View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0898_high_3 (Length: 357)

Name: NF0898_high_3
Description: NF0898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0898_high_3
NF0898_high_3
[»] chr7 (17 HSPs)
chr7 (9-356)||(36221199-36221548)
chr7 (9-342)||(36226019-36226354)
chr7 (19-342)||(36217228-36217553)
chr7 (115-326)||(35973546-35973757)
chr7 (115-326)||(35994958-35995169)
chr7 (9-164)||(35939465-35939622)
chr7 (43-342)||(35982180-35982475)
chr7 (43-342)||(36003592-36003887)
chr7 (9-179)||(35958123-35958295)
chr7 (47-116)||(35965669-35965738)
chr7 (9-173)||(35946918-35947084)
chr7 (9-121)||(35977578-35977690)
chr7 (9-121)||(35998990-35999102)
chr7 (9-117)||(29602879-29602987)
chr7 (19-119)||(35955182-35955282)
chr7 (46-117)||(29750307-29750378)
chr7 (46-117)||(29743270-29743341)
[»] chr1 (2 HSPs)
chr1 (9-222)||(18125831-18126046)
chr1 (19-89)||(18118197-18118267)
[»] chr4 (1 HSPs)
chr4 (9-117)||(49340545-49340653)


Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 9 - 356
Target Start/End: Complemental strand, 36221548 - 36221199
Alignment:
Q  9 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 108  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36221548 acacacccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 36221449  T
Q  109 ggaataacaca--aatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataa 206  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36221448 ggaataacacacaaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctgtcattctccctcccaataa 36221349  T
Q  207 cacttgaagcatcaacgtatgaatgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagc 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36221348 cacttgaagcatcaacgtatgaatgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcacaagtccaaaccttgtcccgtcagc 36221249  T
Q  307 tgccaccttattcaatctatttctaatctctttgatattattcgacatcc 356  Q
    |||||||||||||||||||| ||||||||||||||| ||||  |||||||    
T  36221248 tgccaccttattcaatctatctctaatctctttgattttatgtgacatcc 36221199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 9 - 342
Target Start/End: Original strand, 36226019 - 36226354
Alignment:
Q  9 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 108  Q
    ||||| ||| |||||||||||||||| |||||| | ||||||||| |||||||||||  |||||||||||||||||||||||||||||||||| ||||||    
T  36226019 acacacccacatcttcaattggaaaagatcatcaaccctcttatcgttgaacaccaattttgcaagtgtggtcttccccaagccaccaattcccactatg 36226118  T
Q  109 ggaata--acacaaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataa 206  Q
    ||||||  ||||||| |||| ||||||||  |||| || |||||||| || ||||||||||| |||||||| || | ||| ||||||||||| || || |    
T  36226119 ggaataacacacaaacttttatcaccatcagcatcaccttgaggatgtggctgcatcaaaagcttgataatatcattcctctcattctcccttcctatca 36226218  T
Q  207 cacttgaagcatcaacgtatgaatgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagc 306  Q
    ||  ||||||||||||||  |||||||| | ||||||| |||||||| || |  |     |||||   |||   |||||||||||||| ||||| |||||    
T  36226219 catctgaagcatcaacgtgggaatgagtcatttctctcttctgcacagcaagtcctaaatcaacactaattgctgcaagtccaaacctagtcccatcagc 36226318  T
Q  307 tgccaccttattcaatctatttctaatctctttgat 342  Q
    ||||||||||||||||||||  ||||||||||||||    
T  36226319 tgccaccttattcaatctatccctaatctctttgat 36226354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 342
Target Start/End: Complemental strand, 36217553 - 36217228
Alignment:
Q  19 atcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacac 118  Q
    ||||||||||| ||||  ||||||||||||||||||||| |||||||  |||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  36217553 atcttcaattgaaaaacttcatctatcctcttatcattgtacaccaattttgcaagtgtggtcttccccaatcctccaattcccactatgggaataacac 36217454  T
Q  119 --aaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaagc 216  Q
      ||| || | | ||||| |||||  || |||||||  |  | ||||||||| | ||||||| ||||| | ||||||||||| || |||||||||||| |    
T  36217453 ataaacttctatgaccatttccataaccttgaggatcggaatccatcaaaagctcgataattgcttccttgtcattctcccttcctataacacttgaaac 36217354  T
Q  217 atcaacgtatgaatgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccacctta 316  Q
    |||||  |  ||||  |||| ||||||  | ||||||  | |  | ||  ||||||  |||||| ||||||||||| | ||||| ||||||||||| |||    
T  36217353 atcaatatgggaataggtgatttctctattgtgcacagaaagtccgggctcaacatgaattctcacaagtccaaacttggtcccatcagctgccacttta 36217254  T
Q  317 ttcaatctatttctaatctctttgat 342  Q
    | |||||||| |||||||||||||||    
T  36217253 tccaatctatctctaatctctttgat 36217228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 115 - 326
Target Start/End: Original strand, 35973546 - 35973757
Alignment:
Q  115 acacaaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaa 214  Q
    ||||||| |||| ||||| |||||||| || |||||| | |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35973546 acacaaacttttatcaccgtctccatcaccttgaggacgtggttgcatcagaagcttgataatttcttccctatcattctccctcccaataacacttgaa 35973645  T
Q  215 gcatcaacgtatgaatgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccacct 314  Q
    ||||| || |  |||| ||| ||||||||||| |||| |||| | |||||  ||   |||||| ||||||| |||||| |  |||| || ||||| ||||    
T  35973646 gcatcgacatgggaattagtcaattctctcctatgcaaaacaagttcaggaccattgtcgattttcgcaagaccaaacttgttcccatcggctgctacct 35973745  T
Q  315 tattcaatctat 326  Q
    ||| ||| ||||    
T  35973746 tatccaacctat 35973757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 115 - 326
Target Start/End: Original strand, 35994958 - 35995169
Alignment:
Q  115 acacaaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaa 214  Q
    ||||||| |||| ||||| |||||||| || |||||| | |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35994958 acacaaacttttatcaccgtctccatcaccttgaggacgtggttgcatcagaagcttgataatttcttccctatcattctccctcccaataacacttgaa 35995057  T
Q  215 gcatcaacgtatgaatgagtgaattctctcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccacct 314  Q
    ||||| || |  |||| ||| ||||||||||| |||| |||| | |||||  ||   |||||| ||||||| |||||| |  |||| || ||||| ||||    
T  35995058 gcatcgacatgggaattagtcaattctctcctatgcaaaacaagttcaggaccattgtcgattttcgcaagaccaaacttgttcccatcggctgctacct 35995157  T
Q  315 tattcaatctat 326  Q
    ||| ||| ||||    
T  35995158 tatccaacctat 35995169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 35939465 - 35939622
Alignment:
Q  9 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 108  Q
    ||||| ||| ||||||||||||||||  | ||  | |||||||||||||||||||||| ||||||||||||||||||| || || |||||||| || |||    
T  35939465 acacaaccacatcttcaattggaaaagttgattcaccctcttatcattgaacaccaactttgcaagtgtggtcttccctaatcctccaattcccacaatg 35939564  T
Q  109 ggaataacac--aaatttttgtcaccatctccatctccatgaggatgcggttgcatca 164  Q
    ||||||||||  ||| |||| |||||||| ||||| || |||||||| ||||||||||    
T  35939565 ggaataacacataaacttttatcaccatcaccatcaccgtgaggatgtggttgcatca 35939622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 43 - 342
Target Start/End: Original strand, 35982180 - 35982475
Alignment:
Q  43 atcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacacaaatttttgtcaccatctccatct 142  Q
    ||||||| ||||||||| |||||  |||||||||| ||||| ||||| || |||||||| || |||||||||||||| |   || |    ||| |||||     
T  35982180 atcctctcatcattgaaaaccaattttgcaagtgtagtctttcccaaacctccaattcccacaatgggaataacacataagctttt----atcaccatca 35982275  T
Q  143 ccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaagcatcaacgtatgaatgagtgaattctc 242  Q
    || |||||||| ||| |||||||||| ||||||||||| |||||||| ||||| || || || |||    |||||||||| |  |||||||| |||||||    
T  35982276 ccttgaggatgtggtagcatcaaaagcttgataatttcatccctatccttctctcttcctatcacatccaaagcatcaacatgggaatgagtcaattctc 35982375  T
Q  243 tcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccaccttattcaatctatttctaatctctttgat 342  Q
    |  | ||||||| | |  ||||  ||||||| ||||||  |||||||||| | ||||| ||||||||||||||||  |||||||| ||||| ||||||||    
T  35982376 ttttttgcacaatatgtccaggatcaacatcaattctcataagtccaaacttagtcccatcagctgccaccttatctaatctattcctaatttctttgat 35982475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 43 - 342
Target Start/End: Original strand, 36003592 - 36003887
Alignment:
Q  43 atcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacacaaatttttgtcaccatctccatct 142  Q
    ||||||| ||||||||| |||||  |||||||||| ||||| ||||| || |||||||| || |||||||||||||| |   || |    ||| |||||     
T  36003592 atcctctcatcattgaaaaccaattttgcaagtgtagtctttcccaaacctccaattcccacaatgggaataacacataagctttt----atcaccatca 36003687  T
Q  143 ccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataacacttgaagcatcaacgtatgaatgagtgaattctc 242  Q
    || |||||||| ||| |||||||||| ||||||||||| |||||||| ||||| || || || |||    |||||||||| |  |||||||| |||||||    
T  36003688 ccttgaggatgtggtagcatcaaaagcttgataatttcatccctatccttctctcttcctatcacatccaaagcatcaacatgggaatgagtcaattctc 36003787  T
Q  243 tcctctgcacaacaggatcaggtgcaacatcgattctcgcaagtccaaaccttgtcccgtcagctgccaccttattcaatctatttctaatctctttgat 342  Q
    |  | ||||||| | |  ||||  ||||||| ||||||  |||||||||| | ||||| ||||||||||||||||  |||||||| ||||| ||||||||    
T  36003788 ttttttgcacaatatgtccaggatcaacatcaattctcataagtccaaacttagtcccatcagctgccaccttatctaatctattcctaatttctttgat 36003887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 35958123 - 35958295
Alignment:
Q  9 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 108  Q
    ||||| ||| |||||||| |||||||  | ||| ||||||||||||||||||||| || |||||||||| ||||| ||||| || |||||||| |||||     
T  35958123 acacacccacatcttcaactggaaaagttgatccatcctcttatcattgaacaccgactttgcaagtgttgtctttcccaaacctccaattcccactatt 35958222  T
Q  109 ggaataacac--aaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataattt 179  Q
    ||||| ||||  | | | || |||||||| ||||||||  ||||||| || ||||||||||| ||||||||||    
T  35958223 ggaatgacacagagactattatcaccatcaccatctccgcgaggatgtggctgcatcaaaagattgataattt 35958295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 35965669 - 35965738
Alignment:
Q  47 tcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataac 116  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||| | ||||||||||||    
T  35965669 tcttatcattgaacaccaagtttgcaagtgtggtcttccccaagccaccaattcctagtatgggaataac 35965738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 35946918 - 35947084
Alignment:
Q  9 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 108  Q
    ||||| ||| |||||||| |||||||  | || |||||||||||||||||||||| || | |||||||||||||||| ||| || |||||||| |||||     
T  35946918 acacacccacatcttcaactggaaaagttgatgtatcctcttatcattgaacaccgacttcgcaagtgtggtcttccacaaacctccaattcccactatt 35947017  T
Q  109 ggaataacac--aaatttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttga 173  Q
    ||||| ||||  | | | || |||||||| ||||| || |||||||| || ||||||||||| ||||    
T  35947018 ggaatgacacagagactattatcaccatcaccatcgccgtgaggatgtggctgcatcaaaagattga 35947084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 35977578 - 35977690
Alignment:
Q  9 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 108  Q
    ||||| ||| |||||||| |||||||  | ||| ||||||||||||||||||||| || ||||||  |||||||||||||| || |||||||| |||||     
T  35977578 acacacccacatcttcaactggaaaagttgatccatcctcttatcattgaacaccgactttgcaatggtggtcttccccaaacctccaattcccactatt 35977677  T
Q  109 ggaataacacaaa 121  Q
    ||||| |||||||    
T  35977678 ggaatgacacaaa 35977690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 35998990 - 35999102
Alignment:
Q  9 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 108  Q
    ||||| ||| |||||||| |||||||  | ||| ||||||||||||||||||||| || ||||||  |||||||||||||| || |||||||| |||||     
T  35998990 acacacccacatcttcaactggaaaagttgatccatcctcttatcattgaacaccgactttgcaatggtggtcttccccaaacctccaattcccactatt 35999089  T
Q  109 ggaataacacaaa 121  Q
    ||||| |||||||    
T  35999090 ggaatgacacaaa 35999102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 29602879 - 29602987
Alignment:
Q  9 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 108  Q
    ||||| ||| ||||| ||| ||||| | || ||||  ||||||||||||||||||  | |||||||||| ||||| |||||||| ||||||||||| ||     
T  29602879 acacacccacatctttaatgggaaagtctcgtctaaactcttatcattgaacaccgtctttgcaagtgtagtctttcccaagcctccaattccaacaata 29602978  T
Q  109 ggaataaca 117  Q
    |||||||||    
T  29602979 ggaataaca 29602987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 35955182 - 35955282
Alignment:
Q  19 atcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataacac 118  Q
    |||||||||| |||||| | ||| | ||| | |||||||||||| ||| |||||||||||||||| ||||| || ||||| || | ||||||||||||||    
T  35955182 atcttcaatttgaaaatttgatccaccctttcatcattgaacactaactttgcaagtgtggtctttcccaatcctccaatacctattatgggaataacac 35955281  T
Q  119 a 119  Q
    |    
T  35955282 a 35955282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 29750378 - 29750307
Alignment:
Q  46 ctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataaca 117  Q
    ||||||||||||||||||  | |||||||||| ||||| |||||||| ||||||||||| || |||||||||    
T  29750378 ctcttatcattgaacaccgtctttgcaagtgtagtctttcccaagcctccaattccaacaataggaataaca 29750307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 29743341 - 29743270
Alignment:
Q  46 ctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatgggaataaca 117  Q
    |||||||||||||||||   | ||||||| || ||||| |||||||| ||||||||||| || |||||||||    
T  29743341 ctcttatcattgaacactgtctttgcaagcgtagtctttcccaagcctccaattccaacaataggaataaca 29743270  T

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Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 18125831 - 18126046
Alignment:
Q  9 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 108  Q
    ||||| ||| ||||||||||| || |  |||||||| |||||||||||||| || | | |||| | ||||||||||||||||||||||||||| || |||    
T  18125831 acacacccacatcttcaattgaaagagttcatctattctcttatcattgaaaacaagctttgccaatgtggtcttccccaagccaccaattcccaccatg 18125930  T
Q  109 ggaataacacaaat--ttttgtcaccatctccatctccatgaggatgcggttgcatcaaaagtttgataatttcttccctatcattctccctcccaataa 206  Q
    ||||||||| | |   |||| |||||||| ||||| ||||||||||| | |||||||||||| |||||||| |||||||||||| |||| || || || |    
T  18125931 ggaataacagatagacttttatcaccatcaccatcaccatgaggatgtgcttgcatcaaaagcttgataatctcttccctatcactctctcttcctatta 18126030  T
Q  207 cacttgaagcatcaac 222  Q
    ||||  ||||||||||    
T  18126031 cactcaaagcatcaac 18126046  T

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Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 18118197 - 18118267
Alignment:
Q  19 atcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaa 89  Q
    ||||||||||| ||||  ||||| ||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  18118197 atcttcaattgaaaaaattcatcgatcctcttatcgttgaataccaactttgcaagtgtggtcttccccaa 18118267  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 49340653 - 49340545
Alignment:
Q  9 acacatccaaatcttcaattggaaaatatcatctatcctcttatcattgaacaccaaccttgcaagtgtggtcttccccaagccaccaattccaactatg 108  Q
    ||||| ||| ||||||||| | ||| | |||||||  ||||||||||| ||||| | | |||||||||| || || || || || ||||||||||| ||     
T  49340653 acacacccacatcttcaatggaaaagtctcatctaaactcttatcattaaacacgacctttgcaagtgtagtttttcctaatcctccaattccaacaata 49340554  T
Q  109 ggaataaca 117  Q
    |||||||||    
T  49340553 ggaataaca 49340545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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