View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0898_high_7 (Length: 274)
Name: NF0898_high_7
Description: NF0898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0898_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 53 - 236
Target Start/End: Complemental strand, 23025548 - 23025365
Alignment:
| Q |
53 |
gagaggaggctagaaacctactgacctcaacagacctgaaatattatcagagaatcaagttcaggaccgccaactcaaccggtttcaaagcaacccttgc |
152 |
Q |
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| T |
23025548 |
gagaggagtctagaaacctattgacctcaacagacctgaaatattatcagagaatcaagttcaggaccgccaactcaaccggtttcaaagcaacccttac |
23025449 |
T |
|
| Q |
153 |
aggtttaaaggaacaggcccttttcgggtttacaaattcacaccaccgcaaaaaagctacgtctaataccacctaaaatctctg |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23025448 |
aggtttaaaggaacaggcccttttcgggtttacaaaggcacaccaccgcaaaaaagctacgtctaataccacctaaaatctctg |
23025365 |
T |
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