14601797 aggctaaactgcgtttttcaccccctaagttttaaaatgttgcgattttg 14601748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 28552307 - 28552355
Alignment:
Q  251 ctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggt 299  Q
    ||||| ||| ||||||| ||||||||||  |||||||||||||||||||    
T  28552307 ctaaagtgcacttttcgccccctaagtttcaaaatgttgcgattttggt 28552355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 50334719 - 50334767
Alignment:
Q  250 gctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    |||||||| | ||||||| |||||||||| ||||||||||| |||||||    
T  50334719 gctaaactccacttttcgccccctaagttttaaaatgttgcaattttgg 50334767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 51719426 - 51719366
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttatt 307  Q
    ||||||||||| | ||||| ||| ||||||||  |||||||||||||||||| ||| ||||    
T  51719426 taggctaaactccactttttgtcacctaagtttcaaaatgttgcgattttggctccctatt 51719366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 2e-53; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 249 - 468
Target Start/End: Complemental strand, 35475592 - 35475375
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgc 348  Q
    ||||||||||| ||||| |||||||| ||| |||||||||||||||||||| ||||| |        ||||||||||| |||||||| | | ||||||||    
T  35475592 ggctaaactgcactttttgtcccctatgttttaaaatgttgcgattttggtcccttaataaaaaaa-tgacaattttggcccatttcatcctaaaattgc 35475494  T
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaa 448  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||||||||| ||||||| |  ||||||||||||||||||| |||||||    
T  35475493 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgctactttttgtaaagataaggggtcaaaa-aacatatttcccttatgttaggaggtcaaa 35475395  T
Q  449 agaacatatttccctaaaca 468  Q
    ||| ||||||||||||||||    
T  35475394 agagcatatttccctaaaca 35475375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 247 - 468
Target Start/End: Original strand, 43793629 - 43793849
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||||||| ||||||| |||||| ||| |||||||||||||||||||  || ||||        || |||||||| |||||||||| ||||||||    
T  43793629 taggctaaactgcacttttcgccccctatgttttaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccatttcgtcccaaaatt 43793728  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||||||||  || |||||| ||||||| |  ||||||||||||||||||| |||||    
T  43793729 gctgagaagacgccacatgtcccaaaaaaggggtcatattcgcaactttttgtaaatataaggggtcaaaa-aacatatttcccttatgttaggaggtca 43793827  T
Q  447 aaagaacatatttccctaaaca 468  Q
    ||||| ||||||||||||||||    
T  43793828 aaagagcatatttccctaaaca 43793849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 328 - 468
Target Start/End: Original strand, 51291248 - 51291388
Alignment:
Q  328 cccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatattt 427  Q
    ||||||||||  |||||||| |||||||||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||    
T  51291248 cccatttcgtcacaaaattggtgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgagaagataaggggtcaaaagatcatattt 51291347  T
Q  428 cccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  51291348 cccttatgttagggggtcaaaagaacatatttccctaaaca 51291388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 332 - 468
Target Start/End: Complemental strand, 4098878 - 4098742
Alignment:
Q  332 tttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccct 431  Q
    |||||| |||||||||  |||||||||||||||||| ||||||||||| | |||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  4098878 tttcgtcccaaaattgacgagaagacgccacgtgtcccaaaaaaggggccttaattgcaactttttgagaagataaggggtcaaaagatcatatttccct 4098779  T
Q  432 tatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||||||||||||| |||||||||| |||||    
T  4098778 tatgttagggggtcaaaagagcatatttcccaaaaca 4098742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 27018448 - 27018300
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||  | ||||||| |||||||     
T  27018448 caattttggcccatttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaggataaggggtcaaaa- 27018350  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  27018349 aacatatttcccttttgttagggggtcaaaagagcatatttccctaaaca 27018300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 341 - 468
Target Start/End: Original strand, 13397767 - 13397893
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||||    
T  13397767 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttagg 13397865  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||||||||||||    
T  13397866 aggtcaaaagagcatatttccctaaaca 13397893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 248 - 467
Target Start/End: Original strand, 24626221 - 24626438
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||||||| ||||||| || ||||||| ||||||||||||||||||   ||| |||        ||||| ||||| |||  ||||| |||||||||    
T  24626221 aggctaaactgcacttttcgccctctaagttttaaaatgttgcgattttgacccct-attaaaaaaa-tgacatttttggccccattcgtcccaaaattg 24626318  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
     | ||||||| |||| |||| ||||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  | |||||    
T  24626319 ttaagaagacaccacatgtcccaaaacatgggtcataatcacaactttttgagaagataaggagtcaaaagatcatatttcccttatgttattgagtcaa 24626418  T
Q  448 aagaacatatttccctaaac 467  Q
    |||| |||||||||||||||    
T  24626419 aagagcatatttccctaaac 24626438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 13826489 - 13826637
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||  ||||||||| |||||||     
T  13826489 caattttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagataaggggtcaaaa- 13826587  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||||| |||||||||| |||||||||| |||||    
T  13826588 agcatatttcccttatgttaggaggtcaaaagagcatatttcccgaaaca 13826637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 15058908 - 15059036
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||    
T  15058908 ccaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 15059006  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    || |||||||||| ||||||||||||||||    
T  15059007 ggaggtcaaaagagcatatttccctaaaca 15059036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 247 - 468
Target Start/End: Original strand, 4433181 - 4433401
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||||||| ||||||| |||||| |||  | ||||||||||||||||  |||||||           ||||||||||| ||||| | ||||||||    
T  4433181 taggctaaactgcacttttcgccccctatgtttcataatgttgcgattttggccccttattaaaaaaaaaagcaattttgacctatttcatcccaaaatt 4433280  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    ||| | |||| ||||||||||  | |||||||||||||||| ||||||||||  ||||||||| ||||||| |  |||||| ||||||||||||||||||    
T  4433281 gctcataagatgccacgtgtcctagaaaaggggtcataatcacaactttttgtaaagataaggggtcaaaa-aacatattttccttatgttagggggtca 4433379  T
Q  447 aaagaacatatttccctaaaca 468  Q
    ||||| ||||||||||||||||    
T  4433380 aaagagcatatttccctaaaca 4433401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 19232413 - 19232562
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||| |||||| |||||||||| || |||||||||||||||||||||||||||  ||||||||| || ||||     
T  19232413 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtaaaaaa 19232512  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  19232513 aacatattttccttatgttagggagtcaaaagagcatatttccctaaaca 19232562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 25011969 - 25011821
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| ||||||||||||| |||||| |||||||||| |||||||||| |||||||| ||||||||||  ||||||||| |||||||     
T  25011969 caattttggcccctttcattccaaaattgctcagaagatgccacgtgtcccaaaaaagggatcataatcccaactttttgtaaagataaggggtcaaaa- 25011871  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||  |||||||||||||||||||||||| ||||||||||||||||    
T  25011870 aacatatcccccttatgttagggggtcaaaagagcatatttccctaaaca 25011821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 5304438 - 5304565
Alignment:
Q  340 caaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttag 439  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||  ||||||||| ||||||| |  |||||| |||||||||||    
T  5304438 caaaattgctgagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatattttccttatgttag 5304536  T
Q  440 ggggtcaaaagaacatatttccctaaaca 468  Q
    | |||||||||| ||||||||||||||||    
T  5304537 gaggtcaaaagagcatatttccctaaaca 5304565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 319 - 466
Target Start/End: Complemental strand, 4357486 - 4357340
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| |||  ||| ||| ||||||||||||||||||||| ||||| ||||||| ||| ||||||||||||||||||  ||||||||| |||||||     
T  4357486 caattttggcccccttcattctaaaattgctgagaagacgccaggtgtcccaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaa- 4357388  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaa 466  Q
    |  ||||||||||||||||||  |||||||||| ||||||||||||||    
T  4357387 agcatatttcccttatgttagaaggtcaaaagagcatatttccctaaa 4357340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 318 - 468
Target Start/End: Original strand, 6209308 - 6209459
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaa--ggggtcataatcgcaactttttgagaagataaggagtcaa 415  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||||||| |||||||  | || |||| | |||||||||||||||||||||| ||||     
T  6209308 acaattttggcccctttcgttccaaaattgctgagaagacaccacgtgtcccaaaaaaaggtggccatagttgcaactttttgagaagataaggggtcat 6209407  T
Q  416 aagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||| || |||||||||||||| ||||||||||   |||| |||||||||||    
T  6209408 aagatcatttttcccttatgtta-ggggtcaaaaatgcataattccctaaaca 6209459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 341 - 468
Target Start/End: Original strand, 41877120 - 41877244
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||||||||  ||||  ||||||||| ||||||| |  |||||||||||||||||||    
T  41877120 aaaattgctgaaaagacgccacgtgtcctaaaaaaggggtcataatcgcaac--tttgtaaagataaggggtcaaaa-agcatatttcccttatgttagg 41877216  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||||||||||||    
T  41877217 aggtcaaaagagcatatttccctaaaca 41877244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 246 - 468
Target Start/End: Original strand, 20919332 - 20919550
Alignment:
Q  246 ataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaat 345  Q
    |||||||||||||| ||||||| ||||||||||  |||||||||||||||||||||  ||||        | ||||||||| |   |||||| |||||||    
T  20919332 ataggctaaactgcacttttcgacccctaagtttcaaaatgttgcgattttggttctctattaaaaaaatt-acaattttggctagtttcgtcccaaaat 20919430  T
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtc 445  Q
    ||||||||||||| ||| |||| ||||| |||| |||||||| |||| |||||||||||||||| |||  ||||| |||||| || ||| |||  |||||    
T  20919431 tgctgagaagacgtcacatgtcccaaaagagggatcataatcacaac-ttttgagaagataaggggtcctaagatcatattttcc-tat-ttatagggtc 20919527  T
Q  446 aaaagaacatatttccctaaaca 468  Q
    |||||| ||||||||||||||||    
T  20919528 aaaagagcatatttccctaaaca 20919550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 45633670 - 45633523
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| ||| || ||||||||| |||||| ||||||||||||  |||||| ||||||||||| ||||||||| | ||||||||| ||||||||    
T  45633670 caattttggccccttttgtcccaaaattgttgagaa-acgccacgtgtcctaaaaaaagggtcataatcacaacttttttaaaagataaggggtcaaaag 45633572  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||| |||||||||||| |||||| ||| ||||||||||||||||    
T  45633571 agcatattt-ccttatgttaggcggtcaatagagcatatttccctaaaca 45633523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 336 - 464
Target Start/End: Original strand, 2715804 - 2715930
Alignment:
Q  336 gttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatg 435  Q
    |||||||||| | ||||||||||||||||||| ||||||| ||| ||||||||||||||||||  ||||||||| ||||||| |  ||||||||| ||||    
T  2715804 gttccaaaatggatgagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccatatg 2715902  T
Q  436 ttagggggtcaaaagaacatatttcccta 464  Q
    ||| |||||||||||| ||||||||||||    
T  2715903 tta-ggggtcaaaagatcatatttcccta 2715930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 320 - 431
Target Start/End: Original strand, 36729159 - 36729270
Alignment:
Q  320 aattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaaga 419  Q
    ||||||| ||| |||| | |||||||| ||||||||||||||| |||| |||||||  ||||||||||| |||||||||||||||||||| |||||||||    
T  36729159 aattttggcccctttcatcccaaaattactgagaagacgccacatgtcccaaaaaaaaggtcataatcgaaactttttgagaagataaggggtcaaaaga 36729258  T
Q  420 ttatatttccct 431  Q
    | ||||||||||    
T  36729259 tcatatttccct 36729270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 1588484 - 1588630
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| |||||||| |||| |||||||| |||||||| ||||||  || | |||||||||||||||||  ||||||||| |||||||     
T  1588484 caattttggcccttttctttccaaaactgctaagaagacgtcacgtgtcccaaaaagaggct-ataatcgcaactttttgtaaagataaggggtcaaaaa 1588582  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  1588583 ac-atatttcccttatgttagggg-tcaaaagagcatatttccctaaaca 1588630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 344 - 461
Target Start/End: Complemental strand, 52838436 - 52838321
Alignment:
Q  344 attgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttaggggg 443  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||||||||||||  ||||||||| ||||||| |  ||||||||| ||||||||| ||    
T  52838436 attgctgagaagacgacacgtgtctcaaaaaagggaccataatcgcaactttttgtaaagataagg-gtcaaaa-agcatatttcccgtatgttaggagg 52838339  T
Q  444 tcaaaagaacatatttcc 461  Q
    |||||||| |||||||||    
T  52838338 tcaaaagagcatatttcc 52838321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 349 - 466
Target Start/End: Complemental strand, 23362635 - 23362519
Alignment:
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaa 448  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||||||  ||||||| ||| | ||| |  |||||| ||||||||||  ||||||||    
T  23362635 tgagaagacgcaatgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataa-gagactaaaaagcatattttccttatgttaaagggtcaaa 23362537  T
Q  449 agaacatatttccctaaa 466  Q
    ||||||||||||||||||    
T  23362536 agaacatatttccctaaa 23362519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 251 - 463
Target Start/End: Complemental strand, 41034936 - 41034727
Alignment:
Q  251 ctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgctg 350  Q
    ||||||||  ||||||||||||||  || ||||||||||| |||||||| || ||||        |  |||||||| ||| |||| |  ||||||| | |    
T  41034936 ctaaactgtacttttcgtcccctatattttaaaatgttgcaattttggtcccctattaaaaaaaatagcaattttggcccctttcat--caaaattaccg 41034839  T
Q  351 agaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaag 450  Q
    ||||||||||||||||  ||||||||||   |||||||||||||||||  || |||||| ||||||| |  ||||||||||||||||||| |||||||||    
T  41034838 agaagacgccacgtgttccaaaaaagggactataatcgcaactttttgtaaaaataaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaag 41034740  T
Q  451 aacatatttccct 463  Q
    | |||||||||||    
T  41034739 atcatatttccct 41034727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 341 - 446
Target Start/End: Original strand, 25618720 - 25618824
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||||| ||||||||  ||||||||| |||||||||  |||||||||| |  |||||    
T  25618720 aaaattgctgagaagacgccacgtgtcccaaaaa-ggggccataatcgccactttttgtaaagataaggggtcaaaagagcatatttccctaaacttagg 25618818  T
Q  441 gggtca 446  Q
    ||||||    
T  25618819 gggtca 25618824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 372 - 468
Target Start/End: Original strand, 9195787 - 9195881
Alignment:
Q  372 aaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||  ||||||||||| ||||||||||||||||    
T  9195787 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta-tgggtcaaaagagcatatttccctaaaca 9195881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 332 - 459
Target Start/End: Complemental strand, 15795538 - 15795412
Alignment:
Q  332 tttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccct 431  Q
    |||||| ||||||||| |||||||||||||| ||||  |||||| ||||||||||| ||||||||||| |||||||   ||||||| |   |||||||||    
T  15795538 tttcgtcccaaaattgatgagaagacgccacatgtcctaaaaaatgggtcataatcccaactttttgaaaagataaaaggtcaaaa-agcctatttccct 15795440  T
Q  432 tatgttagggggtcaaaagaacatattt 459  Q
    ||||||||| | |||||||| |||||||    
T  15795439 tatgttaggagttcaaaagagcatattt 15795412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 353 - 468
Target Start/End: Complemental strand, 55780586 - 55780473
Alignment:
Q  353 aagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaa 452  Q
    |||| ||||||||||  | |||||||||||||||||||||||||||  ||||||||| ||||||| |  |||||| ||||| |||| ||||||||||||     
T  55780586 aagatgccacgtgtcctagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatattttccttaggtta-ggggtcaaaagag 55780489  T
Q  453 catatttccctaaaca 468  Q
    ||||||||||||||||    
T  55780488 catatttccctaaaca 55780473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 353 - 468
Target Start/End: Complemental strand, 55844766 - 55844653
Alignment:
Q  353 aagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaa 452  Q
    |||| ||||||||||  | |||||||||||||||||||||||||||  ||||||||| ||||||| |  |||||| ||||| |||| ||||||||||||     
T  55844766 aagatgccacgtgtcctagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatattttccttaggtta-ggggtcaaaagag 55844669  T
Q  453 catatttccctaaaca 468  Q
    ||||||||||||||||    
T  55844668 catatttccctaaaca 55844653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 332 - 468
Target Start/End: Complemental strand, 15734619 - 15734485
Alignment:
Q  332 tttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatattt-ccc 430  Q
    |||||||||||||||||||||||||||   |||||| ||||||||||| ||| ||| ||||||||||  || || | | ||||||||   |||||| |||    
T  15734619 tttcgttccaaaattgctgagaagacgttgcgtgtcccaaaaaaggggccattatcacaactttttgtaaacatgacgggtcaaaag-gcatatttcccc 15734521  T
Q  431 ttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  15734520 ttatgtta--gggtcaaaagaacatatttccctaaaca 15734485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 6789048 - 6789176
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||| ||||||  ||||||| | ||||||| |  || |||| || ||||||    
T  6789048 ccaaaattgctaagaagacgccacgtgtcccaaaaaaaggggcataatcgcaattttttgtaaagataacgggtcaaaa-aacatttttctctcatgtta 6789146  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    || |||| ||| | ||||||||||||||||    
T  6789147 ggaggtcgaaacagcatatttccctaaaca 6789176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 468
Target Start/End: Complemental strand, 2931525 - 2931407
Alignment:
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
    |||||||||||||||| |||  ||||| |||| || |||||||| ||||||  ||||||||| ||||||| |  |||||||| |||||||| | ||||||    
T  2931525 ctgagaagacgccacg-gtccaaaaaacggggccacaatcgcaattttttgtaaagataaggggtcaaaa-agcatatttcctttatgttatgaggtcaa 2931428  T
Q  448 aagaacatatttccctaaaca 468  Q
    |||| ||||||||||||||||    
T  2931427 aagagcatatttccctaaaca 2931407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 249 - 464
Target Start/End: Complemental strand, 9397493 - 9397281
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgc 348  Q
    ||||||||||| ||||||  |||||||||| |||||||||| ||||||||  || ||||        ||| ||||| | ||| ||| || |||||||||     
T  9397493 ggctaaactgcacttttcaccccctaagttttaaaatgttgggattttggccccctattaaaaaaa-tgaaaatttggcccc-tttagtcccaaaattgt 9397396  T
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaa 448  Q
    |||||| ||| ||||||||  |||||| || |||||||  ||||||||||  ||||||| | || |||| |  |||||||| ||||||||| ||||||||    
T  9397395 tgagaacacggcacgtgtccgaaaaaaagg-tcataatgacaactttttgtaaagataaagggttaaaaaaacatatttcctttatgttagagggtcaaa 9397297  T
Q  449 agaacatatttcccta 464  Q
    ||| ||||||||||||    
T  9397296 agagcatatttcccta 9397281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 249 - 379
Target Start/End: Original strand, 13394536 - 13394666
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgc 348  Q
    ||||||| ||| ||||||| |||||| ||| ||||||||||||||||| |  || ||||        ||||||||||| |||  ||| | | ||||||||    
T  13394536 ggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttagccccctattaaaaaaaatgacaattttggcccccttcatccgaaaattgc 13394635  T
Q  349 tgagaagacgccacgtgtctcaaaaaagggg 379  Q
    ||||||||||||||||||| |||||||||||    
T  13394636 tgagaagacgccacgtgtcccaaaaaagggg 13394666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 47869868 - 47869811
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaacttttt 397  Q
    |||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  47869868 ccaaaattgctgagaagacgccacgtgt-tccaaaaaagggtcataatcgcaacttttt 47869811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 319 - 431
Target Start/End: Complemental strand, 14804553 - 14804441
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||  ||||||  |||||||| |||||| |||||| ||||||||||||||   |||||||| ||| |||||   ||||||||| ||||||||    
T  14804553 caattttggcctctttcgtctcaaaattgttgagaaaacgccatgtgtctcaaaaaagatatcataatcacaagtttttctaaagataaggggtcaaaag 14804454  T
Q  419 attatatttccct 431  Q
    | |||||||||||    
T  14804453 agtatatttccct 14804441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 422 - 468
Target Start/End: Complemental strand, 48158728 - 48158682
Alignment:
Q  422 atatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  48158728 atatttcccttatgttagagggtcaaaagatcatatttccctaaaca 48158682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 346 - 466
Target Start/End: Original strand, 16291777 - 16291898
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataa-tcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggt 444  Q
    |||||||||||||||||||| | ||||| ||||| | ||| || ||||||||||  ||||||||| | ||||||||  ||||||||| | | ||| |||     
T  16291777 tgctgagaagacgccacgtgacccaaaacagggggcctaaatcacaactttttgtaaagataaggggacaaaagatcttatttccctaaagatagagggc 16291876  T
Q  445 caaaagaacatatttccctaaa 466  Q
     |||||| ||||||||||||||    
T  16291877 taaaagagcatatttccctaaa 16291898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 397
Target Start/End: Complemental strand, 33978936 - 33978888
Alignment:
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaacttttt 397  Q
    |||||||  |||||||||| |||||||||||||||||||||||||||||    
T  33978936 tgagaagctgccacgtgtcccaaaaaaggggtcataatcgcaacttttt 33978888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 340 - 407
Target Start/End: Original strand, 12101217 - 12101284
Alignment:
Q  340 caaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataa 407  Q
    ||||| ||||||||||||||||| |||||||||| ||| |||| ||| |||||||||||  |||||||    
T  12101217 caaaactgctgagaagacgccacatgtctcaaaacaggagtcaaaattgcaactttttgtaaagataa 12101284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 1588719 - 1588669
Alignment:
Q  246 ataggctaaactgctcttttcgtcccctaagttataaaatgttgcgatttt 296  Q
    |||||||||||| | ||||||||||| |||||| |||||||||||||||||    
T  1588719 ataggctaaactccacttttcgtcccttaagttttaaaatgttgcgatttt 1588669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 233 - 298
Target Start/End: Complemental strand, 18259431 - 18259366
Alignment:
Q  233 ttattagtttaatataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    |||||||| |||||||||||||||| | ||||||| || |||| ||  ||||||||||||||||||    
T  18259431 ttattagtataatataggctaaacttcacttttcgccctctaaatttcaaaatgttgcgattttgg 18259366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 25011735 - 25011784
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||| | ||||||||||||||||||  ||||||||||||||||||    
T  25011735 ggctaaactccacttttcgtcccctaagtttcaaaatgttgcgattttgg 25011784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 431
Target Start/End: Original strand, 7540189 - 7540272
Alignment:
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttt-tgagaagataaggagtcaaaagattatatttccct 431  Q
    |||||||  |||||||||| |||||||||||||||||||| || |||| ||  ||||||| | |||||||||  ||||||||||    
T  7540189 tgagaagctgccacgtgtcccaaaaaaggggtcataatcggaatttttatgcaaagataaagggtcaaaagagcatatttccct 7540272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 17138587 - 17138540
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgatttt 296  Q
    ||||||||| | ||||||| |||||||||| |||||||||||||||||    
T  17138587 ggctaaactccacttttcgccccctaagttttaaaatgttgcgatttt 17138540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 397
Target Start/End: Complemental strand, 32336032 - 32335981
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaacttttt 397  Q
    |||||||||| ||||||||||  | ||||||||||||||||||||| |||||    
T  32336032 tgctgagaagccgccacgtgttccgaaaaaggggtcataatcgcaatttttt 32335981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 4098960 - 4098911
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||||| ||||| | || ||||||| |||||||||||||||||||    
T  4098960 ggctaaactgcactttttgacctctaagttttaaaatgttgcgattttgg 4098911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 4433485 - 4433437
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||| | ||||||| |||||||||| |||||||||||||||||||    
T  4433485 ggctaaacttcacttttcg-cccctaagttttaaaatgttgcgattttgg 4433437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 24626524 - 24626471
Alignment:
Q  245 tataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||||||||| ||||| |  ||||||||| ||||||||||| |||||||    
T  24626524 tataggctaaactgcactttttgctccctaagttttaaaatgttgcaattttgg 24626471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 2931321 - 2931373
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttc 301  Q
    ||||||||| | ||||||| || ||||||| ||||||||||| ||||||||||    
T  2931321 ggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggttc 2931373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 35475289 - 35475349
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttatt 307  Q
    ||||||||||| |  |||||| || ||||||| ||||||||||||||||||| ||| ||||    
T  35475289 taggctaaacttcatttttcgccctctaagttttaaaatgttgcgattttggctccctatt 35475349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 41877330 - 41877270
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttatt 307  Q
    ||||||||||| | ||||||| || |||||||  |||||||||||||||||| ||| ||||    
T  41877330 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggctccctatt 41877270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 52838231 - 52838279
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttg 297  Q
    ||||||||| | ||||||| || ||||||| ||||||||||||||||||    
T  52838231 ggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttg 52838279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 100; Significance: 4e-49; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 250 - 468
Target Start/End: Complemental strand, 455331 - 455112
Alignment:
Q  250 gctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntg-acaattttgacccatttcgttccaaaattgc 348  Q
    |||||||||| |||||||  |||||||||  ||||||||||||||||||  || ||||        |  ||||||| | ||| |||| | ||||||||||    
T  455331 gctaaactgcacttttcgaaccctaagtttcaaaatgttgcgattttggccccctattaatttttttttacaatttcggcccctttcatcccaaaattgc 455232  T
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaa 448  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||| |||    
T  455231 tgagaagacgccacatgtcccaaaaaatgggtcataatcgcaacttttagagaagataaggggtcaaaagatcatatttcccttatgttagggggttaaa 455132  T
Q  449 agaacatatttccctaaaca 468  Q
    ||||||||||| ||||||||    
T  455131 agaacatattttcctaaaca 455112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 376 - 468
Target Start/End: Complemental strand, 455108 - 455016
Alignment:
Q  376 ggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||||  ||||||| |||||||||||| ||||||||||  ||||||| |||||||||||||| |||||| ||||||||||||||||    
T  455108 ggggtcataatcaaaacttttagagaagataaggggtcaaaagatcgtatttcctttatgttagggggttaaaagagcatatttccctaaaca 455016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 6e-48; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 251 - 468
Target Start/End: Complemental strand, 3208281 - 3208066
Alignment:
Q  251 ctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgctg 350  Q
    ||||||||| ||||||| |||||||||| ||||| ||||||||||| |   | ||||        | ||||||||| | | |||||| |||||||| |||    
T  3208281 ctaaactgcacttttcgacccctaagttttaaaaagttgcgattttagcctcctatttaaaaaaataacaattttggctc-tttcgtcccaaaattactg 3208183  T
Q  351 agaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaag 450  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||| ||||||| || ||||||||||||||||| |||||||||||    
T  3208182 agaagacgccacgtgtcccaaaaaatgggtcataatcgcaactttttaagaagataaggggtcaaaatatcatatttcccttatgtta-ggggtcaaaag 3208084  T
Q  451 aacatatttccctaaaca 468  Q
    ||||||||||||||||||    
T  3208083 aacatatttccctaaaca 3208066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 244 - 468
Target Start/End: Original strand, 19391383 - 19391605
Alignment:
Q  244 atataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaa 343  Q
    |||||||||||||||| ||||||| |||||| |||  |||||||||| |||||||| || ||||        |  |||||||| ||| |||| | | |||    
T  19391383 atataggctaaactgcacttttcg-cccctatgtttcaaaatgttgcaattttggtcccctattaaaaaaaatagcaattttggcccctttcatccaaaa 19391481  T
Q  344 attgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttaggggg 443  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||| ||    
T  19391482 attgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgttaggagg 19391580  T
Q  444 tcaaaagaacatatttccctaaaca 468  Q
    |||||||| ||||||||||||||||    
T  19391581 tcaaaagagcatatttccctaaaca 19391605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 340 - 468
Target Start/End: Complemental strand, 38630268 - 38630141
Alignment:
Q  340 caaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttag 439  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||    
T  38630268 caaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttag 38630170  T
Q  440 ggggtcaaaagaacatatttccctaaaca 468  Q
    | |||||||||| ||||||||||||||||    
T  38630169 gaggtcaaaagagcatatttccctaaaca 38630141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 323 - 468
Target Start/End: Original strand, 18252960 - 18253104
Alignment:
Q  323 tttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagatta 422  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||| ||||| || || ||||||| ||||||||||||||||||||| ||||||| || |    
T  18252960 tttggcccctttcgtcccaaaattgctgagaagacgccacgtgtcccaaaacagtggccataatcacaactttttgagaagataaggggtcaaaaaatca 18253059  T
Q  423 tatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||    
T  18253060 tatttcccttatgtta-tgggtcaaaaaaacatatttccctaaaca 18253104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 242 - 468
Target Start/End: Original strand, 8802393 - 8802617
Alignment:
Q  242 taatataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttcca 341  Q
    |||| ||||||||| ||| ||||||||||| || ||| |||||||||||||||||||  || ||||        || |||||||| |||  ||| | |||    
T  8802393 taatttaggctaaagtgcacttttcgtcccgtatgttttaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatccca 8802492  T
Q  342 aaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttaggg 441  Q
    ||||||||||||||||||||| |||  ||||||||||| ||||||||||||||||||  ||||||||| ||||||  |   ||||||||||||||||||     
T  8802493 aaattgctgagaagacgccacatgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaa--aagctatttcccttatgttagga 8802590  T
Q  442 ggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||| ||||||||||||||||    
T  8802591 ggtcaaaagagcatatttccctaaaca 8802617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 328 - 468
Target Start/End: Original strand, 41688188 - 41688329
Alignment:
Q  328 cccatttcgttccaaaa-ttgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatt 426  Q
    ||||||||||||||||| ||||||||||||| | ||||||| ||||| | ||||||||||||||||||||||||||||||||| ||||||| || | |||    
T  41688188 cccatttcgttccaaaaattgctgagaagacactacgtgtcccaaaacatgggtcataatcgcaactttttgagaagataaggggtcaaaatatcagatt 41688287  T
Q  427 tcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||| ||||||||||||||||||||| |||||||    
T  41688288 tttcttatgttaaggggtcaaaagaacatatttctctaaaca 41688329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 248 - 468
Target Start/End: Complemental strand, 19924570 - 19924351
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||||||| |||||||||||||| ||| ||||||||| | |||||||  |||||||        |   ||||||| ||| |||  |   |||||||    
T  19924570 aggctaaactgcacttttcgtcccctatgttttaaaatgttacaattttggccccttattaaaaaaaattgtaattttggccccttttatcaaaaaattg 19924471  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||| |||||     
T  19924470 ctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttaggaggtcag 19924372  T
Q  448 aagaacatatttccctaaaca 468  Q
    ||||  |||||||||||||||    
T  19924371 aagagtatatttccctaaaca 19924351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 245 - 468
Target Start/End: Original strand, 4807596 - 4807818
Alignment:
Q  245 tataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaa 344  Q
    ||||||||||||||| ||||||| | |||| |||  |||||||||| |||||||  || ||||        |  |||||||| | |||||| | | ||||    
T  4807596 tataggctaaactgcacttttcgcctcctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatagcaattttggcacatttcatccaaaaa 4807695  T
Q  345 ttgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggt 444  Q
    || |||||||||||||||||||  ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||| |||    
T  4807696 ttactgagaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttaggaggt 4807794  T
Q  445 caaaagaacatatttccctaaaca 468  Q
    ||||||||||||||||| ||||||    
T  4807795 caaaagaacatatttccttaaaca 4807818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 320 - 466
Target Start/End: Original strand, 22452244 - 22452389
Alignment:
Q  320 aattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaaga 419  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||| |||  ||| |||||||||||||  ||||||||  ||||||| |    
T  22452244 aattttggcccatttcgtcccaaaattgctgagaagacgccacgtgtcccaaaaaaagggctatattcgcaactttttgtaaagataagaggtcaaaa-a 22452342  T
Q  420 ttatatttcccttatgttagggggtcaaaagaacatatttccctaaa 466  Q
      ||||||||||||||||||| |||||||||| ||||||||||||||    
T  22452343 gcatatttcccttatgttaggaggtcaaaagagcatatttccctaaa 22452389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 4518958 - 4519085
Alignment:
Q  340 caaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttag 439  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||    
T  4518958 caaaattgttgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgttag 4519056  T
Q  440 ggggtcaaaagaacatatttccctaaaca 468  Q
    | | |||||||| ||||||||||||||||    
T  4519057 gagatcaaaagagcatatttccctaaaca 4519085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 248 - 468
Target Start/End: Original strand, 21666273 - 21666492
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||||||| ||||||||||| ||||||   |||||||| |||||| | ||| ||||        || |||||||| |||  |||||  ||||||||    
T  21666273 aggctaaactgcacttttcgtcccttaagtttcgaaatgttgtgattttagctccctattaaaaaaaatggcaattttggcccccttcgtctcaaaattg 21666372  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
    |||||||||||||| ||||| ||||||||||| |||||| |||||||| |   ||||||||| ||||||| |  ||||||||||||||||||||||||||    
T  21666373 ctgagaagacgccatgtgtcccaaaaaaggggccataattgcaactttatctaaagataaggggtcaaaa-aacatatttcccttatgttagggggtcaa 21666471  T
Q  448 aagaacatatttccctaaaca 468  Q
     ||| ||||||||||||||||    
T  21666472 gagagcatatttccctaaaca 21666492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 317 - 468
Target Start/End: Complemental strand, 1824840 - 1824691
Alignment:
Q  317 gacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaa 416  Q
    |||||||||| ||| ||||||  |||||||| ||||||||||||||||||| ||||| | ||  |||| ||||||||||||||||||||||| ||| |||    
T  1824840 gacaattttggcccctttcgtctcaaaattgttgagaagacgccacgtgtcccaaaacaaggc-catactcgcaactttttgagaagataagaagttaaa 1824742  T
Q  417 agattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||| |||||| |||||||||| |||||||||||| ||||||||||||||||    
T  1824741 agatcatattttccttatgtta-ggggtcaaaagagcatatttccctaaaca 1824691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 317 - 468
Target Start/End: Complemental strand, 1859285 - 1859136
Alignment:
Q  317 gacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaa 416  Q
    |||||||||| ||| ||||||  |||||||| ||||||||||||||||||| ||||| | ||  |||| ||||||||||||||||||||||| ||| |||    
T  1859285 gacaattttggcccctttcgtctcaaaattgttgagaagacgccacgtgtcccaaaacaaggc-catactcgcaactttttgagaagataagaagttaaa 1859187  T
Q  417 agattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||| |||||| |||||||||| |||||||||||| ||||||||||||||||    
T  1859186 agatcatattttccttatgtta-ggggtcaaaagagcatatttccctaaaca 1859136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 341 - 468
Target Start/End: Original strand, 5192363 - 5192489
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||  ||||||| |  ||||||||||||||||| |    
T  5192363 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagaggtcaaaa-aacatatttcccttatgttaag 5192461  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||||||||||||    
T  5192462 aggtcaaaagagcatatttccctaaaca 5192489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 247 - 468
Target Start/End: Complemental strand, 33895679 - 33895460
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||||||| ||||||| ||||||  || ||||||||||| |||||||| || ||||        |  |||||||| ||| |||| | | ||||||    
T  33895679 taggctaaactgcacttttcgccccctatattttaaaatgttgcaattttggtcccctattaaaaaaaatagcaattttggcccctttcatccaaaaatt 33895580  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
     |||||||||||||||||||| ||||||| ||| |||||| |||||||||||  ||||||||| || |||| |  ||||||||||||||||||| |||||    
T  33895579 tctgagaagacgccacgtgtc-caaaaaaagggccataattgcaactttttgtaaagataaggggttaaaaaac-atatttcccttatgttaggaggtca 33895482  T
Q  447 aaagaacatatttccctaaaca 468  Q
    ||||| ||||||||||||||||    
T  33895481 aaagagcatatttccctaaaca 33895460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 333 - 468
Target Start/End: Original strand, 4423114 - 4423249
Alignment:
Q  333 ttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccctt 432  Q
    ||||| |||||||||||||||||| ||||| ||| | |||||| ||||||||||||||| ||||||| ||||||||| |||||||||| |||||||||||    
T  4423114 ttcgtcccaaaattgctgagaagatgccacatgt-taaaaaaaagggtcataatcgcaattttttgaaaagataaggggtcaaaagatcatatttccctt 4423212  T
Q  433 atgtta-gggggtcaaaagaacatatttccctaaaca 468  Q
    |||||| || ||| |||||||||||||||| ||||||    
T  4423213 atgttatggaggttaaaagaacatatttccataaaca 4423249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 247 - 468
Target Start/End: Original strand, 18881502 - 18881722
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||||||| ||||||| ||| |||||| | |||||||||||||||||  || ||||        || |||||||| |||  ||||| ||||||||    
T  18881502 taggctaaactgcgcttttcgacccttaagttttgaaatgttgcgattttggccccctattaaaaaaa-tggcaattttggcccccttcgtcccaaaatt 18881600  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    | ||||||||| ||| ||||| |||| ||||||||||||| |||||||||||  ||||||||| |||||||||   |||||||||||||||||  | |||    
T  18881601 gttgagaagacaccaagtgtcccaaataaggggtcataattgcaactttttgtaaagataaggggtcaaaagagcgtatttcccttatgttagaagctca 18881700  T
Q  447 aaagaacatatttccctaaaca 468  Q
    ||| | ||||||||||||||||    
T  18881701 aaatagcatatttccctaaaca 18881722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 341 - 468
Target Start/End: Complemental strand, 17648455 - 17648329
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    |||||||||||||||| ||||||||||  ||||| |||| ||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||||    
T  17648455 aaaattgctgagaagaggccacgtgtcctaaaaagggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttagg 17648357  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||||||||||||    
T  17648356 aggtcaaaagagcatatttccctaaaca 17648329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 12723331 - 12723479
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | | ||||||||||||||||||||| ||||| ||||||||||  ||||||||||||||||||  ||||||| | |||||||     
T  12723331 caattttggcccctttcatgcaaaaattgctgagaagacgccatgtgtcccaaaaaagggaccataatcgcaactttttgtaaagataacgggtcaaaa- 12723429  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||||| |||||||||| |||||||| |||||||    
T  12723430 aacatatttcccttatgttaggaggtcaaaagagcatatttctctaaaca 12723479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 339 - 468
Target Start/End: Complemental strand, 44147184 - 44147057
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||| |||||  ||||||||| ||||||| |  |||||||||||||||||    
T  44147184 ccaaaattgctgagaagacgccatgtatcccaaaaaaggggtcataatcgcaac-ttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 44147087  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    || |||||||| | ||||||||||||||||    
T  44147086 ggaggtcaaaatagcatatttccctaaaca 44147057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 341 - 468
Target Start/End: Original strand, 30784357 - 30784482
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    |||||||||||||||| | |||||||| ||||||||||  ||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||||    
T  30784357 aaaattgctgagaagaagtcacgtgtcccaaaaaagggc-cataatcgcaactttttgtaaagataaggggtcaaaaaac-atatttcccttatgttagg 30784454  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||||||||||||    
T  30784455 aggtcaaaagagcatatttccctaaaca 30784482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 255 - 468
Target Start/End: Original strand, 15869343 - 15869555
Alignment:
Q  255 actgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgaccca-tttcgttccaaaattgctgaga 353  Q
    ||||| ||||||| || |||| || |||||||||||||||||||| || ||||        ||| ||||||| |||  |||| ||| |||||||||||||    
T  15869343 actgcacttttcgccctctaaattttaaaatgttgcgattttggtcccctattaaacaaaatgataattttggccccctttcattctaaaattgctgaga 15869442  T
Q  354 agacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaac 453  Q
    || ||||||||||| ||||| |||||||||||||||||||||||||||||| |    |||||||||| ||||||| |||| |||| | |||||||||| |    
T  15869443 agtcgccacgtgtcccaaaacaggggtcataatcgcaactttttgagaagacagatggtcaaaagatcatatttctctta-gtta-gaggtcaaaagagc 15869540  T
Q  454 atatttccctaaaca 468  Q
    ||||||| |||||||    
T  15869541 atatttctctaaaca 15869555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 32400412 - 32400540
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||| |||||||||||  |||||||   ||||||||   |||||||||||||||||    
T  32400412 ccaaaattgctgagaagacaccacgtgttccaaaaaaggggtcataattgcaactttttgtaaagataaatggtcaaaag-gcatatttcccttatgtta 32400510  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||||  |||||||| |||||||    
T  32400511 gggggtcaaaagcgcatatttcactaaaca 32400540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 318 - 468
Target Start/End: Original strand, 7117183 - 7117333
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    ||||||||| ||| |||||| | |||| ||||||||||||||||| |||| ||||||| ||| |||||| |||||||||||  ||||||||| || ||||    
T  7117183 acaattttggcccctttcgtcctaaaactgctgagaagacgccacatgtcccaaaaaaagggccataattgcaactttttgtaaagataaggggttaaaa 7117282  T
Q  418 gattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||  | ||| ||||| |||||| ||||||||||| |||||||| |||||||    
T  7117283 gaacacattccccttctgttagtgggtcaaaagagcatatttctctaaaca 7117333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 245 - 417
Target Start/End: Complemental strand, 23565397 - 23565225
Alignment:
Q  245 tataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaa 344  Q
    |||||||||||||   ||||||| |||||| ||| ||||||||||| ||||||   || ||||        ||||||||||| ||| |||| | | ||||    
T  23565397 tataggctaaactagacttttcgccccctatgttttaaaatgttgcaattttgaccccctattaaaaaaaatgacaattttggcccctttcatccaaaaa 23565298  T
Q  345 ttgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    |||||||||||||||||| ||| | |||||| ||| ||||||||||||||||||  ||||||||| |||||||    
T  23565297 ttgctgagaagacgccacatgtttaaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaa 23565225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 318 - 468
Target Start/End: Complemental strand, 31268514 - 31268365
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaagggg-tcataatcgcaactttttgagaagataaggagtcaaa 416  Q
    ||||||||| ||| |||||| | ||||||||| |||||||||| | |||| ||||||||||| |||||||| |||||||||   ||||||| | ||| ||    
T  31268514 acaattttggcccctttcgtcctaaaattgctaagaagacgccgcatgtcccaaaaaaggggatcataatcacaactttttataaagataaagggtctaa 31268415  T
Q  417 agattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||  ||| ||||||||||||| |||| ||||||| ||||||||||||||||    
T  31268414 agagcata-ttcccttatgttatgggg-caaaagagcatatttccctaaaca 31268365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 349 - 451
Target Start/End: Original strand, 41385590 - 41385692
Alignment:
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaa 448  Q
    |||||| |||||||||||| ||| | ||| | ||||||| ||||||||||||| ||||||| ||||||| || |||||||||||||||||| | ||||||    
T  41385590 tgagaatacgccacgtgtcccaagacaggtgccataatcacaactttttgagatgataaggggtcaaaaaatcatatttcccttatgttagagagtcaaa 41385689  T
Q  449 aga 451  Q
    |||    
T  41385690 aga 41385692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 396
Target Start/End: Original strand, 17813010 - 17813083
Alignment:
Q  323 tttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttt 396  Q
    |||||||| |||||||||||||||| ||| ||||  |||||||||||||||||| |||||||||||||||||||    
T  17813010 tttgacccctttcgttccaaaattgttgaaaagataccacgtgtctcaaaaaagaggtcataatcgcaactttt 17813083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 422 - 468
Target Start/End: Original strand, 21929975 - 21930021
Alignment:
Q  422 atatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  21929975 atatttcccttatgttaggaggtcaaaagagcatatttccctaaaca 21930021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 378 - 427
Target Start/End: Original strand, 17857061 - 17857110
Alignment:
Q  378 ggtcataatcgcaactttttgagaagataaggagtcaaaagattatattt 427  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||||    
T  17857061 ggtcataatcacaactttttgagaagataaggggtcaaaagatcatattt 17857110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 431
Target Start/End: Complemental strand, 8137721 - 8137635
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaact-ttttgagaagataaggagtcaaaagattatatttccct 431  Q
    |||||||||| ||| ||||||||||||||| | | |||||| |||||| ||||| |||||||||| | |||||||  ||||||||||    
T  8137721 tgctgagaagccgcaacgtgtctcaaaaaatgagccataattgcaactattttgcgaagataagggggcaaaagagcatatttccct 8137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 4519172 - 4519113
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttatt 307  Q
    |||||||||| | |||||||||| |||||||  |||||||||||||||||| ||| ||||    
T  4519172 aggctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggctccctatt 4519113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 374
Target Start/End: Original strand, 21929937 - 21929972
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaa 374  Q
    ||||||||||||||||||||||||||||| ||||||    
T  21929937 ccaaaattgctgagaagacgccacgtgtcccaaaaa 21929972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 307
Target Start/End: Original strand, 33895375 - 33895433
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttatt 307  Q
    ||||||||| | ||||||| || ||||||| ||||||||||| ||||||||||| ||||    
T  33895375 ggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggttccatatt 33895433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 349 - 397
Target Start/End: Complemental strand, 132586 - 132538
Alignment:
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaacttttt 397  Q
    ||||||| ||||||||||| ||||||||||| || ||| ||||||||||    
T  132586 tgagaagccgccacgtgtcccaaaaaaggggccaaaattgcaacttttt 132538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 9e-47; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 318 - 468
Target Start/End: Complemental strand, 26240192 - 26240041
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||||||||  | ||||||||||||||| |||||||||| ||||||||||| |||||||    
T  26240192 acaattttggcccatttcgttccaaaactgccgagaagacgccacgtgtcctataaaaggggtcataattgcaacttttttagaagataaggggtcaaaa 26240093  T
Q  418 gattatatttcccttatgtt-agggggtcaaaagaacatatttccctaaaca 468  Q
    ||| |||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  26240092 gatcatatttcccttatgttaagggggtcaaaagagcatatttccgtaaaca 26240041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 262 - 450
Target Start/End: Original strand, 12291430 - 12291618
Alignment:
Q  262 ttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgctgagaagacgcca 361  Q
    |||||||||||||||||  ||||||||||||||||||  |||||||        || ||||||||  |||||||||  |||||||| |||||||||||||    
T  12291430 ttttcgtcccctaagtttcaaaatgttgcgattttggccccttattaaaaaaaatggcaattttggtccatttcgtcacaaaattgttgagaagacgcca 12291529  T
Q  362 cgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaag 450  Q
     ||||| ||||| ||  ||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||    
T  12291530 tgtgtcccaaaacagatgtcataatcgcaactttttgagaagataaagggtcaaaagatcatatttcccttatgttagggggtcaaaag 12291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 269 - 465
Target Start/End: Complemental strand, 9241934 - 9241742
Alignment:
Q  269 cccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtct 368  Q
    |||||||||| ||||||||||||||||||   |||||||        ||| || |||||||| |||| |||||||||| |||||||| ||||| |||||     
T  9241934 cccctaagttttaaaatgttgcgattttgaccccttattaaaaaa--tgataaatttgacccctttcattccaaaattactgagaaggcgccatgtgtcc 9241837  T
Q  369 caaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaa 465  Q
    ||||| || || ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  9241836 caaaacagagggcataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtta--gggtcaaaagaacatatttccctaa 9241742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 248 - 468
Target Start/End: Complemental strand, 18791663 - 18791443
Alignment:
Q  248 aggctaaactgctcttttcgtcccc-taagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    |||||||| ||| |||||||||||| || ||| |||||||||||||||||||  || ||||        || |||||||| |||  ||| | ||||||||    
T  18791663 aggctaaagtgcacttttcgtccccctatgttttaaaatgttgcgattttggccccctatttaaaaaaatggcaattttggcccccttcatcccaaaatt 18791564  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    | |||||||||||||||||||  |||||||||| ||||||||||||||||||  ||||| ||| ||||||| |  |||||||||||||||||||||||||    
T  18791563 gttgagaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaaagatgaggggtcaaaa-agcatatttcccttatgttagggggtca 18791465  T
Q  447 aaagaacatatttccctaaaca 468  Q
    ||||| ||||||||||||||||    
T  18791464 aaagagcatatttccctaaaca 18791443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 24051242 - 24051094
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| |||||||| | ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||  || |||||| |||||||     
T  24051242 caattttggcccatttcatcccaaaattgatgagaagacgccacgtgtcccaaaaaagaggtcataatcgcaactttttgtaaatataaggggtcaaaa- 24051144  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    | |||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  24051143 agtatatttctcttatgttaggaggtcaaaagagcatatttccctaaaca 24051094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 247 - 468
Target Start/End: Original strand, 35102489 - 35102709
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||| ||| ||||||| |||||| |||  |||||||||||||||| |  || ||||        || |||||||| |||  ||| | ||||||||    
T  35102489 taggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttagccccctattaaaaaaaatggcaattttggcccccttcatcccaaaatt 35102588  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    ||||||||||||||||||||| ||||||||||| |||||| |||||||||||  ||||||||| ||||||| |  ||||||||||||||||||| |||||    
T  35102589 gctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttaggaggtca 35102687  T
Q  447 aaagaacatatttccctaaaca 468  Q
    ||||| ||||||||||||||||    
T  35102688 aaagagcatatttccctaaaca 35102709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 244 - 468
Target Start/End: Original strand, 4597400 - 4597623
Alignment:
Q  244 atataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaa 343  Q
    ||||||| |||| ||| ||||||| |||||| |||  ||||||||||||||||||| || ||||        ||||||||||| |||  |||   |||||    
T  4597400 atataggataaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtcccctattaaaaaaaatgacaattttggcccccttcaacccaaa 4597499  T
Q  344 attgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttaggggg 443  Q
    ||| |||| |||||||||| |||| ||||||||||| |||||| |||||||||||  ||||||||| ||||||| |  ||||||||||||||||||| ||    
T  4597500 attactgaaaagacgccacatgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgttaggagg 4597598  T
Q  444 tcaaaagaacatatttccctaaaca 468  Q
    |||||||| ||||||||||||||||    
T  4597599 tcaaaagagcatatttccctaaaca 4597623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 341 - 468
Target Start/End: Complemental strand, 25819896 - 25819770
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||||    
T  25819896 aaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttagg 25819798  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     ||||| ||||  |||||||||||||||    
T  25819797 aggtcagaagagtatatttccctaaaca 25819770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 318 - 460
Target Start/End: Complemental strand, 32451961 - 32451820
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    ||||||||| ||| |||| | | ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||| |||||||    
T  32451961 acaattttggcccctttcatccaaaaattgttgagaagacgccacatgtctcaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa 32451862  T
Q  418 gattatatttcccttatgttagggggtcaaaagaacatatttc 460  Q
     |  ||||||||||||||||||| |||||||||| ||||||||    
T  32451861 -agcatatttcccttatgttaggaggtcaaaagagcatatttc 32451820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 339 - 468
Target Start/End: Complemental strand, 24603575 - 24603447
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||||||||||||||||| |||||  |||||||||| ||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||    
T  24603575 ccaaaattgctgagaagacgccatgtgtccaaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 24603477  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    || |||||||||| ||||||||||||||||    
T  24603476 ggaggtcaaaagagcatatttccctaaaca 24603447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 34834159 - 34834011
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| |||| ||| | ||||||||||||||||||||||||||||| ||||||||||| |||||| | |||||||||  ||||||| | |||||||     
T  34834159 caattttggcccacttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgtaactttttgtaaagataacgggtcaaaa- 34834061  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  34834060 aacatatttcccttatgttaggaggtcaaaagagcatatttccctaaaca 34834011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 318 - 468
Target Start/End: Original strand, 22968225 - 22968372
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    ||||||||| ||| |||| | ||||||||||| |||||| | ||||||||||| ||||||| |||||||||||||||||||  ||||||||| |||||||    
T  22968225 acaattttggcccctttcatcccaaaattgctcagaagatgtcacgtgtctcagaaaaggg-tcataatcgcaactttttgtaaagataagg-gtcaaaa 22968322  T
Q  418 gattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
     |  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  22968323 aac-atatttcccttatgttagggggtcaaaagagcatatttccctaaaca 22968372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 318 - 468
Target Start/End: Complemental strand, 23820168 - 23820021
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    ||||||||| ||| |||| | ||||||||||| |||||| | ||||||||||| ||||||| |||||||||||||||||||  ||||||||| |||||||    
T  23820168 acaattttggcccctttcatcccaaaattgctcagaagatgtcacgtgtctcagaaaaggg-tcataatcgcaactttttgtaaagataagg-gtcaaaa 23820071  T
Q  418 gattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
     |  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  23820070 aac-atatttcccttatgttagggggtcaaaagagcatatttccctaaaca 23820021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 26710397 - 26710525
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    |||||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  |||||| ||||||||||    
T  26710397 ccaaaattactgagaagatgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-aacatattttccttatgtta 26710495  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    || |||||||||| ||||||||||||||||    
T  26710496 ggaggtcaaaagagcatatttccctaaaca 26710525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 31211028 - 31210880
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||||||||||| ||||||||| ||||||||| |  |||||||||||||||||  ||||||||| |||||||     
T  31211028 caattttggcccctttcatcccaaaattgctgagaagacaccacgtgtcccaaaaaaggtgctataatcgcaactttttgtaaagataaggggtcaaaa- 31210930  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||||| |||||||||| ||||||| ||||||||    
T  31210929 agcatatttcccttatgttaggaggtcaaaagagcatattttcctaaaca 31210880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 332 - 468
Target Start/End: Original strand, 16415415 - 16415549
Alignment:
Q  332 tttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccct 431  Q
    |||||| |||||||||||||||||||| || || ||| |||||| |||| |||||||||||||||| ||||||||||  ||||||| || ||||||||||    
T  16415415 tttcgtcccaaaattgctgagaagacgacatgt-tct-aaaaaatgggttataatcgcaacttttttagaagataagcggtcaaaatatcatatttccct 16415512  T
Q  432 tatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  16415513 tatgttaggcggtcaaaagaatatatttccctaaaca 16415549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 318 - 468
Target Start/End: Complemental strand, 3118914 - 3118765
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    ||||||||| ||| |||| | ||||||||| | |||||| | |||||||| || |||||||||||||||||||| ||||||  ||||||||  |||||||    
T  3118914 acaattttggcccctttcatcccaaaattgatcagaagatgtcacgtgtcccagaaaaggggtcataatcgcaaatttttgtaaagataagaggtcaaaa 3118815  T
Q  418 gattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
     |  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  3118814 aac-atatttcccttatgttagggggtcaaaagagcatatttccctaaaca 3118765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 374 - 468
Target Start/End: Original strand, 4013791 - 4013885
Alignment:
Q  374 aaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||| |||||||||||| |||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  4013791 aaggggccataatcgcaacattttgagaagataaggggtcaaaagatcatatttcccttatattagggggtcaaaagagcatatttccctaaaca 4013885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 359 - 468
Target Start/End: Complemental strand, 8412952 - 8412844
Alignment:
Q  359 ccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatt 458  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||||||||||||||| ||||||    
T  8412952 ccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgttagggggtcaaaagagcatatt 8412854  T
Q  459 tccctaaaca 468  Q
    || |||||||    
T  8412853 tctctaaaca 8412844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 323 - 468
Target Start/End: Complemental strand, 22269636 - 22269493
Alignment:
Q  323 tttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagatta 422  Q
    |||| ||| ||||||  |||||||| ||||||||||||||||||| ||||||||||| ||||| | ||||||||||  ||||||||| ||||||| |  |    
T  22269636 tttggcccctttcgtctcaaaattgttgagaagacgccacgtgtcccaaaaaaggggccataaacacaactttttgtaaagataaggggtcaaaa-aaca 22269538  T
Q  423 tatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  22269537 tatttcccttatgtta-agggtcaaaagaacatatttccctaaaca 22269493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 316 - 449
Target Start/End: Complemental strand, 34528385 - 34528252
Alignment:
Q  316 tgacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaa 415  Q
    ||||||||||| ||| |||||| |||||||||||||||||||  ||| |||| ||||| ||  | ||||||||||||||||||||||||||||| |||||    
T  34528385 tgacaattttggcccctttcgtcccaaaattgctgagaagacatcacatgtcccaaaacagtcgccataatcgcaactttttgagaagataaggggtcaa 34528286  T
Q  416 aagattatatttcccttatgttagggggtcaaaa 449  Q
    ||||| |||||||  ||||||||||||| |||||    
T  34528285 aagatcatatttcatttatgttagggggccaaaa 34528252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 253 - 468
Target Start/End: Original strand, 14572182 - 14572396
Alignment:
Q  253 aaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgctgag 352  Q
    ||||||| ||||||| |||||| ||| ||||||||||| |||||||  || ||||        |  |||||||| ||| |||| | | ||||||||||||    
T  14572182 aaactgcacttttcgccccctatgttttaaaatgttgcaattttggccccctattaaaaaaaatagcaattttggcccctttcatccaaaaattgctgag 14572281  T
Q  353 aagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaa 452  Q
    |||| ||||| |||| ||||||| ||| |||||||||||||||||   ||||||||| ||||||| |  |||||||||||||||||||  |||||||||     
T  14572282 aagatgccacatgtcccaaaaaaagggccataatcgcaactttttataaagataaggggtcaaaa-agcatatttcccttatgttaggatgtcaaaagag 14572380  T
Q  453 catatttccctaaaca 468  Q
    ||||||||||||||||    
T  14572381 catatttccctaaaca 14572396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 319 - 419
Target Start/End: Original strand, 20863798 - 20863898
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||| | ||| |||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||||    
T  20863798 caatttcggcccttttcgttccaaaattgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaag 20863897  T
Q  419 a 419  Q
    |    
T  20863898 a 20863898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 340 - 468
Target Start/End: Complemental strand, 15298697 - 15298571
Alignment:
Q  340 caaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttag 439  Q
    ||||||||||||||||||||||| |||| |||||||||   ||||||||||||||||||  |||||||||  |||||| |  |||||| |||||||||||    
T  15298697 caaaattgctgagaagacgccacttgtcccaaaaaaggac-cataatcgcaactttttgtaaagataagggatcaaaaaac-atattttccttatgttag 15298600  T
Q  440 ggggtcaaaagaacatatttccctaaaca 468  Q
    | |||||||||| ||||||||||||||||    
T  15298599 gaggtcaaaagagcatatttccctaaaca 15298571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 246 - 463
Target Start/End: Original strand, 18749094 - 18749309
Alignment:
Q  246 ataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaat 345  Q
    |||||||||||||| ||||||| ||| || ||| ||||||||||| |||||||  || ||||         | |||||||| ||| |||| | | |||||    
T  18749094 ataggctaaactgcacttttcgccccttatgttttaaaatgttgcaattttggccccctattaaaaaaatag-caattttggcccctttcatacaaaaat 18749192  T
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtc 445  Q
    || | |||||| ||||| |||| ||||||||||| ||||||| ||||||||||  ||||||||| ||||||| |  ||||||||||||||||| | ||||    
T  18749193 tgataagaagaagccacatgtcccaaaaaaggggacataatcacaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttatgaggtc 18749291  T
Q  446 aaaagaacatatttccct 463  Q
    ||| ||||||||||||||    
T  18749292 aaatgaacatatttccct 18749309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 331 - 468
Target Start/End: Original strand, 19282295 - 19282429
Alignment:
Q  331 atttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccc 430  Q
    ||||||| |||||||||||||||||| | ||| ||||   ||||||||||||||||||||||||||||| ||||||||| |||||||    |||||||||    
T  19282295 atttcgtcccaaaattgctgagaagaagtcacatgtcc--aaaaaggggtcataatcgcaactttttgaaaagataaggggtcaaaa-tgcatatttccc 19282391  T
Q  431 ttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||| | |||||| | ||||||| | ||||||    
T  19282392 ttatgttaggagttcaaaatagcatatttacttaaaca 19282429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 333 - 419
Target Start/End: Original strand, 23124804 - 23124890
Alignment:
Q  333 ttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaaga 419  Q
    ||||| ||||| |||||||||||||||||| ||||   ||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  23124804 ttcgtcccaaacttgctgagaagacgccacatgtcctcaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaga 23124890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 468
Target Start/End: Complemental strand, 4371127 - 4370984
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    ||||||||| ||| |||| |  ||||||||||||||| ||||||  |||| |||||||      | | |||||||||||||  ||||||||| ||||||     
T  4371127 acaattttggcccctttcatctcaaaattgctgagaaaacgccatatgtcccaaaaaa------aaagtcgcaactttttgtaaagataaggggtcaaag 4371034  T
Q  418 gattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||  ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  4371033 gagcatatttcccttatgtta-ggggtcaaaagagcatatttccctaaaca 4370984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 468
Target Start/End: Complemental strand, 12427468 - 12427317
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaact-ttttgagaagataaggagtcaaa 416  Q
    ||||||||| ||  ||||||  ||||||||||||||||| | |||||||| |||| || |||||| |||||||||| |||||  ||||||| | || |||    
T  12427468 acaattttggcctctttcgtcgcaaaattgctgagaagatggcacgtgtcccaaagaatgggtcaaaatcgcaacttttttgtaaagataaagggtaaaa 12427369  T
Q  417 agattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    | |  |||||||| ||||||||  || |||||||| ||||||||||||||||    
T  12427368 aaaacatatttcctttatgttaatggttcaaaagagcatatttccctaaaca 12427317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 318 - 466
Target Start/End: Complemental strand, 2637013 - 2636865
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaagggg-tcataatcgcaactttttgagaagataaggagtcaaa 416  Q
    ||||||||| ||| |||||| | |||||||  ||||||||||||| |||  | | ||||||| |||||||||||||||||||  || |||||| ||||||    
T  2637013 acaattttggcccctttcgtcctaaaattgaagagaagacgccacatgttcctagaaagggggtcataatcgcaactttttgtaaaaataaggggtcaaa 2636914  T
Q  417 agattatatttcccttatgttagggggtcaaaagaacatatttccctaaa 466  Q
    | |  |||||| |||||||||| |||| ||||| ||||||||| ||||||    
T  2636913 atagcatatttaccttatgtta-ggggacaaaaaaacatattttcctaaa 2636865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 336 - 468
Target Start/End: Complemental strand, 14195776 - 14195644
Alignment:
Q  336 gttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatg 435  Q
    ||||||||||||||||| ||||||||||| ||  |||||| | | ||||||||||||||||||  || |||||| |  ||||||  |||||||||| |||    
T  14195776 gttccaaaattgctgagtagacgccacgtttcaaaaaaaaagtg-cataatcgcaactttttgtaaaaataaggggctaaaagaccatatttccctcatg 14195678  T
Q  436 ttagggggtc-aaaagaacatatttccctaaaca 468  Q
    |||| | ||| |||||||||||||||||| ||||    
T  14195677 ttagagagtcaaaaagaacatatttcccttaaca 14195644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 249 - 468
Target Start/End: Original strand, 2058834 - 2059040
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgc 348  Q
    ||||||||||| ||||| | | | ||| || ||||||||||||||||| | ||| ||||        || |||||||| ||  ||||||  |||||||||    
T  2058834 ggctaaactgcactttttgcctcgtaaattttaaaatgttgcgattttagctccctatttataaaaatggcaattttggccattttcgtctcaaaattgc 2058933  T
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaa 448  Q
    ||||||||||| || ||||  |||| ||||||||||||| ||||||||| |||||||             || |||||||||||||||||||| ||||||    
T  2058934 tgagaagacgctacatgtcctaaaacaggggtcataatcccaacttttttagaagat-------------atcatatttcccttatgttagggtgtcaaa 2059020  T
Q  449 agaacatatttccctaaaca 468  Q
    | | ||||||||||||||||    
T  2059021 atagcatatttccctaaaca 2059040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 8149036 - 8149126
Alignment:
Q  375 aggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaa 466  Q
    |||||| ||||||| |||||||| | |||||||||||||||||||| ||||||||| |||||||  |||||||||||  |||||||| ||||    
T  8149036 aggggttataatcgtaactttttaa-aagataaggagtcaaaagatcatatttcccctatgttaaagggtcaaaagattatatttccttaaa 8149126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 332 - 465
Target Start/End: Original strand, 24615776 - 24615908
Alignment:
Q  332 tttcgttccaaaattgctgagaagacgccacgtgtctcaaaaa-aggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccc 430  Q
    |||||| | |||||||||||||| ||||||| |||| |||||| | |||||||||||||||||||| |  |||| || | ||||||| |  ||||||| |    
T  24615776 tttcgtccaaaaattgctgagaaaacgccacatgtcccaaaaataagggtcataatcgcaacttttagtaaagagaatgggtcaaaa-agcatatttctc 24615874  T
Q  431 ttatgttagggggtcaaaagaacatatttccctaa 465  Q
     ||||||| |||||||||||| |||||||||||||    
T  24615875 atatgtta-ggggtcaaaagagcatatttccctaa 24615908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 4013968 - 4013920
Alignment:
Q  250 gctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    |||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  4013968 gctaaactgcacttttcgtcccctaagtttcaaaatgttgcgattttgg 4013920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 468
Target Start/End: Original strand, 18749300 - 18749346
Alignment:
Q  422 atatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||    
T  18749300 atatttcccttatgttaagaggtcaaaagagcatatttccctaaaca 18749346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 468
Target Start/End: Original strand, 32682419 - 32682496
Alignment:
Q  390 aactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||  ||||||||| ||||||| |  |||||||| |||||||| | |||||||||| ||||||||||||||||    
T  32682419 aactttttgtaaagataaggggtcaaaaaac-atatttcctttatgttatgaggtcaaaagagcatatttccctaaaca 32682496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 18791356 - 18791407
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||||| | ||||||| || ||||||| |||||||||||||||||||    
T  18791356 taggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgg 18791407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 31210793 - 31210843
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    |||||||||| | ||||||| || ||||||| |||||||||||||||||||    
T  31210793 aggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgg 31210843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 464
Target Start/End: Original strand, 11661010 - 11661135
Alignment:
Q  340 caaaattgctgagaagacgccacgtgtctcaaaa-aaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||| |||| ||||||| |||| |||| ||||| |||||| || |||||||||||||||  ||||||||| |  ||||||  |||||||| | | | ||    
T  11661010 caaaactgcttagaagacaccacatgtcccaaaataaggggccaaaatcgcaactttttgtaaagataagggggaaaaagagcatatttccttaaagata 11661109  T
Q  439 gggggtcaaaagaacatatttcccta 464  Q
    | |||  | |||||||||||||||||    
T  11661110 gaggggtacaagaacatatttcccta 11661135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 22269410 - 22269459
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||||| |||||||||| |||||||  ||||| ||||||||||||    
T  22269410 ggctaaactgcacttttcgtcctctaagtttcaaaatattgcgattttgg 22269459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 25819988 - 25819939
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||||| |||||||||||||| ||| ||||||||| | |||||||    
T  25819988 ggctaaactgcacttttcgtcccctatgttttaaaatgttacaattttgg 25819939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 247 - 468
Target Start/End: Original strand, 26628023 - 26628243
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||||| | ||||||| |||||| |||  |||||||||| |||||||  || ||||        || |||||||| ||| |||| | ||||||||    
T  26628023 taggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaattttggcccctttcatcccaaaatt 26628122  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||| |||||    
T  26628123 gctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttaggaggtca 26628221  T
Q  447 aaagaacatatttccctaaaca 468  Q
    ||||| ||||||||||||||||    
T  26628222 aaagagcatatttccctaaaca 26628243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 250 - 468
Target Start/End: Original strand, 40836181 - 40836397
Alignment:
Q  250 gctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgct 349  Q
    |||||||| | |||||||||||||||||| |||||||||||||||||||| |  ||||        || | |||||| ||| ||||||||||||||||||    
T  40836181 gctaaactacacttttcgtcccctaagttttaaaatgttgcgattttggtcctctattaaaaaaa-tg-cgattttggcccctttcgttccaaaattgct 40836278  T
Q  350 gagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgaga-agataaggagtcaaaagattatatttcccttatgttagggggtcaaa 448  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||||||  || | |||||| ||||||| |  ||||||||||||| |||||||||||||    
T  40836279 gagaagccgccacgtgtcccaaaaaaggggccataatcgcaactttttttgagatataaggggtcaaaa-aacatatttcccttatattagggggtcaaa 40836377  T
Q  449 agaacatatttccctaaaca 468  Q
    ||||||||||||||||||||    
T  40836378 agaacatatttccctaaaca 40836397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 48907362 - 48907510
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||   ||||||||| |||||||     
T  48907362 caattttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttttaaagataaggggtcaaaa- 48907460  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  48907461 agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaaca 48907510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 319 - 467
Target Start/End: Original strand, 3328883 - 3329030
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | | ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||||    
T  3328883 caattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaag 3328982  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaac 467  Q
       ||||||||||||||||||| |||||||||| |||||||||||||||    
T  3328983 -gcatatttcccttatgttaggaggtcaaaagagcatatttccctaaac 3329030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 248 - 468
Target Start/End: Complemental strand, 20002012 - 20001795
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||||||| |||||| |||||||||||  ||||||||||||||||||  || ||||         | |||||||| ||| |||| | |||||||||    
T  20002012 aggctaaactgcacttttc-tcccctaagtttcaaaatgttgcgattttggccccctattaaaaaaatag-caattttgccccttttcatcccaaaattg 20001915  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
     ||||||||||||||||||  ||||| ||||| |||| ||||||||||||||||| |||||| | ||| |||| ||||||||||||||||||||||||||    
T  20001914 ttgagaagacgccacgtgttccaaaacaggggccatagtcgcaactttttgagaatataagg-ggcaagagatcatatttcccttatgttagggggtcaa 20001816  T
Q  448 aagaacatatttccctaaaca 468  Q
    |||| ||||||||||||||||    
T  20001815 aagagcatatttccctaaaca 20001795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 247 - 467
Target Start/End: Original strand, 34878527 - 34878746
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||||||| ||| ||| |||||| |||  ||||||||||||||||||  || ||||        || ||||||||||||||||| |  |||||||    
T  34878527 taggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttgacccatttcatctcaaaatt 34878626  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    ||||||||||||||||||||| ||||||||| | |||||| | |||||||||  |||||||||  |||||| |  ||||||||||||| |||||||||||    
T  34878627 gctgagaagacgccacgtgtcccaaaaaaggtgccataattgaaactttttgtaaagataagggatcaaaa-agcatatttcccttatattagggggtca 34878725  T
Q  447 aaagaacatatttccctaaac 467  Q
    ||||| |||||||||||||||    
T  34878726 aaagagcatatttccctaaac 34878746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 321 - 468
Target Start/End: Original strand, 23428691 - 23428837
Alignment:
Q  321 attttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagat 420  Q
    |||||| ||| |||| | ||||||||||| |||||| |||||||||| || |||||||||||||||||||||||||||  ||||||||| ||||||| |     
T  23428691 attttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aa 23428789  T
Q  421 tatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||||||||||||||||||||||| ||||||||||||||||    
T  23428790 catatttcccttatgttagggggtcaaaagagcatatttccctaaaca 23428837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 339 - 468
Target Start/End: Complemental strand, 8542824 - 8542696
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||  ||||||||| ||||||| |  |||||||||||||||||    
T  8542824 ccaaaattgctgagaagacgccacgtgtcacaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 8542726  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    || |||||||||| ||||||||||||||||    
T  8542725 ggaggtcaaaagagcatatttccctaaaca 8542696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 28173799 - 28173947
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | |||||||||||  ||||| |||||||||| || |||||||||||||||||||||||||||  ||||||||| |||||||     
T  28173799 caattttggcccctttcatcccaaaattgctcggaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 28173897  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  28173898 aacatatttcccttatgttagggggtcaaaagagcatatttccctaaaca 28173947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 33279655 - 33279803
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||||||| ||| || | ||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||  || ||||||  |||||||    
T  33279655 caattttgacccctttggtccaaaaattgctgagaagacgccacgtgtctcaaaaaaagggtcataatcgtaac-ttttgtaaatataagggatcaaaag 33279753  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||||||||||||||||||||||||||| ||||||| ||||||||    
T  33279754 agcatatttcccttatgttagggggtcaaaagagcatattttcctaaaca 33279803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 251 - 468
Target Start/End: Complemental strand, 32315219 - 32315005
Alignment:
Q  251 ctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgctg 350  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||| || ||| |||        |||||||||||   | |||||| ||||||||| ||    
T  32315219 ctaaactgcacttttcgtcccttaagttttaaaatgttgcgattttcgtccct-attaaaaaaa-tgacaattttgggtcctttcgtcccaaaattgttg 32315122  T
Q  351 agaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaag 450  Q
    |||||||||||| ||||  |||| | ||| ||| |||||| ||||||||| |||||||| ||||||| || |||||||||| ||||||||||||||||||    
T  32315121 agaagacgccacatgtcctaaaacatgggccat-atcgcagctttttgaggagataaggggtcaaaatataatatttccctcatgttagggggtcaaaag 32315023  T
Q  451 aacatatttccctaaaca 468  Q
    ||||||||||||||||||    
T  32315022 aacatatttccctaaaca 32315005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 249 - 468
Target Start/End: Original strand, 28154882 - 28155100
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgc 348  Q
    ||||||||| | ||||||| |||||| |||  |||||||||| |||||||  || ||||        || |||||||| ||| |||| | | ||||||||    
T  28154882 ggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaattttggcccctttcatccaaaaattgc 28154981  T
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaa 448  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||||||||  ||||||||  ||||||| |  ||||||||||||||||||| |||||||    
T  28154982 tgagaagacgccacgtgtcccaaaaaaagggccataatcgcaactttttgtaaagataagaggtcaaaa-agcatatttcccttatgttaggaggtcaaa 28155080  T
Q  449 agaacatatttccctaaaca 468  Q
    ||| ||||||||||||||||    
T  28155081 agagcatatttccctaaaca 28155100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 4522188 - 4522040
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | | ||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||  ||||||||| |||||||     
T  4522188 caattttggcccctttcatcctaaaattgctgagaagacgccacgtgtcccaaaaaaggggcaataatcgcaactttttgtaaagataaggggtcaaaa- 4522090  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||| | |||||||||| ||||||||||||||||    
T  4522089 agcatatttcccttatgttaagaggtcaaaagagcatatttccctaaaca 4522040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 341 - 550
Target Start/End: Complemental strand, 3781090 - 3780879
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||  ||||||| | ||||||| |  ||||||||||||||||| |    
T  3781090 aaaattgctgagaagacaccacgtgtcccaaaaaaggggtcatattcgcaactttttgtaaagataaagggtcaaaa-agcatatttcccttatgtta-g 3780993  T
Q  441 gggtcaaaagaacatatttccctaaaca----gtcacttttaccannnnnnnaaatatgggtcaaaatcgcaacatttt-aaacctaaggggcagaaaat 535  Q
    ||||||||||| ||||||||||||||||    ||||||||| |||        |||| ||||||||||||||||||||| |||| || || ||| |||||    
T  3780992 gggtcaaaagagcatatttccctaaacatggggtcacttttgccattttttt-aataggggtcaaaatcgcaacattttgaaacttagggagcaaaaaat 3780894  T
Q  536 gcaatttagccttta 550  Q
    ||| |||||||||||    
T  3780893 gcattttagccttta 3780879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 316 - 468
Target Start/End: Complemental strand, 22416571 - 22416419
Alignment:
Q  316 tgacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaa 415  Q
    ||||||||||| |||  ||||| ||||||||| ||||||||||||||||||| |||| ||||||||||||| |||||||||||  ||||||| | |||||    
T  22416571 tgacaattttggcccccttcgtcccaaaattgttgagaagacgccacgtgtcccaaataaggggtcataattgcaactttttgtaaagataatgggtcaa 22416472  T
Q  416 aagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||  |||||| |||||||||||  |||||||||| ||||| ||||||||||    
T  22416471 aagagcatatttaccttatgttagaaggtcaaaagagcatatatccctaaaca 22416419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 247 - 466
Target Start/End: Complemental strand, 13081200 - 13080982
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||| ||| ||||||| | |||| |||  ||||||||||||||||||  || ||||        || |||||||| |||  ||| | ||||||||    
T  13081200 taggctaaagtgcgcttttcgcctcctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatcccaaaatt 13081101  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    ||||||||||| |||| |||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||| | |||||    
T  13081100 gctgagaagactccacatgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttatgaggtca 13081002  T
Q  447 aaagaacatatttccctaaa 466  Q
    ||||| ||||||||||||||    
T  13081001 aaagagcatatttccctaaa 13080982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 261 - 468
Target Start/End: Complemental strand, 23320652 - 23320447
Alignment:
Q  261 cttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgctgagaagacgcc 360  Q
    ||||||| || ||||||| |||||||||||||||||| | || ||||        | ||||||||| ||| |||||| ||||||||||||| ||||||||    
T  23320652 cttttcgaccactaagttttaaaatgttgcgattttgatcccctattaaaaaaaattacaattttggcccctttcgtcccaaaattgctgaaaagacgcc 23320553  T
Q  361 acgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttc 460  Q
    || |||| |||||| |||| |||||| ||||||||||||||||||||| |||||| | || | | ||| ||||||||| |||||||||||| ||||||||    
T  23320552 acatgtcccaaaaa-ggggccataatagcaactttttgagaagataagaagtcaatatatcagacttctcttatgtta-ggggtcaaaagagcatatttc 23320455  T
Q  461 cctaaaca 468  Q
    ||||||||    
T  23320454 cctaaaca 23320447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 341 - 468
Target Start/End: Original strand, 30155237 - 30155363
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    |||||||||| |||||||||| ||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||||    
T  30155237 aaaattgctgcgaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgttagg 30155335  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||||||||||||    
T  30155336 aggtcaaaagagcatatttccctaaaca 30155363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 247 - 468
Target Start/End: Complemental strand, 1743555 - 1743335
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||||||| |||||||  ||||||||| |||||||||||||||||||| || ||||        |  |||||||   || ||| ||  |||||||    
T  1743555 taggctaaactgcacttttcgctccctaagttttaaaatgttgcgattttggtcccctattataaaaaatagcaattttagtcccttttgtcacaaaatt 1743456  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    |||||||||||||||| |||| ||||| |  || | | ||||||||||||||||||||||||| |||||||||| | |||| ||||||||||||||||||    
T  1743455 gctgagaagacgccacatgtcccaaaacaatggcccttatcgcaactttttgagaagataaggggtcaaaagatcacattt-ccttatgttagggggtca 1743357  T
Q  447 aaagaacatatttccctaaaca 468  Q
    |||||  |||||| ||||||||    
T  1743356 aaagagtatattttcctaaaca 1743335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 25022733 - 25022881
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||| |||||| |||||||||| || |||||||||||||||||||||||||||  |||||||||  ||||||     
T  25022733 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataagggttcaaaa- 25022831  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||| |||||||||||| |||||||||||| ||||||||||||||||    
T  25022832 aacatatatcccttatgttatggggtcaaaagagcatatttccctaaaca 25022881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 27852842 - 27852969
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||| ||||||||||||||||||| |||||| |||| ||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||    
T  27852842 ccaaaattgttgagaagacgccacgtgtcccaaaaa-ggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 27852939  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    || |||||||||| ||||||||||||||||    
T  27852940 ggaggtcaaaagagcatatttccctaaaca 27852969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 249 - 468
Target Start/End: Original strand, 8338940 - 8339158
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgc 348  Q
    ||||||| ||| ||||||| |||||| |||  |||||||||||||||||   || ||||        || |||||||| |||  ||| | ||||||||||    
T  8338940 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgc 8339039  T
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaa 448  Q
    ||||||||||||||||||| |||||||| || ||||||||||||||||||  ||||||||| ||||||| |  |||||||  |||||||||| |||||||    
T  8339040 tgagaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttctattatgttaggaggtcaaa 8339138  T
Q  449 agaacatatttccctaaaca 468  Q
    | | ||||||||||||||||    
T  8339139 aaagcatatttccctaaaca 8339158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 244 - 468
Target Start/End: Complemental strand, 25179884 - 25179664
Alignment:
Q  244 atataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaa 343  Q
    |||||||||||| ||| ||||||| |||||| |||  ||||||||||||| ||||  |||||||        || ||||| || |||  ||| | |||||    
T  25179884 atataggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgatattggccccttattaaaaaaa-tggcaattatggcccccttcatcccaaa 25179786  T
Q  344 attgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttaggggg 443  Q
    |||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  ||||||| |||| |||||| ||    
T  25179785 attgctgagaagacgcc--gtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttctcttacgttaggagg 25179689  T
Q  444 tcaaaagaacatatttccctaaaca 468  Q
    |||||||| ||||||||||||||||    
T  25179688 tcaaaagagcatatttccctaaaca 25179664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 319 - 466
Target Start/End: Complemental strand, 36311385 - 36311238
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||||| ||||||||| |||||||| |||||||||| ||||| | ||| | ||||||||||| ||||||||||||||| || ||||     
T  36311385 caattttggcccctttcgtcccaaaattgttgagaagaagccacgtgtcccaaaatatgggccgtaatcgcaactatttgagaagataaggggttaaaat 36311286  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaa 466  Q
     | ||||||||||||||||| ||||||||||||  |||||| ||||||    
T  36311285 gtcatatttcccttatgttatggggtcaaaagagtatattttcctaaa 36311238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 46673117 - 46673265
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaac-tttttgagaagataaggagtcaaaa 417  Q
    |||||||| ||| |||| | ||||||||||| |||||| ||||||||||  | ||||||||||||||||||||| ||||||  ||||||||| ||||||     
T  46673117 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcctagaaaaggggtcataatcgcaacttttttgtaaagataaggggtcaaa- 46673215  T
Q  418 gattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
     |  |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  46673216 -aacatatttcccttatgttagggagtcaaaagagcatatttccctaaaca 46673265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 10743641 - 10743494
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||| | |||| |||||||| | || |||||||||||||||||||||||||||  ||||||||| |||||||     
T  10743641 caattttggcccctttcatcccaaaattgctcaaaagatgccacgtgacccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 10743543  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  10743542 aacatatttcccttatgtta-ggggttaaaagagcatatttccctaaaca 10743494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 340 - 466
Target Start/End: Complemental strand, 25336569 - 25336443
Alignment:
Q  340 caaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttag 439  Q
    |||||||||||| |||||| | | |||||||||| || ||  |||||||||||||||||||||| |||   |||||||| | ||||||||||||||||||    
T  25336569 caaaattgctgaaaagacgtcgcatgtctcaaaacagaggcaataatcgcaactttttgagaagttaaaaggtcaaaaggtcatatttcccttatgttag 25336470  T
Q  440 ggggtcaaaagaacatatttccctaaa 466  Q
    |||||||||||| |||| |||||||||    
T  25336469 ggggtcaaaagagcataattccctaaa 25336443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 248 - 466
Target Start/End: Original strand, 26633360 - 26633574
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||||||||   || ||||        || | | |||| ||| |||||| | |||||||    
T  26633360 aggctaaactgcacttttcg-cccctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatg-cgactttggcccctttcgtccaaaaattg 26633457  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
    | ||||||  |||||||| | ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  ||||||| ||||||||| ||||||||    
T  26633458 ccgagaaggtgccacgtgccccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttctcttatgtta-ggggtcaa 26633555  T
Q  448 aagaacatatttccctaaa 466  Q
    |||| ||||||||||||||    
T  26633556 aagagcatatttccctaaa 26633574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 26126976 - 26127124
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| || | |||||  |||||||||||||||||||||||  |||  ||||||| || ||||||||||||||||||  ||||||||| | |||||     
T  26126976 caattttggcctacttcgtcgcaaaattgctgagaagacgccacaagtccaaaaaaagaggccataatcgcaactttttgtaaagataaggggccaaaa- 26127074  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  26127075 agcatatttcccctatgttagagggtcaaaataacatatttccctaaaca 26127124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 26177026 - 26177174
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| || ||||||| |||||||||||||||||| |||||  ||| |||||||| || ||||||||||||||||||  ||||||| ||| |||||     
T  26177026 caattttggcctatttcgtcccaaaattgctgagaagaagccacaagtcccaaaaaagaggccataatcgcaactttttgtaaagataatgagccaaaa- 26177124  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||| |||||||| ||||||||| | ||||||||||| ||||    
T  26177125 agcatatttcccctatgttagagggtcaaaatagcatatttccctgaaca 26177174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 247 - 468
Target Start/End: Original strand, 22447738 - 22447962
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||||||| ||||||| |||||| |||  |||||||||| |||||||  || ||||        |  ||||||||  || |||| | | ||||||    
T  22447738 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatagcaattttggaccctttcatccaaaaatt 22447837  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagata----aggagtcaaaagattatatttcccttatgttagggg 442  Q
     ||||||||||||||||| ||  |||||||||| ||||||||||||||||||  ||||||    ||| ||||||| |  ||||||||||||||||||| |    
T  22447838 tctgagaagacgccacgtatccaaaaaaaggggccataatcgcaactttttgtaaagatatataaggggtcaaaa-agcatatttcccttatgttaggag 22447936  T
Q  443 gtcaaaagaacatatttccctaaaca 468  Q
    ||||||||| ||||||||||||||||    
T  22447937 gtcaaaagagcatatttccctaaaca 22447962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 341 - 468
Target Start/End: Original strand, 22500687 - 22500813
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    |||||| ||||||||||||||||||||  |||||||||  ||||||||||||||||||  || ||||||  |||||| |  |||||||||||||||||||    
T  22500687 aaaatttctgagaagacgccacgtgtccaaaaaaagggaccataatcgcaactttttgtaaatataagggatcaaaa-agcatatttcccttatgttagg 22500785  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||| ||||||||    
T  22500786 aggtcaaaagagcatattttcctaaaca 22500813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 341 - 431
Target Start/End: Complemental strand, 3821094 - 3821004
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccct 431  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||  ||||||| | |||||||||  ||||||||||    
T  3821094 aaaattgctgagaagacaccacatgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaagggtcaaaagagcatatttccct 3821004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 339 - 417
Target Start/End: Complemental strand, 6927684 - 6927606
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||  ||||||||| |||||||    
T  6927684 ccaaaattgctcagaagatgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa 6927606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 48860937 - 48860788
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaa-aaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    |||||||||||  |||| | |||||||| || |||||| |||||||| | | | ||||||| |||||||||||||||||||  ||||||||| |||||||    
T  48860937 caattttgaccattttcatcccaaaattactcagaagatgccacgtgcccccagaaaagggatcataatcgcaactttttgtaaagataaggggtcaaaa 48860838  T
Q  418 gattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
     |  ||||||||||||||||||  |||||||| | ||||||||||||||||    
T  48860837 aac-atatttcccttatgttagaaggtcaaaatagcatatttccctaaaca 48860788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 332 - 468
Target Start/End: Original strand, 31039060 - 31039195
Alignment:
Q  332 tttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccct 431  Q
    |||||| | |||||||||||||||||||||| |||   ||||||||||  |||||||||||||||| ||||||||| | ||||  |||| |||||||||     
T  31039060 tttcgtccaaaaattgctgagaagacgccacatgttctaaaaaaggggctataatcgcaactttttaagaagataaagggtcattagatcatatttccca 31039159  T
Q  432 tatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||| |||||||||||| ||| ||| ||| ||||    
T  31039160 tatgtta-ggggtcaaaagagcatgttttccttaaca 31039195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 381 - 468
Target Start/End: Complemental strand, 4776023 - 4775936
Alignment:
Q  381 cataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||||||||| |||||||||||  ||||| ||| ||||||||| ||||| |||||||||||| | ||||||||||||||||    
T  4776023 cataatcgcaactttttaagaagataagggatcaaaggatcatatttcccgtatgtgagggggtcaaaatagcatatttccctaaaca 4775936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 35201085 - 35201212
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||| |||||||| ||||| ||||  |||| ||| | ||| |||| |||||||||||||||||||| ||||||| || |||||||| ||||||||    
T  35201085 ccaaaattgttgagaagatgccacatgtcctaaaacaggagccatgatcgtaactttttgagaagataaggggtcaaaatatcatatttcctttatgtta 35201184  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
      ||||||||||| ||| |||||| |||||    
T  35201185 --gggtcaaaagagcatgtttcccaaaaca 35201212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 33105175 - 33105027
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| || ||||| | ||||||||| ||||||||||||||||||| ||||| | |||  ||||||| ||||||||| ||||| ||||  ||||||     
T  33105175 caattttggcctatttcatcccaaaattgatgagaagacgccacgtgtcccaaaacatgggaaataatcgaaactttttgggaagaaaagggatcaaaat 33105076  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||| |||||| || | | |||||||| ||||||||||||||||    
T  33105075 aacatatttctcttatgata-gagatcaaaagagcatatttccctaaaca 33105027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 319 - 417
Target Start/End: Original strand, 32960713 - 32960810
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    |||||||| ||| |||| | |||||||| |||||||||||||||||||| |||||||  || ||||||||||||||||||  ||||||||| |||||||    
T  32960713 caattttggcccctttcatcccaaaattactgagaagacgccacgtgtcccaaaaaa-aggccataatcgcaactttttgtaaagataaggggtcaaaa 32960810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 43668641 - 43668583
Alignment:
Q  340 caaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttg 398  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  43668641 caaaattgctgagaagacgccacatgtcccaaaacaggggtcataatcgcaactttttg 43668583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 46387651 - 46387792
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| |||||||| |  |||||||| ||||||||||||| ||||  ||||||||||| |||||| || | ||||||  ||||||||| |||         
T  46387651 caattttggcccatttcatctcaaaattgatgagaagacgccatgtgttccaaaaaaggggccataattgctagtttttggaaagataaggggtc----- 46387745  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
       ||||||||||||||||||||| |||||||| ||| ||||| ||||||    
T  46387746 ---atatttcccttatgttaggggatcaaaagagcatgtttccttaaaca 46387792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 36311150 - 36311201
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  36311150 taggctaaactgcacttttcgtcccctaagttttaaaatgttgcgattttgg 36311201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 321 - 407
Target Start/End: Original strand, 20626794 - 20626880
Alignment:
Q  321 attttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataa 407  Q
    |||||| ||| ||||| |||||||||| | |||||||||||| |||| ||||||||| |||||||||| |||||||||  |||||||    
T  20626794 attttggcccctttcgctccaaaattgttaagaagacgccacatgtcccaaaaaaggagtcataatcgtaactttttgtaaagataa 20626880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 346 - 431
Target Start/End: Original strand, 32463516 - 32463602
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaac-tttttgagaagataaggagtcaaaagattatatttccct 431  Q
    |||||||||| ||||||||||| ||||||| |||||| ||||||||| ||||||  ||||||||| ||||||||| | |||||||||    
T  32463516 tgctgagaagccgccacgtgtcccaaaaaaagggtcaaaatcgcaacttttttgtaaagataaggggtcaaaagactgtatttccct 32463602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 345 - 468
Target Start/End: Original strand, 9496312 - 9496435
Alignment:
Q  345 ttgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaacttttt-gagaagataaggagtcaaaagattatatttcccttatgttaggggg 443  Q
    ||||||||| |||||||| || | ||||| | |||||||  |||||||||||| |  ||||||||| | ||||| |  |||||||| ||||||||| |||    
T  9496312 ttgctgagaggacgccacatgccccaaaacaagggtcatcctcgcaacttttttgtaaagataaggggacaaaa-agcatatttcctttatgttagaggg 9496410  T
Q  444 tcaaaagaacatatttccctaaaca 468  Q
    |||||||| ||||||||||||||||    
T  9496411 tcaaaagagcatatttccctaaaca 9496435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 10743408 - 10743458
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  10743408 aggctaaactcctcttttcgccccctaagttttaaaatgttgcgattttgg 10743458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 411 - 466
Target Start/End: Original strand, 49657942 - 49657996
Alignment:
Q  411 gtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaa 466  Q
    |||||||||| |||||| |||||||||| |||||||||||| ||||||||||||||    
T  49657942 gtcaaaagatcatattttccttatgtta-ggggtcaaaagagcatatttccctaaa 49657996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 40836484 - 40836434
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttg 297  Q
    |||||||||||||  |||||| |||||||||| ||||||||||||||||||    
T  40836484 taggctaaactgcatttttcgccccctaagttttaaaatgttgcgattttg 40836434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 25179575 - 25179627
Alignment:
Q  246 ataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    |||||||||||| | ||||||| || ||||||| |||||||||||||||||||    
T  25179575 ataggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgg 25179627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 397
Target Start/End: Original strand, 48743228 - 48743279
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaacttttt 397  Q
    |||||||||| |||||| |||| |||||||||||||| |||| |||||||||    
T  48743228 tgctgagaagccgccacatgtcccaaaaaaggggtcaaaatcacaacttttt 48743279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 49657861 - 49657936
Alignment:
Q  317 gacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaac 392  Q
    |||||||||  |||||||| | ||||||||||||||| |||| || |||||  |||| ||||| ||||||||||||    
T  49657861 gacaattttagcccatttcatcccaaaattgctgagatgacgtcatgtgtcataaaacaggggccataatcgcaac 49657936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 33279890 - 33279840
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttg 297  Q
    ||||||| ||||  ||||||| |||||||||| ||||||||||||||||||    
T  33279890 taggctagactgaacttttcgccccctaagttttaaaatgttgcgattttg 33279840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 550
Target Start/End: Complemental strand, 3820974 - 3820913
Alignment:
Q  490 aatatgggtcaaaatcgcaacattttaaacctaaggg-gcagaaaatgcaatttagccttta 550  Q
    |||| |||||||||||||||||||||||| || |||| ||| ||| |||| |||||||||||    
T  3820974 aataggggtcaaaatcgcaacattttaaaacttagggagcaaaaagtgcattttagccttta 3820913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 20626751 - 20626800
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||||  ||||||||||||||||||  |||||||| |||||||||    
T  20626751 ggctaaactgtacttttcgtcccctaagtttcaaaatgttacgattttgg 20626800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 548
Target Start/End: Complemental strand, 26633412 - 26633359
Alignment:
Q  495 gggtcaaaatcgcaacattttaaacctaaggggcagaaaatgcaatttagcctt 548  Q
    |||||||||||||||||||||||| || ||||||  ||| |||| |||||||||    
T  26633412 gggtcaaaatcgcaacattttaaaacttaggggcgaaaagtgcagtttagcctt 26633359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 466
Target Start/End: Original strand, 34296531 - 34296596
Alignment:
Q  401 aagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaa 466  Q
    ||||||| | |||||||||  |||||||| | | ||||| ||||||||||| ||||||||||||||    
T  34296531 aagataaagggtcaaaagagcatatttccataaagttagagggtcaaaagagcatatttccctaaa 34296596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 392 - 468
Target Start/End: Original strand, 18388842 - 18388918
Alignment:
Q  392 ctttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||| ||||| |||||  ||| ||||  ||||||  |||||| ||||||||||||||| ||||||||||| ||||    
T  18388842 cttttttagaagctaagggatcagaagaacatatttatcttatggtagggggtcaaaagagcatatttcccttaaca 18388918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 250 - 466
Target Start/End: Complemental strand, 112429 - 112214
Alignment:
Q  250 gctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgct 349  Q
    |||||||| | |||||||||||| ||||| ||||||||||| ||||||| ||||||||        | ||||||||| ||  |||||| | ||||||||     
T  112429 gctaaactacacttttcgtccccaaagttttaaaatgttgcaattttggctccttattaaaaaaatt-acaattttggcctttttcgtcctaaaattgca 112331  T
Q  350 gagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaa 449  Q
    ||||||||||||| |||| ||||||| ||  ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  112330 gagaagacgccacatgtcccaaaaaatggaccataaccgcaactttttgagaagataaggagtcaaaagatcatatttcccttatgttaggaggtcaaaa 112231  T
Q  450 gaacatatttccctaaa 466  Q
       ||||||||||||||    
T  112230 aggcatatttccctaaa 112214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 5e-45; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 316 - 468
Target Start/End: Complemental strand, 24464813 - 24464661
Alignment:
Q  316 tgacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaa 415  Q
    ||||||||||| |||  ||| ||| |||||||||||||||||||||| |||| ||||| |  |  |||||||||||| |||||||||||||||| |||||    
T  24464813 tgacaattttgtcccccttcattctaaaattgctgagaagacgccacatgtcacaaaacaatgaccataatcgcaacattttgagaagataaggggtcaa 24464714  T
Q  416 aagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24464713 aagatcatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 24464661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 240 - 463
Target Start/End: Complemental strand, 15681943 - 15681720
Alignment:
Q  240 tttaatataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttc 339  Q
    |||||| | ||||||||||| ||||| | ||||||||||  ||||||||||||||||||   | || |        | ||||||||| ||| |||||| |    
T  15681943 tttaattttggctaaactgcacttttagacccctaagtttcaaaatgttgcgattttggcctcctaataaaaaaaattacaattttggcccctttcgtcc 15681844  T
Q  340 caaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttag 439  Q
    |||||||  ||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||||||| |||||||||| ||| ||||||||||||||    
T  15681843 caaaatttatgagaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttgacaagataaggggtcaaaagatcatagttcccttatgttag 15681744  T
Q  440 ggggtcaaaagaacatatttccct 463  Q
    |||||||||||| |||| ||||||    
T  15681743 ggggtcaaaagatcatagttccct 15681720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 248 - 468
Target Start/End: Complemental strand, 39182238 - 39182021
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||||||| ||||||| ||||||||||  |||||||||| ||||||   || ||||        ||||||||||| ||| ||| || |||||||||    
T  39182238 aggctaaactgcacttttcgccccctaagtttaaaaatgttgcaattttgaccccctattaaaaaaa-tgacaattttggccccttttgtcccaaaattg 39182140  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
    ||||||| || ||||||||| ||||| || || ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||   ||||||    
T  39182139 ctgagaaaacaccacgtgtcccaaaacagaggccataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtta--tggtcaa 39182042  T
Q  448 aagaacatatttccctaaaca 468  Q
    |||| ||||||||||||||||    
T  39182041 aagagcatatttccctaaaca 39182021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 320 - 467
Target Start/End: Complemental strand, 4193783 - 4193637
Alignment:
Q  320 aattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaaga 419  Q
    ||||||| ||| |||| ||||||||||||||| |||||| |||||||||||||||||||| |||||| |||||||||||| ||||||||| |||||||||    
T  4193783 aattttggcccctttccttccaaaattgctgaaaagacgtcacgtgtctcaaaaaaggggccataattgcaactttttgaaaagataaggggtcaaaaga 4193684  T
Q  420 ttatatttcccttatgttagggggtcaaaagaacatatttccctaaac 467  Q
    | ||||||| |||||||||  ||||||||||| |||||||||||||||    
T  4193683 tcatatttctcttatgtta-agggtcaaaagagcatatttccctaaac 4193637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 248 - 468
Target Start/End: Complemental strand, 25003010 - 25002793
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||||||  ||||||| |||||||||| |||||||||||||||||||| |||||||        ||||||||||| ||| |||  | ||||| |||    
T  25003010 aggctaaactgtacttttcgccccctaagttttaaaatgttgcgattttggtcccttattaaaaaa--tgacaattttggccccttttatcccaaagttg 25002913  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
    || ||| ||||||| ||||| ||||| | ||||||||||||||| ||| ||||||||||||| |||||||||| |||||||| |||||||| ||||||||    
T  25002912 ctaagaggacgccatgtgtcccaaaacacgggtcataatcgcaaatttatgagaagataaggggtcaaaagatcatatttcctttatgtta-ggggtcaa 25002814  T
Q  448 aagaacatatttccctaaaca 468  Q
    |||| ||| ||||||||||||    
T  25002813 aagagcatgtttccctaaaca 25002793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 318 - 464
Target Start/End: Original strand, 3403120 - 3403266
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    ||||||||| ||| |||||| |||||||| ||||| ||||||||| |||| |||||||| |||||||||||||| |||||||||| ||||||  ||||||    
T  3403120 acaattttggcccctttcgtcccaaaattcctgaggagacgccacatgtcccaaaaaagtggtcataatcgcaagtttttgagaacataagggatcaaaa 3403219  T
Q  418 gattatatttcccttatgttagggggtcaaaagaacatatttcccta 464  Q
    ||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  3403220 gatcatatttcccttatgttagggggtcaaaagagcatattttccta 3403266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 339 - 468
Target Start/End: Complemental strand, 20636833 - 20636705
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||    
T  20636833 ccaaaattgctgagaaaacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 20636735  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    || |||||||||| ||||||||||||||||    
T  20636734 ggaggtcaaaagagcatatttccctaaaca 20636705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 21224422 - 21224570
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | | ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||||| |||||||     
T  21224422 caattttggcccctttcatccaaaaattgctgagaagacgccacgtgtctcaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaa- 21224520  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  21224521 agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaaca 21224570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 318 - 446
Target Start/End: Original strand, 9822169 - 9822296
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    ||||||||  ||| |||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  9822169 acaattttagcccctttcgtcccaaaattgctgagaagacgccatgtgtcccaaaa-aggggtcataatcgcaactttttgagaagataaggggtcaaaa 9822267  T
Q  418 gattatatttcccttatgttagggggtca 446  Q
    |||  ||||||||||||||||||||||||    
T  9822268 gatcgtatttcccttatgttagggggtca 9822296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 318 - 446
Target Start/End: Original strand, 10724094 - 10724221
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    ||||||||  ||| |||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  10724094 acaattttagcccctttcgtcccaaaattgctgagaagacgccatgtgtcccaaaa-aggggtcataatcgcaactttttgagaagataaggggtcaaaa 10724192  T
Q  418 gattatatttcccttatgttagggggtca 446  Q
    |||  ||||||||||||||||||||||||    
T  10724193 gatcgtatttcccttatgttagggggtca 10724221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 316 - 468
Target Start/End: Original strand, 36746570 - 36746721
Alignment:
Q  316 tgacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaa 415  Q
    ||||||||||| ||| |||| | ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||| || ||    
T  36746570 tgacaattttggcccctttcatcccaaaattgttgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggttaa 36746669  T
Q  416 aagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||   ||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  36746670 aag-gcatatttctcttatgttaggaggtcaaaagagcatatttccctaaaca 36746721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 270 - 431
Target Start/End: Complemental strand, 6650793 - 6650632
Alignment:
Q  270 ccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctc 369  Q
    ||||||||| ||||||||||||||| |||| |||||||        ||||||||||  ||| |||||| ||||||||| |||||||||||||| ||||||    
T  6650793 ccctaagttttaaaatgttgcgattgtggtcccttattaaaaaatatgacaattttagcccctttcgtcccaaaattgatgagaagacgccacatgtctc 6650694  T
Q  370 aaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccct 431  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||||||  ||||||||||    
T  6650693 aaaacaggggccataatcgcaactttttgagaagataaggggtcaaaagagcatatttccct 6650632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 24597605 - 24597733
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||  |||| |||| ||||||| |  |||||||||||||||||    
T  24597605 ccaaaattgctgagaagacgccacgtgtctcaaacaaggggccataatcgcaactttttgtaaagagaaggggtcaaaa-aacatatttcccttatgtta 24597703  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    || |||||||||| ||||||||||||||||    
T  24597704 ggaggtcaaaagagcatatttccctaaaca 24597733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 26126488 - 26126340
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||| | ||| ||| ||||||||||||| ||||||| | | |||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  26126488 caatttcggccccttttgttccaaaattgcagagaagatgtctcgtgtcccaaaacaggggccataatcgcaactttttgagaagataaggggtcaaaag 26126389  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    || ||||||||||||||||| |||||||||| | ||||||||||||||||    
T  26126388 atcatatttcccttatgtta-ggggtcaaaaaagcatatttccctaaaca 26126340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 27869285 - 27869413
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||    
T  27869285 ccaaaattgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 27869383  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    || |||||||||| ||||||||||||||||    
T  27869384 ggaggtcaaaagagcatatttccctaaaca 27869413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 349 - 468
Target Start/End: Original strand, 35337622 - 35337740
Alignment:
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaa 448  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||| |||||||    
T  35337622 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttaggaggtcaaa 35337720  T
Q  449 agaacatatttccctaaaca 468  Q
    ||| ||||||||||||||||    
T  35337721 agagcatatttccctaaaca 35337740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 31494144 - 31493996
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | | ||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||  ||||||||| |||||||     
T  31494144 caattttggcccctttcatcctaaaattgctgagaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa- 31494046  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  31494045 agcatattttccttatgttagagggtcaaaagagcatatttccctaaaca 31493996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 41452319 - 41452467
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | | |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||  ||||||||| |||||||     
T  41452319 caattttggcccctttcatccaaaaattgctgagaagacgacacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 41452417  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||||| ||||| ||||  |||||||||||||||    
T  41452418 agcatatttcccttatgttaggaggtcagaagagtatatttccctaaaca 41452467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 48176033 - 48176180
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||| |||||| |||||||||| || |||||||||||||||||||||||||||  ||||||||| |||||||     
T  48176033 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 48176131  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  48176132 aacatatttcccttatgtta-ggggtcaaaagagcatatttccctaaaca 48176180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 248 - 468
Target Start/End: Complemental strand, 42271637 - 42271418
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||| ||| ||||||| |||||| ||| ||||||||||| ||||| |  || ||||        ||||||||||| |||  ||| | | |||||||    
T  42271637 aggctaaagtgcacttttcgccccctatgttttaaaatgttgcaatttttgccccctattaaaaaaaatgacaattttggcccccttcatccgaaaattg 42271538  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
    |||||||||||||||||||  ||||||| ||| ||||||||||||||||||  || |||||| ||||||| |  ||||||||||||||||||| ||||||    
T  42271537 ctgagaagacgccacgtgttccaaaaaaagggccataatcgcaactttttgtaaacataaggggtcaaaa-agcatatttcccttatgttaggaggtcaa 42271439  T
Q  448 aagaacatatttccctaaaca 468  Q
    |||| ||||||||||||||||    
T  42271438 aagagcatatttccctaaaca 42271418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 341 - 468
Target Start/End: Complemental strand, 2331225 - 2331099
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    |||||||||||||||||||||| |||| |||||||  || ||||||||||||||||||  ||||||||||||||||| |  |||||||||||||||||||    
T  2331225 aaaattgctgagaagacgccacttgtcccaaaaaataggccataatcgcaactttttgtaaagataaggagtcaaaa-agcatatttcccttatgttagg 2331127  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||||||||||||    
T  2331126 aggtcaaaagagcatatttccctaaaca 2331099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 345 - 468
Target Start/End: Original strand, 3562529 - 3562651
Alignment:
Q  345 ttgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggt 444  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||| |||    
T  3562529 ttgctgagaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttaggaggt 3562627  T
Q  445 caaaagaacatatttccctaaaca 468  Q
    ||||||| ||||||||||||||||    
T  3562628 caaaagagcatatttccctaaaca 3562651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 319 - 457
Target Start/End: Original strand, 39440189 - 39440328
Alignment:
Q  319 caattttgaccca-tttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    ||||||||||||  |||||||  ||||||| |||||||||||||| ||||  |||| ||||||||||||||||||||||||| |||||||||  ||||||    
T  39440189 caattttgaccccctttcgttttaaaattgttgagaagacgccacatgtcctaaaacaggggtcataatcgcaactttttgaaaagataagggatcaaaa 39440288  T
Q  418 gattatatttcccttatgttagggggtcaaaagaacatat 457  Q
    ||| ||||||||||||||||||| |||||||||| |||||    
T  39440289 gatcatatttcccttatgttaggaggtcaaaagatcatat 39440328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 247 - 434
Target Start/End: Complemental strand, 42303452 - 42303266
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||||||| ||| ||| ||||||||||  |||| |||||||||||||| |  ||||        ||||||||||| ||| ||| ||  |||||||    
T  42303452 taggctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttaaaaaaatgacaattttggccccttttgtctcaaaatt 42303353  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttat 434  Q
    ||||||||||| ||||||||| |||||| |||||||| ||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  42303352 gctgagaagacaccacgtgtcccaaaaa-ggggtcatgatcgcaagtttttgagaagataaggggtcaaaagatcatatttcccttat 42303266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 247 - 468
Target Start/End: Complemental strand, 26385567 - 26385347
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    |||| |||||||| ||||  | ||||||||||  ||||||||||||||||||  || ||||        ||||||||||| ||| ||| || | ||||||    
T  26385567 taggataaactgcactttctgccccctaagtttcaaaatgttgcgattttggccccctatttataaaaatgacaattttggccccttttgtcctaaaatt 26385468  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    ||| | |||||||||| |||| ||||| | ||| ||||||||||||||||||||||||||||  ||||||| || ||||||| ||||||||| |||||||    
T  26385467 gctaataagacgccacatgtcccaaaacatgggccataatcgcaactttttgagaagataagaggtcaaaatatcatatttctcttatgtta-ggggtca 26385369  T
Q  447 aaagaacatatttccctaaaca 468  Q
    ||| | ||||||||||||||||    
T  26385368 aaatagcatatttccctaaaca 26385347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 33237503 - 33237632
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||||||||||||||||||||||| ||||| || |||||||||| ||||||||| ||||| ||||| ||||||| || ||||| ||||||| |||    
T  33237503 ccaaaattgctgagaagacgccacgtgtcccaaaacagtggtcataatcacaacttttttagaaggtaaggggtcaaaatatcatattacccttatttta 33237602  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    |||||| |||||| |||||| |||||||||    
T  33237603 gggggtgaaaagagcatattgccctaaaca 33237632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 248 - 468
Target Start/End: Original strand, 11843177 - 11843395
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattg 347  Q
    |||||||||||| ||| ||| |||||| |||  |||||||||||||||||| ||| ||||        || |||||||| ||| |||| | |||||||||    
T  11843177 aggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaattttggcccctttcatcccaaaattg 11843276  T
Q  348 ctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
    ||||||||||||||||| |   |||||||||| |||||| |||||||||||  | ||||||| ||||||| |  |||||| |||||||||| ||||||||    
T  11843277 ctgagaagacgccacgtattcaaaaaaaggggccataattgcaactttttgtaaggataaggggtcaaaa-agcatattttccttatgtta-ggggtcaa 11843374  T
Q  448 aagaacatatttccctaaaca 468  Q
    |||| ||||||||||||||||    
T  11843375 aagagcatatttccctaaaca 11843395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 316 - 431
Target Start/End: Complemental strand, 5087233 - 5087118
Alignment:
Q  316 tgacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaa 415  Q
    ||||||||||| ||| |||||| ||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||||||| ||||||||| |||||    
T  5087233 tgacaattttggcccctttcgtcccaaaattgatgagaagacgccacgtgtcccaaaatagggatcataatcgcaactttttgaaaagataaggggtcaa 5087134  T
Q  416 aagattatatttccct 431  Q
    || || ||||||||||    
T  5087133 aaaatcatatttccct 5087118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 369 - 468
Target Start/End: Complemental strand, 5111623 - 5111525
Alignment:
Q  369 caaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  5111623 caaaaaaggggccataatcgcaactttttgagaagataaggggtcaaaatatcatatttcccttatgtta-ggggtcaaaagaacatattttcctaaaca 5111525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 323 - 468
Target Start/End: Complemental strand, 14624832 - 14624689
Alignment:
Q  323 tttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagatta 422  Q
    |||||||||||| || |||||||||||||||| | |||||||||| ||||||||||| |||||| |||||||||||  ||||||| | ||||||| | ||    
T  14624832 tttgacccattttgtcccaaaattgctgagaacatgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaagggtcaaaa-agta 14624734  T
Q  423 tatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||||||||  ||||||||||| ||||||| ||||||||    
T  14624733 tatttcccttatgtta-tgggtcaaaagagcatattttcctaaaca 14624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 18754336 - 18754484
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||||||| |||| | ||||||||| | ||||||  ||||||||| || |||| | |||||||||||||| |||||  ||||||||| |||||||     
T  18754336 caattttgacccctttcatcccaaaattgatcagaagataccacgtgtcccagaaaatgtgtcataatcgcaacattttgtaaagataaggggtcaaaaa 18754435  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  18754436 ac-atatttcccttatgttagggggtcaaaagagcatatttccctaaaca 18754484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 19195283 - 19195431
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | | ||||||| |||||||||||||| |||| ||||||||||| ||||||| ||||||||||  ||||||||| |||||||     
T  19195283 caattttggcccctttcatccaaaaattgttgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaa- 19195381  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||||| |||||||||| | ||||||||||||||    
T  19195382 aacatatttcccttatgttaggaggtcaaaagagcgtatttccctaaaca 19195431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 319 - 435
Target Start/End: Complemental strand, 7365457 - 7365341
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||||| |||||||||||||||||| | |||||||| ||||| || ||  ||||||||||||||||||||||||||||||||||||     
T  7365457 caattttggcccttttcgtcccaaaattgctgagaagatgtcacgtgtcccaaaacagaggcaataatcgcaactttttgagaagataaggagtcaaaat 7365358  T
Q  419 attatatttcccttatg 435  Q
    || ||||||||||||||    
T  7365357 atcatatttcccttatg 7365341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 369 - 468
Target Start/End: Original strand, 4571463 - 4571562
Alignment:
Q  369 caaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||| ||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  4571463 caaaacaggggccacaatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttatggggtaaaaagagcatatttccctaaaca 4571562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 10023855 - 10024002
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| ||| ||  |||||||||||||||||| ||||||||| |||||| |||| |||| |||||||||||||  ||||||||| |||||||     
T  10023855 caattttggccccttttgtctcaaaattgctgagaagacaccacgtgtcccaaaaa-ggggccatattcgcaactttttgtaaagataaggggtcaaaaa 10023953  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||| |||||||| |||||||||||||| ||||||||||||||||    
T  10023954 aa-atattttccttatgtaagggggtcaaaagagcatatttccctaaaca 10024002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 316 - 468
Target Start/End: Original strand, 15093818 - 15093967
Alignment:
Q  316 tgacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaa 415  Q
    |||||||||||  || ||||||||||||||||||||||||||| |||||| ||||||| | |||  ||||||||||||||||  ||| || ||||  |||    
T  15093818 tgacaattttggtccctttcgttccaaaattgctgagaagacgtcacgtgcctcaaaacatgggctataatcgcaacttttt--gaatat-aggacgcaa 15093914  T
Q  416 aagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||| |||||||||| ||||||||||| |||||| | ||||||||||||||    
T  15093915 aagattttatttcccttttgttagggggttaaaagagcttatttccctaaaca 15093967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 316 - 468
Target Start/End: Complemental strand, 17306002 - 17305850
Alignment:
Q  316 tgacaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaagggg-tcataatcgcaactttttgagaagataaggagtca 414  Q
    |||||||||||  || |||| | ||||||||| |||||||||||||| |||| ||||||||||| |||||||| ||||||||||  || |||||| ||||    
T  17306002 tgacaattttgggccctttcatcccaaaattgatgagaagacgccacatgtcccaaaaaagggggtcataatcacaactttttgtaaaaataaggggtca 17305903  T
Q  415 aaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||| |  ||||||||||||||||||| |||||||||| ||||||| ||||||||    
T  17305902 aaa-agcatatttcccttatgttaggaggtcaaaagagcatattttcctaaaca 17305850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 349 - 468
Target Start/End: Complemental strand, 43251470 - 43251350
Alignment:
Q  349 tgagaagacgcc-acgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaa 447  Q
    |||||||||||| |||||||  |||||| ||||| |||||| |||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  43251470 tgagaagacgcccacgtgtccaaaaaaaagggtcttaatcgtaactttttgagaagataaagagtcaaaagatcatatttcccttatgttagagggtcaa 43251371  T
Q  448 aagaacatatttccctaaaca 468  Q
    ||||  | |||| ||||||||    
T  43251370 aagagtacattttcctaaaca 43251350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 10655563 - 10655416
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||| |||||| |||||||||| || |||| ||||||||||||||||||||||  ||||||||| || ||||     
T  10655563 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaatgggtcataatcgcaactttttgtaaagataaggggttaaaaa 10655464  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||| ||||| ||||||| | |||||| ||||||||||||||||    
T  10655463 a--atatttctcttatattaggggattaaaagagcatatttccctaaaca 10655416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 339 - 468
Target Start/End: Complemental strand, 8527009 - 8526882
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||  || || ||| ||||||| |  |||||||||||||||||    
T  8527009 ccaaaattgctgagaagatgccacgtgtctcaaaaaaggggccataattgcaactttttgtaaaaat-aggggtcaaaa-agcatatttcccttatgtta 8526912  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    || ||||||| || ||||||| ||||||||    
T  8526911 ggaggtcaaatgagcatattttcctaaaca 8526882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 13577856 - 13578003
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||||||||||||||||||||  ||||||||||| ||||||  ||||||||||   |||||| | |||||||     
T  13577856 caattttggcccctttcatcccaaaattgctgagaagacgccacgtgttccaaaaaaggggccataatttcaactttttgtatagataaagggtcaaaa- 13577954  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  13577955 agcatatttcccttatgtta-ggggtcaaaagagcatatttccttaaaca 13578003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 335 - 468
Target Start/End: Complemental strand, 23439812 - 23439679
Alignment:
Q  335 cgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttat 434  Q
    |||| |||| ||| ||||||| ||||||||||| ||||| ||||||||||||||||||||||| | |||||||||  ||||||||  ||||||||||||     
T  23439812 cgttgcaaagttgttgagaagccgccacgtgtcccaaaacaggggtcataatcgcaacttttttaaaagataagggatcaaaagagcatatttcccttaa 23439713  T
Q  435 gttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||| | ||||||| | ||||||||| ||||||    
T  23439712 gttagagagtcaaaatatcatatttccttaaaca 23439679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 335 - 468
Target Start/End: Original strand, 23461107 - 23461240
Alignment:
Q  335 cgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttat 434  Q
    |||| |||| ||| ||||||| ||||||||||| ||||| ||||||||||||||||||||||||| | ||||| |  ||||||||  ||||||| ||||     
T  23461107 cgttgcaaagttgttgagaagccgccacgtgtcccaaaacaggggtcataatcgcaactttttgaaatgataaaggatcaaaagagaatatttctcttaa 23461206  T
Q  435 gttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||| ||||||||| ||||||||||| ||||||    
T  23461207 gttagagggtcaaaataacatatttccttaaaca 23461240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 245 - 462
Target Start/End: Original strand, 24448041 - 24448256
Alignment:
Q  245 tataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaa 344  Q
    ||||||||||||||| ||||||| |||| ||||| |||||||||||||||||| | || ||||        || | ||||||  || |||||||||||||    
T  24448041 tataggctaaactgcacttttcgccccccaagttttaaaatgttgcgattttgatcccctattaaaaaa--tg-cgattttggtccctttcgttccaaaa 24448137  T
Q  345 ttgctgagaagacgccacgtgtctca-aaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttaggggg 443  Q
    |||||||||||||| | |||||| |  ||||||||| ||||||| ||  ||||||  ||||||||| |||| || |  ||||||||||||||||||||||    
T  24448138 ttgctgagaagacgtcgcgtgtcccttaaaaaggggccataatcacatttttttgtaaagataaggggtcataaaaacatatttcccttatgttaggggg 24448237  T
Q  444 tcaaaagaacatatttccc 462  Q
    |||||| | ||||||||||    
T  24448238 tcaaaaaagcatatttccc 24448256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 332 - 468
Target Start/End: Original strand, 44077953 - 44078089
Alignment:
Q  332 tttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaac-tttttgagaagataaggagtcaaaagattatatttccc 430  Q
    |||||| ||||||||||| ||||||||||| ||||| |||||| |  |||||||||||||| ||||||  ||||||||| ||||||| |  ||||||| |    
T  44077953 tttcgtcccaaaattgctaagaagacgccatgtgtcccaaaaaggatgtcataatcgcaacttttttgtaaagataaggggtcaaaa-aacatatttctc 44078051  T
Q  431 ttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  44078052 ttatgttaggaggtcaaaagagcatatttccctaaaca 44078089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 19919693 - 19919814
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    |||||||||||||||| |||| ||||||| |||||||||||  |||||| ||||||||||  ||||||||| ||||||| |  |||||| ||||||||||    
T  19919693 ccaaaattgctgagaaaacgctacgtgtcccaaaaaaggggctataatcacaactttttgtaaagataaggggtcaaaa-aacatattttccttatgtta 19919791  T
Q  439 gggggtcaaaagaacatatttcc 461  Q
    || |||||||||| |||||||||    
T  19919792 ggaggtcaaaagagcatatttcc 19919814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 19493552 - 19493405
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||| |||||||||||||||||||||  |||| ||||| ||||||| | ||||||||||||||||| | |||||||     
T  19493552 caattttggcccctttcatcccaaaatggctgagaagacgccacgtgtcctaaaacaggggccataatcac-actttttgagaagataaagggtcaaaaa 19493454  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    || |||||| |||||||||  |||||||||| | ||||||||| ||||||    
T  19493453 atcatattttccttatgtt-tggggtcaaaatagcatatttccataaaca 19493405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 382 - 468
Target Start/End: Original strand, 9157183 - 9157268
Alignment:
Q  382 ataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||| ||||||||| |||||||||||| ||||||| ||||||||    
T  9157183 ataatcgcaactttttgagaagataagtggtcaaaagatcatatttcacttatgtta-ggggtcaaaagagcatattttcctaaaca 9157268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 335 - 468
Target Start/End: Complemental strand, 23473208 - 23473075
Alignment:
Q  335 cgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttat 434  Q
    |||| |||| ||| ||||||| ||||||||||| ||||| || |||||||||| ||||||||||| ||||||||    |||||||  ||||||||||||     
T  23473208 cgttgcaaagttgttgagaagccgccacgtgtcccaaaacagaggtcataatcacaactttttgaaaagataagataccaaaagagcatatttcccttaa 23473109  T
Q  435 gttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||| ||||||||| |||| |||||| ||||||    
T  23473108 gttagagggtcaaaataacacatttccttaaaca 23473075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 381 - 468
Target Start/End: Complemental strand, 20638663 - 20638577
Alignment:
Q  381 cataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  20638663 cataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaaca 20638577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 381 - 463
Target Start/End: Original strand, 6798014 - 6798095
Alignment:
Q  381 cataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccct 463  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||| ||||||||||| ||||||||| | |||||||||||    
T  6798014 cataatcgcaacttttttagaagataaggggtcaaaagatcatattttccttatgttagagggtcaaaa-atcatatttccct 6798095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 5348315 - 5348161
Alignment:
Q  261 cttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgctgagaagacgcc 360  Q
    |||||||||||||||||| |||||||||| ||||||||  | |||          ||||||||||||||  |||||| |||||||||||||||||||| |    
T  5348315 cttttcgtcccctaagttttaaaatgttgtgattttggcccatta-----aaaaatgacaattttgacctctttcgtcccaaaattgctgagaagacgtc 5348221  T
Q  361 acgtgtctcaaaaaaggggtcataatcgcaac-tttttgagaagataaggagtcaaaaga 419  Q
    || | || ||||| ||| | |||||||||||| ||||| ||||||||||| |||||||||    
T  5348220 acatatcccaaaacaggagccataatcgcaactttttttagaagataaggggtcaaaaga 5348161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 332 - 468
Target Start/End: Original strand, 21225632 - 21225765
Alignment:
Q  332 tttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccct 431  Q
    |||||| | ||||||| |||||||||| |||||||  ||||||| || |||||||||||||||||||  ||||  ||| ||||||  |  ||||||||||    
T  21225632 tttcgtcctaaaattgttgagaagacgtcacgtgttccaaaaaatgg-tcataatcgcaactttttgtaaagacgaggggtcaaat-agcatatttccct 21225729  T
Q  432 tatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  21225730 tatgttagggg-tcaaaagagcatatttccctaaaca 21225765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 338 - 468
Target Start/End: Complemental strand, 3148138 - 3148009
Alignment:
Q  338 tccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtt 437  Q
    |||||||||| |||||||||||| |||||| |||||||||| | ||||| |||| ||||||  ||| ||| | |||||| ||  |||||||| |||| ||    
T  3148138 tccaaaattgttgagaagacgcctcgtgtcccaaaaaagggct-ataattgcaattttttgtaaagttaaagggtcaaaggagcatatttccattatttt 3148040  T
Q  438 agggggtcaaaagaacatatttccctaaaca 468  Q
    ||||| |||||||| ||||| ||||||||||    
T  3148039 aggggatcaaaagagcatatatccctaaaca 3148009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 411 - 468
Target Start/End: Complemental strand, 15681740 - 15681683
Alignment:
Q  411 gtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||    
T  15681740 gtcaaaagatcatagttcccttatgttagggggtcaaaagagcatatttccctaaaca 15681683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 466
Target Start/End: Complemental strand, 47113315 - 47113202
Alignment:
Q  353 aagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaa 452  Q
    ||||||||||||||| ||||| ||||| || ||||||||||||||   ||||||| | | ||||||||  ||||||||| | | ||| ||| |||||||     
T  47113315 aagacgccacgtgtcccaaaacaggggccaaaatcgcaactttttataaagataaagggccaaaagatcttatttccctaaagatagagggccaaaagag 47113216  T
Q  453 catatttccctaaa 466  Q
    ||||||||||||||    
T  47113215 catatttccctaaa 47113202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 422 - 468
Target Start/End: Original strand, 6798086 - 6798132
Alignment:
Q  422 atatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  6798086 atatttcccttatgttagagggtcaaaagagcatatttccctaaaca 6798132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 398
Target Start/End: Original strand, 38722900 - 38722952
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttg 398  Q
    |||||||||| ||||||||||| ||||||||||| || |||||||||||||||    
T  38722900 tgctgagaagccgccacgtgtcccaaaaaaggggccaaaatcgcaactttttg 38722952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 459
Target Start/End: Original strand, 43516977 - 43517091
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggg-gtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggt 444  Q
    |||||||||||||||||||||||||||| |||| |||| ||| | |||||||||  ||||||| | |||| |||| | ||||| ||| | | ||| ||||    
T  43516977 tgctgagaagacgccacgtgtctcaaaacagggtgtcaaaattgaaactttttgtaaagataaagggtcagaagagtttattttcctaaagatagagggt 43517076  T
Q  445 caaaagaacatattt 459  Q
     |||||| |||||||    
T  43517077 taaaagagcatattt 43517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 388
Target Start/End: Complemental strand, 1921093 - 1921040
Alignment:
Q  335 cgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcg 388  Q
    |||| |||| ||||||||||| ||||||||||| ||||||||||| ||||||||    
T  1921093 cgttgcaaagttgctgagaagccgccacgtgtcccaaaaaaggggccataatcg 1921040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 298
Target Start/End: Complemental strand, 43517228 - 43517167
Alignment:
Q  237 tagtttaatataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    |||||| || |||||| || ||| |||||||||| ||||||| |||||||||||||||||||    
T  43517228 tagttttatttaggctgaagtgcacttttcgtccactaagttttaaaatgttgcgattttgg 43517167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 2331323 - 2331271
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggtt 300  Q
    |||||||||||| ||||||| |||||| ||| ||||||||||| |||||||||    
T  2331323 aggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggtt 2331271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 397
Target Start/End: Original strand, 9154398 - 9154446
Alignment:
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaacttttt 397  Q
    ||||||| ||||||||||| || |||||||| |||||||||||||||||    
T  9154398 tgagaagccgccacgtgtcccataaaaggggccataatcgcaacttttt 9154446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 6650543 - 6650602
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttatt 307  Q
    |||||||||||| || |||| |||||||||| |||||| ||||||||||||  |||||||    
T  6650543 aggctaaactgcactgttcgccccctaagttttaaaattttgcgattttggccccttatt 6650602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 23658768 - 23658823
Alignment:
Q  243 aatataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    |||| ||| |||||||| |||||||  ||||||||| |||||||||||||||||||    
T  23658768 aataaaggttaaactgcacttttcgatccctaagttttaaaatgttgcgattttgg 23658823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 417
Target Start/End: Complemental strand, 29051789 - 29051754
Alignment:
Q  382 ataatcgcaactttttgagaagataaggagtcaaaa 417  Q
    |||||||||||||||||||||||||||| |||||||    
T  29051789 ataatcgcaactttttgagaagataaggggtcaaaa 29051754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 397
Target Start/End: Original strand, 46267343 - 46267394
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaacttttt 397  Q
    |||| ||||| |||||| |||| ||||||||||| |||||||||||||||||    
T  46267343 tgcttagaagccgccacatgtcccaaaaaaggggccataatcgcaacttttt 46267394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 48176272 - 48176217
Alignment:
Q  243 aatataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    |||||||||||||||   ||||||| ||||||||||  ||||||||||||||||||    
T  48176272 aatataggctaaactctacttttcgccccctaagtttcaaaatgttgcgattttgg 48176217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 14624607 - 14624657
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    |||||||||| | ||||||||||||||||||  ||||| ||||||||||||    
T  14624607 aggctaaactacacttttcgtcccctaagtttcaaaatattgcgattttgg 14624657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 2331015 - 2331072
Alignment:
Q  250 gctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttatt 307  Q
    |||||||| | |||||||||| ||||||| ||||||||||| |||||||  |||||||    
T  2331015 gctaaacttcacttttcgtcctctaagttttaaaatgttgcaattttggccccttatt 2331072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 17305764 - 17305813
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||| | |||||||||| |||||||  ||||||||||||||||||    
T  17305764 ggctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttgg 17305813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 18754573 - 18754520
Alignment:
Q  246 ataggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggt 299  Q
    ||||| |||||| | ||||||| ||||||||||  |||||||||||||||||||    
T  18754573 ataggttaaactccacttttcgccccctaagtttcaaaatgttgcgattttggt 18754520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 21225576 - 21225633
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttcctt 304  Q
    |||||||||||||  |||||| | |||||||| |||||||||| ||||||||| ||||    
T  21225576 taggctaaactgcaattttcgcctcctaagttttaaaatgttgtgattttggtccctt 21225633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 549
Target Start/End: Original strand, 21225803 - 21225852
Alignment:
Q  500 aaaatcgcaacattttaaacctaaggggcagaaaatgcaatttagccttt 549  Q
    |||||||||||||||||||| |||| |||  |||||||| ||||||||||    
T  21225803 aaaatcgcaacattttaaacttaagtggcgaaaaatgcagtttagccttt 21225852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 24597819 - 24597771
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttg 297  Q
    ||||||||| | ||||||| || ||||||| ||||||||||||||||||    
T  24597819 ggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttg 24597771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 26385261 - 26385313
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggt 299  Q
    ||||||||||||| ||||||||||||||| ||  ||||| ||||| |||||||    
T  26385261 taggctaaactgcacttttcgtcccctaaatttcaaaatattgcgtttttggt 26385313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 414 - 466
Target Start/End: Complemental strand, 39296641 - 39296589
Alignment:
Q  414 aaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaa 466  Q
    |||||| ||||||||| | | ||||| ||||||||||| ||||||||||||||    
T  39296641 aaaagagtatatttccataaagttagagggtcaaaagagcatatttccctaaa 39296589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 86; Significance: 8e-41; HSPs: 2)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 2119 - 2267
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||| |||||||     
T  2119 caattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 2217  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  2218 agcatattgcccttatgttaggaggtcaaaagagcatatttccctaaaca 2267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 2047 - 2097
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    |||||||||||| ||||||| |||||| ||| ||||||||||| |||||||    
T  2047 aggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttgg 2097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 86; Significance: 8e-41; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 19516 - 19369
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| |||||||| | | ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||| |||||||     
T  19516 caattttggcccatttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa- 19418  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  19417 agcatatttcccttatgtta-ggggtcaaaagagcatatttccctaaaca 19369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 62050 - 61900
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaa--ggggtcataatcgcaactttttgagaagataaggagtcaaa 416  Q
    |||||||| ||| |||| | | ||||||| ||||||||||||||||||| |||||||  |||| |||||| |||||||||||  ||||||||| ||||||    
T  62050 caattttggcccctttcatccaaaaattgttgagaagacgccacgtgtcccaaaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaa 61951  T
Q  417 agattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    | |  |||||||||||||||||||  ||||||||| ||||||||||||||||    
T  61950 a-agcatatttcccttatgttaggatgtcaaaagagcatatttccctaaaca 61900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 247 - 468
Target Start/End: Complemental strand, 10229 - 10007
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntga--caattttgacccatttcgttccaaaa 344  Q
    ||||||||||||| ||||||| |||||||||| ||||| |||||||||||||| ||  |||          |  ||||||||  || |||||| ||||||    
T  10229 taggctaaactgcacttttcgacccctaagttttaaaacgttgcgattttggtacccaattaaaaaaaaaaatacaattttggtccctttcgtcccaaaa 10130  T
Q  345 ttgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggt 444  Q
    ||| |||||||||||||| |||| |||||||||||  |||||||||||||||||||||||||||| ||| |||||| |||||| ||||||||||  ||||    
T  10129 ttgttgagaagacgccacatgtcacaaaaaaggggaaataatcgcaactttttgagaagataaggggtctaaagatcatattttccttatgtta-tgggt 10031  T
Q  445 caaaagaacatatttccctaaaca 468  Q
    ||||||| ||||||||||||||||    
T  10030 caaaagagcatatttccctaaaca 10007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 319 - 468
Target Start/End: Original strand, 25034 - 25182
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||    ||||||||| |||||||     
T  25034 caattttggcccctttcataccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcacaacttttgttaaagataaggggtcaaaa- 25132  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  25133 agcatatttcccttatgttagggggtcaaaagagcatatttccctaaaca 25182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 25269 - 25210
Alignment:
Q  248 aggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttatt 307  Q
    |||||||||| |  ||||||||| ||||||| |||||||||||||||||||  |||||||    
T  25269 aggctaaacttcatttttcgtcctctaagttctaaaatgttgcgattttggccccttatt 25210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 49893 - 49745
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||| |||||| |||||||||| || |||||||||||||||||||||||||||  ||||||||| |||||||     
T  49893 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 49795  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||||||||||||||||||||||||||| |||||||||| |||||    
T  49794 aacatatttcccttatgttagggggtcaaaagagcatatttcccgaaaca 49745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 62432 - 62284
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | ||||||||||| |||||| |||||||||| || |||||||||||||||||||||||||||  ||||||||| |||||||     
T  62432 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 62334  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  |||||||||||||||||||||||||||||| |||||||||| |||||    
T  62333 aacatatttcccttatgttagggggtcaaaagagcatatttcccgaaaca 62284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 3658 - 3786
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    ||||||||||||||||||| || |||||| |||||||||||  ||||||| |||||||||  ||||||||| ||||||| |  |||||||||||||||||    
T  3658 ccaaaattgctgagaagacacctcgtgtcccaaaaaaggggctataatcgaaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 3756  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||||| ||||||||||||||||    
T  3757 gggggtcaaaagagcatatttccctaaaca 3786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 5740 - 5867
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    |||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||    
T  5740 ccaaaattgctgcgaagacgccacgtgtcccaaaaaagggc-cataatcgcaactttttgtaaagataaggggtcaaaaaac-atatttcccttatgtta 5837  T
Q  439 gggggtcaaaagaacatatttccctaaaca 468  Q
    || |||||||||| ||||||||||||||||    
T  5838 ggaggtcaaaagagcatatttccctaaaca 5867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 29950 - 29802
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||||| ||||||||||||||||||||||||  ||  ||||  || || |||||| |||||||||||||||||||||| ||||||||    
T  29950 caattttggcccctttcgtcccaaaattgctgagaagacgccacaggttccaaatcagaggccataattgcaactttttgagaagataaggggtcaaaag 29851  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    || ||||||||||||||||| |||||| ||||| |||||||||| |||||    
T  29850 atcatatttcccttatgtta-ggggtccaaagagcatatttccccaaaca 29802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 319 - 518
Target Start/End: Complemental strand, 2225 - 2026
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | | ||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||  |||||| || |||||||     
T  2225 caattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagatatggggtcaaaa- 2127  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaacagtcacttttaccannnnnnnaaata-tgggtcaaaatcgcaacattttaa 517  Q
    |  || |||||||||||||||| |||||||||| |||||||||||||   ||||||||| |||        ||||  |||||||||||||||||||||||    
T  2126 agcatgtttcccttatgttaggaggtcaaaagagcatatttccctaaggggtcacttttgccattttttttaatagggggtcaaaatcgcaacattttaa 2027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 341 - 468
Target Start/End: Original strand, 142039 - 142165
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagg 440  Q
    ||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||  ||||||||  ||||||| |  |||||||||||||||||||    
T  142039 aaaattgcttagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataagaggtcaaaa-agcatatttcccttatgttagg 142137  T
Q  441 gggtcaaaagaacatatttccctaaaca 468  Q
     |||||||||| ||||||||||||||||    
T  142138 aggtcaaaagagcatatttccctaaaca 142165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 141945 - 141994
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttgg 298  Q
    ||||||||||| |||||||||||||| ||| || |||||||| |||||||    
T  141945 ggctaaactgcacttttcgtcccctatgttttataatgttgcaattttgg 141994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 249 - 468
Target Start/End: Original strand, 2961 - 3178
Alignment:
Q  249 ggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaattgc 348  Q
    ||||||| ||| ||||||| |||||| |||  ||||||||||||||||||  || ||||        || |||||||| |||  ||| | |||||||||     
T  2961 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggccccctattaaaaaaa-tggcaattttggcccccttcatcccaaaattga 3059  T
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaa 448  Q
    ||||||||||||||||||| |||||||| || |||||| |||||||||||  ||||||||  ||||||| |  ||||||||||||||||||| |||||||    
T  3060 tgagaagacgccacgtgtcccaaaaaagaggccataattgcaactttttgtaaagataagaggtcaaaa-aacatatttcccttatgttaggaggtcaaa 3158  T
Q  449 agaacatatttccctaaaca 468  Q
    ||| ||||||||||||||||    
T  3159 agagcatatttccctaaaca 3178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 247 - 468
Target Start/End: Original strand, 754 - 975
Alignment:
Q  247 taggctaaactgctcttttcgtcccctaagttataaaatgttgcgattttggttccttattnnnnnnnntgacaattttgacccatttcgttccaaaatt 346  Q
    ||||||||||||| ||||||  ||| ||||||   |||||||||||||||||  || ||||        || |||||||| |||  ||||| ||||||||    
T  754 taggctaaactgcacttttcaccccttaagtttcgaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcgtcccaaaatt 853  T
Q  347 gctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtca 446  Q
    | |||||||||||||  |||| |||| ||||||||||||| |||||||||||  ||||||||| |||||||||  |||||| |||||||||||  |||||    
T  854 gttgagaagacgccagatgtcccaaataaggggtcataattgcaactttttgtaaagataaggggtcaaaagagcatatttaccttatgttagaaggtca 953  T
Q  447 aaagaacatatttccctaaaca 468  Q
    ||| | ||||| ||||||||||    
T  954 aaatagcatatatccctaaaca 975  T

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Target: scaffold0060 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 468
Target Start/End: Complemental strand, 66408 - 66260
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||| |||| | | |||||| |||||||||||||||||||   |||||||||||||||||||||||||||||  ||||||||| |||||||     
T  66408 caattttggcccctttcatccaaaaatttctgagaagacgccacgtgttcaaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 66310  T
Q  419 attatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    |  ||| ||||||||||||||| |||||||| | ||||||||||||||||    
T  66309 agcatagttcccttatgttaggaggtcaaaatagcatatttccctaaaca 66260  T

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Target: scaffold0024 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 43915 - 44042
Alignment:
Q  340 caaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttag 439  Q
    |||||||||||||||||||||||||||| ||||| ||||  |||| ||||||||||||||||||||||   |||||||||| |||||||||||  ||||     
T  43915 caaaattgctgagaagacgccacgtgtcccaaaacagggaccatagtcgcaactttttgagaagataaaaggtcaaaagatcatatttccctttcgtta- 44013  T
Q  440 ggggtcaaaagaacatatttccctaaaca 468  Q
    |||||||||| | ||||||| ||||||||    
T  44014 ggggtcaaaaaagcatattttcctaaaca 44042  T

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Target: scaffold0150 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 339 - 468
Target Start/End: Complemental strand, 6045 - 5917
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtta 438  Q
    |||||||||||||||||| |||||||||| |||||||  ||||||||||||||||||||   ||||||||| ||||||| |  |||||||||||||||||    
T  6045 ccaaaattgctgagaagatgccacgtgtcccaaaaaa-aggtcataatcgcaactttttataaagataaggggtcaaaa-agcatatttcccttatgtta 5948  T
Q  439 -gggggtcaaaagaacatatttccctaaaca 468  Q
     ||||||||||| | ||||||||||||||||    
T  5947 ggggggtcaaaatagcatatttccctaaaca 5917  T

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Target: scaffold0171 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 318 - 420
Target Start/End: Complemental strand, 9268 - 9165
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaa-ggggtcataatcgcaactttttgagaagataaggagtcaaa 416  Q
    ||||||||| ||| |||||| ||||||||||| |||||||| |||||||| ||||||| |||||||||||||||||||||||| ||||||| | ||||||    
T  9268 acaattttggcccctttcgtcccaaaattgcttagaagacgtcacgtgtcccaaaaaagggggtcataatcgcaactttttgaaaagataatgggtcaaa 9169  T
Q  417 agat 420  Q
    ||||    
T  9168 agat 9165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 377 - 468
Target Start/End: Original strand, 1902 - 1992
Alignment:
Q  377 gggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagaacatatttccctaaaca 468  Q
    ||||||||||||||||||||||  ||||||||| ||||||| |  |||||||||||||||||||||||||||| | ||||||||||||||||    
T  1902 gggtcataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttagggggtcaaaatagcatatttccctaaaca 1992  T

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Target: scaffold0007 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 250610 - 250703
Alignment:
Q  341 aaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatg 435  Q
    ||||||||||||||||||||||||| | ||||||||||| ||||||| ||||||||||  ||||||||| ||||||| |  ||||||||||||||    
T  250610 aaaattgctgagaagacgccacgtgccccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaa-aacatatttcccttatg 250703  T

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Target: scaffold0103 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 318 - 466
Target Start/End: Original strand, 2996 - 3144
Alignment:
Q  318 acaattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaagggg-tcataatcgcaactttttgagaagataaggagtcaaa 416  Q
    ||||||||| ||| |||||| | |||||||  ||||||||||||| |||  | | ||||||| |||||||||||||||||||  || |||||| ||||||    
T  2996 acaattttggcccctttcgtcctaaaattgaagagaagacgccacatgttcctagaaagggggtcataatcgcaactttttgtaaaaataaggggtcaaa 3095  T
Q  417 agattatatttcccttatgttagggggtcaaaagaacatatttccctaaa 466  Q
    | |  |||||| |||||||||| |||| ||||| ||||||||| ||||||    
T  3096 atagcatatttaccttatgtta-ggggacaaaaaaacatattttcctaaa 3144  T

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Target: scaffold0474 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 8070 - 8130
Alignment:
Q  339 ccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttga 399  Q
    |||||||||||||||||| |||||||||| ||||| ||||| ||||||||||| |||||||    
T  8070 ccaaaattgctgagaagatgccacgtgtcccaaaacaggggccataatcgcaaatttttga 8130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 319 - 431
Target Start/End: Original strand, 35174 - 35286
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaag 418  Q
    |||||||| ||  ||||||  |||||||| |||||| |||||| ||||||||||||||   |||||||| ||| |||||   ||||||||| ||||||||    
T  35174 caattttggcctctttcgtctcaaaattgttgagaaaacgccatgtgtctcaaaaaagatatcataatcacaagtttttctaaagataaggggtcaaaag 35273  T
Q  419 attatatttccct 431  Q
    | |||||||||||    
T  35274 agtatatttccct 35286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 346 - 431
Target Start/End: Complemental strand, 54576 - 54492
Alignment:
Q  346 tgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaagattatatttccct 431  Q
    |||||||||| |||||| |||| |||||| |||| ||||||||||||||||||  ||||||||| | |||||||  ||||||||||    
T  54576 tgctgagaagccgccacatgtcccaaaaa-ggggccataatcgcaactttttgtaaagataaggggccaaaagagcatatttccct 54492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 389
Target Start/End: Original strand, 5191 - 5261
Alignment:
Q  319 caattttgacccatttcgttccaaaattgctgagaagacgccacgtgtctcaaaaaaggggtcataatcgc 389  Q
    |||||||| ||| |||| | | |||||||||||||||||| || ||||| ||||||||||| |||||||||    
T  5191 caattttggcccctttcatccaaaaattgctgagaagacgtcatgtgtcccaaaaaaggggccataatcgc 5261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 419
Target Start/End: Original strand, 128451 - 128520
Alignment:
Q  349 tgagaagacgccacgtgtctcaaaaaaggggtcataatcgcaactttttgagaagataaggagtcaaaaga 419  Q
    ||||||| ||||||||||  |||||||||||||| ||||||||||||||  | |||||||| |||||||||    
T  128451 tgagaagccgccacgtgttccaaaaaaggggtcaaaatcgcaacttttt-tgtagataaggggtcaaaaga 128520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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